View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8606A_low_229 (Length: 240)

Name: NF8606A_low_229
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8606A_low_229
NF8606A_low_229
[»] chr2 (41 HSPs)
chr2 (84-234)||(19456511-19456661)
chr2 (84-234)||(21703254-21703404)
chr2 (84-234)||(34303393-34303543)
chr2 (87-234)||(27392973-27393120)
chr2 (84-234)||(3784655-3784805)
chr2 (84-234)||(16163600-16163750)
chr2 (84-234)||(34157012-34157162)
chr2 (84-234)||(27118689-27118839)
chr2 (84-206)||(31891446-31891568)
chr2 (84-206)||(28882215-28882337)
chr2 (84-206)||(12655543-12655665)
chr2 (84-206)||(23128684-23128806)
chr2 (84-234)||(27434534-27434684)
chr2 (84-227)||(11635283-11635426)
chr2 (84-206)||(20837919-20838041)
chr2 (84-206)||(21677300-21677422)
chr2 (84-227)||(11641472-11641615)
chr2 (84-227)||(22926125-22926268)
chr2 (84-227)||(34279450-34279593)
chr2 (87-234)||(40233515-40233662)
chr2 (84-227)||(34286355-34286498)
chr2 (84-227)||(34291415-34291558)
chr2 (84-206)||(34861681-34861803)
chr2 (84-206)||(37686027-37686149)
chr2 (84-206)||(37701292-37701414)
chr2 (84-206)||(37925494-37925616)
chr2 (84-206)||(31876282-31876404)
chr2 (85-227)||(37375163-37375305)
chr2 (87-184)||(13936684-13936781)
chr2 (84-206)||(16829456-16829578)
chr2 (84-206)||(16891903-16892025)
chr2 (84-206)||(32049799-32049921)
chr2 (84-206)||(39890075-39890197)
chr2 (87-184)||(12716742-12716839)
chr2 (87-184)||(27777226-27777323)
chr2 (87-184)||(27803711-27803808)
chr2 (87-184)||(27816984-27817081)
chr2 (87-184)||(39051962-39052059)
chr2 (93-227)||(260850-260984)
chr2 (87-184)||(9350122-9350219)
chr2 (87-184)||(12586814-12586911)
[»] chr1 (7 HSPs)
chr1 (84-227)||(20461085-20461228)
chr1 (84-234)||(16208132-16208282)
chr1 (84-234)||(20340436-20340586)
chr1 (84-234)||(28151866-28152016)
chr1 (84-227)||(41793416-41793559)
chr1 (84-206)||(28584985-28585107)
chr1 (84-206)||(10962674-10962796)
[»] chr7 (33 HSPs)
chr7 (84-234)||(16449985-16450135)
chr7 (84-234)||(16041329-16041479)
chr7 (84-234)||(26484700-26484850)
chr7 (84-234)||(2108992-2109142)
chr7 (84-234)||(2775365-2775515)
chr7 (84-234)||(31088451-31088601)
chr7 (84-234)||(39211010-39211160)
chr7 (84-234)||(45733466-45733616)
chr7 (84-226)||(18540805-18540947)
chr7 (84-206)||(11424791-11424913)
chr7 (84-227)||(5127998-5128141)
chr7 (84-206)||(10916883-10917005)
chr7 (84-206)||(16503395-16503517)
chr7 (84-206)||(16518431-16518553)
chr7 (84-227)||(5147334-5147477)
chr7 (84-206)||(2154579-2154701)
chr7 (84-227)||(16736454-16736597)
chr7 (84-227)||(16751508-16751651)
chr7 (84-227)||(17523538-17523681)
chr7 (84-227)||(17529534-17529677)
chr7 (84-206)||(4145138-4145260)
chr7 (84-206)||(9618657-9618779)
chr7 (84-206)||(26275109-26275231)
chr7 (84-206)||(26319884-26320006)
chr7 (84-206)||(45387349-45387471)
chr7 (87-206)||(3445315-3445434)
chr7 (84-227)||(26435263-26435406)
chr7 (84-206)||(26669929-26670051)
chr7 (85-206)||(31564405-31564526)
chr7 (87-206)||(26537885-26538004)
chr7 (93-206)||(11441587-11441700)
chr7 (85-206)||(31124927-31125048)
chr7 (84-226)||(5159525-5159667)
[»] scaffold0558 (1 HSPs)
scaffold0558 (84-234)||(129-279)
[»] chr4 (24 HSPs)
chr4 (84-234)||(15227890-15228040)
chr4 (84-234)||(15285029-15285179)
chr4 (84-234)||(1900277-1900427)
chr4 (84-234)||(24460706-24460856)
chr4 (87-234)||(15391439-15391586)
chr4 (84-234)||(14235626-14235776)
chr4 (84-227)||(17014020-17014163)
chr4 (84-227)||(14763412-14763555)
chr4 (84-206)||(24592443-24592565)
chr4 (84-206)||(14098561-14098683)
chr4 (84-206)||(14665038-14665160)
chr4 (84-227)||(5005893-5006036)
chr4 (84-227)||(6569873-6570016)
chr4 (84-206)||(27163446-27163568)
chr4 (85-206)||(18800742-18800863)
chr4 (87-206)||(30753777-30753896)
chr4 (84-206)||(31126647-31126769)
chr4 (87-227)||(33673906-33674046)
chr4 (85-227)||(36344623-36344765)
chr4 (84-206)||(40105767-40105889)
chr4 (84-226)||(24112682-24112824)
chr4 (84-226)||(34189069-34189211)
chr4 (85-227)||(54833408-54833550)
chr4 (87-184)||(39850661-39850758)
[»] scaffold0124 (2 HSPs)
scaffold0124 (84-234)||(20393-20543)
scaffold0124 (159-206)||(30532-30579)
[»] chr3 (60 HSPs)
chr3 (84-234)||(16626648-16626798)
chr3 (84-234)||(18530354-18530504)
chr3 (84-234)||(4625910-4626060)
chr3 (84-234)||(31034259-31034409)
chr3 (84-234)||(32292718-32292868)
chr3 (84-234)||(17993926-17994076)
chr3 (84-234)||(5652353-5652503)
chr3 (84-206)||(15892876-15892998)
chr3 (84-206)||(8295938-8296060)
chr3 (84-206)||(8301437-8301559)
chr3 (84-206)||(18330635-18330757)
chr3 (84-227)||(4721597-4721740)
chr3 (84-227)||(22387727-22387870)
chr3 (84-206)||(4796823-4796945)
chr3 (84-206)||(15741264-15741386)
chr3 (84-206)||(17985126-17985248)
chr3 (84-206)||(18051228-18051350)
chr3 (85-206)||(6542632-6542753)
chr3 (84-227)||(5609471-5609614)
chr3 (84-227)||(6192282-6192425)
chr3 (84-227)||(18277201-18277344)
chr3 (84-227)||(18292502-18292645)
chr3 (84-227)||(18307803-18307946)
chr3 (84-227)||(28339268-28339411)
chr3 (84-227)||(29148904-29149047)
chr3 (84-227)||(31964622-31964765)
chr3 (84-227)||(50134220-50134363)
chr3 (84-206)||(35880732-35880854)
chr3 (84-227)||(4416885-4417028)
chr3 (87-206)||(5713196-5713315)
chr3 (87-206)||(5724106-5724225)
chr3 (87-206)||(5757252-5757371)
chr3 (87-206)||(5768143-5768262)
chr3 (84-227)||(10396099-10396242)
chr3 (84-227)||(28116103-28116246)
chr3 (87-206)||(36997247-36997366)
chr3 (84-206)||(7996528-7996650)
chr3 (84-206)||(10643036-10643158)
chr3 (84-206)||(47023419-47023541)
chr3 (84-227)||(7073178-7073321)
chr3 (84-227)||(21674659-21674802)
chr3 (87-227)||(11110498-11110638)
chr3 (84-227)||(4346836-4346979)
chr3 (85-206)||(18242706-18242827)
chr3 (86-206)||(5466953-5467073)
chr3 (87-227)||(48465896-48466036)
chr3 (84-227)||(22871005-22871148)
chr3 (84-227)||(22886064-22886207)
chr3 (84-227)||(28021241-28021384)
chr3 (147-206)||(51782052-51782111)
chr3 (84-226)||(4893176-4893318)
chr3 (93-206)||(5013687-5013800)
chr3 (85-206)||(5596527-5596648)
chr3 (87-184)||(20577039-20577136)
chr3 (87-184)||(29665162-29665259)
chr3 (85-184)||(20066010-20066109)
chr3 (147-198)||(51797141-51797192)
chr3 (93-227)||(8211713-8211847)
chr3 (84-206)||(18225157-18225279)
chr3 (84-226)||(32439120-32439262)
[»] scaffold0260 (1 HSPs)
scaffold0260 (84-234)||(2759-2909)
[»] chr5 (49 HSPs)
chr5 (84-234)||(22888484-22888634)
chr5 (84-234)||(25199043-25199193)
chr5 (84-234)||(23892220-23892370)
chr5 (84-234)||(13184646-13184796)
chr5 (84-234)||(33877261-33877411)
chr5 (84-234)||(11325808-11325958)
chr5 (84-234)||(13440492-13440642)
chr5 (84-234)||(29889080-29889230)
chr5 (84-227)||(23752455-23752598)
chr5 (84-206)||(11549368-11549490)
chr5 (84-206)||(23718014-23718136)
chr5 (84-206)||(30934647-30934769)
chr5 (84-206)||(24688183-24688305)
chr5 (84-206)||(24970032-24970154)
chr5 (84-227)||(33777501-33777644)
chr5 (84-206)||(2511065-2511187)
chr5 (84-206)||(8665501-8665623)
chr5 (84-206)||(15758883-15759005)
chr5 (84-227)||(6874319-6874462)
chr5 (84-227)||(9548548-9548691)
chr5 (84-227)||(22999119-22999262)
chr5 (84-206)||(26480406-26480528)
chr5 (85-227)||(37671488-37671630)
chr5 (84-227)||(15658765-15658908)
chr5 (84-227)||(41674723-41674866)
chr5 (84-206)||(5637924-5638046)
chr5 (84-206)||(9317465-9317587)
chr5 (84-206)||(12132169-12132291)
chr5 (85-227)||(18500735-18500877)
chr5 (85-227)||(28649250-28649392)
chr5 (84-206)||(30152032-30152154)
chr5 (84-206)||(30168483-30168605)
chr5 (84-206)||(34616532-34616654)
chr5 (93-206)||(31431463-31431576)
chr5 (87-206)||(31826433-31826552)
chr5 (84-206)||(18375438-18375560)
chr5 (84-206)||(28959812-28959934)
chr5 (85-227)||(37770992-37771134)
chr5 (85-206)||(37358669-37358790)
chr5 (84-227)||(32599477-32599620)
chr5 (85-206)||(3789556-3789677)
chr5 (85-206)||(37754995-37755116)
chr5 (87-227)||(43078269-43078409)
chr5 (84-226)||(33292539-33292681)
chr5 (84-206)||(33516370-33516492)
chr5 (87-184)||(24681457-24681554)
chr5 (87-184)||(24723984-24724081)
chr5 (87-184)||(40473597-40473694)
chr5 (85-226)||(13324835-13324976)
[»] chr6 (46 HSPs)
chr6 (84-234)||(22456978-22457128)
chr6 (84-234)||(22477317-22477467)
chr6 (84-234)||(27290414-27290564)
chr6 (84-234)||(8892354-8892504)
chr6 (84-234)||(8903589-8903739)
chr6 (84-234)||(13522117-13522267)
chr6 (84-234)||(14143329-14143479)
chr6 (84-234)||(26787946-26788096)
chr6 (84-234)||(27196319-27196469)
chr6 (84-234)||(27252771-27252921)
chr6 (84-234)||(33374300-33374450)
chr6 (84-234)||(28162659-28162809)
chr6 (85-232)||(20160704-20160851)
chr6 (85-232)||(22171980-22172127)
chr6 (84-234)||(22934924-22935074)
chr6 (84-234)||(23857369-23857519)
chr6 (87-234)||(27272624-27272771)
chr6 (84-227)||(26918382-26918525)
chr6 (84-206)||(13299023-13299145)
chr6 (84-206)||(24304690-24304812)
chr6 (84-206)||(26989003-26989125)
chr6 (84-227)||(16749856-16749999)
chr6 (84-206)||(15424389-15424511)
chr6 (84-206)||(24863719-24863841)
chr6 (84-206)||(27000075-27000197)
chr6 (85-206)||(4525289-4525410)
chr6 (84-227)||(29549477-29549620)
chr6 (85-206)||(4773009-4773130)
chr6 (87-206)||(3696086-3696205)
chr6 (84-206)||(29573015-29573137)
chr6 (93-206)||(4545847-4545960)
chr6 (93-206)||(4724206-4724319)
chr6 (85-206)||(4757767-4757888)
chr6 (93-206)||(28207465-28207578)
chr6 (87-227)||(16674144-16674284)
chr6 (87-227)||(34463397-34463537)
chr6 (85-227)||(27007730-27007872)
chr6 (85-227)||(27044390-27044532)
chr6 (85-206)||(27485132-27485253)
chr6 (84-206)||(26777687-26777809)
chr6 (84-206)||(30558088-30558210)
chr6 (85-206)||(26116482-26116603)
chr6 (85-206)||(27360064-27360185)
chr6 (85-206)||(27450407-27450528)
chr6 (85-206)||(29501418-29501539)
chr6 (85-184)||(17025280-17025379)
[»] chr8 (21 HSPs)
chr8 (84-234)||(44563106-44563256)
chr8 (84-234)||(9354627-9354777)
chr8 (84-234)||(19659099-19659249)
chr8 (87-234)||(22080938-22081085)
chr8 (84-234)||(33244670-33244820)
chr8 (84-234)||(16283454-16283604)
chr8 (84-206)||(16277559-16277681)
chr8 (84-206)||(2137347-2137469)
chr8 (84-206)||(19688103-19688225)
chr8 (84-206)||(27608993-27609115)
chr8 (84-227)||(31354529-31354672)
chr8 (84-206)||(14557629-14557751)
chr8 (84-206)||(19208448-19208570)
chr8 (84-206)||(31489838-31489960)
chr8 (84-227)||(19674446-19674589)
chr8 (84-206)||(28362043-28362165)
chr8 (85-206)||(3329595-3329716)
chr8 (84-227)||(18710591-18710734)
chr8 (85-206)||(12092812-12092933)
chr8 (85-227)||(19286468-19286610)
chr8 (85-207)||(29829328-29829450)
[»] scaffold0109 (1 HSPs)
scaffold0109 (87-234)||(21569-21716)
[»] scaffold0415 (2 HSPs)
scaffold0415 (149-234)||(2018-2103)
scaffold0415 (147-227)||(6080-6160)
[»] scaffold0143 (1 HSPs)
scaffold0143 (84-206)||(27297-27419)
[»] scaffold0089 (3 HSPs)
scaffold0089 (84-206)||(29768-29890)
scaffold0089 (84-206)||(40198-40320)
scaffold0089 (84-206)||(47114-47236)
[»] scaffold0159 (2 HSPs)
scaffold0159 (84-206)||(9195-9317)
scaffold0159 (84-206)||(20020-20142)
[»] scaffold0029 (1 HSPs)
scaffold0029 (84-206)||(258-381)
[»] scaffold0350 (1 HSPs)
scaffold0350 (84-206)||(7368-7490)
[»] scaffold0144 (1 HSPs)
scaffold0144 (84-199)||(26338-26453)
[»] scaffold0237 (1 HSPs)
scaffold0237 (84-206)||(15059-15181)
[»] scaffold0038 (1 HSPs)
scaffold0038 (93-206)||(7963-8076)
[»] scaffold0336 (1 HSPs)
scaffold0336 (84-227)||(9571-9714)


Alignment Details
Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 19456661 - 19456511
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19456661 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcatagggcactgcacaaccagacagggcaagcctccac 19456562  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19456561 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 19456511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 21703404 - 21703254
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| || ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21703404 gctagacctaccttccctccgataccaatgttgtatgctgagttactcccgactctacttctcagagggcactgcacaaccagacaggacaagcctccac 21703305  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21703304 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 21703254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 34303543 - 34303393
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34303543 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 34303444  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  34303443 ctgatccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 34303393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 27392973 - 27393120
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    |||||||| |||||||||||||||||| | ||||||||| | ||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  27392973 agacctacctttcctccgataccaatgatgtatgccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggcaagcctccaccta 27393072  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    | ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  27393073 acccgttgcctcccaggttccattctgacctcaagtgcgatttccatc 27393120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 3784655 - 3784805
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3784655 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 3784754  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  3784755 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 3784805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 16163600 - 16163750
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16163600 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 16163699  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  16163700 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 16163750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 34157012 - 34157162
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34157012 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 34157111  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  34157112 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 34157162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 27118689 - 27118839
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| || ||||||||||| ||| | ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27118689 gctagacctaccttccctccgataccgatgttgtatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 27118788  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  27118789 ctgatccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 27118839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 31891568 - 31891446
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31891568 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 31891469  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  31891468 ctgatccgttgcctccaaggttc 31891446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 28882215 - 28882337
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  28882215 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 28882314  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||||||||||    
T  28882315 ctgatccgttgcctcccaggttc 28882337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 12655543 - 12655665
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  12655543 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 12655642  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  12655643 ctgatccgttgcctccaaggttc 12655665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 23128806 - 23128684
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  23128806 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 23128707  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  23128706 ctgatccgttgcctccaaggttc 23128684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 27434684 - 27434534
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || ||| || |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27434684 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccggctttactccatagagggcattgtacaaccagacagggcaagcccccac 27434585  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||| ||||   || |||||||| |||||| ||||||    
T  27434584 ctgatccgttgcctcccaagttcaggtccgacctcaaatgtgatttccatc 27434534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 11635426 - 11635283
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  11635426 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 11635327  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  11635326 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 11635283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 20837919 - 20838041
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  20837919 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggcaagcccccac 20838018  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||| ||||||||||||||||    
T  20838019 ctgatctgttgcctcccaggttc 20838041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 21677422 - 21677300
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  21677422 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 21677323  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  21677322 ctgatccgttgcctccaaggttc 21677300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 11641615 - 11641472
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||  ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  11641615 gctagacctactttccctccgatacagatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 11641516  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  11641515 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 11641472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 22926268 - 22926125
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  22926268 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 22926169  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22926168 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22926125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 34279450 - 34279593
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34279450 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 34279549  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34279550 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 34279593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 40233515 - 40233662
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||||     
T  40233515 agaccaacttttcctcctataccaatgttgtatgctgagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 40233614  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    ||||||||||||| |||||||  ||||||||||| |||||| ||||||    
T  40233615 atccgttgcctccaaggttccggtctgacctcaaatgtgatttccatc 40233662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 34286355 - 34286498
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34286355 gctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 34286454  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34286455 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 34286498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 34291415 - 34291558
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34291415 gctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 34291514  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34291515 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 34291558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 34861681 - 34861803
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34861681 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 34861780  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  34861781 ctgatccgttgcctccaaggttc 34861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 37686149 - 37686027
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  37686149 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 37686050  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  37686049 ctgatccgttgcctccaaggttc 37686027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 37701414 - 37701292
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  37701414 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 37701315  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  37701314 ctgatccgttgcctccaaggttc 37701292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 37925494 - 37925616
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||||||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  37925494 gctaggcctactttccctccgataccaatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 37925593  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    |  | ||||||||||| ||||||    
T  37925594 ccgacccgttgcctccaaggttc 37925616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 31876282 - 31876404
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | || || ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  31876282 gctaggcctacttttcctcctataccaatgttgtacgcggaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 31876381  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  31876382 ctgatccgttgcctccaaggttc 31876404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 37375163 - 37375305
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  37375163 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 37375262  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  37375263 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 37375305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 13936781 - 13936684
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  13936781 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 13936684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 16829578 - 16829456
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  16829578 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 16829479  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  16829478 ctgatccgttgcctccaaggttc 16829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 16891903 - 16892025
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  16891903 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 16892002  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  16892003 ctgatccgttgcctccaaggttc 16892025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 32049799 - 32049921
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| || || ||||    
T  32049799 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaaacccccac 32049898  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    |  | ||||||||||| ||||||    
T  32049899 cggacccgttgcctccaaggttc 32049921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 39890075 - 39890197
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  39890075 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 39890174  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  39890175 ctgatccgttgcctccaaggttc 39890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 12716839 - 12716742
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  12716839 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 12716742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 27777226 - 27777323
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  27777226 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 27777323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 27803711 - 27803808
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  27803711 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 27803808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 27816984 - 27817081
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  27816984 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 27817081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 39052059 - 39051962
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  39052059 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 39051962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 260984 - 260850
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||| ||| ||    
T  260984 acttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctgatctgt 260885  T
Q  193 tgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||| ||||||   ||||| ||||| ||||||    
T  260884 tgcctccaaggttcaggtctgatctcaaatgtgat 260850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 9350219 - 9350122
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || || ||||||||||||||    
T  9350219 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcaaggcaagcctccacc 9350122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 12586814 - 12586911
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||  || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  12586814 agaccaacttttcctcctataccgatgttatatgctgagtcgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 12586911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 20461085 - 20461228
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20461085 gctagacctacctttcctccgatactaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 20461184  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||||||||||| |||||||||||||||||||    
T  20461185 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgat 20461228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 16208282 - 16208132
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  16208282 gctagacctacctttcctccgataccaatgttgtataccgagttactcccgactctacttctcagagggcactgcacaaccagacagggaaaacctccac 16208183  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16208182 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 16208132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 20340586 - 20340436
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20340586 gctagacctacctttcctccgataccaatgctatatgccgagctactcccaactctacttctcagagggcactacacaaccagacagggcaagcctccac 20340487  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  20340486 ctgatccgttacctcctaggttccgttctgacctcaagtgtgatttccatc 20340436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 28151866 - 28152016
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  28151866 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 28151965  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||| ||| ||||||||| |||  ||||||||||| |||||| ||||||    
T  28151966 ctgatctgttacctcccaggctccggtctgacctcaaatgtgatttccatc 28152016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 41793559 - 41793416
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  41793559 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 41793460  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  41793459 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 41793416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 28584985 - 28585107
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  28584985 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 28585084  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  28585085 ctgatccgttgcctccaaggttc 28585107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 10962674 - 10962796
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| | || |  |||||||| || ||||| |||||||| ||||| ||||    
T  10962674 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttgctccagagagggcattgtacaactagacagggtaagcccccac 10962773  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  10962774 ctgatccgttgcctccaaggttc 10962796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 16450135 - 16449985
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16450135 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 16450036  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| |||||||||||||| | ||||||||||||||||||| ||||||    
T  16450035 ctgatcctttgcctcccaggtttcgttctgacctcaagtgtgatttccatc 16449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 16041329 - 16041479
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041329 gctagacctaccttccctccgataccaatgttgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 16041428  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  16041429 ctgatccgttgcctcccaggttccgttctgacctaaagtgtgatttccatc 16041479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 26484700 - 26484850
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26484700 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 26484799  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  26484800 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 26484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 2109142 - 2108992
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2109142 gctagacctacctttcctctgataccaatgatatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 2109043  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  2109042 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 2108992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 2775365 - 2775515
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2775365 gctagacctacctttcctctgataccaatgctatatgctgagtagctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 2775464  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  2775465 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 2775515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 31088601 - 31088451
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31088601 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 31088502  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  31088501 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 31088451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 39211160 - 39211010
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  39211160 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcttccac 39211061  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  39211060 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 39211010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 45733466 - 45733616
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || ||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45733466 gctagacctacctttcctctgataccaatgttatatgctgaattactcttaactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 45733565  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  45733566 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 45733616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 18540805 - 18540947
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18540805 gctagacctacttttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 18540904  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  18540905 cggaccctttacctccaaggttccgctctgatcttaagtgtga 18540947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 11424913 - 11424791
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| ||||||||||||||||||||||| ||||    
T  11424913 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgcacaaccagacagggcaagcccccac 11424814  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  11424813 ctgatccgttgcctccaaggttc 11424791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 5127998 - 5128141
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||| ||||| ||||    
T  5127998 gctagacctacttttcctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggtaagcccccac 5128097  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    |||||||||||||||| ||||||   ||||| ||||| ||||||    
T  5128098 ctaatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5128141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 10917005 - 10916883
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  10917005 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 10916906  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  10916905 ctgatccgttgcctccaaggttc 10916883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 16503517 - 16503395
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  16503517 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 16503418  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  16503417 ctgatccgttgcctccaaggttc 16503395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 16518553 - 16518431
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  16518553 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 16518454  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  16518453 ctgatccgttgcctccaaggttc 16518431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 5147477 - 5147334
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  5147477 gctagacctacttttcctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 5147378  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  5147377 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5147334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 2154579 - 2154701
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||| |||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  2154579 gctagacatactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 2154678  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  2154679 ctgatccgttgcctccaaggttc 2154701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 16736597 - 16736454
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  16736597 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 16736498  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  16736497 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 16736454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 16751651 - 16751508
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  16751651 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 16751552  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  16751551 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 16751508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 17523538 - 17523681
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  17523538 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 17523637  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  17523638 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 17523681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 17529677 - 17529534
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  17529677 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 17529578  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  17529577 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 17529534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 4145260 - 4145138
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  4145260 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 4145161  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  4145160 ctgatccgttgcctccaaggttc 4145138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 9618657 - 9618779
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  9618657 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 9618756  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  9618757 ctgatccgttgcctccaaggttc 9618779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 26275231 - 26275109
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26275231 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 26275132  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  26275131 ctgatccgttgcctccaaggttc 26275109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 26320006 - 26319884
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26320006 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 26319907  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  26319906 ctgatccgttgcctccaaggttc 26319884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 45387349 - 45387471
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  45387349 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 45387448  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  45387449 ctgatccgttgcctccaaggttc 45387471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 3445315 - 3445434
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  3445315 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 3445414  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  3445415 atccgttgcctccaaggttc 3445434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 26435263 - 26435406
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26435263 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 26435362  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  26435363 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 26435406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 26670051 - 26669929
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26670051 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 26669952  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || |||||||||| || ||||||    
T  26669951 ctgatccgttgcccccaaggttc 26669929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 31564526 - 31564405
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  31564526 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgtacaactagacagggtaagcccccacc 31564427  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  31564426 tgatccgttgcctccaaggttc 31564405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 26538004 - 26537885
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| ||  | || |||||||||||||| ||||||     
T  26538004 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtgcgactagacagggcaagccaccacctg 26537905  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  26537904 atccgttgcctccaaggttc 26537885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 11441587 - 11441700
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | || || ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| |||||| ||||||    
T  11441587 acttttcctcctataccaatgttgtacgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctgatccgt 11441686  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  11441687 tgcctccaaggttc 11441700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 31124927 - 31125048
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| || || ||||| |||||||||||||| |||||    
T  31124927 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 31125026  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  31125027 tgatccgttgcctccaaggttc 31125048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 5159525 - 5159667
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  5159525 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 5159624  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  5159625 cggaccctttacctccaaggttccgctctgatcttaagtgtga 5159667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 279 - 129
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  279 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgctcaaccagacatggcaagcctccac 180  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  179 ctgatccgttgccttccaggttccgttctgacctcaagtgtgatttccatc 129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 15227890 - 15228040
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15227890 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgtacaaccagacagggtaagcctccac 15227989  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  15227990 ctgatccattgcctcccaggttccgttctgacctcaagtgtgatttccatc 15228040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 15285179 - 15285029
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15285179 gctagacctacctttcctccgataccaatgctatatttcgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 15285080  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||||||||||||||||||||  |||||||||||||||||| ||||||    
T  15285079 ctgatccgttgcctcccaggttccggtctgacctcaagtgtgatttccatc 15285029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 1900277 - 1900427
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  1900277 gctagacctacctttcctccgataccaatgctgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacatggtaagcctccac 1900376  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||| || |||||| | ||||||||||||||||||| ||||||    
T  1900377 ctgatccgttgcttctcaggtttcgttctgacctcaagtgtgatttccatc 1900427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 24460856 - 24460706
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24460856 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 24460757  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  24460756 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 24460706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 15391586 - 15391439
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    |||||||| |||||||||||||||||||| || |||||||| ||||||||| | ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  15391586 agacctacctttcctccgataccaatgctgtacgccgagttgctcccgactttgcttctcaaagggcactgcacaaccaggcaggggaagcctccaccta 15391487  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    | ||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  15391486 acccgttgcctcccaggttccgttctgacctcaagtgcgatttccatc 15391439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 14235776 - 14235626
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| | ||||||||| | ||||||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  14235776 gctagacctacctttcctctgataccaatgttgtatgccgagctgctcccgactctgcttcttaaagggcactgtacaaccagacagggcaagcctccac 14235677  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    |||| || |||||||||||||||||||  |||||||| |||||| ||||||    
T  14235676 ctaaccctttgcctcccaggttccatttcgacctcaaatgtgatttccatc 14235626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 17014020 - 17014163
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  17014020 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccaaagagggcattgtacaaccagacagggcaagcccccac 17014119  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||||||||||   || |||||||| ||||||    
T  17014120 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgat 17014163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 14763555 - 14763412
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  14763555 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 14763456  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  14763455 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 14763412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 24592565 - 24592443
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24592565 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 24592466  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  24592465 ctgatccgttgcctccaaggttc 24592443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 14098561 - 14098683
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||    
T  14098561 gctagacctacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccac 14098660  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  14098661 ctgatccgttgcctccaaggttc 14098683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 14665038 - 14665160
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  14665038 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagaggacattgtacaaccagacagggcaagcccccac 14665137  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  14665138 ctgatccgttgcctccaaggttc 14665160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 5005893 - 5006036
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| ||||| |||||||| ||||    
T  5005893 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacaaggcaagcccccac 5005992  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  5005993 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5006036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 6569873 - 6570016
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  6569873 gctagacctactttccctccgataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 6569972  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  6569973 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 6570016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 27163568 - 27163446
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  27163568 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 27163469  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  27163468 ctgatccgttgcctccaaggttc 27163446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 18800863 - 18800742
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| |||||    
T  18800863 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacc 18800764  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  18800763 tgatccgttgcctccaaggttc 18800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 30753777 - 30753896
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  30753777 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 30753876  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  30753877 atccgttgcctccaaggttc 30753896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 31126769 - 31126647
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  31126769 gctaggcctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 31126670  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || | ||||||||||| ||||||    
T  31126669 ctgacccgttgcctccaaggttc 31126647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 33674046 - 33673906
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||      
T  33674046 agaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccaccgg 33673947  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||| ||||||   ||||| ||||| ||||||    
T  33673946 acccgttgcctccaaggttcaggtctgatctcaaatgtgat 33673906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 36344765 - 36344623
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  36344765 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 36344666  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  36344665 tgatccgttgcctccgaggttcaggtctgatctcaaatgtgat 36344623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 40105889 - 40105767
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||  | || || ||| |||| |  |||||||| || || || |||||||||||||| ||||    
T  40105889 gctaggcctactttccctccgataccgatgttatatgctgaacttcttccaactttactccagagagggcattgtacgactagacagggcaagccaccac 40105790  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  40105789 ctgatccgttgcctccaaggttc 40105767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 24112682 - 24112824
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  24112682 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 24112781  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  24112782 cggaccctttacctccaaggttccgctctgatcttaagtgtga 24112824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 34189211 - 34189069
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  34189211 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 34189112  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  34189111 cggaccctttacctccaaggttccgctctgatcttaagtgtga 34189069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 54833408 - 54833550
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  |||||||| || ||||| || ||||||||||| |||||    
T  54833408 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactaggcagggcaagcccccacc 54833507  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | | ||||||||||| ||||||   ||||| ||||| ||||||    
T  54833508 tgacccgttgcctccaaggttcaggtctgatctcaaatgtgat 54833550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 39850661 - 39850758
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  39850661 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 39850758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 20393 - 20543
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20393 gctagacctacctttcccccgataccaatgttgtatgctgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 20492  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20493 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 20543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 30532 - 30579
Alignment:
Q  159 acaaccagacagggcaagcctccacctaatccgttgcctcccaggttc 206  Q
    ||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  30532 acaactagacagggcaagccaccacctgatccgttgcctccaaggttc 30579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 16626798 - 16626648
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16626798 gctagacctacctttcctccgataccaatgatatatgtcgagttactccctactctacttcttagagggcactgcacaaccagacagggcaagcctccac 16626699  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16626698 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 16626648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 18530354 - 18530504
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18530354 gctagacctacctttcctccgataccaatgttgtatgctgagttactcctgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 18530453  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18530454 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 18530504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 4625910 - 4626060
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4625910 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 4626009  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  4626010 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 4626060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 31034409 - 31034259
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31034409 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 31034310  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| ||||| |||||||  ||||||||||| |||||| ||||||    
T  31034309 ctgatccgttacctcctaggttccggtctgacctcaaatgtgatttccatc 31034259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 32292718 - 32292868
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  32292718 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagtctccac 32292817  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  32292818 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 32292868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 17994076 - 17993926
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17994076 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 17993977  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| |||||||| |||||| ||||||    
T  17993976 ctgatccatcgcctcccaagttccgttcggacctcaaatgtgatttccatc 17993926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 5652353 - 5652503
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||    
T  5652353 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctactcctcaaagggcactgcacaaccagacagggcaagccttcac 5652452  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || | |||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  5652453 ctgacccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 5652503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 15892998 - 15892876
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||||||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  15892998 gctagacctactttccctccgataccaatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 15892899  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || |||| |||||||||||||||    
T  15892898 ctgatcctttgcctcccaggttc 15892876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 8295938 - 8296060
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| | ||||||||| || |||||||||||||||||||| | ||    
T  8295938 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccacagagggcattgtacaaccagacagggcaagcccctac 8296037  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||| ||||||||||||||||    
T  8296038 ctgatctgttgcctcccaggttc 8296060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 8301559 - 8301437
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  8301559 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 8301460  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  8301459 ctgatccgttgcctccaaggttc 8301437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 18330635 - 18330757
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||  |||| |  |||||||| || |||||||||||||||||||| ||||    
T  18330635 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgaccttactccatagagggcattgtacaaccagacagggcaagcccccac 18330734  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  18330735 ctgatccgttgcctccaaggttc 18330757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 4721597 - 4721740
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  4721597 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 4721696  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||| ||||||| ||||||   || |||||||| ||||||    
T  4721697 ctgatccgctgcctccaaggttcaggtccgacctcaaatgtgat 4721740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 22387870 - 22387727
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  22387870 gctagaccgacttttcctcctataccaatgttgtatgcagagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 22387771  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22387770 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22387727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 4796945 - 4796823
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  4796945 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 4796846  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  4796845 ctgatccgttgcctccaaggttc 4796823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 15741386 - 15741264
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  15741386 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 15741287  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || || |||||||||| ||||||    
T  15741286 ctgattcgttgcctccaaggttc 15741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 17985248 - 17985126
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||    
T  17985248 gctagacctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccac 17985149  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  17985148 ctgatccgttgcctccaaggttc 17985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 18051228 - 18051350
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  18051228 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 18051327  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||| ||||||||||||||    
T  18051328 ctgatccgctgcctcccaggttc 18051350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 6542753 - 6542632
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| ||||||||||| |||||||||||||| |||||    
T  6542753 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacaactagacagggcaagccaccacc 6542654  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  6542653 tgatccgttgcctccaaggttc 6542632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 5609614 - 5609471
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  5609614 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 5609515  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  5609514 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5609471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 6192282 - 6192425
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  6192282 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 6192381  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||| | ||||||| ||||||   || |||||||| ||||||    
T  6192382 ctgatctgctgcctccaaggttcaggtccgacctcaaatgtgat 6192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 18277344 - 18277201
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  18277344 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 18277245  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||| ||||||||| ||||||   ||||| ||||| ||||||    
T  18277244 ctgatcagttgcctccaaggttcaggtctgatctcaaatgtgat 18277201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 18292645 - 18292502
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  18292645 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 18292546  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||| ||||||||| ||||||   ||||| ||||| ||||||    
T  18292545 ctgatcagttgcctccaaggttcaggtctgatctcaaatgtgat 18292502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 18307946 - 18307803
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  18307946 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 18307847  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||| ||||||||| ||||||   ||||| ||||| ||||||    
T  18307846 ctgatcagttgcctccaaggttcaggtctgatctcaaatgtgat 18307803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 28339268 - 28339411
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  28339268 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 28339367  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  28339368 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 28339411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 29149047 - 29148904
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  29149047 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggcaagcccccac 29148948  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  29148947 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 29148904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 31964765 - 31964622
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  31964765 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 31964666  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  31964665 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 31964622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 50134363 - 50134220
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  50134363 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 50134264  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  50134263 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 50134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 35880732 - 35880854
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||||| |||||||||||| ||||    
T  35880732 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccaaacagggcaagcccccac 35880831  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||| ||||||| ||||||    
T  35880832 ctgatccgctgcctccaaggttc 35880854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 4416885 - 4417028
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| ||||||||||| || ||||    
T  4416885 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaaacccccac 4416984  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  4416985 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 4417028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 5713196 - 5713315
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5713196 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5713295  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  5713296 atccgttgcctccaaggttc 5713315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 5724106 - 5724225
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5724106 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5724205  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  5724206 atccgttgcctccaaggttc 5724225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 5757371 - 5757252
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5757371 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5757272  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  5757271 atccgttgcctccaaggttc 5757252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 5768262 - 5768143
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5768262 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5768163  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  5768162 atccgttgcctccaaggttc 5768143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 10396099 - 10396242
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||| | || || ||| |||| |  ||||| ||||||||||| |||||||| ||||| ||||    
T  10396099 gctagacctactttccctccgatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacaactagacagggtaagcccccac 10396198  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  10396199 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 10396242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 28116246 - 28116103
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| || || || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  28116246 gctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 28116147  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
     | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  28116146 ttgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 28116103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 36997366 - 36997247
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  36997366 agaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 36997267  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  36997266 atccgttgcctccaaggttc 36997247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 7996528 - 7996650
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  7996528 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 7996627  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  7996628 ctgatccgttgcctccaaggttc 7996650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 10643036 - 10643158
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  10643036 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 10643135  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  10643136 ctgatccgttgcctccaaggttc 10643158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 47023419 - 47023541
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  47023419 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 47023518  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  47023519 ctgatccgttgcctccaaggttc 47023541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 7073178 - 7073321
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || || || ||||| || ||||| || |    
T  7073178 gctagacctacttttcctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacgactagacaaggtaagcccccgc 7073277  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  7073278 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 7073321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 21674659 - 21674802
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || |||||||||||||| ||||    
T  21674659 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccaaagagggcattgtacgactagacagggcaagccaccac 21674758  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  21674759 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 21674802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 11110638 - 11110498
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||||||||||     
T  11110638 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcctccacctg 11110539  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  11110538 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 11110498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 4346979 - 4346836
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||    
T  4346979 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccac 4346880  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  4346879 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 4346836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 18242706 - 18242827
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| || || ||||| |||||||||||||| |||||    
T  18242706 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 18242805  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  18242806 tgatccgttgcctccaaggttc 18242827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 5466953 - 5467073
Alignment:
Q  86 tagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacct 185  Q
    |||||| ||||||||||  ||||| ||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||    
T  5466953 tagaccaacttttcctcttatacctatgttgtatgcagaactccttccaactctactccagagagggcattgtacaactagacagggcaagccaccacct 5467052  T
Q  186 aatccgttgcctcccaggttc 206  Q
     ||||||||||||| ||||||    
T  5467053 gatccgttgcctccaaggttc 5467073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 48465896 - 48466036
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||||     
T  48465896 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccaaagaggacactgcacgactagacagggtaagcccccacctg 48465995  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  48465996 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 48466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 22871148 - 22871005
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || || ||||| ||||| ||||    
T  22871148 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccac 22871049  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22871048 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22871005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 22886207 - 22886064
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || || ||||| ||||| ||||    
T  22886207 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccac 22886108  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22886107 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22886064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 28021241 - 28021384
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  28021241 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactatactccagagagggcattgtacaactagacagggcaagccaccac 28021340  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || |||| || ||||| ||||||   ||||| ||||| ||||||    
T  28021341 ctgatccattacctccaaggttcaggtctgatctcaaatgtgat 28021384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 51782052 - 51782111
Alignment:
Q  147 agagggcactgcacaaccagacagggcaagcctccacctaatccgttgcctcccaggttc 206  Q
    |||||||| || ||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  51782052 agagggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttc 51782111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 4893176 - 4893318
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || |||||||| |||||||    
T  4893176 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaaacctccac 4893275  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||| ||||| || ||||||||    
T  4893276 cggaccctttacctccaaggttccactctgatcttaagtgtga 4893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 5013687 - 5013800
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | || || ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| |||||| ||||||    
T  5013687 acttttcctcctataccaatgttgtacgcggaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccacctgatccgt 5013786  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  5013787 tgcctccaaggttc 5013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 5596648 - 5596527
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| || || ||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| |||||    
T  5596648 ctagaccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 5596549  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  5596548 tgatccgttgcctccaaggttc 5596527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 20577136 - 20577039
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  20577136 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 20577039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 29665259 - 29665162
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  29665259 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 29665162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 20066010 - 20066109
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  20066010 ctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 20066109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 51797141 - 51797192
Alignment:
Q  147 agagggcactgcacaaccagacagggcaagcctccacctaatccgttgcctc 198  Q
    |||||||| || ||||| |||||||||||||| |||||| ||||||||||||    
T  51797141 agagggcattgtacaactagacagggcaagccaccacctgatccgttgcctc 51797192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 8211713 - 8211847
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || || ||||| ||||| |||||| ||||||    
T  8211713 acttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccacctgatccgt 8211812  T
Q  193 tgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||| ||||||   ||||| ||||| ||||||    
T  8211813 tgcctccaaggttcaggtctgatctcaaatgtgat 8211847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 18225157 - 18225279
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| ||||| || ||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| ||||    
T  18225157 gctaggcctaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggtaagcccccac 18225256  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  18225257 ctgatccgttgcctccaaggttc 18225279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 32439120 - 32439262
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  32439120 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 32439219  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  32439220 cggaccctttacctccaaggttccgctctgatcttaagtgtga 32439262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 2909 - 2759
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2909 gctagacctacctttcctccgataccaatgctatatgccgagctactcccaactctacttctcagagggcactacacaaccagacagggcaagcctccac 2810  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  2809 ctgatccgttacctcctaggttccgttctgacctcaagtgtgatttccatc 2759  T

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Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 22888484 - 22888634
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22888484 gctagacctaccttccctccgataccaatgttgtatgctgagttactcccgactctatttctcagagggcactgcacaaccagacagggcaagcctccac 22888583  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  22888584 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 22888634  T

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Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 25199043 - 25199193
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25199043 gctagacctaccttttctccgataccaatgttgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 25199142  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  25199143 ctgatccgttacctcccaggttccgttctgatctcaagtgtgatttccatc 25199193  T

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Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 23892220 - 23892370
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| |||||||||||||||||  | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23892220 gctagacctacctttcctccgataccaatcatgtatgccgagttgcttccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 23892319  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||||||||||||||||||||  || |||||||| |||||| ||||||    
T  23892320 ctgatccgttgcctcccaggttccggtccgacctcaaatgtgatttccatc 23892370  T

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Target: chr5; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 13184796 - 13184646
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13184796 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13184697  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  13184696 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 13184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 33877261 - 33877411
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33877261 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 33877360  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  33877361 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 33877411  T

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Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 11325808 - 11325958
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11325808 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 11325907  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| |||||||| |||||| ||||||    
T  11325908 ctgatccatcgcctcccaagttccgttcggacctcaaatgtgatttccatc 11325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 13440642 - 13440492
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| |||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13440642 gctagacctacctttcctctgataccaatgttatatgctaaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13440543  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  13440542 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 13440492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 29889230 - 29889080
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| | ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29889230 gctagacctacctttcctctgataccaatgttgtatgctgagctactcccaactctacttctcagagggcactgcaccaccagacagggcaagcctccac 29889131  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||||||||||||||||||||  ||||||||||  |||||| ||||||    
T  29889130 ctgatccgttgcctcccaggttccggtctgacctcatatgtgatttccatc 29889080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 23752598 - 23752455
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  23752598 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 23752499  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   || |||||||| ||||||    
T  23752498 ctgatccgttgcctccaaggttcaggtccgacctcaaatgtgat 23752455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 11549368 - 11549490
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  11549368 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 11549467  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  11549468 ctgatccgttgcctccaaggttc 11549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 23718136 - 23718014
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  23718136 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 23718037  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  23718036 ctgatccgttgcctccaaggttc 23718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 30934647 - 30934769
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  30934647 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 30934746  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||||||||||    
T  30934747 ctgatccgttgcctcccaggttc 30934769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 24688305 - 24688183
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||  | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24688305 gctagacctactttccctccgataccgatattgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 24688206  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||||||||||    
T  24688205 ctgatccgttgcctcccaggttc 24688183  T

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Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 24970032 - 24970154
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24970032 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 24970131  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  24970132 ctgatccgttgcctccaaggttc 24970154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 33777501 - 33777644
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  33777501 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 33777600  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   || |||||||| ||||||    
T  33777601 ctgatccgttgcctccaaggttcaggtccgacctcaaatgtgat 33777644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 2511065 - 2511187
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  2511065 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 2511164  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  2511165 ctgatccgttgcctccaaggttc 2511187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 8665623 - 8665501
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  8665623 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 8665524  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  8665523 ctgatccgttgcctccaaggttc 8665501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 15759005 - 15758883
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  15759005 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 15758906  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  15758905 ctgatccgttgcctccaaggttc 15758883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 6874319 - 6874462
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||| | || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  6874319 gctaggcctactttccctccgataccgatgttatatgctgagctgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 6874418  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  6874419 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 6874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 9548691 - 9548548
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| || || || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  9548691 gctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 9548592  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||||||||||    
T  9548591 ctgatccgttgcctccaaggttcaggtctgatctcaagtgtgat 9548548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 22999262 - 22999119
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  22999262 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagaggacattgtacaaccagacagggcaagcccccac 22999163  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   || || ||||||||||||    
T  22999162 ctgatccgttgcctccaaggttcaggtccgatctcaagtgtgat 22999119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 26480406 - 26480528
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  26480406 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 26480505  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  26480506 ctgatccgttgcctccaaggttc 26480528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 37671630 - 37671488
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || |||||||||||||| |||||    
T  37671630 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggcaagccaccacc 37671531  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  37671530 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 37671488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 15658908 - 15658765
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  15658908 gctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 15658809  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  15658808 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 15658765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 41674723 - 41674866
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| || || || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  41674723 gctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 41674822  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  41674823 ctgatccgttgcctccaaggttcagatctgatctcaaatgtgat 41674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 5637924 - 5638046
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  5637924 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 5638023  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  5638024 ctgatccgttgcctccaaggttc 5638046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 9317465 - 9317587
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  9317465 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 9317564  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  9317565 ctgatccgttgcctccaaggttc 9317587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 12132169 - 12132291
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  12132169 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 12132268  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  12132269 ctgatccgttgcctccaaggttc 12132291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 18500877 - 18500735
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| |||||    
T  18500877 ctagaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacgactagacagggcaagccaccacc 18500778  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  18500777 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 18500735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 28649250 - 28649392
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| |||||    
T  28649250 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacc 28649349  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  28649350 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 28649392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 30152032 - 30152154
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  30152032 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 30152131  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  30152132 ctgatccgttgcctccaaggttc 30152154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 30168483 - 30168605
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| ||||    
T  30168483 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccac 30168582  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  30168583 ctgatccgttgcctccaaggttc 30168605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 34616532 - 34616654
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  ||||| || || ||||| |||||||| ||||| ||||    
T  34616532 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagaggacattgtacaactagacagggtaagcccccac 34616631  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  34616632 ctgatccgttgcctccaaggttc 34616654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 31431463 - 31431576
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || |||||||||||||| |||||| ||||||    
T  31431463 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacagggcaagccaccacctgatccgt 31431562  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  31431563 tgcctccaaggttc 31431576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 31826552 - 31826433
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  31826552 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 31826453  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  31826452 atccgttgcctccaaggttc 31826433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 18375560 - 18375438
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  18375560 gctagacctacttttcctcctataccaatgttgtatgcagatcttcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 18375461  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  18375460 ctgatccgttgcctccaaggttc 18375438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 28959934 - 28959812
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| ||||    
T  28959934 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccac 28959835  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  28959834 ctgatccgttgcctccaaggttc 28959812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 37771134 - 37770992
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || || || |||||||||||||| |||||    
T  37771134 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggtcattgtacgactagacagggcaagccaccacc 37771035  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  37771034 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 37770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 37358790 - 37358669
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| |||||    
T  37358790 ctagaccaacttttcctcctataccaatgttgtatgcggaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 37358691  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  37358690 tgatccgttgcctccaaggttc 37358669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 32599620 - 32599477
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||    
T  32599620 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccac 32599521  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  32599520 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 32599477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 3789556 - 3789677
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  3789556 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 3789655  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  3789656 tgatccgttgcctccaaggttc 3789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 37754995 - 37755116
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || || || ||||| |||||||| |||||    
T  37754995 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggtcattgtacgactagacaaggcaagccaccacc 37755094  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  37755095 tgatccgttgcctccaaggttc 37755116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 43078269 - 43078409
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || |||||||| ||||| ||||||     
T  43078269 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactagacagggtaagcccccacctg 43078368  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  43078369 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 43078409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 33292539 - 33292681
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  33292539 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 33292638  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  33292639 cggaccctttacctccaaggttccgctctgatcttaagtgtga 33292681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 33516370 - 33516492
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  33516370 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 33516469  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  33516470 ctgatccgttgcctccaaggttc 33516492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 24681457 - 24681554
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  24681457 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 24681554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 24723984 - 24724081
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  24723984 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 24724081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 40473694 - 40473597
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  40473694 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 40473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 226
Target Start/End: Complemental strand, 13324976 - 13324835
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  13324976 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 13324877  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtga 226  Q
      | || || ||||| |||||||  ||||| ||||| |||||    
T  13324876 ggaccctttacctccaaggttccgctctgatctcaaatgtga 13324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 22457128 - 22456978
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22457128 gctagacctacctttcctctgataccaatgatgtatgccgagttactcccgactctacttctcataaggcactgcacaaccagacagggcaagcctccac 22457029  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  22457028 ctgatccgttgcctcccaggttccgttcttacctcaagtgtgatttccatc 22456978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 22477467 - 22477317
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22477467 gctagacctacctttcctctgataccaatgatgtatgccgagttactcccgactctacttctcatatggcactgcacaaccagacagggcaagcctccac 22477368  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  22477367 ctgatccgttgcctcccaggttccgttctaacctcaagtgtgatttccatc 22477317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 27290564 - 27290414
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27290564 gctagacctacctttcctctgataccaatgttatatgctgagttgctcccgactctacttctcagagggcactacacaaccagacagggcaagcctccac 27290465  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| ||||||| ||||| ||||||||||||||||||| ||||||    
T  27290464 ctgatccgttacctcccaagttccgttctgacctcaagtgtgatttccatc 27290414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 8892504 - 8892354
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8892504 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 8892405  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  8892404 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 8892354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 8903739 - 8903589
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8903739 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 8903640  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  8903639 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 8903589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 13522267 - 13522117
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13522267 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13522168  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  13522167 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 13522117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 14143479 - 14143329
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  14143479 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 14143380  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  14143379 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 14143329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 26787946 - 26788096
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  26787946 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 26788045  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  26788046 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 26788096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 27196319 - 27196469
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  27196319 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 27196418  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  27196419 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 27196469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 27252921 - 27252771
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  27252921 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 27252822  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  27252821 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 27252771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 33374450 - 33374300
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33374450 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 33374351  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  33374350 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 33374300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 28162659 - 28162809
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28162659 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 28162758  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
     | |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  28162759 ttgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 28162809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 20160704 - 20160851
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    |||||||||| |||||||||||||| ||| ||||||| ||||||||||| ||| |||||| ||||||||| ||||||||||| || ||||||||||||||    
T  20160704 ctagacctacctttcctccgataccgatgttatatgctgagttactcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacc 20160803  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgatgtcca 232  Q
    | ||||||| ||||||||||||  ||| || |||||||||||| ||||    
T  20160804 tgatccgttacctcccaggttctgttccgatctcaagtgtgatttcca 20160851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 22172127 - 22171980
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    |||||||||| |||||||||||||| ||| ||||||| ||||||||||| ||| |||||| ||||||||| ||||||||||| || ||||||||||||||    
T  22172127 ctagacctacctttcctccgataccgatgttatatgctgagttactcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacc 22172028  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgatgtcca 232  Q
    | ||||||| ||||||||||||  ||| || |||||||||||| ||||    
T  22172027 tgatccgttacctcccaggttctgttccgatctcaagtgtgatttcca 22171980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 22935074 - 22934924
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  22935074 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 22934975  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||   || |||||||| |||||| ||||||    
T  22934974 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatc 22934924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 23857519 - 23857369
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  23857519 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 23857420  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||   || |||||||| |||||| ||||||    
T  23857419 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatc 23857369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 27272771 - 27272624
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || ||||||||||| |  |||||||| || |||||||||||||| ||||| ||||||     
T  27272771 agacctactttccctccgataccgatgttatatgctgagttgcttccgactctactccagagagggcattgtacaaccagacagggtaagcccccacctg 27272672  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    |||||| |||||||||||||   || |||||||| |||||| ||||||    
T  27272671 atccgtcgcctcccaggttcaggtccgacctcaaatgtgatttccatc 27272624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 26918382 - 26918525
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  26918382 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 26918481  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  26918482 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 26918525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 13299145 - 13299023
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  13299145 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 13299046  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  13299045 ctgatccgttgcctccaaggttc 13299023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 24304812 - 24304690
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24304812 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 24304713  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  24304712 ctgatccgttgcctccaaggttc 24304690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 26989003 - 26989125
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  26989003 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 26989102  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  26989103 ctgatccgttgcctccaaggttc 26989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 16749856 - 16749999
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  16749856 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggcaagcccccac 16749955  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  16749956 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 16749999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 15424511 - 15424389
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  15424511 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaactagacagggcaagcccccac 15424412  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  15424411 ctgatccgttgcctccaaggttc 15424389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 24863719 - 24863841
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24863719 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 24863818  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  24863819 ctgatccgttgcctccaaggttc 24863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 27000075 - 27000197
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27000075 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 27000174  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  27000175 ctgatccgttgcctccaaggttc 27000197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 4525289 - 4525410
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || |||||||| |||||||||||||| |||||    
T  4525289 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgcacaactagacagggcaagccaccacc 4525388  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  4525389 tgatccgttgcctccaaggttc 4525410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 29549477 - 29549620
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  29549477 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 29549576  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  29549577 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 29549620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 4773009 - 4773130
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  4773009 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 4773108  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  4773109 tgatccgttgcctccaaggttc 4773130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 3696086 - 3696205
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| ||||||     
T  3696086 agaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacctg 3696185  T
Q  187 atccgttgcctcccaggttc 206  Q
    ||||||||||||| ||||||    
T  3696186 atccgttgcctccaaggttc 3696205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 29573015 - 29573137
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || || ||||| ||||| ||||    
T  29573015 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggtaagcccccac 29573114  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  29573115 ctgatccgttgcctccaaggttc 29573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 4545960 - 4545847
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||| ||||||    
T  4545960 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacctgatccgt 4545861  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  4545860 tgcctccaaggttc 4545847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 4724319 - 4724206
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || ||||| |||||||| |||||| ||||||    
T  4724319 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 4724220  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  4724219 tgcctccaaggttc 4724206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 4757767 - 4757888
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  4757767 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgtacaactagacagggtaagcccccacc 4757866  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  4757867 tgatccgttgcctccaaggttc 4757888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 28207465 - 28207578
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || ||||| |||||||| |||||| ||||||    
T  28207465 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 28207564  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  28207565 tgcctccaaggttc 28207578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 16674144 - 16674284
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||||     
T  16674144 agaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 16674243  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  16674244 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 16674284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 34463537 - 34463397
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || ||||| || ||||| ||||||     
T  34463537 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactagacaaggaaagcccccacctg 34463438  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34463437 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 34463397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 27007730 - 27007872
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  27007730 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 27007829  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  27007830 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 27007872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 27044390 - 27044532
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  |||||||| || ||||| |||||||||||||| |||||    
T  27044390 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccacc 27044489  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | | ||||||||||| ||||||   ||||| ||||| ||||||    
T  27044490 tgacccgttgcctccaaggttcaggtctgatctcaaatgtgat 27044532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 27485132 - 27485253
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| || || ||||| |||||||||||||| |||||    
T  27485132 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 27485231  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  27485232 tgatccgttgcctccaaggttc 27485253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 26777809 - 26777687
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| || || ||||| ||||| ||| | ||||||||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| ||||    
T  26777809 gctagaccaaccttccctcctataccgatgttgtatgccgaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccac 26777710  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  26777709 ctgatccgttgcctccaaggttc 26777687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 30558210 - 30558088
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  30558210 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 30558111  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  30558110 ctgatccgttgcctccaaggttc 30558088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 26116603 - 26116482
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||  | || |||||| |||| |  ||||| || || || || |||||||||||||| |||||    
T  26116603 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccgactttactccagagaggtcattgtacgactagacagggcaagccaccacc 26116504  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  26116503 tgatccgttgcctccaaggttc 26116482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 27360185 - 27360064
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  27360185 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 27360086  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  27360085 tgatccgttgcctccaaggttc 27360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 27450528 - 27450407
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  27450528 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 27450429  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  27450428 tgatccgttgcctccaaggttc 27450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 29501418 - 29501539
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| || || ||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| |||||    
T  29501418 ctagaccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 29501517  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  29501518 tgatccgttgcctccaaggttc 29501539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 17025280 - 17025379
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| |||||||| || || |||||||||||||||||    
T  17025280 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggacactgcacgactaggcagggcaagcctccacc 17025379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 44563106 - 44563256
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44563106 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 44563205  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  44563206 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 44563256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 9354627 - 9354777
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  9354627 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctactcctcaaagggcactgcacaaccagacagggcaagcctccac 9354726  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  9354727 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 9354777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 19659249 - 19659099
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  19659249 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccac 19659150  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || | |||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  19659149 ctgacccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 19659099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 22081085 - 22080938
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    |||||||| |||||||||||||||||||| || |||||| | ||||||||| | ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  22081085 agacctacctttcctccgataccaatgctgtacgccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggaaagcctccaccta 22080986  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    | ||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  22080985 acccgttgcctcccaggttccgttctgacctcaagtgcgatttccatc 22080938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 33244670 - 33244820
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| ||||||| |||||||||| ||||||  || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  33244670 gctagacctacctttcctctgataccaatgttatatgttgaattactcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccac 33244769  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || | |||| |||||| | ||||| ||| ||||||||||||||| ||||||    
T  33244770 ctgacccgtcgcctcctaagttccgttcggacctcaagtgtgatttccatc 33244820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 16283454 - 16283604
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||||||||| || ||||||||||| ||| | ||||| ||||| || |||||| |||| || |||||||| || |||||||||||||||||||| ||||    
T  16283454 gctagacctaccttccctccgataccgatgttgtatgctgagttgcttccgactttactccttagagggcattgtacaaccagacagggcaagcccccac 16283553  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    || ||||||||||||||||||||   || |||||||| |||||| ||||||    
T  16283554 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatc 16283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 16277559 - 16277681
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  16277559 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 16277658  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||||||||||    
T  16277659 ctgatccgttgcctcccaggttc 16277681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 2137469 - 2137347
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  2137469 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 2137370  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  2137369 ctgatccgttgcctccaaggttc 2137347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 19688103 - 19688225
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  19688103 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 19688202  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  19688203 ctgatccgttgcctccaaggttc 19688225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 27609115 - 27608993
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27609115 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 27609016  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  27609015 ctgatccgttgcctccaaggttc 27608993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 31354529 - 31354672
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||||||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  31354529 gctaggcctactttccctccgataccgatgttatatgccgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 31354628  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || |||| |||||||| ||||||   ||||| ||||| ||||||    
T  31354629 ctgatcctttgcctccaaggttcaggtctgatctcaaatgtgat 31354672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 14557629 - 14557751
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||||||||||||||||||  | |    
T  14557629 gctagacctactttccctccgataccaatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagccctcgc 14557728  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  14557729 ctgatccgttgcctccaaggttc 14557751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 19208570 - 19208448
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  19208570 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 19208471  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  19208470 ctgatccgttgcctccaaggttc 19208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 31489960 - 31489838
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  31489960 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 31489861  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  31489860 ctgatccgttgcctccaaggttc 31489838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 19674446 - 19674589
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| ||||||||||| || ||||    
T  19674446 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaaacccccac 19674545  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  19674546 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 19674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 28362165 - 28362043
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  28362165 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 28362066  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  28362065 ctgatccgttgcctccaaggttc 28362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 3329716 - 3329595
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  3329716 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 3329617  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  3329616 tgatccgttgcctccaaggttc 3329595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 18710591 - 18710734
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| |||||  |||    
T  18710591 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagccctcac 18710690  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||| ||||||| ||||||   ||||| ||||||||||||    
T  18710691 ctgatccgctgcctccaaggttcaggtctgatctcaagtgtgat 18710734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 12092933 - 12092812
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  12092933 ctagaccaacttttcctcctataccaatgttgtatgcggaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 12092834  T
Q  185 taatccgttgcctcccaggttc 206  Q
    | ||||||||||||| ||||||    
T  12092833 tgatccgttgcctccaaggttc 12092812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 19286468 - 19286610
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  |||||||| || ||||| || ||||||||||| |||||    
T  19286468 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactaggcagggcaagcccccacc 19286567  T
Q  185 taatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    | | ||||||||||| ||||||   ||||| ||||| ||||||    
T  19286568 tgacccgttgcctccaaggttcaggtctgatctcaaatgtgat 19286610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 207
Target Start/End: Original strand, 29829328 - 29829450
Alignment:
Q  85 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 184  Q
    ||||||| ||||||||||| ||||||||| | || || ||  | || || ||| |||| |  |||||||| || || ||||||||||| ||||| |||||    
T  29829328 ctagaccaacttttcctcctataccaatgttgtacgcagaacttcttccaactttactccagagagggcattgtaccaccagacagggtaagcccccacc 29829427  T
Q  185 taatccgttgcctcccaggttcc 207  Q
    | ||||||||||||| |||||||    
T  29829428 tgatccgttgcctccaaggttcc 29829450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 21569 - 21716
Alignment:
Q  87 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 186  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||||| | ||||||| ||| |||||||||||||| |||||||||||||||||||    
T  21569 agacctacctttcctccgataccaatgctatatgccgagctgctcccgactttgcttctcaaaggacactgcacaaccaggcagggcaagcctccaccta 21668  T
Q  187 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    | | ||||||||||||||||| ||||||||||||||| ||| ||||||    
T  21669 acctgttgcctcccaggttccgttctgacctcaagtgcgatttccatc 21716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 2103 - 2018
Alignment:
Q  149 agggcactgcacaaccagacagggcaagcctccacctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 234  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  2103 agggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 2018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 6080 - 6160
Alignment:
Q  147 agagggcactgcacaaccagacagggcaagcctccacctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    |||||||| || || || |||||||||||||| |||||| ||||||||||||| ||||||   ||||| ||||| ||||||    
T  6080 agagggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 6160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 27297 - 27419
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27297 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 27396  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  27397 ctgatccgttgcctccaaggttc 27419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 29768 - 29890
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  29768 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 29867  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  29868 ctgatccgttgcctccaaggttc 29890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 40320 - 40198
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  40320 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 40221  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || |||||||||| |||||||||    
T  40220 ctgatccgttgccccccaggttc 40198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 47236 - 47114
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  47236 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 47137  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  47136 ctgatccgttgcctccaaggttc 47114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 9317 - 9195
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  9317 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 9218  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  9217 ctgatccgttgcctccaaggttc 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 20020 - 20142
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  20020 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 20119  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  20120 ctgatccgttgcctccaaggttc 20142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 381 - 258
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccg-agttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctcca 182  Q
    |||||||||||||| ||||||||||| ||| |||||||   |||| || |||||| |||| |  |||||||| || |||||||||||||||||||| |||    
T  381 gctagacctactttccctccgataccgatgttatatgctttagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagccccca 282  T
Q  183 cctaatccgttgcctcccaggttc 206  Q
    ||  ||||||||||||||| ||||    
T  281 ccggatccgttgcctcccaagttc 258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 7490 - 7368
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  7490 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 7391  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  7390 ctgatccgttgcctccaaggttc 7368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 26453 - 26338
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26453 gctaggcctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 26354  T
Q  184 ctaatccgttgcctcc 199  Q
    || |||||||||||||    
T  26353 ctgatccgttgcctcc 26338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 15181 - 15059
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||||||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  15181 gctagacctacttttcctcctataccaatgttgtatgcagatcttcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 15082  T
Q  184 ctaatccgttgcctcccaggttc 206  Q
    || ||||||||||||| ||||||    
T  15081 ctgatccgttgcctccaaggttc 15059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 7963 - 8076
Alignment:
Q  93 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 192  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || ||||| |||||||| |||||| ||||||    
T  7963 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 8062  T
Q  193 tgcctcccaggttc 206  Q
    ||||||| ||||||    
T  8063 tgcctccaaggttc 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 9571 - 9714
Alignment:
Q  84 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 183  Q
    |||||||| ||||||||||| ||||| ||| | ||||| ||  | || || |||||||| |  |||||||| || || || |||||||||||||| ||||    
T  9571 gctagaccaacttttcctcctatacctatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactagacagggcaagcccccac 9670  T
Q  184 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 227  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  9671 ctgatccgttgcctccaaggttcagatctgatctcaaatgtgat 9714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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