View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8606A_low_192 (Length: 248)
Name: NF8606A_low_192
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8606A_low_192 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 27560804 - 27560645
Alignment:
| Q |
8 |
tttgtgtgatattaagggacaaacatgtacatgacacatgggtgcatctaaaagattttaaataatgactttaattttctttttatggctttcttacaag |
107 |
Q |
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| T |
27560804 |
tttgtgtgatattaagggacaaacatgtacatgacacatgggtgcatctaaaagattttaaataatgactttaattttctttttatggctttcttacaag |
27560705 |
T |
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| Q |
108 |
tgctaaaacaattcattgcaacatttaatgtttgttacatctattggagaataataagac |
167 |
Q |
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| T |
27560704 |
tgctaaaacaattcattgcaacatttaatgtttgttacatctaatggagaataataagac |
27560645 |
T |
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