View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8606A_low_136 (Length: 268)
Name: NF8606A_low_136
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8606A_low_136 |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 38322857 - 38322596
Alignment:
| Q |
1 |
agaaactctttctatcacttcaatctctgaaggatggactttagattctgaaattgaggcatttatttgagcatcactttcgacaagtcgatatcctttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38322857 |
agaaactctttctatcacttcaatctctgaaggatggactttagattctgaaattgaggcatttatttgagcattactttcgacaagtcgatatcctttg |
38322758 |
T |
|
| Q |
101 |
ttttctttcagctgcacaaatacattcaacattatttgctactattaattaataagatcataagttcataaatatgattacattgaccatttagtataga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
38322757 |
ttttctttcagctgcacaaatacattcaacattatttgctactattaattaataagatcataagttcataaatatgattacattgaccatatagtataga |
38322658 |
T |
|
| Q |
201 |
aaaatgaacctgcactttttgccaatcagggttgtactttatggctaacacattttcttgga |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
38322657 |
aaaatgaacctgcactttttgccaatcagggttgtactttatggctaacacattttgttgga |
38322596 |
T |
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