View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8606A_low_270 (Length: 230)

Name: NF8606A_low_270
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8606A_low_270
NF8606A_low_270
[»] chr7 (44 HSPs)
chr7 (124-201)||(24339641-24339719)
chr7 (135-225)||(11272545-11272637)
chr7 (124-176)||(25481901-25481953)
chr7 (131-178)||(26033467-26033514)
chr7 (124-178)||(28155569-28155623)
chr7 (131-178)||(5409842-5409889)
chr7 (124-179)||(13770690-13770745)
chr7 (132-178)||(3991331-3991377)
chr7 (124-178)||(7438705-7438759)
chr7 (124-178)||(11061082-11061136)
chr7 (133-178)||(9408340-9408385)
chr7 (125-178)||(9778500-9778553)
chr7 (131-178)||(18215192-18215239)
chr7 (131-178)||(21880158-21880205)
chr7 (131-178)||(43027475-43027522)
chr7 (132-178)||(11665446-11665492)
chr7 (133-178)||(18039006-18039052)
chr7 (124-178)||(24105677-24105731)
chr7 (132-178)||(27945048-27945094)
chr7 (124-182)||(43249992-43250050)
chr7 (125-178)||(19213803-19213856)
chr7 (125-178)||(19992001-19992054)
chr7 (124-169)||(29787384-29787429)
chr7 (132-176)||(7058433-7058477)
chr7 (124-168)||(32308119-32308163)
chr7 (132-175)||(8234153-8234196)
chr7 (143-178)||(21560521-21560556)
chr7 (124-171)||(23191895-23191942)
chr7 (132-178)||(32094026-32094073)
chr7 (132-226)||(35861971-35862056)
chr7 (131-169)||(2424620-2424658)
chr7 (124-178)||(7197303-7197357)
chr7 (132-174)||(11831439-11831481)
chr7 (132-170)||(13300417-13300455)
chr7 (124-178)||(20549790-20549844)
chr7 (124-178)||(26733303-26733357)
chr7 (128-169)||(11890934-11890975)
chr7 (131-176)||(30813818-30813863)
chr7 (125-158)||(42720916-42720949)
chr7 (133-178)||(2334256-2334303)
chr7 (143-175)||(13557750-13557782)
chr7 (125-178)||(21864806-21864861)
chr7 (124-168)||(30731036-30731080)
chr7 (134-178)||(40287363-40287406)
[»] chr5 (47 HSPs)
chr5 (125-201)||(39698541-39698618)
chr5 (124-178)||(21191062-21191116)
chr5 (126-178)||(21576751-21576803)
chr5 (132-178)||(6247629-6247675)
chr5 (124-178)||(14674268-14674322)
chr5 (124-201)||(19579700-19579778)
chr5 (124-178)||(31084322-31084376)
chr5 (124-178)||(42893359-42893413)
chr5 (124-176)||(43001799-43001851)
chr5 (124-178)||(7677704-7677758)
chr5 (124-178)||(13287405-13287459)
chr5 (124-201)||(21522749-21522827)
chr5 (124-201)||(21533315-21533393)
chr5 (133-178)||(24906307-24906352)
chr5 (124-199)||(3966502-3966578)
chr5 (125-169)||(6471904-6471948)
chr5 (132-226)||(21351864-21351957)
chr5 (124-203)||(37328824-37328904)
chr5 (131-178)||(7218273-7218320)
chr5 (131-178)||(8420033-8420080)
chr5 (132-201)||(21542037-21542107)
chr5 (132-178)||(30183556-30183602)
chr5 (132-178)||(33178032-33178078)
chr5 (124-178)||(41633734-41633788)
chr5 (133-182)||(5467980-5468029)
chr5 (132-177)||(15405062-15405107)
chr5 (126-178)||(17177029-17177081)
chr5 (124-172)||(27932234-27932282)
chr5 (132-176)||(4105264-4105310)
chr5 (143-178)||(15884006-15884041)
chr5 (124-178)||(2436921-2436975)
chr5 (131-177)||(6326304-6326350)
chr5 (132-178)||(10298576-10298622)
chr5 (124-178)||(28588680-28588734)
chr5 (124-178)||(15382476-15382532)
chr5 (133-182)||(25863212-25863261)
chr5 (133-201)||(30098334-30098403)
chr5 (133-182)||(31264446-31264495)
chr5 (124-169)||(39205879-39205924)
chr5 (132-169)||(40131628-40131665)
chr5 (125-178)||(41091263-41091316)
chr5 (126-179)||(131762-131817)
chr5 (126-182)||(7997168-7997224)
chr5 (124-160)||(26716143-26716179)
chr5 (124-160)||(26985883-26985919)
chr5 (126-178)||(30502394-30502446)
chr5 (126-178)||(30542737-30542789)
[»] chr6 (59 HSPs)
chr6 (124-199)||(16766696-16766772)
chr6 (125-178)||(28715295-28715348)
chr6 (124-199)||(9107354-9107430)
chr6 (124-178)||(7977836-7977890)
chr6 (132-178)||(8365525-8365571)
chr6 (132-178)||(10770680-10770726)
chr6 (126-226)||(21395267-21395365)
chr6 (132-178)||(34595141-34595187)
chr6 (124-177)||(12696323-12696376)
chr6 (132-177)||(31384927-31384972)
chr6 (124-175)||(17841598-17841649)
chr6 (131-178)||(31959165-31959212)
chr6 (124-178)||(1191706-1191760)
chr6 (132-178)||(1681765-1681811)
chr6 (124-201)||(5970090-5970168)
chr6 (132-178)||(7801162-7801208)
chr6 (132-178)||(9522898-9522944)
chr6 (132-178)||(16833315-16833361)
chr6 (121-174)||(25010212-25010265)
chr6 (132-176)||(8776981-8777025)
chr6 (131-178)||(28152105-28152151)
chr6 (124-178)||(426520-426574)
chr6 (132-178)||(853865-853911)
chr6 (132-182)||(2117083-2117133)
chr6 (124-178)||(7938115-7938169)
chr6 (133-178)||(403870-403915)
chr6 (125-178)||(6898287-6898340)
chr6 (125-178)||(9025500-9025553)
chr6 (126-178)||(9911534-9911587)
chr6 (124-177)||(17341671-17341724)
chr6 (131-176)||(17435205-17435250)
chr6 (124-169)||(19040351-19040396)
chr6 (126-178)||(7265599-7265651)
chr6 (133-226)||(7930313-7930406)
chr6 (124-178)||(3209380-3209435)
chr6 (133-176)||(4118341-4118384)
chr6 (124-178)||(4877941-4877996)
chr6 (124-201)||(8713978-8714057)
chr6 (124-167)||(10842531-10842574)
chr6 (134-169)||(16388248-16388283)
chr6 (124-178)||(24645479-24645534)
chr6 (125-176)||(32511674-32511725)
chr6 (124-178)||(32978905-32978960)
chr6 (124-178)||(9027177-9027231)
chr6 (132-178)||(15489738-15489784)
chr6 (132-177)||(17302563-17302609)
chr6 (124-178)||(26562688-26562742)
chr6 (124-158)||(33001315-33001349)
chr6 (131-172)||(2224232-2224273)
chr6 (133-178)||(6327524-6327569)
chr6 (132-169)||(7151419-7151456)
chr6 (124-169)||(7996393-7996438)
chr6 (124-169)||(8022363-8022408)
chr6 (124-169)||(9658878-9658923)
chr6 (132-169)||(34225824-34225861)
chr6 (125-182)||(34446565-34446622)
chr6 (126-167)||(13632013-13632056)
chr6 (126-178)||(30866150-30866202)
chr6 (133-169)||(31579240-31579276)
[»] chr4 (51 HSPs)
chr4 (126-178)||(29205445-29205497)
chr4 (124-178)||(21945502-21945556)
chr4 (124-178)||(23292992-23293046)
chr4 (131-177)||(28964255-28964301)
chr4 (124-177)||(3947773-3947826)
chr4 (131-176)||(11596360-11596405)
chr4 (125-182)||(37203264-37203321)
chr4 (132-176)||(19482675-19482719)
chr4 (132-178)||(54580029-54580075)
chr4 (133-178)||(6485617-6485662)
chr4 (124-177)||(38847019-38847072)
chr4 (131-178)||(12895122-12895169)
chr4 (124-178)||(30298945-30299000)
chr4 (124-178)||(30327813-30327868)
chr4 (131-178)||(47263992-47264039)
chr4 (124-178)||(49431024-49431079)
chr4 (125-176)||(51701258-51701309)
chr4 (124-178)||(2361981-2362035)
chr4 (132-226)||(4383375-4383471)
chr4 (124-178)||(8423724-8423778)
chr4 (124-182)||(11651136-11651194)
chr4 (132-178)||(12797344-12797389)
chr4 (124-182)||(24343506-24343564)
chr4 (124-176)||(715615-715668)
chr4 (124-176)||(752941-752994)
chr4 (133-178)||(12895280-12895325)
chr4 (125-169)||(15029765-15029809)
chr4 (124-182)||(20633484-20633539)
chr4 (132-176)||(40481644-40481687)
chr4 (131-201)||(847957-848028)
chr4 (143-178)||(2626021-2626056)
chr4 (124-183)||(14126112-14126171)
chr4 (132-171)||(14465088-14465127)
chr4 (126-169)||(15659775-15659818)
chr4 (133-176)||(27706185-27706228)
chr4 (143-178)||(42640547-42640582)
chr4 (135-169)||(18576052-18576086)
chr4 (124-182)||(22440602-22440660)
chr4 (132-178)||(24613707-24613753)
chr4 (124-177)||(28084520-28084574)
chr4 (132-178)||(35157991-35158037)
chr4 (124-178)||(40613449-40613503)
chr4 (133-178)||(16073403-16073447)
chr4 (121-178)||(30982884-30982941)
chr4 (124-169)||(32910550-32910595)
chr4 (132-169)||(36635331-36635368)
chr4 (133-169)||(903930-903966)
chr4 (133-169)||(6863161-6863197)
chr4 (124-168)||(38148741-38148785)
chr4 (133-169)||(40179651-40179687)
chr4 (125-169)||(56257933-56257977)
[»] chr3 (61 HSPs)
chr3 (124-178)||(49651792-49651846)
chr3 (125-178)||(26508110-26508163)
chr3 (124-176)||(4987299-4987351)
chr3 (131-178)||(28918007-28918054)
chr3 (132-201)||(14209120-14209190)
chr3 (124-178)||(34185129-34185183)
chr3 (124-182)||(35994740-35994797)
chr3 (125-178)||(1509539-1509592)
chr3 (125-178)||(21256992-21257045)
chr3 (125-178)||(51206359-51206412)
chr3 (128-176)||(25948895-25948943)
chr3 (132-226)||(34910324-34910422)
chr3 (124-178)||(7928449-7928503)
chr3 (132-178)||(10954959-10955005)
chr3 (124-178)||(21479117-21479171)
chr3 (132-178)||(41961656-41961702)
chr3 (132-178)||(55401082-55401128)
chr3 (124-177)||(10268493-10268546)
chr3 (125-182)||(34307782-34307839)
chr3 (124-176)||(3164033-3164085)
chr3 (124-168)||(14979180-14979224)
chr3 (134-178)||(20503474-20503518)
chr3 (126-177)||(11610522-11610573)
chr3 (131-201)||(14832105-14832176)
chr3 (132-178)||(750624-750670)
chr3 (124-178)||(4990973-4991027)
chr3 (124-178)||(8383256-8383310)
chr3 (136-178)||(8587027-8587069)
chr3 (124-178)||(8789556-8789610)
chr3 (132-201)||(14216899-14216969)
chr3 (132-201)||(14223028-14223098)
chr3 (124-178)||(15796300-15796354)
chr3 (124-182)||(24205043-24205101)
chr3 (133-178)||(25775516-25775562)
chr3 (124-178)||(27505245-27505299)
chr3 (132-178)||(28812522-28812568)
chr3 (132-169)||(18426956-18426993)
chr3 (131-174)||(26492215-26492258)
chr3 (124-159)||(40052331-40052366)
chr3 (125-178)||(8593136-8593190)
chr3 (131-169)||(11251984-11252022)
chr3 (124-173)||(14747560-14747610)
chr3 (124-178)||(14829689-14829742)
chr3 (132-178)||(16000022-16000068)
chr3 (132-178)||(17005625-17005671)
chr3 (132-178)||(29508451-29508497)
chr3 (124-178)||(55212962-55213016)
chr3 (124-169)||(11313815-11313860)
chr3 (121-182)||(12704659-12704720)
chr3 (124-169)||(23870574-23870619)
chr3 (132-169)||(24633773-24633810)
chr3 (124-169)||(25064908-25064953)
chr3 (133-182)||(25365470-25365519)
chr3 (126-201)||(1550141-1550217)
chr3 (133-169)||(4201404-4201440)
chr3 (144-176)||(7171520-7171552)
chr3 (134-178)||(8930836-8930880)
chr3 (125-169)||(9624641-9624685)
chr3 (125-169)||(10690277-10690321)
chr3 (125-169)||(15544693-15544737)
chr3 (125-169)||(27277853-27277897)
[»] chr2 (46 HSPs)
chr2 (124-178)||(30404856-30404910)
chr2 (124-176)||(38117167-38117219)
chr2 (131-178)||(30717536-30717583)
chr2 (125-178)||(2438725-2438778)
chr2 (124-177)||(21374706-21374759)
chr2 (124-203)||(37419742-37419822)
chr2 (124-178)||(20539680-20539734)
chr2 (124-178)||(37558976-37559030)
chr2 (125-178)||(11223869-11223922)
chr2 (124-169)||(28677908-28677953)
chr2 (124-177)||(39323263-39323316)
chr2 (132-178)||(19536403-19536450)
chr2 (132-178)||(974754-974800)
chr2 (133-167)||(5473336-5473370)
chr2 (132-178)||(12668429-12668475)
chr2 (132-178)||(12940941-12940987)
chr2 (132-178)||(15657871-15657917)
chr2 (132-178)||(18841019-18841065)
chr2 (133-178)||(15972881-15972926)
chr2 (133-178)||(18421971-18422016)
chr2 (124-169)||(21616761-21616806)
chr2 (124-169)||(21782833-21782878)
chr2 (132-177)||(33153431-33153476)
chr2 (131-202)||(4882677-4882749)
chr2 (124-176)||(24894388-24894440)
chr2 (124-178)||(14996229-14996284)
chr2 (131-178)||(5040738-5040787)
chr2 (124-178)||(6940254-6940308)
chr2 (132-178)||(20473329-20473375)
chr2 (133-178)||(23058448-23058494)
chr2 (124-178)||(23718025-23718079)
chr2 (124-178)||(24105697-24105751)
chr2 (132-178)||(26769518-26769564)
chr2 (132-178)||(30335424-30335470)
chr2 (124-178)||(34221503-34221557)
chr2 (132-178)||(36756350-36756396)
chr2 (124-178)||(37411250-37411304)
chr2 (124-178)||(42832282-42832336)
chr2 (124-181)||(10535762-10535819)
chr2 (124-169)||(18276520-18276565)
chr2 (124-177)||(21091722-21091775)
chr2 (124-169)||(31808076-31808121)
chr2 (124-169)||(36409642-36409687)
chr2 (125-178)||(44860320-44860373)
chr2 (126-178)||(18420440-18420492)
chr2 (133-169)||(28412358-28412394)
[»] scaffold0223 (1 HSPs)
scaffold0223 (124-177)||(20171-20224)
[»] chr8 (48 HSPs)
chr8 (125-201)||(21465412-21465489)
chr8 (125-178)||(25566841-25566894)
chr8 (134-226)||(17468459-17468558)
chr8 (132-201)||(2572038-2572108)
chr8 (132-178)||(4948659-4948705)
chr8 (124-201)||(22651975-22652053)
chr8 (124-181)||(41831943-41832000)
chr8 (131-178)||(8342978-8343025)
chr8 (131-177)||(8343322-8343368)
chr8 (124-178)||(18407718-18407772)
chr8 (124-178)||(29510310-29510364)
chr8 (131-177)||(30077394-30077440)
chr8 (133-178)||(20873077-20873122)
chr8 (125-178)||(40332191-40332244)
chr8 (124-226)||(13436924-13437024)
chr8 (124-176)||(22595993-22596045)
chr8 (132-176)||(36450762-36450806)
chr8 (126-177)||(22197749-22197800)
chr8 (124-175)||(30271300-30271351)
chr8 (124-178)||(4298892-4298946)
chr8 (132-178)||(15816135-15816181)
chr8 (124-178)||(24613520-24613573)
chr8 (124-201)||(28745497-28745575)
chr8 (132-201)||(29447092-29447162)
chr8 (124-178)||(34897084-34897138)
chr8 (124-182)||(41838125-41838183)
chr8 (124-182)||(44067515-44067573)
chr8 (131-169)||(3025557-3025595)
chr8 (124-174)||(4673435-4673485)
chr8 (124-178)||(5813591-5813645)
chr8 (126-176)||(7442846-7442896)
chr8 (124-178)||(11927092-11927146)
chr8 (124-178)||(13844602-13844656)
chr8 (132-178)||(20679401-20679447)
chr8 (124-178)||(25192353-25192407)
chr8 (124-158)||(27101514-27101548)
chr8 (124-178)||(31236583-31236637)
chr8 (124-174)||(31556996-31557045)
chr8 (124-169)||(4611533-4611578)
chr8 (121-178)||(12606835-12606892)
chr8 (132-169)||(14134706-14134743)
chr8 (124-169)||(24362217-24362262)
chr8 (133-178)||(24669441-24669486)
chr8 (125-174)||(28642408-28642457)
chr8 (124-169)||(36934669-36934714)
chr8 (124-169)||(39954294-39954339)
chr8 (125-169)||(14731712-14731756)
chr8 (126-158)||(35519833-35519865)
[»] scaffold0103 (1 HSPs)
scaffold0103 (124-176)||(51810-51862)
[»] chr1 (65 HSPs)
chr1 (124-176)||(113298-113350)
chr1 (124-226)||(35702556-35702648)
chr1 (132-178)||(24577192-24577238)
chr1 (124-178)||(38078667-38078721)
chr1 (125-178)||(1486715-1486768)
chr1 (125-178)||(22515893-22515946)
chr1 (133-178)||(40258939-40258984)
chr1 (133-201)||(47989505-47989574)
chr1 (134-178)||(18337338-18337382)
chr1 (126-178)||(31015044-31015096)
chr1 (132-178)||(1704998-1705044)
chr1 (133-202)||(6612152-6612222)
chr1 (132-178)||(18190114-18190160)
chr1 (124-178)||(21378577-21378631)
chr1 (132-178)||(22881622-22881668)
chr1 (124-174)||(31672905-31672955)
chr1 (132-178)||(42359455-42359501)
chr1 (124-178)||(46348389-46348443)
chr1 (124-169)||(398780-398825)
chr1 (126-178)||(48450593-48450645)
chr1 (132-178)||(51410031-51410078)
chr1 (124-182)||(3490392-3490450)
chr1 (132-178)||(10572595-10572641)
chr1 (124-178)||(19058862-19058916)
chr1 (132-178)||(28273094-28273140)
chr1 (124-178)||(36878460-36878514)
chr1 (124-178)||(41877476-41877530)
chr1 (133-178)||(1815265-1815310)
chr1 (124-169)||(5898281-5898326)
chr1 (124-176)||(13011223-13011276)
chr1 (124-177)||(14359529-14359581)
chr1 (124-178)||(18471297-18471353)
chr1 (124-169)||(23738677-23738722)
chr1 (132-177)||(32434723-32434768)
chr1 (126-178)||(9709821-9709873)
chr1 (124-168)||(12443476-12443520)
chr1 (126-182)||(22794080-22794136)
chr1 (131-199)||(31694694-31694765)
chr1 (132-176)||(32461471-32461515)
chr1 (125-169)||(40181871-40181915)
chr1 (126-177)||(5927347-5927398)
chr1 (125-178)||(17778549-17778599)
chr1 (135-201)||(25361896-25361963)
chr1 (135-201)||(44482240-44482307)
chr1 (124-178)||(1864886-1864940)
chr1 (124-178)||(5376506-5376560)
chr1 (131-178)||(5944287-5944336)
chr1 (132-174)||(6332678-6332719)
chr1 (124-178)||(9629906-9629960)
chr1 (131-169)||(16927200-16927238)
chr1 (124-166)||(17754310-17754352)
chr1 (124-174)||(18556466-18556516)
chr1 (132-178)||(37598839-37598884)
chr1 (124-165)||(2896140-2896181)
chr1 (132-169)||(7918226-7918263)
chr1 (131-176)||(11605943-11605988)
chr1 (124-169)||(19324561-19324606)
chr1 (124-169)||(25098570-25098615)
chr1 (131-176)||(27471574-27471619)
chr1 (124-177)||(29144365-29144418)
chr1 (132-169)||(34298443-34298480)
chr1 (132-168)||(9828051-9828087)
chr1 (133-177)||(15323171-15323215)
chr1 (124-172)||(16297295-16297343)
chr1 (124-199)||(17831518-17831591)
[»] scaffold0652 (1 HSPs)
scaffold0652 (124-178)||(468-522)
[»] scaffold0136 (1 HSPs)
scaffold0136 (124-201)||(3831-3909)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-175)||(14537-14580)
[»] scaffold0066 (1 HSPs)
scaffold0066 (124-182)||(33366-33423)
[»] scaffold0027 (1 HSPs)
scaffold0027 (124-178)||(46681-46735)
[»] scaffold0021 (1 HSPs)
scaffold0021 (124-178)||(130481-130535)
[»] scaffold0011 (1 HSPs)
scaffold0011 (132-178)||(17755-17801)
[»] scaffold0018 (2 HSPs)
scaffold0018 (124-177)||(192256-192309)
scaffold0018 (132-177)||(178825-178871)
[»] scaffold0004 (2 HSPs)
scaffold0004 (124-177)||(92806-92859)
scaffold0004 (126-178)||(123626-123681)
[»] scaffold0450 (1 HSPs)
scaffold0450 (132-202)||(8616-8687)
[»] scaffold0053 (1 HSPs)
scaffold0053 (124-178)||(8797-8851)
[»] scaffold0050 (1 HSPs)
scaffold0050 (124-178)||(70277-70331)
[»] scaffold0025 (1 HSPs)
scaffold0025 (133-178)||(23777-23823)
[»] scaffold0020 (1 HSPs)
scaffold0020 (124-178)||(135318-135372)
[»] scaffold0793 (1 HSPs)
scaffold0793 (124-176)||(4891-4944)
[»] scaffold0722 (1 HSPs)
scaffold0722 (124-176)||(7040-7092)
[»] scaffold0246 (1 HSPs)
scaffold0246 (132-176)||(19583-19626)
[»] scaffold0049 (1 HSPs)
scaffold0049 (126-178)||(63774-63826)
[»] scaffold0044 (1 HSPs)
scaffold0044 (134-178)||(53189-53233)
[»] scaffold0008 (1 HSPs)
scaffold0008 (126-201)||(263354-263430)
[»] scaffold0019 (1 HSPs)
scaffold0019 (124-199)||(71722-71800)
[»] scaffold1528 (1 HSPs)
scaffold1528 (124-166)||(1034-1076)
[»] scaffold0306 (1 HSPs)
scaffold0306 (132-178)||(13407-13453)
[»] scaffold0152 (1 HSPs)
scaffold0152 (132-178)||(21874-21920)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-178)||(241593-241647)
[»] scaffold0236 (1 HSPs)
scaffold0236 (125-178)||(25774-25827)
[»] scaffold0168 (1 HSPs)
scaffold0168 (125-178)||(21043-21096)
[»] scaffold0123 (1 HSPs)
scaffold0123 (125-178)||(44531-44584)
[»] scaffold0227 (1 HSPs)
scaffold0227 (132-176)||(7319-7363)
[»] scaffold0171 (1 HSPs)
scaffold0171 (143-202)||(23529-23589)


Alignment Details
Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 24339641 - 24339719
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  24339641 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 24339719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 11272637 - 11272545
Alignment:
Q  135 ataatttgaaaaaatcacata--attcggtgtaattacaagtgtcg-tgtctagtcagtgtcggacacgatgggacacgcctaatccgaggagt 225  Q
    |||||||||||||||||||||  |||| |||||||||||||||||| ||||  ||| ||||||||||||  |||||||||||||||||||||||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgc-gggacacgcctaatccgaggagt 11272545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 25481901 - 25481953
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  25481901 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 26033514 - 26033467
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 28155569 - 28155623
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  28155569 cgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcg 28155623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 5409889 - 5409842
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5409889 gctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcg 5409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 13770690 - 13770745
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgt 179  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  13770690 cgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgt 13770745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 3991331 - 3991377
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  3991331 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 3991377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 7438705 - 7438759
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | |||||||||||||||||||||||||||  |||||||||||||||||    
T  7438705 cgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 7438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 11061136 - 11061082
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||||  || |||||||||||||||    
T  11061136 cgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 9408385 - 9408340
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 9778500 - 9778553
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||||||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcg 9778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 18215239 - 18215192
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  18215239 gctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcg 18215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 21880158 - 21880205
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 43027522 - 43027475
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||    
T  43027522 gctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcg 43027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 11665492 - 11665446
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcg 11665446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 18039006 - 18039052
Alignment:
Q  133 taataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 18039052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 24105677 - 24105731
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  24105677 cgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 27945048 - 27945094
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 43249992 - 43250050
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||||| ||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  43249992 cgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 43250050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 19213803 - 19213856
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||| ||||||||||||||| | |||||| |||||||||||    
T  19213803 gacactgctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcg 19213856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 19992001 - 19992054
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 29787429 - 29787384
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  29787429 cgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 7058433 - 7058477
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||    
T  7058433 ctaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 32308119 - 32308163
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 168  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  32308119 cgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 8234153 - 8234196
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtg 175  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||    
T  8234153 ctaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 21560521 - 21560556
Alignment:
Q  143 aaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcg 21560556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 23191895 - 23191942
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattaca 171  Q
    |||||| ||||||||||||| ||||||||||| ||| |||||||||||    
T  23191895 cgacaccgctaataatttgagaaaatcacatatttcagtgtaattaca 23191942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 32094073 - 32094026
Alignment:
Q  132 ctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  32094073 ctaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcg 32094026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 35861971 - 35862056
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgaggagtg 226  Q
    ||||||||||||||||||||||||||||  |||||||  ||||||| |||||        |||||||||||  |||||||||||||||||||||||    
T  35861971 ctaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtc--------gtcggacacga--ggacacgcctaatccgaggagtg 35862056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 2424620 - 2424658
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaatta 2424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 7197357 - 7197303
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||| |||||||||  ||||||  |||||||||||||||||    
T  7197357 cgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcg 7197303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 11831439 - 11831481
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    |||||||||||||||||||| ||||||  ||||||||||||||    
T  11831439 ctaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 13300417 - 13300455
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattac 170  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  13300417 ctaataatttgaaaaaatcatataattcagtgtaattac 13300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 20549790 - 20549844
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| |||||||| |||||| ||||||||| | ||||||    
T  20549790 cgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 26733303 - 26733357
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||| | ||||||    
T  26733303 cgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcg 26733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 11890975 - 11890934
Alignment:
Q  128 acggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||| ||||||||||||||||||| ||||||| |||||||||    
T  11890975 acggttaataatttgaaaaaatcatataattcagtgtaatta 11890934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 30813818 - 30813863
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||| ||||| ||||||||| ||||||||||| ||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaattacaggtgt 30813863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 42720949 - 42720916
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataatt 158  Q
    ||||| ||||||||||||||||||||||||||||    
T  42720949 gacaccgctaataatttgaaaaaatcacataatt 42720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 2334256 - 2334303
Alignment:
Q  133 taataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  2334256 taataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcg 2334303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 13557782 - 13557750
Alignment:
Q  143 aaaaaatcacataattcggtgtaattacaagtg 175  Q
    ||||||||||||||||| |||||||||||||||    
T  13557782 aaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 21864806 - 21864861
Alignment:
Q  125 gacacggctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||  ||| ||||||  ||||||||||||||||||    
T  21864806 gacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcg 21864861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 30731036 - 30731080
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 168  Q
    |||||| || |||||||||| ||||||||||||||| ||||||||    
T  30731036 cgacaccgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 40287406 - 40287363
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  40287406 aataatttgaaaaaatcatata-ttcagtgtaattacaagtgtcg 40287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 39698541 - 39698618
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  39698541 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 39698618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 21191116 - 21191062
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21191116 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 21576803 - 21576751
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 6247629 - 6247675
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 14674268 - 14674322
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14674268 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 19579700 - 19579778
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||| ||||||||||||| ||||||||||||||  ||| ||||||||||||| |||||  |||||||||||||||||    
T  19579700 cgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacga 19579778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 31084322 - 31084376
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  31084322 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 42893359 - 42893413
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  42893359 cgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcg 42893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 43001799 - 43001851
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43001799 cgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 7677704 - 7677758
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  7677704 cgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcg 7677758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 13287459 - 13287405
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||||||||||||||||||| |||||| |||||||||||    
T  13287459 cgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 21522749 - 21522827
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||| |||| |||||  ||| |||||||||||||    
T  21522749 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21522827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 21533315 - 21533393
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||| |||| |||||  ||| |||||||||||||    
T  21533315 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21533393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 24906352 - 24906307
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  24906352 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 3966502 - 3966578
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 199  Q
    |||||| ||||||||||||| ||||||||| ||||| ||||||||| | ||||| |||||  |||||||||||||||    
T  3966502 cgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 6471948 - 6471904
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaatta 6471904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 21351957 - 21351864
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgaggagtg 226  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||| |||||  ||| ||||| |||||  ||| ||||| ||||||||| |||||    
T  21351957 ctaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac--tggaacacgtctaatccgaagagtg 21351864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 37328904 - 37328824
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatg 203  Q
    |||||| || ||||||||| |||||||||| ||||| ||||||||||| ||||| |||||  ||| |||||||||||||||    
T  37328904 cgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatg 37328824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 7218320 - 7218273
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||||    
T  7218320 gctaataatttaaataaatcacataattcagtgtaattacaagtgtcg 7218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 8420033 - 8420080
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  8420033 gctaataatttgaaaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 21542037 - 21542107
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||||||| |||| || ||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  21542037 ctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 21542107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 30183556 - 30183602
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  30183556 ctaataatttgaaaatatcacattattcggtttaattacaagtgtcg 30183602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 33178032 - 33178078
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  33178032 ctaataatttaaaaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 41633734 - 41633788
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  41633734 cgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcg 41633788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 5468029 - 5467980
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||||||| ||||||||||||||| ||||||||| | ||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattataggtgtcgtgtc 5467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 15405107 - 15405062
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||    
T  15405107 ctaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 17177081 - 17177029
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||||||||||| | |||||  |||||||||||||||||    
T  17177081 acacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 27932234 - 27932282
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaa 172  Q
    |||||| ||||||||||||| ||||| ||||||||| ||||||||||||    
T  27932234 cgacaccgctaataatttgagaaaattacataattcagtgtaattacaa 27932282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 4105264 - 4105310
Alignment:
Q  132 ctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgt 176  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||    
T  4105264 ctaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 15884006 - 15884041
Alignment:
Q  143 aaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcg 15884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 2436921 - 2436975
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||| ||||||||||||||||| ||| |||| | ||||||    
T  2436921 cgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcg 2436975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 6326350 - 6326304
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||| |||||||| ||||| ||||||||| |||||||||||||||||    
T  6326350 gctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 10298576 - 10298622
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||| ||||||||| |  |||||||||||||||||    
T  10298576 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 10298622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 28588734 - 28588680
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  28588734 cgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 15382476 - 15382532
Alignment:
Q  124 cgacacggctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||  ||| ||||||| || |||||||||||||||    
T  15382476 cgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcg 15382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 25863212 - 25863261
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||||||| ||||| | ||||||| ||||||||| ||||||||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtc 25863261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 30098334 - 30098403
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    ||||||||||| |||||||||||||||  |||||||| |  |||| || || ||||||||||||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacga 30098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||||||| ||||| ||||||||| ||||||| | ||||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 39205879 - 39205924
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaatta 39205924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 40131628 - 40131665
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||||||||||||||||||| || ||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaatta 40131665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| |||||| |||||| ||||||||||||||| ||||||||| | ||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 131762 - 131817
Alignment:
Q  126 acacggctaataatttgaaaaaatcac--ataattcggtgtaattacaagtgtcgt 179  Q
    |||| ||||||||||||||||||||||  ||||||  ||||||||||||| |||||    
T  131762 acacagctaataatttgaaaaaatcacatataattaagtgtaattacaagcgtcgt 131817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 7997224 - 7997168
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||| ||||| | ||||| | ||||||||| ||||||||||||    
T  7997224 acacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtc 7997168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 26716143 - 26716179
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcg 160  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26716143 cgacactgctaataatttgagaaaatcacataattcg 26716179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 26985883 - 26985919
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcg 160  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26985883 cgacactgctaataatttgagaaaatcacataattcg 26985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 30502446 - 30502394
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| |||||||| |||||| ||||||||| | ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 30542789 - 30542737
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| |||||||| |||||| ||||||||| | ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 16766696 - 16766772
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 199  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||    
T  16766696 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 28715295 - 28715348
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 28715348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 9107430 - 9107354
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 199  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||  ||| |||||||||||    
T  9107430 cgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 9107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 7977890 - 7977836
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  7977890 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 8365571 - 8365525
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  8365571 ctaataatttgaaaatatcacataattcggtgtaattacaagtgtcg 8365525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 10770726 - 10770680
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10770726 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 10770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 21395365 - 21395267
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgaggag 224  Q
    |||| ||||||||||||| ||||| ||||||||  ||||||||||||||||| |||||  ||||||||||||||| |  ||||||||||||||| |||||    
T  21395365 acaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacacca--ggacacgcctaatccaaggag 21395269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 34595141 - 34595187
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  34595141 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 12696323 - 12696376
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  12696323 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 31384927 - 31384972
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 17841649 - 17841598
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtg 175  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  17841649 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 31959165 - 31959212
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  31959165 gctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 1191760 - 1191706
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1191760 cgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 1681765 - 1681811
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1681765 ctaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 5970168 - 5970090
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 201  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||| |||  |||||  ||| |||||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacga 5970090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 7801208 - 7801162
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||    
T  7801208 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 7801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 16833315 - 16833361
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  16833315 ctaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 25010265 - 25010212
Alignment:
Q  121 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    ||||||||| ||||||||||||||||||||||||||||| | || |||||||||    
T  25010265 acacgacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 8777025 - 8776981
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  8777025 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28152105 - 28152151
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28152105 gctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcg 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 426574 - 426520
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||||||||||||||||||   |||||||||||||||||    
T  426574 cgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 853911 - 853865
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||    
T  853911 ctaataatttgaaaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 2117083 - 2117133
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||||||||||||||||||||||||  || ||||| ||||||||||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtc 2117133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 7938115 - 7938169
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  7938115 cgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 403915 - 403870
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcg 403870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 6898340 - 6898287
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| |||| ||||||||  ||||||||||||||||||    
T  6898340 gacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcg 6898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 9025553 - 9025500
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 9911587 - 9911534
Alignment:
Q  126 acacggctaataatttgaaa-aaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcg 9911534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 17341724 - 17341671
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  17341724 cgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 17435205 - 17435250
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  17435205 gctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 19040351 - 19040396
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  19040351 cgacaccgctaataatttgagaaaatcacataattcagtgtaatta 19040396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 7265651 - 7265599
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 7930313 - 7930406
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg-tgtctagtca-gtgtcggacacgatgggacacgcctaatccgaggagtg 226  Q
    ||||||||||||||||||||||||||  ||| |||| ||||||||| ||||  |||| ||||| ||||| |  ||||||||||||| |||||||||    
T  7930313 taataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtcacgtgtccgacacca--ggacacgcctaattcgaggagtg 7930406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 3209380 - 3209435
Alignment:
Q  124 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||| ||||||||||||  |||| |||||||||||||    
T  3209380 cgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcg 3209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||||||||||||||   |||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 4877941 - 4877996
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||| ||||||||||  || |||||||||||||||    
T  4877941 cgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcg 4877996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 8713978 - 8714057
Alignment:
Q  124 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 201  Q
    |||||| | |||||||||||||| ||||||||||||| |||||||||||| |||  |||||  ||| |||||||||||||    
T  8713978 cgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacga 8714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 10842531 - 10842574
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaat 167  Q
    |||||| ||||||||||||||||||||||||||||  |||||||    
T  10842531 cgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 16388283 - 16388248
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||||||||||||||||| |||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 24645479 - 24645534
Alignment:
Q  124 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||| ||||||||||||| || || ||||||||||||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcg 24645534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 32511725 - 32511674
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||||| ||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 32978960 - 32978905
Alignment:
Q  124 cgacacggctaataatttgaaaaaat-cacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||  |||||||||  ||||||||||||||||||    
T  32978960 cgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcg 32978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 9027177 - 9027231
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| | ||||||||||||| ||||||||| | ||||||    
T  9027177 cgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg 9027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 15489784 - 15489738
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||| |||||  |||||||||||||||||    
T  15489784 ctaataatttgaaaaaattacacaattcaatgtaattacaagtgtcg 15489738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 17302563 - 17302609
Alignment:
Q  132 ctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtc 177  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||    
T  17302563 ctaataatttgaaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 26562688 - 26562742
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||| ||||||| ||||||||||||||| ||||||||| | ||||||    
T  26562688 cgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 33001349 - 33001315
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataatt 158  Q
    |||||| ||||||||||||||||||||||||||||    
T  33001349 cgacactgctaataatttgaaaaaatcacataatt 33001315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 2224232 - 2224273
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaa 172  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||    
T  2224232 gctaataatttaaaaaaatcatataattcagtgtaattacaa 2224273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 6327569 - 6327524
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||    
T  6327569 taataatttgaaaaaattatataattaagtgtaattacaagtgtcg 6327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 7151419 - 7151456
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||||||||||||||||||  |||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaatta 7151456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 7996438 - 7996393
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  7996438 cgacactgctaataatttgagaaaatcatataattcagtgtaatta 7996393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 8022363 - 8022408
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  8022363 cgacactgctaataatttgagaaaatcatataattcagtgtaatta 8022408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 9658878 - 9658923
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||| | ||||||||||||||| |||||||||    
T  9658878 cgacaccgctaataatttaagaaaatcacataattcagtgtaatta 9658923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 34225861 - 34225824
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  34225861 ctaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 34446565 - 34446622
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||| ||||||||||| ||||| ||||||||| ||||||| | | ||||||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 34446622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 13632056 - 13632013
Alignment:
Q  126 acacggctaataatttgaaaaaatcacata--attcggtgtaat 167  Q
    |||| |||||||||||||||||||||||||  ||||||||||||    
T  13632056 acactgctaataatttgaaaaaatcacataatattcggtgtaat 13632013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 30866202 - 30866150
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| |||||||||||||||  |||||||| | ||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 31579276 - 31579240
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaatta 31579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 29205445 - 29205497
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 21945502 - 21945556
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  21945502 cgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 23293046 - 23292992
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  23293046 cgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 23292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 28964301 - 28964255
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  28964301 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 3947826 - 3947773
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  3947826 cgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtc 3947773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 11596405 - 11596360
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11596405 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 37203264 - 37203321
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtc 37203321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 19482675 - 19482719
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  19482675 ctaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 54580075 - 54580029
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 38847072 - 38847019
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  38847072 cgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 12895169 - 12895122
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||    
T  12895169 gctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcg 12895122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 30298945 - 30299000
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  30298945 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 30327813 - 30327868
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  30327813 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 47263992 - 47264039
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||||    
T  47263992 gctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcg 47264039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 49431024 - 49431079
Alignment:
Q  124 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  49431024 cgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 51701258 - 51701309
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||||||||||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 2362035 - 2361981
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||||| ||||||||    
T  2362035 cgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcg 2361981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 4383375 - 4383471
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacg--atgggacacgcctaatccgaggagtg 226  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||| |||||  ||| |||||  |||||  |  |||||||||||||||||||||||    
T  4383375 ctaataatttgaaaa-atcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacaccggacacgcctaatccgaggagtg 4383471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 8423778 - 8423724
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  8423778 cgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcg 8423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 11651194 - 11651136
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||| ||||||||||||||||| ||| || ||||||||| |||||    
T  11651194 cgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtc 11651136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 12797389 - 12797344
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12797389 ctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcg 12797344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 24343506 - 24343564
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||||| ||||||||||| ||||| ||||||||| ||||||||| | ||||||||||    
T  24343506 cgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtc 24343564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 715668 - 715615
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  715668 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 752994 - 752941
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  752994 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 12895325 - 12895280
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcg 12895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 15029765 - 15029809
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||    
T  15029765 gacactgctaataatttgaaaatatcacataattcagtgtaatta 15029809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 20633484 - 20633539
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||||||||||   ||||||||  |||||||||||||||||||||    
T  20633484 cgacaccgctaataatttgaaaaaa---cataattcaatgtaattacaagtgtcgtgtc 20633539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 40481644 - 40481687
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  40481644 ctaataatttgaaaa-atcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 847957 - 848028
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    ||||||||||||| ||||| |||||||||  | |||||||||||||| |||||| ||  |||||||||||||    
T  847957 gctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacga 848028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 2626056 - 2626021
Alignment:
Q  143 aaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2626056 aaaaaatcacataattcggtgtaattacacgtgtcg 2626021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 14126171 - 14126112
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtct 183  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||||| ||||||| |||||    
T  14126171 cgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtcatgtct 14126112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 14465127 - 14465088
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattaca 171  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  14465127 ctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 15659818 - 15659775
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  15659818 acactgctaataatttgagaaaatctcataattcggtgtaatta 15659775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 27706228 - 27706185
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||    
T  27706228 taataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 42640547 - 42640582
Alignment:
Q  143 aaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcg 42640582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 18576086 - 18576052
Alignment:
Q  135 ataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||| |||||||||||||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaatta 18576052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 22440660 - 22440602
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||| ||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgacgtgtc 22440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 24613753 - 24613707
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| |||||||||||||||  ||||| |||||||||||    
T  24613753 ctaataatttgagaaaatcacataattcaatgtaagtacaagtgtcg 24613707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 28084520 - 28084574
Alignment:
Q  124 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||| |||||||||| |||||||||||||  ||||||||||||||||    
T  28084520 cgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 35158037 - 35157991
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||||||    
T  35158037 ctaataatttggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 40613449 - 40613503
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||    
T  40613449 cgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 16073403 - 16073447
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||    
T  16073403 taataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcg 16073447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 30982941 - 30982884
Alignment:
Q  121 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||| |||||| |||||| ||||||||||| ||| ||||||||| ||||||||    
T  30982941 acacgccaccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcg 30982884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 32910550 - 32910595
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||| ||||||||||| ||||| ||||||||| |||||||||    
T  32910550 cgacacggataataatttgagaaaatgacataattcagtgtaatta 32910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 36635331 - 36635368
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 903930 - 903966
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaatta 903966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 6863161 - 6863197
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  6863161 taataatttgaaaaaatcatataattcggtgcaatta 6863197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 38148785 - 38148741
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 168  Q
    |||||| ||||||| ||||| ||||||||||||||| ||||||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgtaatt 38148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 40179687 - 40179651
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaatta 40179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 56257933 - 56257977
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaatta 56257977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 49651846 - 49651792
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  49651846 cgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcg 49651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 26508110 - 26508163
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 4987351 - 4987299
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4987351 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28918007 - 28918054
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28918007 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 14209120 - 14209190
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 14209190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 34185183 - 34185129
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  34185183 cgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcg 34185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 35994797 - 35994740
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  35994797 cgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcgtgtc 35994740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 1509539 - 1509592
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 1509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 21257045 - 21256992
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 51206412 - 51206359
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcg 51206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 25948943 - 25948895
Alignment:
Q  128 acggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  25948943 acggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 34910324 - 34910422
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga---tgggacacgcctaatccgaggagtg 226  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||   || |||||||||| ||    |||||||| |||||||||||||||    
T  34910324 ctaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacaccgggacacgtctaatccgaggagtg 34910422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 7928449 - 7928503
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 10954959 - 10955005
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  10954959 ctaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 21479117 - 21479171
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  21479117 cgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcg 21479171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 41961702 - 41961656
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41961702 ctaataatttgaaaatatcacattattcggtgtaattacaagtgtcg 41961656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 55401082 - 55401128
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  55401082 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 55401128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 10268546 - 10268493
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| | ||||||||||||||||||||||||||  |||||||||||||||||    
T  10268546 cgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 34307839 - 34307782
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtc 34307782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 3164085 - 3164033
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||||||||||||| ||||||  ||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 14979180 - 14979224
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 168  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  14979180 cgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 20503474 - 20503518
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 11610522 - 11610573
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||| ||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  11610522 acaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 14832105 - 14832176
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||| |||||  ||| || ||||||||||    
T  14832105 gctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacga 14832176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 750670 - 750624
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||    
T  750670 ctaataatttgaaaatatcacataattcgctgcaattacaagtgtcg 750624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 4991027 - 4990973
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  4991027 cgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcg 4990973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 8383256 - 8383310
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  8383256 cgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 8587069 - 8587027
Alignment:
Q  136 taatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 8789610 - 8789556
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||| | ||||||    
T  8789610 cgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcg 8789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 14216899 - 14216969
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 201  Q
    |||||||||| |||| |||| ||||||| |||||||||||||||| ||||||  || ||||||||||||||    
T  14216899 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14216969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 14223028 - 14223098
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 201  Q
    |||||||||| |||| |||| ||||||| |||||||||||||||| ||||||  || ||||||||||||||    
T  14223028 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 15796354 - 15796300
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  15796354 cgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcg 15796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 24205101 - 24205043
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||||| ||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  24205101 cgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 24205043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 25775516 - 25775562
Alignment:
Q  133 taataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  25775516 taataatttgaaaataatcacataattcagtgtaattacaagtgtcg 25775562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 27505245 - 27505299
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||  |||||||||||||||  ||||||||||||||||||    
T  27505245 cgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcg 27505299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 28812522 - 28812568
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  28812522 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 28812568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 18426956 - 18426993
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18426956 ctaataatttcaaaaaatcacataattcggtgtaatta 18426993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 26492258 - 26492215
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||    
T  26492258 gctaataatttgaaaaaatcatacaattcagtgtaattacaagt 26492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 40052331 - 40052366
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattc 159  Q
    |||||| |||||||||||||||||||||||||||||    
T  40052331 cgacacagctaataatttgaaaaaatcacataattc 40052366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 8593136 - 8593190
Alignment:
Q  125 gacacggctaataatttg-aaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| |||| ||||||| ||||||||||||||||| || |||||||||||||||    
T  8593136 gacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcg 8593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 11251984 - 11252022
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  11251984 gctaataatttgagaaaatcacataattcagtgtaatta 11252022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 14747560 - 14747610
Alignment:
Q  124 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaag 173  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  14747560 cgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 14829689 - 14829742
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||| ||||||||||||   ||||||||||||||||    
T  14829689 cgacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcg 14829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 16000068 - 16000022
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||| ||||||| ||||||||| |||||| |||||||||||    
T  16000068 ctaataatttaaaaaaataacataattcagtgtaactacaagtgtcg 16000022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 17005671 - 17005625
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 29508451 - 29508497
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||| ||||||| ||||||||| | ||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 55212962 - 55213016
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  55212962 cgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcg 55213016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 11313860 - 11313815
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||||||||||  |||||||||    
T  11313860 cgacactgctaataatttgagaaaatcacataatttagtgtaatta 11313815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 12704720 - 12704659
Alignment:
Q  121 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||| |||||| ||||||||||||||||| |||||||||  |||||| | | ||||||||||    
T  12704720 acacaacacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtc 12704659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 23870619 - 23870574
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||||||||||| ||||||| |||| ||||    
T  23870619 cgacaccgctaataatttgaaaaaatcatataattcagtgtgatta 23870574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 24633773 - 24633810
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  24633773 ctaataatttgagaaaatcacataattcggtgcaatta 24633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 25064908 - 25064953
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| |||||| |||||||||||||||||||||  |||||||||    
T  25064908 cgacaccgctaatgatttgaaaaaatcacataatttagtgtaatta 25064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 25365470 - 25365519
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    ||||||||||| || || ||||||||||||||||| | ||||||||||||    
T  25365470 taataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtc 25365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 1550141 - 1550217
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||| |||||||||||||||||||||||  |||| ||||||||| | ||||| |||||  ||||||||  |||||||    
T  1550141 acaccgctaataatttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcgtgtcagtgttcgacacga 1550217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 4201404 - 4201440
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||||||||||||||||  |||||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaatta 4201440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 7171520 - 7171552
Alignment:
Q  144 aaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||||| ||||||||||||||||||||||||    
T  7171520 aaaaatcatataattcggtgtaattacaagtgt 7171552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 8930880 - 8930836
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||| |||||||||||||||||| |||||||| | ||||||    
T  8930880 aataattttaaaaaatcacataattcgatgtaattatatgtgtcg 8930836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 9624641 - 9624685
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||| |||||||||||||||  ||||||||    
T  9624641 gacactgctaataatttgagaaaatcacataattcaatgtaatta 9624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 10690321 - 10690277
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||| ||| ||||||||||||||| |||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaatta 10690277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 15544693 - 15544737
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||| ||||||||||||||| || ||||||    
T  15544693 gacaccgctaataatttgataaaatcacataattctgtataatta 15544737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 27277897 - 27277853
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaatta 27277853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 30404910 - 30404856
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  30404910 cgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 38117219 - 38117167
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  38117219 cgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 30717583 - 30717536
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30717583 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 2438778 - 2438725
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcg 2438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 21374759 - 21374706
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21374759 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 37419742 - 37419822
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatg 203  Q
    ||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| | |||||  ||| |||||||||||||||    
T  37419742 cgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatg 37419822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 20539734 - 20539680
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  20539734 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 37558976 - 37559030
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||| ||||||||||||||||  |||||||||||||||||    
T  37558976 cgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 11223922 - 11223869
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 28677908 - 28677953
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  28677908 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 39323263 - 39323316
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  39323263 cgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 19536450 - 19536403
Alignment:
Q  132 ctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  19536450 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 974754 - 974800
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  974754 ctaataatttgaaaagatcacattattcagtgtaattacaagtgtcg 974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 5473336 - 5473370
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaat 167  Q
    |||||||||||||||||||||||||||||||||||    
T  5473336 taataatttgaaaaaatcacataattcggtgtaat 5473370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 12668475 - 12668429
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 12940987 - 12940941
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  12940987 ctaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 15657871 - 15657917
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcg 15657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 18841065 - 18841019
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||    
T  18841065 ctaataatttgaaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 15972881 - 15972926
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  15972881 taataatttgaaaaaattacacaattcagtgtaattacaagtgtcg 15972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 18421971 - 18422016
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||    
T  18421971 taataatttaaaaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 21616761 - 21616806
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  21616761 cgacaccgctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 21782878 - 21782833
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  21782878 cgacactgctaataatttgagaaaatcacataattcagtgtaatta 21782833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 33153431 - 33153476
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||||    
T  33153431 ctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtc 33153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 4882749 - 4882677
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg-tgtctagtcagtgtcggacacgat 202  Q
    |||||| |||||||||||| | ||||||| |||||||||||||||||| ||||  ||| ||||| ||||||||    
T  4882749 gctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgat 4882677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 24894388 - 24894440
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||| ||||||||||||||||| ||| ||||| ||||||    
T  24894388 cgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 14996284 - 14996229
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  14996284 cgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcg 14996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 5040738 - 5040787
Alignment:
Q  131 gctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  5040738 gctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcg 5040787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 6940254 - 6940308
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||| ||||| | ||||||||  ||||||||||||||||||    
T  6940254 cgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 20473329 - 20473375
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  20473329 ctaataatttaaaaaactcatataattcagtgtaattacaagtgtcg 20473375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 23058494 - 23058448
Alignment:
Q  133 taataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||    
T  23058494 taataatttgaaaaaaatcacataatccagtgtaattacaagtgtcg 23058448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 23718025 - 23718079
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||||||| | ||||||    
T  23718025 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 24105697 - 24105751
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||||||| | ||||||    
T  24105697 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 26769518 - 26769564
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| ||||||| ||  |||||||||||||||||||    
T  26769518 ctaataatttgaaaatatcacattatctggtgtaattacaagtgtcg 26769564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 30335424 - 30335470
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||||||||  |||||||||||| |||||    
T  30335424 ctaataatttgaaaaaatgacataatttagtgtaattacaaatgtcg 30335470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 34221557 - 34221503
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||  |||||||||  || ||||||||||||||    
T  34221557 cgacacagctaataatttgaaaaaaatacataattctatgcaattacaagtgtcg 34221503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 36756396 - 36756350
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||| |||| ||||||||| ||||||||| ||||||||    
T  36756396 ctaataatttgaagaaataacataattcagtgtaattataagtgtcg 36756350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 37411304 - 37411250
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||| |||| |||| | ||||||    
T  37411304 cgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 42832336 - 42832282
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||| ||||| ||| ||||||||| ||||||||    
T  42832336 cgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcg 42832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 10535819 - 10535762
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgt 181  Q
    |||||| | ||||||||||| ||||| ||||||||| ||||||| | |||||||||||    
T  10535819 cgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt 10535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 18276520 - 18276565
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| |||||||| |||||| |||||||||    
T  18276520 cgacaccgctaataatttgagaaaatcacttaattcagtgtaatta 18276565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 21091722 - 21091775
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  21091722 cgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 31808076 - 31808121
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||| | ||||||||||||||| |||||||||    
T  31808076 cgacaccgctaataatttaacaaaatcacataattcagtgtaatta 31808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 36409687 - 36409642
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||| ||||||||||||||||||||||||  |||||||||    
T  36409687 cgacaccgctgataatttgaaaaaatcacataatttagtgtaatta 36409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 44860320 - 44860373
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||| |||||| |||||||| ||||||||| | ||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 18420492 - 18420440
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| |||||||||||||||  || ||||| ||||||||    
T  18420492 acactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcg 18420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 28412358 - 28412394
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  28412358 taataatttgataaaatcacataattcagtgtaatta 28412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 20171 - 20224
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20171 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 21465412 - 21465489
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtg-tcgtgtctagtcagtgtcggacacga 201  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||||| | |||||  |||||||||||||||||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacga 21465489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 25566841 - 25566894
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 25566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 17468558 - 17468459
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaattacaa------gtgtcgtgtctagtcagtgtcggacacga-tgggacacgcctaatccgaggagtg 226  Q
    ||||||||| |||||||||||||| ||||||||||||||      ||||||||||  ||| |||||||||||||  ||||||||||||||||||||||||    
T  17468558 aataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgtcgtgtcggtgtcggacacgagggggacacgcctaatccgaggagtg 17468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 2572108 - 2572038
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||  ||| |||||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacga 2572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 4948659 - 4948705
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 4948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 22651975 - 22652053
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||| |||||||||||||||||||||||||||||  | |||||||||||||| |||||  ||| |||||||||||||    
T  22651975 cgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacga 22652053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 41832000 - 41831943
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgt 181  Q
    |||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  41832000 cgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 8342978 - 8343025
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8342978 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 8343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 8343322 - 8343368
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  8343322 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 18407718 - 18407772
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  18407718 cgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 29510364 - 29510310
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||| ||||| || |||||||||||||||    
T  29510364 cgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 30077440 - 30077394
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  30077440 gctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 20873077 - 20873122
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 40332191 - 40332244
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 13437024 - 13436924
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgagg 222  Q
    |||||| |||||||||||||||||||||||||||||   ||||| ||||||||| |||||  ||| ||||| |||||   |||||||||||||||| |||    
T  13437024 cgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtc-gacac--cgggacacgcctaatccaagg 13436928  T
Q  223 agtg 226  Q
    ||||    
T  13436927 agtg 13436924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 22595993 - 22596045
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  22595993 cgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 36450806 - 36450762
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  36450806 ctaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 22197800 - 22197749
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||||    
T  22197800 acacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 30271351 - 30271300
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtg 175  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||||||||    
T  30271351 cgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 4298946 - 4298892
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||||||||||||||||||   |||||||||||||||||    
T  4298946 cgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcg 4298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 15816181 - 15816135
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 24613520 - 24613573
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  24613520 cgacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcg 24613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 28745497 - 28745575
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg-tgtctagtcagtgtcggacacga 201  Q
    |||||| ||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||||  ||| |||||||||||||    
T  28745497 cgacactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacga 28745575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 29447162 - 29447092
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||||||||| |||||||||||||||  ||||| |||||||||| |||||  ||| |||||||||||||    
T  29447162 ctaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacga 29447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 34897084 - 34897138
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 41838183 - 41838125
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||| ||||||||||||||||| ||| || ||||||||| |||||    
T  41838183 cgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtc 41838125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 44067515 - 44067573
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||||| ||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  44067515 cgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 44067573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 3025557 - 3025595
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaatta 3025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 4673485 - 4673435
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    |||||| | ||||||||||||||||||| | ||||| ||||||||||||||    
T  4673485 cgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagt 4673435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 5813591 - 5813645
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||| ||||||| ||  |||||| |||||||||||    
T  5813591 cgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcg 5813645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 7442846 - 7442896
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||| ||||||||||| | ||||| ||||||||| ||||||||||||||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaattacaagtgt 7442896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 11927146 - 11927092
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  11927146 cgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 13844656 - 13844602
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||| | ||||||    
T  13844656 cgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 20679447 - 20679401
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 25192407 - 25192353
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||| | ||||||||| || |||||| ||||||||    
T  25192407 cgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 158
Target Start/End: Original strand, 27101514 - 27101548
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataatt 158  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101514 cgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 31236637 - 31236583
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| |||||||||||||||  |||||||| | ||||||    
T  31236637 cgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 31556996 - 31557045
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    |||||| | |||||||||||||| |||||||||||| ||||||||||||||    
T  31556996 cgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagt 31557045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 4611533 - 4611578
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  4611533 cgacaccgctaataatttgagaaaataacataattcagtgtaatta 4611578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 12606892 - 12606835
Alignment:
Q  121 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||| ||||||||||||| ||||||| |||||||  |||||||| | ||||||    
T  12606892 acacgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcg 12606835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 14134706 - 14134743
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaatta 14134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 24362262 - 24362217
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| | ||||||||||||| |||||||||    
T  24362262 cgacaccgctaataatttgagagaatcacataattcagtgtaatta 24362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 24669441 - 24669486
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||  |||| ||||||||| ||||||||||||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaattacaagtgtcg 24669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 28642408 - 28642457
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    ||||||| ||||||||||||||| | ||||||||| |||||| |||||||    
T  28642408 gacacggttaataatttgaaaaatttacataattcagtgtaactacaagt 28642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 36934669 - 36934714
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||||    
T  36934669 cgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 39954339 - 39954294
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||| ||||||||||||||  |||||||||    
T  39954339 cgacaccgctaataatttgagaaaatcacataatttagtgtaatta 39954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 14731712 - 14731756
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaatta 14731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 35519865 - 35519833
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataatt 158  Q
    |||| ||||||||||||||||||||||||||||    
T  35519865 acacagctaataatttgaaaaaatcacataatt 35519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 51810 - 51862
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  51810 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 113298 - 113350
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  113298 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 35702648 - 35702556
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtctagtcagtgtcggacacgatgggacacgcctaatccgagga 223  Q
    |||||| ||||||||||||||||  ||| ||||||  |||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  35702648 cgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtc----------agtgtcggacacgatgggacacgcctaatccgagga 35702559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 24577238 - 24577192
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  24577238 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 38078721 - 38078667
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  38078721 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 1486768 - 1486715
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 22515946 - 22515893
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 40258984 - 40258939
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 40258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 47989505 - 47989574
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 47989574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 18337338 - 18337382
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 18337382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 1705044 - 1704998
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcg 1704998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 6612222 - 6612152
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgat 202  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||  |||  |||||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgat 6612152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 18190160 - 18190114
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 21378577 - 21378631
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  21378577 cgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 22881668 - 22881622
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  22881668 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 31672955 - 31672905
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  31672955 cgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 42359501 - 42359455
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 46348443 - 46348389
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  46348443 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 398825 - 398780
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  398825 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 48450645 - 48450593
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  48450645 acacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 51410031 - 51410078
Alignment:
Q  132 ctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  51410031 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 51410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 3490450 - 3490392
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||||| ||||  |||| |||| ||||||||||||||||||||||    
T  3490450 cgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcgtgtc 3490392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 10572641 - 10572595
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||    
T  10572641 ctaataatttgagaaaatcacataattcggtgtaattaaatgtgtcg 10572595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 19058916 - 19058862
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||| |||| || ||||||||| ||||||||||||||||||    
T  19058916 cgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcg 19058862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 28273140 - 28273094
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  28273140 ctaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcg 28273094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 36878460 - 36878514
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  36878460 cgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 41877530 - 41877476
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  41877530 cgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcg 41877476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 1815265 - 1815310
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||    
T  1815265 taattattttaaaaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 5898326 - 5898281
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||    
T  5898326 cgacaccgctaataatctgaaaaaatcacataattcagtgtaatta 5898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 13011276 - 13011223
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 176  Q
    |||||| |||||||||||||||||| ||||||||||  ||||||||||||||||    
T  13011276 cgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 14359581 - 14359529
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||||||| ||||||||||  |||||||||||||||||    
T  14359581 cgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 18471297 - 18471353
Alignment:
Q  124 cgacacggctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||  ||||||||||||| || |||||||||||||||    
T  18471297 cgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcg 18471353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 23738677 - 23738722
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||    
T  23738677 cgacacagctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 32434768 - 32434723
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||    
T  32434768 ctaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 9709821 - 9709873
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| |||||||||||||||| |||||||| | ||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcg 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 12443520 - 12443476
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 168  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  12443520 cgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 22794136 - 22794080
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||| | ||||||||||    
T  22794136 acacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc 22794080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 31694765 - 31694694
Alignment:
Q  131 gctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 199  Q
    ||||||||||||||||||  ||||||||||| || |||||||||||||| |||||  ||| |||||||||||    
T  31694765 gctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 32461515 - 32461471
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 40181871 - 40181915
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaatta 40181915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 5927398 - 5927347
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||| ||||||||||||||||||||| ||||||   ||||||||||||||||    
T  5927398 acactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 17778549 - 17778599
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| |||||||||||||||||||||||||   | ||||||||||||||||||    
T  17778549 gacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcg 17778599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 25361896 - 25361963
Alignment:
Q  135 ataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| |||||  ||| |||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacga 25361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 44482240 - 44482307
Alignment:
Q  135 ataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| |||||  ||| |||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 44482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 1864940 - 1864886
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  1864940 cgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 5376560 - 5376506
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||| | ||||| ||||||||| ||||||||| ||||||||    
T  5376560 cgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcg 5376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 5944287 - 5944336
Alignment:
Q  131 gctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  5944287 gctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 6332678 - 6332719
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  6332678 ctaataatttgaaaa-atcacataattcagtgtaattacaagt 6332719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 9629960 - 9629906
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||| ||||||| |||| |||| ||||||||    
T  9629960 cgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcg 9629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 16927238 - 16927200
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaatta 16927200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 17754310 - 17754352
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaa 166  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||    
T  17754310 cgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 18556516 - 18556466
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 174  Q
    |||||| |||||||||||||||| |||||||||||   |||||||||||||    
T  18556516 cgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 37598839 - 37598884
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  37598839 ctaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcg 37598884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 2896181 - 2896140
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgta 165  Q
    |||||| ||||||||||||| ||||||||||||||| |||||    
T  2896181 cgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 7918263 - 7918226
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaatta 7918226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 11605988 - 11605943
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  11605988 gctaataatttgaaaaaatcatataattcagtgaaattacatgtgt 11605943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 19324561 - 19324606
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||    
T  19324561 cgacactgctgataatttgagaaaatcacataattcagtgtaatta 19324606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 25098615 - 25098570
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||    
T  25098615 cgacaccgctgataatttgagaaaatcacataattcagtgtaatta 25098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 27471619 - 27471574
Alignment:
Q  131 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  27471619 gctaataatttgagaaaagcacataattcagtgtaattacatgtgt 27471574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 29144418 - 29144365
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||||||||  | ||||| | |||||||||||||||||    
T  29144418 cgacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 34298443 - 34298480
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatta 169  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  34298443 ctaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 9828051 - 9828087
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaatt 168  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 15323171 - 15323215
Alignment:
Q  133 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 16297343 - 16297295
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaa 172  Q
    |||||| || |||||| ||||||||||||| ||||| ||||||||||||    
T  16297343 cgacacagcaaataatatgaaaaaatcacaaaattcagtgtaattacaa 16297295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 17831591 - 17831518
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtctagtcagtgtcggacac 199  Q
    |||||| ||||||||||||| |||||||||| |||| ||||||| | | |||||  |||  |||||||||||||||    
T  17831591 cgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc--gtcgtgtcagtgtcggacac 17831518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 522 - 468
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  522 cgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 3909 - 3831
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||  ||  |||||||||||||    
T  3909 cgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacga 3831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 14537 - 14580
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtg 175  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 33423 - 33366
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 182  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  33423 cgacacagctaataatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtc 33366  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 46681 - 46735
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||| |||||    
T  46681 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 130481 - 130535
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  130481 cgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 17801 - 17755
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  17801 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 17755  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 192309 - 192256
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| | ||||||||||| ||||| |||||||||||||||||||||||||||    
T  192309 cgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

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Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 178871 - 178825
Alignment:
Q  132 ctaataatttgaaaaaatca-cataattcggtgtaattacaagtgtc 177  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  178871 ctaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 92806 - 92859
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 177  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  92806 cgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 123626 - 123681
Alignment:
Q  126 acacggctaataatttgaaaaaa---tcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||| ||||||   ||||||||||| ||||||||||||||||||    
T  123626 acacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcg 123681  T

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Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 8687 - 8616
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgat 202  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||| |||||  ||| || |||||||||||    
T  8687 ctaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgat 8616  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 8797 - 8851
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||||||||||| || |||  ||||||||||||||||||    
T  8797 cgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcg 8851  T

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Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 70277 - 70331
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| | ||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 23777 - 23823
Alignment:
Q  133 taataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23777 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 23823  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 135372 - 135318
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  135372 cgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

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Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 4944 - 4891
Alignment:
Q  124 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  4944 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0722 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 7092 - 7040
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    |||||| ||||||||||||||||||| ||||||||  || |||||||||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

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Target: scaffold0246 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 19583 - 19626
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  19583 ctaataatttgaaaa-atcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 63774 - 63826
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||| ||||||||||||| ||||| ||||||||| ||| ||||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcg 63826  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  134 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 263430 - 263354
Alignment:
Q  126 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 201  Q
    |||| ||||||||||||| |||| |||||||||| ||||||||| ||||||| |||||  ||| ||||| |||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacga 263354  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 71722 - 71800
Alignment:
Q  124 cgacacggctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 199  Q
    |||||| ||||||||||||||||  ||||||| ||||| |||||||||| |||||| |||||  ||| |||||||||||    
T  71722 cgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacac 71800  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 1034 - 1076
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaa 166  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||    
T  1034 cgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 13407 - 13453
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  13407 ctaataatttgagaaaatcacataattcagtgcaattacaagggtcg 13453  T

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Target: scaffold0152 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 21920 - 21874
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  21920 ctaataatttgagaaaatcacataattcagtgcaattacaagggtcg 21874  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 241593 - 241647
Alignment:
Q  124 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    |||||| |||||||||||| |||||||||||||||  |||||||||  |||||||    
T  241593 cgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcg 241647  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 25827 - 25774
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||| |||||||| || ||||||||||||||  ||||||||| ||||||||    
T  25827 gacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcg 25774  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 21043 - 21096
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||||| ||||||||||| |||||||||||| ||||| |||||| | ||||||    
T  21043 gacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcg 21096  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 44584 - 44531
Alignment:
Q  125 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 178  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||| | ||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 7363 - 7319
Alignment:
Q  132 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 176  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||||    
T  7363 ctaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 23529 - 23589
Alignment:
Q  143 aaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgat 202  Q
    ||||||||||||||||| ||||||||| ||||||| |||||   || ||||||||||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgat 23589  T

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