View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8606A_low_219 (Length: 242)
Name: NF8606A_low_219
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8606A_low_219 |
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Alignment Details
Target: chr4 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 46953650 - 46953838
Alignment:
| Q |
1 |
gtgtttgtcttggtctatttttacaagttttgtttagcaactgagaaaatcaaaatgcatgtgtcactgcccagggatcaaaaacactaagataaacatt |
100 |
Q |
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| T |
46953650 |
gtgtttgtcttggtctatttttacaagttttgtttagcaactgagaaaatcaaaatgcatgtgtcactgcccagggatcaaaaacaataagataagcatt |
46953749 |
T |
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| Q |
101 |
aatcctccatggaggaaacttgcaattaggtggaaaaactaccagctaggaattttctatgaactactaatcctcatccagtgtgaagt |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46953750 |
aatcctccatggaggaaacttgcaattaggtggaaaaactaccagctaggaattttctatgaactactaatcctcatccagtgtgaagt |
46953838 |
T |
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