View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8606A_low_151 (Length: 259)
Name: NF8606A_low_151
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8606A_low_151 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 29007614 - 29007362
Alignment:
| Q |
1 |
acaaccaaatttgaaagtgtaaacagaaacactaaaacacgtgtattacacgattgattaactaacttcaaatgaactaccttagaatggacacaaaatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
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| T |
29007614 |
acaaccaaatttgaaagtgtaaacagaaacactaaaacacgtgtattacacgattgattaactaacttcaaatgaactacctcagaatggacataaaatc |
29007515 |
T |
|
| Q |
101 |
aaatttatcttaattttaaaaaagcataatagaatctaaccttccaagattgttgaccattgtaagcataaacaaaacgagctctcttaacatcttcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29007514 |
aaatttatcttaattttaaaaaagcataatagaatctaaccttccaagattgttgaccattgtaagcataaacaaaacgagctctcttaacatcttcaaa |
29007415 |
T |
|
| Q |
201 |
cacgttcttgttctcaccttcacaaaggaaatacacagttgaagtcactttta |
253 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
29007414 |
cacgttcttgttctccccttcacaaaggaaatacacagttgaagtcactttta |
29007362 |
T |
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