View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8606A_low_64 (Length: 355)

Name: NF8606A_low_64
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8606A_low_64
NF8606A_low_64
[»] chr6 (26 HSPs)
chr6 (182-352)||(15576518-15576688)
chr6 (3-180)||(25991852-25992029)
chr6 (3-183)||(5994698-5994879)
chr6 (3-182)||(23925335-23925514)
chr6 (3-183)||(33298084-33298263)
chr6 (45-182)||(25550295-25550432)
chr6 (40-182)||(13825703-13825845)
chr6 (45-182)||(5004061-5004198)
chr6 (45-182)||(30824457-30824594)
chr6 (45-182)||(25506469-25506606)
chr6 (51-182)||(35091610-35091741)
chr6 (45-182)||(11279837-11279974)
chr6 (53-183)||(15391547-15391677)
chr6 (78-184)||(13490191-13490297)
chr6 (186-320)||(15574462-15574599)
chr6 (130-182)||(5489132-5489184)
chr6 (248-352)||(16526916-16527021)
chr6 (279-350)||(12972811-12972883)
chr6 (121-183)||(11053701-11053764)
chr6 (55-123)||(26526640-26526708)
chr6 (121-182)||(30114444-30114505)
chr6 (3-76)||(5489051-5489124)
chr6 (186-240)||(17860886-17860940)
chr6 (59-112)||(15140726-15140779)
chr6 (59-112)||(23985047-23985100)
chr6 (59-112)||(28127457-28127510)
[»] chr4 (17 HSPs)
chr4 (3-183)||(12996475-12996655)
chr4 (3-184)||(52295602-52295784)
chr4 (3-182)||(27343577-27343756)
chr4 (45-183)||(8094210-8094348)
chr4 (45-182)||(8103016-8103153)
chr4 (45-182)||(4523608-4523745)
chr4 (3-182)||(21532190-21532369)
chr4 (57-182)||(12428418-12428543)
chr4 (109-182)||(10638328-10638400)
chr4 (88-183)||(33188765-33188859)
chr4 (57-182)||(3424331-3424454)
chr4 (3-84)||(10638404-10638485)
chr4 (78-127)||(12402907-12402956)
chr4 (254-320)||(15787861-15787927)
chr4 (59-131)||(19772241-19772313)
chr4 (59-112)||(19647352-19647405)
chr4 (3-63)||(10814333-10814393)
[»] scaffold0156 (1 HSPs)
scaffold0156 (3-182)||(35242-35421)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-183)||(23463-23644)
[»] chr7 (17 HSPs)
chr7 (3-183)||(10439936-10440116)
chr7 (51-182)||(18304326-18304457)
chr7 (45-182)||(12978455-12978592)
chr7 (45-183)||(4952325-4952463)
chr7 (45-183)||(13831499-13831637)
chr7 (45-183)||(13839530-13839668)
chr7 (86-182)||(30244775-30244871)
chr7 (121-183)||(4941581-4941643)
chr7 (247-352)||(21471380-21471486)
chr7 (57-183)||(21662962-21663089)
chr7 (78-182)||(30245568-30245672)
chr7 (78-174)||(30255420-30255516)
chr7 (186-338)||(5721920-5722077)
chr7 (56-111)||(1955691-1955746)
chr7 (267-345)||(7955796-7955875)
chr7 (59-112)||(20114066-20114119)
chr7 (59-112)||(38247996-38248049)
[»] chr8 (20 HSPs)
chr8 (40-182)||(17973565-17973707)
chr8 (45-183)||(39837490-39837628)
chr8 (45-182)||(25579740-25579877)
chr8 (45-182)||(30938282-30938419)
chr8 (4-183)||(26873490-26873670)
chr8 (4-182)||(26875940-26876119)
chr8 (53-182)||(39845541-39845670)
chr8 (45-183)||(17664568-17664706)
chr8 (45-182)||(1407001-1407138)
chr8 (50-182)||(4839715-4839847)
chr8 (45-182)||(17683724-17683861)
chr8 (267-348)||(16052707-16052789)
chr8 (80-183)||(4582203-4582306)
chr8 (121-183)||(6670710-6670772)
chr8 (257-351)||(22894959-22895054)
chr8 (125-182)||(6663042-6663099)
chr8 (125-182)||(6743444-6743501)
chr8 (247-348)||(28901768-28901869)
chr8 (56-112)||(23090611-23090667)
chr8 (56-112)||(25700273-25700329)
[»] chr3 (30 HSPs)
chr3 (3-182)||(50824352-50824535)
chr3 (3-182)||(50851325-50851508)
chr3 (7-183)||(14538494-14538671)
chr3 (3-183)||(27341220-27341401)
chr3 (3-182)||(2211239-2211418)
chr3 (45-183)||(8154572-8154710)
chr3 (45-183)||(41006555-41006693)
chr3 (45-183)||(41015335-41015473)
chr3 (40-183)||(9525357-9525500)
chr3 (40-182)||(9555031-9555173)
chr3 (3-182)||(28470103-28470282)
chr3 (57-183)||(17933654-17933780)
chr3 (56-180)||(43470492-43470615)
chr3 (57-183)||(17919198-17919324)
chr3 (118-182)||(17628265-17628329)
chr3 (57-183)||(16816145-16816269)
chr3 (56-182)||(21186747-21186872)
chr3 (80-178)||(18349560-18349658)
chr3 (80-183)||(8197659-8197762)
chr3 (257-349)||(11520733-11520826)
chr3 (86-182)||(30445-30541)
chr3 (88-182)||(18039011-18039105)
chr3 (59-112)||(13272670-13272723)
chr3 (59-112)||(4505979-4506032)
chr3 (56-97)||(16288692-16288733)
chr3 (59-112)||(17657630-17657683)
chr3 (59-112)||(27976552-27976605)
chr3 (57-113)||(1477758-1477814)
chr3 (155-183)||(6958978-6959006)
chr3 (59-103)||(17618130-17618174)
[»] scaffold0002 (1 HSPs)
scaffold0002 (45-182)||(121228-121365)
[»] scaffold0497 (1 HSPs)
scaffold0497 (3-182)||(10993-11171)
[»] chr5 (33 HSPs)
chr5 (3-182)||(29186164-29186343)
chr5 (3-183)||(20372799-20372979)
chr5 (3-182)||(20398521-20398700)
chr5 (9-183)||(23349968-23350142)
chr5 (45-183)||(24956774-24956912)
chr5 (45-183)||(24965237-24965375)
chr5 (45-182)||(43597974-43598111)
chr5 (45-182)||(43603466-43603603)
chr5 (45-182)||(43608958-43609095)
chr5 (45-185)||(1728087-1728227)
chr5 (3-182)||(31410890-31411069)
chr5 (45-183)||(28852549-28852687)
chr5 (45-182)||(28843940-28844077)
chr5 (55-182)||(31421789-31421916)
chr5 (71-182)||(19223555-19223666)
chr5 (267-352)||(24841367-24841453)
chr5 (186-352)||(17027056-17027225)
chr5 (86-179)||(41099745-41099838)
chr5 (257-348)||(11274779-11274871)
chr5 (265-348)||(22754557-22754641)
chr5 (57-103)||(23028007-23028053)
chr5 (58-104)||(23037923-23037969)
chr5 (254-340)||(19331160-19331247)
chr5 (133-182)||(21929236-21929285)
chr5 (59-112)||(21988620-21988673)
chr5 (59-112)||(21997264-21997317)
chr5 (59-112)||(23606368-23606421)
chr5 (59-112)||(23635076-23635129)
chr5 (59-112)||(23829022-23829075)
chr5 (59-112)||(23837763-23837816)
chr5 (59-112)||(31550458-31550511)
chr5 (56-112)||(21852579-21852635)
chr5 (56-112)||(21869103-21869159)
[»] scaffold0632 (1 HSPs)
scaffold0632 (3-182)||(4390-4570)
[»] scaffold0111 (1 HSPs)
scaffold0111 (9-182)||(33035-33208)
[»] scaffold0173 (1 HSPs)
scaffold0173 (3-183)||(815-995)
[»] chr2 (30 HSPs)
chr2 (3-154)||(35037884-35038035)
chr2 (45-183)||(15944485-15944623)
chr2 (45-183)||(35138592-35138730)
chr2 (45-183)||(35146928-35147066)
chr2 (45-183)||(41233772-41233910)
chr2 (45-182)||(14582925-14583062)
chr2 (45-182)||(15953000-15953137)
chr2 (45-182)||(38168285-38168422)
chr2 (45-183)||(20621517-20621655)
chr2 (45-183)||(42565857-42565995)
chr2 (45-182)||(42574481-42574618)
chr2 (80-182)||(17687361-17687463)
chr2 (54-182)||(20372251-20372378)
chr2 (71-182)||(25483601-25483712)
chr2 (71-182)||(25491207-25491318)
chr2 (87-182)||(44372705-44372800)
chr2 (87-182)||(44388616-44388711)
chr2 (57-182)||(35303737-35303862)
chr2 (78-182)||(27606606-27606709)
chr2 (80-182)||(24285696-24285798)
chr2 (80-182)||(42249418-42249520)
chr2 (80-180)||(26903296-26903396)
chr2 (80-182)||(34070567-34070669)
chr2 (80-183)||(24292371-24292475)
chr2 (265-351)||(22389179-22389265)
chr2 (56-133)||(18989312-18989389)
chr2 (292-350)||(39730119-39730178)
chr2 (121-182)||(21322814-21322875)
chr2 (132-182)||(20917520-20917570)
chr2 (59-112)||(27683381-27683434)
[»] scaffold0083 (1 HSPs)
scaffold0083 (54-182)||(15813-15941)
[»] chr1 (20 HSPs)
chr1 (3-182)||(32137640-32137819)
chr1 (45-183)||(3432818-3432956)
chr1 (45-183)||(31548522-31548660)
chr1 (45-182)||(31539954-31540091)
chr1 (11-182)||(41746586-41746758)
chr1 (45-182)||(35103992-35104129)
chr1 (57-183)||(29221429-29221554)
chr1 (257-345)||(23223131-23223220)
chr1 (57-182)||(44320132-44320257)
chr1 (80-182)||(21498861-21498963)
chr1 (88-180)||(51058359-51058450)
chr1 (65-180)||(28457556-28457673)
chr1 (57-106)||(8241438-8241487)
chr1 (3-63)||(13450142-13450202)
chr1 (59-131)||(8579341-8579413)
chr1 (148-182)||(20314058-20314092)
chr1 (59-112)||(12465698-12465751)
chr1 (266-342)||(31313020-31313097)
chr1 (121-182)||(52100017-52100078)
chr1 (294-349)||(14397286-14397342)
[»] scaffold0209 (1 HSPs)
scaffold0209 (45-182)||(12-149)
[»] scaffold0039 (1 HSPs)
scaffold0039 (91-182)||(40807-40898)
[»] scaffold0170 (1 HSPs)
scaffold0170 (56-182)||(7129-7255)
[»] scaffold0431 (1 HSPs)
scaffold0431 (57-182)||(139-264)
[»] scaffold0222 (1 HSPs)
scaffold0222 (57-182)||(20422-20547)
[»] scaffold0863 (1 HSPs)
scaffold0863 (80-183)||(335-438)
[»] scaffold0991 (1 HSPs)
scaffold0991 (89-182)||(345-438)
[»] scaffold0048 (2 HSPs)
scaffold0048 (110-182)||(7622-7694)
scaffold0048 (9-83)||(7547-7621)
[»] scaffold0015 (1 HSPs)
scaffold0015 (88-184)||(192526-192622)
[»] scaffold0044 (2 HSPs)
scaffold0044 (80-183)||(65501-65604)
scaffold0044 (80-183)||(81749-81852)
[»] scaffold0389 (1 HSPs)
scaffold0389 (80-183)||(415-518)
[»] scaffold0290 (1 HSPs)
scaffold0290 (56-133)||(15760-15837)
[»] scaffold1487 (1 HSPs)
scaffold1487 (136-175)||(762-801)
[»] scaffold0514 (1 HSPs)
scaffold0514 (121-183)||(10912-10974)
[»] scaffold0027 (2 HSPs)
scaffold0027 (3-114)||(65589-65701)
scaffold0027 (149-183)||(65710-65744)
[»] scaffold0315 (1 HSPs)
scaffold0315 (56-112)||(10595-10651)
[»] scaffold0484 (1 HSPs)
scaffold0484 (133-182)||(11457-11507)
[»] scaffold0455 (1 HSPs)
scaffold0455 (59-112)||(6056-6109)
[»] scaffold0047 (1 HSPs)
scaffold0047 (59-112)||(59736-59789)
[»] scaffold0007 (1 HSPs)
scaffold0007 (56-182)||(61288-61418)
[»] scaffold0990 (1 HSPs)
scaffold0990 (247-299)||(3075-3127)
[»] scaffold0323 (1 HSPs)
scaffold0323 (3-59)||(17613-17669)


Alignment Details
Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 182 - 352
Target Start/End: Complemental strand, 15576688 - 15576518
Alignment:
Q  182 agcatactttctcaaatataccccaccttaacctcaaccacgtggtaaccttgaaaatgccttcggtgtgtatggtgatatagaccttgaatgtctattt 281  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  15576688 agcatactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgcctccagtgtgtatggtgatatagaccttgaatgtctattt 15576589  T
Q  282 agaattgctccaatctcatagtaaggtacaatcacatgatgactgagtgtgacaaatgccttgaccagccc 352  Q
     |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15576588 cgaattgcttcaatctcatagtaaggtacaatcacatgatggctgagtgtgacaaatgccttgaccagccc 15576518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 25992029 - 25991852
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||| ||||||||| || |||| ||||| ||| || | || |||| |||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  25992029 aaataatgaaataaagagtaaataaagagagaagagggtccgactctgaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcttctgaa 25991930  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatga 180  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25991929 acgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaacatttggggtatga 25991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 5994879 - 5994698
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaat-aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    ||||||| ||||||||||||||  ||||||||| || |||| |||| |||| |||||||||| |||||||||||| ||||| | || |||||| ||||||    
T  5994879 aaatactaaaataaaaagaaaacaaagagggaagagggcccgactcggaatcaaaaaatgaggtacttcaaagtaacctctttgccaaaattttgtctga 5994780  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5994779 aacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 5994698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 23925514 - 23925335
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaat-aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    |||||| |||||||||| ||||  ||||||||| || |||  |||| |||| |||||||||| |||||||||||| | |||||||||||||||||||  |    
T  23925514 aaataccgaaataaaaa-aaaacaaagagggaagagggcctgactcggaatcaaaaaatgaggtacttcaaagtaacatctctaccgaaatttcgtcaaa 23925416  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23925415 aatgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 23925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 33298263 - 33298084
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||| ||||| ||||| ||| || | || |||| |||||||||||||| |||||||||||| | ||| |  ||||||||||||||||    
T  33298263 aaatactgaaataaaaataaaataaagagagaaaagggtcctactcggaataaaaaatgaggtacttcaaagtaac-tctttgtcgaaatttcgtctgaa 33298165  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  33298164 acgacgaaaattcccgactttaaaaatacgaataaaatgggtaaggatagagaaaagtggtcaaaagttggggtatgacag 33298084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 25550432 - 25550295
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||||| || ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  25550432 actcggaataaaaaatgaggtacttcaaagtaacctctctgccaaaatttcgtttgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggt 25550333  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25550332 aagaatagagaaaagtggtcaaaatttggggtatgaca 25550295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 13825845 - 13825703
Alignment:
Q  40 gcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaa 139  Q
    |||| |||| |||| ||||||||| |||||||||||| |||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  13825845 gcccgactcggaatcaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcctgactttaaaaatacgaataaaa 13825746  T
Q  140 tgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  13825745 tgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 13825703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 5004198 - 5004061
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5004198 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 5004099  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5004098 aagaatagagaaaagtggtcaaaatttggggtatgaca 5004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 30824457 - 30824594
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  30824457 actcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggt 30824556  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30824557 aagaatagagaaaagtggtcaaaatttggggtatgaca 30824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 25506469 - 25506606
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| || || |||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  25506469 actcggaatcaaaaatgaggtattttaaagtaacctctctgccgaaatttcgtctaaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 25506568  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  25506569 aagaatagagaaaagtgatcaaaatttggggtatgaca 25506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 35091610 - 35091741
Alignment:
Q  51 aataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaat 150  Q
    ||||||||||||| |||||||||||| ||||  | || |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  35091610 aataaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatatgaataaaatgggtaagaat 35091709  T
Q  151 agagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||    
T  35091710 agagaaaagtggtcaaaatttggggtatgaca 35091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 11279974 - 11279837
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  11279974 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaataaaatgggt 11279875  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11279874 aagaatagaggaaagtggtcaaaatttggggtatgaca 11279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 15391547 - 15391677
Alignment:
Q  53 taaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 152  Q
    ||||||||||| |||||||||||| ||||| |  |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| ||| ||||    
T  15391547 taaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcctggctttaaaaatacgaataaaatgggcaaggatag 15391646  T
Q  153 agaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||| ||||||||    
T  15391647 agaaaagtggtcaaaatttgggatatgacag 15391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 13490297 - 13490191
Alignment:
Q  78 cctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggta 177  Q
    ||||||| |||| |||| ||||||||  | |||||||||||  |||| | ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13490297 cctctctgccgagattttgtctgaaataacgaaaattcccggttttacagatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggta 13490198  T
Q  178 tgacagc 184  Q
    |||||||    
T  13490197 tgacagc 13490191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 320
Target Start/End: Original strand, 15574462 - 15574599
Alignment:
Q  186 tactttctcaaatataccccaccttaacctcaaccacgtggtaaccttgaaaatgcct---tcggtgtgtatggtgatatagaccttgaatgtctattta 282  Q
    ||||||| |||||||| ||||||||||||||| ||||||  ||||||||||||  |||   |  ||||||||  ||||||| ||||||||||||||| ||    
T  15574462 tactttcccaaatatatcccaccttaacctcagccacgttataaccttgaaaagtcctctatatgtgtgtataatgatataaaccttgaatgtctatgta 15574561  T
Q  283 gaattgctccaatctcatagtaaggtacaatcacatga 320  Q
     ||||||| ||||||||||| ||| |||||||||||||    
T  15574562 taattgcttcaatctcatagcaagatacaatcacatga 15574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 5489132 - 5489184
Alignment:
Q  130 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489132 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 5489184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 16526916 - 16527021
Alignment:
Q  248 tgtgtatggtgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgac 346  Q
    ||||| || ||||||| ||||||||||||| ||||||||||||  ||| | |||| ||||||||||||||||| |||| |||||||| | ||| ||||||    
T  16526916 tgtgtgtgatgatatataccttgaatgtctgtttagaattgctttaatgttatagaaaggtacaatcacatgacgactggagtgtgaaatatgtcttgac 16527015  T
Q  347 cagccc 352  Q
    ||||||    
T  16527016 cagccc 16527021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 350
Target Start/End: Complemental strand, 12972883 - 12972811
Alignment:
Q  279 tttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagc 350  Q
    |||||||||| | ||||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||    
T  12972883 tttagaattgattcaatctcatagcaaggtacaatcacatgatgattggagtgtggcaaatgccttgaccagc 12972811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 11053764 - 11053701
Alignment:
Q  121 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  11053764 tttaaaaatacgaataaaatttggtaaaaatagaaaaaagtggtcaaaatttggggtatgacag 11053701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 26526640 - 26526708
Alignment:
Q  55 aaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgacttt 123  Q
    ||||||||| || ||||||||| || |||| |||| |||||||||||||||| ||||||||||||||||    
T  26526640 aaaaatgaggtaattcaaagtaaccactctgccgatatttcgtctgaaacgacgaaaattcccgacttt 26526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 30114505 - 30114444
Alignment:
Q  121 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  30114505 tttaaaaatacgaataaaatttggtaaaaataga-aaaagtggtcaaaatttggggtatgaca 30114444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 5489051 - 5489124
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagta 76  Q
    ||||||||||||||||||||||| |||||||||||| | || |||  |||| ||||||||  ||||||||||||    
T  5489051 aaatactgaaataaaaagaaaataaagagggaacagggtccgacttggaatcaaaaatgaagtacttcaaagta 5489124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 17860940 - 17860886
Alignment:
Q  186 tactttctcaaatataccccaccttaacctcaaccacgtggtaaccttgaaaatg 240  Q
    |||||| ||||||||| |||||||||||||||  |||||  ||||||||||||||    
T  17860940 tactttttcaaatatatcccaccttaacctcagtcacgttataaccttgaaaatg 17860886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 15140779 - 15140726
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  15140779 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 15140726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 23985047 - 23985100
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  23985047 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 23985100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 28127457 - 28127510
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  28127457 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 28127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 12996655 - 12996475
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||  ||||| ||| || | |  |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  12996655 aaatactgaaataaaaagaaaacaaagagagaagagggactgactcggaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtctgaa 12996556  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12996555 acgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 12996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 52295784 - 52295602
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaat-aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    ||||||||||||||||||||||| ||||| ||| || |||| |||| |||| |||||||||| ||||||||||||  |||||| ||||||||| ||||||    
T  52295784 aaatactgaaataaaaagaaaataaagagagaagagggcccgactcggaatcaaaaaatgaggtacttcaaagtaatctctctgccgaaattttgtctga 52295685  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 184  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52295684 aacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 52295602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 27343577 - 27343756
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||| ||||| ||| || | || |||| |||||||||||||| |||||||||||| |||||||   |||||||||||||||    
T  27343577 aaatactgaaataaaaagaaaataaagagagaagagggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgttgaaatttcgtctgaa 27343676  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27343677 acgacgaaaattcccgactttaaaaatacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 27343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 8094210 - 8094348
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  8094210 actcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggt 8094309  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8094310 aagaatagagaaaagtggtcaaaatttggggtatgacag 8094348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 8103016 - 8103153
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  8103016 actcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggt 8103115  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8103116 aagaatagagaaaagtggtcaaaatttggggtatgaca 8103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 4523608 - 4523745
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  4523608 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatggat 4523707  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4523708 aagaatagaggaaagtggtcaaaatttggggtatgaca 4523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 21532190 - 21532369
Alignment:
Q  3 aaatactgaaataaaaag-aaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    |||||| ||||||||||  ||||| ||||| ||| || | || |||| |||||||||||||| ||||||||||||  || | |  |||||||||||||||    
T  21532190 aaataccgaaataaaaaataaaataaagagagaaaagggtccgactcagaataaaaaatgaggtacttcaaagtaatcttt-tgtcgaaatttcgtctga 21532288  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  21532289 aacgacgaaaatttccgactttaaaaatacgaataaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 21532369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 12428418 - 12428543
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| ||||||||||||  ||||    |||||||||||||||||  | ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  12428418 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 12428517  T
Q  157 aagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||    
T  12428518 aagtggtcaaaatttggggtatgaca 12428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 10638400 - 10638328
Alignment:
Q  109 aaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10638400 aaaattcccgactttaaaa-tacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 10638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 33188859 - 33188765
Alignment:
Q  88 gaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||||||||||||||||| |||||||| |  |||||||||||| ||||||| || ||| |||||| |||||| ||||||||||||||||||||||    
T  33188859 gaaatttcgtctgaaacgacgaaaattctcagctttaaaaatacaaataaaaaggataaaaataga-aaaagttgtcaaaatttggggtatgacag 33188765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 3424454 - 3424331
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| |||||||||||| |||||   ||||||||||||||| ||||| |||  |||  | |||| ||| || |||||||| |||||| | |||||||    
T  3424454 aaatgaggtacttcaaagtaacctctg--ccgaaatttcgtctggaacgacgaactttcttggcttttaaagtaagaataaaaggggtaaaattagagaa 3424357  T
Q  157 aagtggtcaaaatttggggtatgaca 182  Q
    || || ||||||||||||||||||||    
T  3424356 aaatgatcaaaatttggggtatgaca 3424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 10638485 - 10638404
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctct 84  Q
    ||||||||||||||||||||||| ||||| | | || | || |||| |||||||||||||| |||||||||||| |||||||    
T  10638485 aaatactgaaataaaaagaaaataaagagaggagagggtccgactcggaataaaaaatgaggtacttcaaagtaacctctct 10638404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12402956 - 12402907
Alignment:
Q  78 cctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaa 127  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  12402956 cctctctgccgaaatttcgtctgaaacgacgaaaattcctgactttaaaa 12402907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 15787927 - 15787861
Alignment:
Q  254 tggtgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatga 320  Q
    |||| |||||||| || |||||||||||| ||||| | ||||||||||| |||||||||||| ||||    
T  15787927 tggtaatatagactttaaatgtctatttaaaattgattcaatctcatagcaaggtacaatcaaatga 15787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 19772313 - 19772241
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatac 131  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||  | ||||||| |||||||    
T  19772313 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaaaacgcgacttttaaaatac 19772241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 19647352 - 19647405
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  19647352 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 19647405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 10814393 - 10814333
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgag 63  Q
    ||||||| ||||||||||||||| ||||||||| || | |  |||| ||||||||||||||    
T  10814393 aaatactaaaataaaaagaaaataaagagggaagagggtctgactcggaataaaaaatgag 10814333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 35242 - 35421
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||| || || ||| || |||| |||| |||||||||||||| |||||||||||| ||||| |  ||||||||||||||||    
T  35242 aaatactgaaataaaaagaaaataaaaagcgaagagggcccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaa 35341  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35342 acgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 23644 - 23463
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||| ||||||||||||||  ||||||||| || |||| |||| |||| ||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  23644 aaatacttaaataaaaagaaaacaaagagggaagagggcccgactcggaatcaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtcagaa 23545  T
Q  103 acgatgaaaattcccgacttta-aaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23544 atgatgaaaattcccgactttaaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 23463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 6e-62; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 10440116 - 10439936
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||| |||||  || || | |  |||| |||||||||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  10440116 aaatactgaaataaaaagaaaataaagagaaaagagggtctgactcggaataaaaaatgaggtactttaaagtaacctctctgccgaaatttcgtctgaa 10440017  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10440016 acgacgaaaattcccgactttaaaaatacgaataaaatgggcaagaatagagaaaagtggtcaaaatttggggtatgacag 10439936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 18304326 - 18304457
Alignment:
Q  51 aataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaat 150  Q
    ||||||||||||| |||||||||||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18304326 aataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaat 18304425  T
Q  151 agagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||    
T  18304426 agagaaaagtggtcaaaatttggggtatgaca 18304457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 12978592 - 12978455
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12978592 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 12978493  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12978492 aagaatagagaaaagtggtcaaaatttggggtatgaca 12978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 4952325 - 4952463
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  4952325 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggt 4952424  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  4952425 aagaatagataaaagtggtcaaaatttgaggtatgacag 4952463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 13831637 - 13831499
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13831637 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 13831538  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  13831537 aagaatagaggaaagtggtcaaaatttagggtatgacag 13831499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 13839668 - 13839530
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  13839668 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatggat 13839569  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13839568 aagaatagaggaaagtggtcaaaatttggggtatgacag 13839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 30244871 - 30244775
Alignment:
Q  86 ccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||| || ||||||| | ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  30244871 ccgaaattacgactgaaacaacgaaaattcctgactttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttgaggtatgaca 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 4941581 - 4941643
Alignment:
Q  121 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4941581 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 4941643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 247 - 352
Target Start/End: Original strand, 21471380 - 21471486
Alignment:
Q  247 gtgtgtatggtgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttga 345  Q
    |||||| || ||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |||| || ||||||||||||    
T  21471380 gtgtgtgtgatgatatatacattgaatgtctatttagaattgcttcaatctcatagcaaggtacaatcacatgacgactggagtatggcaaatgccttga 21471479  T
Q  346 ccagccc 352  Q
    |||||||    
T  21471480 ccagccc 21471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 21662962 - 21663089
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaa-atacgaataaaatgggtaagaatagaga 155  Q
    ||||||| |||||||||||| |||| ||   |||||||||||| |||||| ||| | || || |||||||| ||||||||||||||||||| || ||| |    
T  21662962 aaatgaggtacttcaaagtaacctccctgttgaaatttcgtctaaaacgacgaagactctcggctttaaaaaatacgaataaaatgggtaaaaacagata 21663061  T
Q  156 aaagtggtcaaaatttggggtatgacag 183  Q
    |||||| |||||||||||||||||||||    
T  21663062 aaagtgatcaaaatttggggtatgacag 21663089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 30245672 - 30245568
Alignment:
Q  78 cctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggta 177  Q
    ||||||| |||||||| || ||||||| | ||||||| | ||| | ||||||||||||||||||| ||| ||||||||||||||||||||| || |||||    
T  30245672 cctctcttccgaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaaatttgggta 30245573  T
Q  178 tgaca 182  Q
    |||||    
T  30245572 tgaca 30245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 30255516 - 30255420
Alignment:
Q  78 cctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggg 174  Q
    ||||||| |||||||| || ||||||| | ||||||| | ||| | ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  30255516 cctctctgccgaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggg 30255420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 338
Target Start/End: Original strand, 5721920 - 5722077
Alignment:
Q  186 tactttctcaaatataccccacctt-aacctcaaccacgtggtaaccttgaaaatgcct---tcggtgtgtatggtgatatagaccttgaatgtctattt 281  Q
    |||||||| ||||||| |||||||| ||||| | ||||||  ||||||||||||  |||   |  |||||| |||| ||||   ||||||||| ||||||    
T  5721920 tactttctaaaatatatcccacctttaacctaagccacgttataaccttgaaaaaacctctatatgtgtgtctggtaatatgtgccttgaatgcctattt 5722019  T
Q  282 agaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaat 338  Q
    ||||||||| ||||||||||| ||| |||||||| ||||  ||| |||||||||||||    
T  5722020 agaattgcttcaatctcatagcaagatacaatcaaatgactactggagtgtgacaaat 5722077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 1955691 - 1955746
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaa 111  Q
    |||||||| | |||||||||| ||||||| ||||||||| ||||||||||| ||||    
T  1955691 aaaatgaggtgcttcaaagtaacctctctgccgaaattttgtctgaaacgacgaaa 1955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 345
Target Start/End: Original strand, 7955796 - 7955875
Alignment:
Q  267 cttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttga 345  Q
    ||||| ||||| ||| ||||||||  | |||||||  |||||||||||||||||||||| ||||| | ||||||||||||    
T  7955796 cttgagtgtctgtttggaattgctttagtctcataacaaggtacaatcacatgatgactggagtggggcaaatgccttga 7955875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 20114066 - 20114119
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  20114066 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 20114119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 38248049 - 38247996
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  38248049 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 38247996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 17973707 - 17973565
Alignment:
Q  40 gcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaa 139  Q
    |||| |||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17973707 gcccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaa 17973608  T
Q  140 tgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17973607 tgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 39837490 - 39837628
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39837490 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 39837589  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  39837590 aagaatagaggaaagtggtcaaaatttggggtatgacag 39837628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 25579740 - 25579877
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25579740 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 25579839  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  25579840 aagaatagataaaagtggtcaaaatttagggtatgaca 25579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 30938419 - 30938282
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30938419 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 30938320  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30938319 aagaatagagaaaagtggtcaaaatttggggtatgaca 30938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 26873490 - 26873670
Alignment:
Q  4 aatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaat-aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    |||||||||||||||||||||| ||||| ||| |  |||| |||| |||| ||||||| || ||||| |||||| ||||| |  ||||||||||||||||    
T  26873490 aatactgaaataaaaagaaaataaagagagaagacggccctactcggaatcaaaaaataaggtactttaaagtaacctctttgtcgaaatttcgtctgaa 26873589  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26873590 acgacgaaaatttccgacattacaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 26873670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 26875940 - 26876119
Alignment:
Q  4 aatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaat-aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    |||||||||||||||||||||| ||||| ||| |  |||| |||| |||| |||||||||| || || |||||| ||||| |  ||||||||||||||||    
T  26875940 aatactgaaataaaaagaaaataaagagagaagatggccctactcggaatcaaaaaatgaggtattttaaagtaacctctttgtcgaaatttcgtctgaa 26876039  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||  |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26876040 acgacaaaaatttccgacattaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 26876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 39845541 - 39845670
Alignment:
Q  53 taaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 152  Q
    ||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39845541 taaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 39845640  T
Q  153 agaaaagtggtcaaaatttggggtatgaca 182  Q
    || |||||||||||||||||||||||||||    
T  39845641 aggaaagtggtcaaaatttggggtatgaca 39845670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 17664568 - 17664706
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| | ||| |  | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  17664568 actcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgatgaaaattcccgactctaaaaatacgaataaaatgggc 17664667  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  17664668 aaggatagagaaaagtggtcaaaatttggggtatgacag 17664706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 1407001 - 1407138
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  1407001 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcacaactttaaaaatacgaataaaatgggt 1407100  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  1407101 aagaatagaggaaagtggtcaaaatttggggtatgaca 1407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 4839715 - 4839847
Alignment:
Q  50 gaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaa 149  Q
    |||| ||||||||| |||||||||||| | ||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  4839715 gaatcaaaaatgaggtacttcaaagtaacttctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggtaagaa 4839814  T
Q  150 tagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| ||||||||||||||||||||||    
T  4839815 tagagaaaagcggtcaaaatttggggtatgaca 4839847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 17683724 - 17683861
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| | ||| |  | |||||||||||||||||| |||||||||||||| |||||||||||||||||||||     
T  17683724 actcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgacgaaaattcccgactctaaaaatacgaataaaatgggc 17683823  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  17683824 aaggatagagaaaagtggtcaaaatttggggtatgaca 17683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 16052789 - 16052707
Alignment:
Q  267 cttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgacca 348  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||| || || |||||| |||||||||||||||    
T  16052789 cttgaatgtctgtttcgaattgcttcaatctcatagcaaggtacaatcacatgacgattgaagtgtggcaaatgccttgacca 16052707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 4582306 - 4582203
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| ||| || | | ||| |||  ||||||| || ||| |||||| |||| ||||||||||||||||||||||||  ||||||    
T  4582306 tctctgccgaaatttcgtctaaaatgacggacatttccggttttaaaagtatgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttaaggtatg 4582207  T
Q  180 acag 183  Q
    ||||    
T  4582206 acag 4582203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 6670772 - 6670710
Alignment:
Q  121 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  6670772 tttaaaaatacgaataaaatttggtaaaaataga-aaaagtggtcaaaatttggggtatgacag 6670710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 22895054 - 22894959
Alignment:
Q  257 tgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagcc 351  Q
    ||||||| ||| ||||||||| |||||||| ||| ||||||||||| |||||||||||| | ||  ||| ||||||| ||||||||||||| ||||    
T  22895054 tgatatataccctgaatgtctgtttagaatggcttcaatctcatagaaaggtacaatcatacgacaactggagtgtggcaaatgccttgactagcc 22894959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 6663099 - 6663042
Alignment:
Q  125 aaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||  ||||| |||||| ||||||||| ||||||||||||||||||    
T  6663099 aaaatacgaataaaatttggtaaaaataga-aaaagtggttaaaatttggggtatgaca 6663042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 6743501 - 6743444
Alignment:
Q  125 aaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||  ||||| |||||| ||||||||| ||||||||||||||||||    
T  6743501 aaaatacgaataaaatttggtaaaaataga-aaaagtggttaaaatttggggtatgaca 6743444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 28901869 - 28901768
Alignment:
Q  247 gtgtgtatggtgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgactga-gtgtgacaaatgccttga 345  Q
    |||||| || ||||||| ||||| || |||||||||||| |||| ||||||| ||| ||| ||||||||||||| |||  | | ||||||||| ||||||    
T  28901869 gtgtgtgtgatgatatataccttaaaagtctatttagaa-tgcttcaatctcgtagcaagatacaatcacatgacgacaaacgagtgacaaattccttga 28901771  T
Q  346 cca 348  Q
    |||    
T  28901770 cca 28901768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 23090667 - 23090611
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    |||||||| ||||||||||||||||||||  | ||||||||||| ||| ||| ||||    
T  23090667 aaaatgaggtacttcaaagtatcctctctgtccaaatttcgtctaaaatgattaaaa 23090611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 25700329 - 25700273
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    |||||||| |||||||||||| |||| || |||||||||||| ||||| ||| ||||    
T  25700329 aaaatgaggtacttcaaagtaacctcccttccgaaatttcgtttgaaatgattaaaa 25700273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 50824535 - 50824352
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaaga----gggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtc 98  Q
    ||||||||||||||||||||||| ||||    | ||| || | || |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  50824535 aaatactgaaataaaaagaaaataaagaaagagagaagagggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtc 50824436  T
Q  99 tgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50824435 tgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 50824352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 50851325 - 50851508
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaaga----gggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtc 98  Q
    ||||||||||||||||||||||| ||||    | ||| || | || |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  50851325 aaatactgaaataaaaagaaaataaagaaagagagaagagggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtc 50851424  T
Q  99 tgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50851425 tgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 50851508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 14538494 - 14538671
Alignment:
Q  7 actgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctcta-ccgaaatttcgtctgaaacg 105  Q
    ||||||||||||||||||| ||||| ||| || |||| |||| |||||||||||||| |||||||||||| ||||| |  ||||||||||||||||||||    
T  14538494 actgaaataaaaagaaaataaagagagaagagggcccgactcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaatttcgtctgaaacg 14538593  T
Q  106 atgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14538594 acgaaaattcccgactttaaaaatatgaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgacag 14538671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 27341220 - 27341401
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaa-tgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    ||||||||||||| ||||||||| ||||||||| || |||  |||| |||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||    
T  27341220 aaatactgaaatagaaagaaaataaagagggaagagggcctgactcggaataaaaaaatgaggtacttcaaagtaacctttctgccgaaatttcgtctga 27341319  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27341320 aacgacgaaaattcccgactttaaaaatatgaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgacag 27341401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 2211418 - 2211239
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||| ||||| ||| || |||  |||| |||||||||||||| || || ||| || ||||| | |||||||||||||| ||    
T  2211418 aaatactgaaataaaaagaaaataaagagagaagagggcctgactcggaataaaaaatgaggtattttaaaataccctctttgccgaaatttcgtcttaa 2211319  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  2211318 acgacgaaaattcctgactttaaaaatacgaataaaataggtaagaatagagaaaagtggtcaaaatttagggtatgaca 2211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 8154572 - 8154710
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8154572 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 8154671  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  8154672 aagaatagaggaaagtggtcaaaatttggggtatgacag 8154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 41006693 - 41006555
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41006693 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 41006594  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  41006593 aagaatagagaaaaatggtcaaaatttggggtatgacag 41006555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 41015473 - 41015335
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41015473 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 41015374  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  41015373 aagaatagagaaaaatggtcaaaatttggggtatgacag 41015335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 9525357 - 9525500
Alignment:
Q  40 gcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaa 139  Q
    |||| |||| |||||||||||||| || || |||||| ||| ||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  9525357 gcccgactcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgaataaaa 9525456  T
Q  140 tgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  9525457 tgggtaagaatagagaaaagtgatcaaaatttggggtatgacag 9525500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 9555031 - 9555173
Alignment:
Q  40 gcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaa 139  Q
    |||| |||| |||||||||||||| || || |||||| ||| ||| |||||||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  9555031 gcccgactcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgagtaaaa 9555130  T
Q  140 tgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9555131 tgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 9555173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 28470103 - 28470282
Alignment:
Q  3 aaatactgaaataaaaag-aaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    |||||| ||||||||||  ||||| ||||| ||| || | || |||| |||||||||||||| ||||||| ||||  || | |  |||||||||||||||    
T  28470103 aaataccgaaataaaaaataaaataaagagagaaaagggtccgactcagaataaaaaatgaggtacttcatagtaatcttt-tgtcgaaatttcgtctga 28470201  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||| ||||||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  28470202 aacgacgaaaatttctgactttaaaaatacgaataaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 28470282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 17933780 - 17933654
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| |||||||||||| ||||||    ||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17933780 aaatgaggtacttcaaagtaacctctccgaagaaatttcgtctgaaataacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 17933681  T
Q  157 aagtggtcaaaatttggggtatgacag 183  Q
    || ||||||||||||||||||||||||    
T  17933680 aattggtcaaaatttggggtatgacag 17933654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 43470492 - 43470615
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagaga 155  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||||  ||||||| || |||||||||||||||||||| |||||| |||||| |    
T  43470492 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgaataaaattctcggctttaaaaatacgaataaaaagggtaaaaataga-a 43470590  T
Q  156 aaagtggtcaaaatttggggtatga 180  Q
    ||||| |||||||||||||||||||    
T  43470591 aaagtagtcaaaatttggggtatga 43470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 17919324 - 17919198
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| ||||| |||||| ||||||   |||||||||||||||||  | |||||||  || ||||||||||||||||||||||| ||| |||||||||    
T  17919324 aaatgaggtactttaaagtaacctctccgacgaaatttcgtctgaaataacgaaaattttcggctttaaaaatacgaataaaatggataaaaatagagaa 17919225  T
Q  157 aagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||    
T  17919224 aagtggtcaaaatttggggtatgacag 17919198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 17628329 - 17628265
Alignment:
Q  118 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17628329 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 16816145 - 16816269
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| |||||||||||| ||||||   | |||||||||||||||  | ||||||| ||| |||||||||||||||||||||| |||| |||||||||    
T  16816145 aaatgaggtacttcaaagta-cctctccgtcaaaatttcgtctgaaataacgaaaatttccggctttaaaaatacgaataaaatgagtaaaaatagagaa 16816243  T
Q  157 aagtggtcaaaatttggggtatgacag 183  Q
    ||||||||||||||| |||||||||||    
T  16816244 aagtggtcaaaattt-gggtatgacag 16816269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 21186872 - 21186747
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagaga 155  Q
    |||||||| || |||||| || |||| || |||||||||||| |||||| | |||||||| || |||||||| |||||||||||||| ||| || ||| |    
T  21186872 aaaatgaggtatttcaaaata-cctccctgccgaaatttcgtttgaaacaacgaaaattctcggctttaaaagtacgaataaaatggataaaaacagata 21186774  T
Q  156 aaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||||||    
T  21186773 aaagtggtcaaaatttggggtatgaca 21186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 18349658 - 18349560
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtat 178  Q
    ||||| |||||||||||||| |||||| | | ||| |||| ||||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  18349658 tctctgccgaaatttcgtctaaaacgacggacatttccgattttaaaagtacgaataaaatgtgtaaaaatagagaaaagttgtcaaaatttggggtat 18349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 8197659 - 8197762
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| ||||||||| |||| |||||| | | ||| |||  ||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  8197659 tctctgccgaaattttgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatg 8197758  T
Q  180 acag 183  Q
    ||||    
T  8197759 acag 8197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 11520733 - 11520826
Alignment:
Q  257 tgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccag 349  Q
    ||||||| |||||||||||||  ||| ||||||| ||||||||||| |||||||||||| |||| |||| ||||||| ||||||||||||||||    
T  11520733 tgatatataccttgaatgtctgcttataattgcttcaatctcatagcaaggtacaatcatatgacgactagagtgtggcaaatgccttgaccag 11520826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 30445 - 30541
Alignment:
Q  86 ccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||| |||||| | | ||| |||  ||||||| ||| || |||||| |||| |||||||||||||||||||||||||||||||||||    
T  30445 ccgaaatttcgtctaaaacgacggacatttccggttttaaaagtacaaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 30541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 18039105 - 18039011
Alignment:
Q  88 gaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||| | ||   ||| || | || |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  18039105 gaaatttcgtctgaaacaacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 18039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 13272723 - 13272670
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||| ||| ||||    
T  13272723 atgaggtacttcaaagtatcctctctgccgaaattttgtctgaaatgattaaaa 13272670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 4505979 - 4506032
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  4505979 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 4506032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 16288733 - 16288692
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgt 97  Q
    |||||||| |||||||||||| ||||||| ||||||||||||    
T  16288733 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgt 16288692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 17657683 - 17657630
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  17657683 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 17657630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 27976605 - 27976552
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  27976605 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 27976552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 1477814 - 1477758
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaat 113  Q
    ||||||| |||||||||||| |||| || ||||||||| |||||||| ||| |||||    
T  1477814 aaatgaggtacttcaaagtaacctccctgccgaaattttgtctgaaatgataaaaat 1477758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 6958978 - 6959006
Alignment:
Q  155 aaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||    
T  6958978 aaaagtggtcaaaatttggggtatgacag 6959006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 17618130 - 17618174
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaa 103  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||||    
T  17618130 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaa 17618174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 121365 - 121228
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  121365 actcggaatcaaaaatgatttacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 121266  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  121265 aagaatagagaaaagtggtcaaaatttggggtatgaca 121228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 11171 - 10993
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||| ||||| ||| || |||| | || |||| |||| |||| |||||||||||| ||||||| |||||||||||||||||    
T  11171 aaatactgaaataaaaagaaaataaagagagaagagggcccgattcggaatcaaaa-tgaggtacttcaaagtaacctctctgccgaaatttcgtctgaa 11073  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11072 acgacgaaaatttccgactttaacaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 10993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 29186164 - 29186343
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||| ||||| ||||| ||| || | || |||| ||||||||||||||  ||||||||||| ||||| |  ||||||||||||||||    
T  29186164 aaatactgaaataaaaataaaataaagagagaaaagggtccgactcggaataaaaaatgaggcacttcaaagtaacctctttgtcgaaatttcgtctgaa 29186263  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29186264 acgacgaaaattcccgactttaaaaatacgaataaaatgggtaaggatagagaaaagtggtcaaaatttggggtatgaca 29186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 20372799 - 20372979
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||| ||||||||| ||||||| | ||| ||| || |  | |||| |||||||||||||| |||||||||||| |||||||  ||||||||||||||||    
T  20372799 aaataatgaaataaagagaaaataatgagagaagagggttcgactcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaa 20372898  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20372899 acgacgaaaattcccgactttaaaaatacgaataaaatcggtaagaatagagaaaagtggtcaaaatttggggtatgacag 20372979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 20398521 - 20398700
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||| ||||||||| ||||||| | ||| ||| || |  | |||| |||||||||||||| |||||||||||| |||||||  ||||||||||||||||    
T  20398521 aaataatgaaataaagagaaaataatgagagaagagggttcgactcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaa 20398620  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20398621 acgacgaaaattcccgactttaaaaatacgaataaaatcggtaagaatagagaaaagtggtcaaaatttggggtatgaca 20398700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 23349968 - 23350142
Alignment:
Q  9 tgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatg 108  Q
    ||||||||| ||||||| ||||| ||| || |||| |||| |||||||||||||| |||||||||||| ||||| | |||||||||||||||||| || |    
T  23349968 tgaaataaagagaaaataaagagagaagagggcccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaaatgacg 23350067  T
Q  109 aaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23350068 agaattcccgactttaaaaatacgaataaaatgggtaaaaatagagaaaaatggtcaaaatttggggtatgacag 23350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 24956774 - 24956912
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24956774 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 24956873  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24956874 aagaatagagaaaagtggtcaaaatttggggtatgacag 24956912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 24965237 - 24965375
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24965237 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 24965336  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24965337 aagaatagagaaaagtggtcaaaatttggggtatgacag 24965375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 43597974 - 43598111
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  43597974 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaataaaatgggt 43598073  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43598074 aagaatagaggaaagtggtcaaaatttggggtatgaca 43598111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 43603466 - 43603603
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  43603466 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaataaaatgggt 43603565  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43603566 aagaatagaggaaagtggtcaaaatttggggtatgaca 43603603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 43608958 - 43609095
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  43608958 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaataaaatgggt 43609057  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43609058 aagaatagaggaaagtggtcaaaatttggggtatgaca 43609095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 1728087 - 1728227
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  1728087 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaataaaatgggt 1728186  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacagca 185  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  1728187 aagaatagaggaaagtggtcaaaatttggggtatgacagca 1728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 31411069 - 31410890
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    |||||||||||||||||||| || ||||| ||| || |||| |||  |||||||||||||| |||||||||||| ||||| |  ||||||||||| | ||    
T  31411069 aaatactgaaataaaaagaagataaagagagaagagggcccgactgagaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgttttaa 31410970  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| |||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  31410969 acgacgaaaattcctaactttaaaaatacgaataaaatgggttagaatagagaaatgtggtcaaaatttggggtatgaca 31410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 28852687 - 28852549
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  28852687 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaataaaatgggt 28852588  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  28852587 aagaatagaggaaagtggtcaaaatttggggtatgacag 28852549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 28844077 - 28843940
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  28844077 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaataaaatgggt 28843978  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  28843977 aagaatagaggaaagtggtcaaaatttggggtatgaca 28843940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 31421916 - 31421789
Alignment:
Q  55 aaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagag 154  Q
    ||||||||| |||||||||||| | ||| |  |||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  31421916 aaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaatttccgacttcaaaaatacgaataaaatgggtaagaatagag 31421817  T
Q  155 aaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||| ||||||||||    
T  31421816 aaaagtggtcaaaattttgggtatgaca 31421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 19223666 - 19223555
Alignment:
Q  71 aaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatt 170  Q
    |||||| |||||||  ||| ||||| |||||||||| || ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  19223666 aaagtaacctctctgtcgagatttcatctgaaacgacgacaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 19223567  T
Q  171 tggggtatgaca 182  Q
    ||||||||||||    
T  19223566 tggggtatgaca 19223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 24841367 - 24841453
Alignment:
Q  267 cttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccc 352  Q
    ||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||| |||||||||||||    
T  24841367 cttgaatgtttgtttagaattgcttcaatctcatagtaaggtccaatcacatgatgactaaagtgtgacaaatcccttgaccagccc 24841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 17027056 - 17027225
Alignment:
Q  186 tactttctcaaatataccccaccttaacctcaaccacgtggtaaccttgaaaatgccttcg--gtgtgtatggtgatatagaccttgaatgtctatttag 283  Q
    ||||||||||||| || |||||||||||||||| || ||  ||||||| |||| |||||    |||||| || ||||| | ||||||| ||||| ||||     
T  17027056 tactttctcaaatgtatcccaccttaacctcaatcatgttataacctttaaaaggccttatatgtgtgtgtgatgataaataccttgagtgtctgtttat 17027155  T
Q  284 aattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccc 352  Q
    |||||||  ||| |||||| |||| |||||||||||| |||| |||| |||||||||| |||| ||||||    
T  17027156 aattgcttaaatgtcataggaaggaacaatcacatgacgactggagtatgacaaatgcattgatcagccc 17027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 41099745 - 41099838
Alignment:
Q  86 ccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    |||||||||||||| |||||| | | ||| |||  ||||||| ||||||  ||||| |||| |||||| |||||||||||||||||||||||||    
T  41099745 ccgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacgaaatgtgtaaaaatagataaaagtggtcaaaatttggggtatg 41099838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 348
Target Start/End: Complemental strand, 11274871 - 11274779
Alignment:
Q  257 tgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgacca 348  Q
    ||||||| ||||||||||| | ||| |||| ||| |||| ||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||    
T  11274871 tgatatataccttgaatgtttgtttggaatcgcttcaatttcatagtaaggtaaaatcacatgacaactagagtgtgacaaacgccttgacca 11274779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 348
Target Start/End: Original strand, 22754557 - 22754641
Alignment:
Q  265 accttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgacca 348  Q
    |||||||||| || ||||||||| || |||||| |||| ||||||||||||||||| |||| ||||||| ||||||| |||||||    
T  22754557 accttgaatgcctgtttagaatttcttcaatcttatagcaaggtacaatcacatgacgactggagtgtggcaaatgctttgacca 22754641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 23028007 - 23028053
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaa 103  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  23028007 aaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaa 23028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 23037969 - 23037923
Alignment:
Q  58 aatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaac 104  Q
    |||||| |||||||||||| ||||||| |||||||||||||||||||    
T  23037969 aatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaac 23037923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 19331160 - 19331247
Alignment:
Q  254 tggtgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgc 340  Q
    |||||||||  | ||||||||||| | || ||||||| |||||||| || |||||| |||||||||| | || |||||||||||||||    
T  19331160 tggtgatatgtatcttgaatgtctctatataattgcttcaatctcaaagcaaggtagaatcacatgacggctggagtgtgacaaatgc 19331247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 21929285 - 21929236
Alignment:
Q  133 aataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||| ||  ||||||| | |||||||||||||||||||||    
T  21929285 aataaaatgggtaaaaagcgagaaaaattgtcaaaatttggggtatgaca 21929236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 21988620 - 21988673
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  21988620 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 21988673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 21997264 - 21997317
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  21997264 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 21997317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 23606368 - 23606421
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  23606368 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 23606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 23635129 - 23635076
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  23635129 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 23635076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 23829022 - 23829075
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  23829022 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 23829075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 23837763 - 23837816
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  23837763 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 23837816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 31550458 - 31550511
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| |||||||||||||| ||||| ||||||||| |||||||| ||| ||||    
T  31550458 atgaggtacttcaaagtatcatctctgccgaaattttgtctgaaatgattaaaa 31550511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 21852579 - 21852635
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    |||||||| |||||||||||| |||| || |||||||||||| ||||| ||| ||||    
T  21852579 aaaatgaggtacttcaaagtaacctccctgccgaaatttcgtttgaaatgattaaaa 21852635  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 21869103 - 21869159
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    |||||||| |||||||||||| |||| || |||||||||||| ||||| ||| ||||    
T  21869103 aaaatgaggtacttcaaagtaacctccctgccgaaatttcgtttgaaatgattaaaa 21869159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 4570 - 4390
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaa-tgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    ||||||||||||||||||||||| ||||| ||| || |||| |||| |||||||||| |||| |||||||||||| |||||||  |||||||||||||||    
T  4570 aaatactgaaataaaaagaaaataaagagagaagagggcccgactcggaataaaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctga 4471  T
Q  102 aacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||||    
T  4470 aacgatgaaaattaccgactttaaaaatatgaataaaatgggtaagaatagagaaaaaatgtcaaaatttggggtatgaca 4390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 33208 - 33035
Alignment:
Q  9 tgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatg 108  Q
    ||||||||| ||||||| ||||  ||| || | || |||| |||||||||||||| ||||| |||||| ||||| | ||||||||||||||||||||| |    
T  33208 tgaaataaagagaaaataaagaaagaagagggtccgactcggaataaaaaatgaggtactttaaagtaacctctttgccgaaatttcgtctgaaacgacg 33109  T
Q  109 aaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33108 aaaattcccgactttaaaaatacgtataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 33035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 815 - 995
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||| ||||||||||||||| ||||| ||| || |||| |||| |||| ||||||||| || ||||||||| ||| ||| |||||||||||||||||    
T  815 aaatactaaaataaaaagaaaataaagagagaagagggcccgactcggaatcaaaaatgaggtatttcaaagtaacctttctgccgaaatttcgtctgaa 914  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  915 acgacgaaaattcccagctttaaaaatacgaataaaatgggtaagaatagagaaagctggtcaaaatttggggtatgacag 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 35038035 - 35037884
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||||||||||| ||||||||| || |||  |||| |||||||||||||| || ||||||||| |||||||| ||||||||||||||||    
T  35038035 aaatactgaaataaaaagaaaataaagagggaagagggcctgactcggaataaaaaatgaggtatttcaaagtaacctctctatcgaaatttcgtctgaa 35037936  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagag 154  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35037935 acgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagag 35037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 15944485 - 15944623
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15944485 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 15944584  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15944585 aagaatagagaaaagtggtcaaaatttggggtatgacag 15944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 35138730 - 35138592
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35138730 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 35138631  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35138630 aagaatagagaaaagtggtcaaaatttggggtatgacag 35138592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 35147066 - 35146928
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35147066 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 35146967  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35146966 aagaatagagaaaagtggtcaaaatttggggtatgacag 35146928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 41233772 - 41233910
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41233772 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 41233871  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41233872 aagaatagagaaaagtggtcaaaatttggggtatgacag 41233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 14583062 - 14582925
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14583062 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 14582963  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14582962 aagaatagagaaaagtggtcaaaatttggggtatgaca 14582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 15953000 - 15953137
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15953000 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 15953099  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15953100 aagaatagagaaaagtggtcaaaatttggggtatgaca 15953137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 38168285 - 38168422
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38168285 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 38168384  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  38168385 aagaatagagaaaagtggtcaaaatttggagtatgaca 38168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 20621655 - 20621517
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| | ||| |  |||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  20621655 actcagaataaaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaattcccgacttcaaaaacacgaataaaatgggt 20621556  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20621555 aagaatagagaaaagtggtcaaaatttggggtatgacag 20621517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 42565857 - 42565995
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  42565857 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaataaaatgggt 42565956  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  42565957 aagaatagaggaaagtggtcaaaatttggggtatgacag 42565995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 42574481 - 42574618
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  42574481 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaataaaatgggt 42574580  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  42574581 aagaatagaggaaagtggtcaaaatttggggtatgaca 42574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 17687361 - 17687463
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17687361 tctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 17687460  T
Q  180 aca 182  Q
    |||    
T  17687461 aca 17687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 20372251 - 20372378
Alignment:
Q  54 aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaataga 153  Q
    |||||||||| |||||||||||| ||| | |  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20372251 aaaaaatgaggtacttcaaagtaaccttt-tgtcgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggcaaggataga 20372349  T
Q  154 gaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||||||||    
T  20372350 gaaaagtggtcaaaatttggggtatgaca 20372378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 25483712 - 25483601
Alignment:
Q  71 aaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatt 170  Q
    |||||| |||||||  ||| |||||||||||||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  25483712 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25483613  T
Q  171 tggggtatgaca 182  Q
    ||||||||||||    
T  25483612 tggggtatgaca 25483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 25491318 - 25491207
Alignment:
Q  71 aaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatt 170  Q
    |||||| |||||||  ||| |||||||||||||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  25491318 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25491219  T
Q  171 tggggtatgaca 182  Q
    ||||||||||||    
T  25491218 tggggtatgaca 25491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 44372800 - 44372705
Alignment:
Q  87 cgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  44372800 cgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttggggtatgaca 44372705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 44388711 - 44388616
Alignment:
Q  87 cgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  44388711 cgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttggggtatgaca 44388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 35303862 - 35303737
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| ||||||||| || ||||||| ||||||||||||||||||||| |||| |||  | |||| |||||| |||||||| |||||| |  ||||||    
T  35303862 aaatgaggtacttcaaattaacctctctgccgaaatttcgtctgaaacgacgaaatttcttggcttttaaaataagaataaaaggggtaaaatcagagaa 35303763  T
Q  157 aagtggtcaaaatttggggtatgaca 182  Q
    || | |||||||||||||||||||||    
T  35303762 aaatagtcaaaatttggggtatgaca 35303737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 27606606 - 27606709
Alignment:
Q  78 cctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggta 177  Q
    ||||||| |||||||||||||||| ||||  |||||||||| |||||||| |||||||||||| | ||| ||||||||||||| |||||||||||| |||    
T  27606606 cctctctgccgaaatttcgtctgagacgac-aaaattcccgtctttaaaagtacgaataaaattgataaaaatagagaaaagtagtcaaaatttggagta 27606704  T
Q  178 tgaca 182  Q
    |||||    
T  27606705 tgaca 27606709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 24285798 - 24285696
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    |||||||||||||||||||| |||||| | ||||| ||   ||||||| |||||| |||||| |||| |||| |||||||||||||||||||||||||||    
T  24285798 tctctaccgaaatttcgtcttaaacgacggaaatttccagttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatg 24285699  T
Q  180 aca 182  Q
    |||    
T  24285698 aca 24285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 42249418 - 42249520
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| |||||| | | |||  ||| ||||||| ||||||  ||||| |||| ||||||||||||||||||||||||||||||||    
T  42249418 tctctgccgaaatttcgtctaaaacgacggacattttcgattttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatg 42249517  T
Q  180 aca 182  Q
    |||    
T  42249518 aca 42249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 26903296 - 26903396
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| |||||||| | |||  ||  ||||||| |||||| |||||| |||| |||||||||||||||||||||||| |||||||    
T  26903296 tctctgccgaaatttcgtctaaaacgatggacattttcggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatg 26903395  T
Q  180 a 180  Q
    |    
T  26903396 a 26903396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 34070567 - 34070669
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| ||||||||| |||| |||||| | | ||| |||  ||||||| |||||| |||||| |||| |||||||||||||| |||||||||||||||||    
T  34070567 tctctgccgaaattttgtctaaaacgacggacattaccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgatcaaaatttggggtatg 34070666  T
Q  180 aca 182  Q
    |||    
T  34070667 aca 34070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 24292475 - 24292371
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcc-cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtat 178  Q
    |||||||||||||||||||| |||||| | | |||   ||  ||||||| |||||| |||||| |||| |||| ||||||||||||||||||||||||||    
T  24292475 tctctaccgaaatttcgtcttaaacgacggacatttttcggttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtat 24292376  T
Q  179 gacag 183  Q
    |||||    
T  24292375 gacag 24292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 351
Target Start/End: Complemental strand, 22389265 - 22389179
Alignment:
Q  265 accttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgactgagtgtgacaaatgccttgaccagcc 351  Q
    ||||||||||| | |||| |||| || |||| |||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||||    
T  22389265 accttgaatgtttgtttataattacttcaatttcatagcaaggtacagtcacatgacgactgggtgtggcaaataccttgaccagcc 22389179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 18989312 - 18989389
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacga 133  Q
    |||||||| ||||| |||||| ||||||||||| ||||||||||||  |||  |||||||||| ||||||||| ||||    
T  18989312 aaaatgaggtacttgaaagtaacctctctaccgtaatttcgtctgatgcgacaaaaattcccggctttaaaaagacga 18989389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 39730119 - 39730178
Alignment:
Q  292 caatctcatagtaaggtacaatcacatgatgac-tgagtgtgacaaatgccttgaccagc 350  Q
    |||||||||||||| ||||||||||| |||||| |||||||| ||||| |||||||||||    
T  39730119 caatctcatagtaatgtacaatcacacgatgacttgagtgtggcaaataccttgaccagc 39730178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 21322814 - 21322875
Alignment:
Q  121 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||||||||||||||||||||||    
T  21322814 tttaaaaatacgaataaaatttggtacaaataga-aaaagtggtcaaaatttggggtatgaca 21322875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 20917570 - 20917520
Alignment:
Q  132 gaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||  ||| |||||||||||||||||||||||| | ||||||||    
T  20917570 gaataaaatgaataaaaatagagaaaagtggtcaaaatttagagtatgaca 20917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 27683381 - 27683434
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  27683381 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 27683434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 15941 - 15813
Alignment:
Q  54 aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaataga 153  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  15941 aaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaataga 15842  T
Q  154 gaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||||||||||||    
T  15841 gaaaagtggtcaaaatttggggtatgaca 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 9e-52; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 32137640 - 32137819
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaa 102  Q
    ||||||||||||||| ||||||| ||||| ||| || |||| |||| |||||||||||||| |||||||||||| | | | |   |||||||||||||||    
T  32137640 aaatactgaaataaagagaaaataaagagagaagagggcccgactcggaataaaaaatgaggtacttcaaagtaacttatttgttgaaatttcgtctgaa 32137739  T
Q  103 acgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  32137740 acgacgaaaattcccgactttaaaaatacgaataaaatggataagaatagagaaaagtgatcaaaatttggggtaagaca 32137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 3432818 - 3432956
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| |  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3432818 actcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 3432917  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3432918 aagaatagaggaaagtggtcaaaatttggggtatgacag 3432956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 31548660 - 31548522
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31548660 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 31548561  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31548560 aagaatagagaaaagtggtcaaaatttggggtatgacag 31548522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 31540091 - 31539954
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31540091 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggt 31539992  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31539991 aagaatagagaaaagtggtcaaaatttggggtatgaca 31539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 41746586 - 41746758
Alignment:
Q  11 aaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctcta-ccgaaatttcgtctgaaacgatga 109  Q
    ||||||||||||||| ||||| ||| || |||| |||| |||||||||||||| |||||||||||| ||||| |  ||||||||| ||||||||||| ||    
T  41746586 aaataaaaagaaaataaagagagaagagggcccgactcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaattttgtctgaaacgacga 41746685  T
Q  110 aaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  41746686 aaattcccgactttaaaaatatgaataaaatggataagaatagataaaagtggtcaaaatttgggatatgaca 41746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 35103992 - 35104129
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||| ||||||||| |||||||||||| ||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  35103992 actcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccaactttaaaaatacgaataaaatgggt 35104091  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35104092 aagaatagagaaaagtggtcaaaatttggggtatgaca 35104129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 29221429 - 29221554
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| || |||||| || ||||||| ||||||||||||||||||    ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  29221429 aaatgaggtatttcaaaata-cctctctgccgaaatttcgtctgaaatagcgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 29221527  T
Q  157 aagtggtcaaaatttggggtatgacag 183  Q
    |||| ||||||||||||||||||||||    
T  29221528 aagtagtcaaaatttggggtatgacag 29221554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 23223131 - 23223220
Alignment:
Q  257 tgatatagaccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttga 345  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| || | ||||||| ||||||||||||    
T  23223131 tgatatataccttgaatgtctatttagaattgctttaatctcatagcaaggtacaatcacatgacgattggagtgtggcaaatgccttga 23223220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 44320132 - 44320257
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| |||||  ||||| |||| || | ||||||||||||||||||| ||   ||| || | || |||||||||||||||||||||| ||  |||||    
T  44320132 aaatgaggtactttcaagtaacctccctgctgaaatttcgtctgaaacgacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaa 44320231  T
Q  157 aagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||    
T  44320232 aagtggtcaaaatttggggtatgaca 44320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 21498861 - 21498963
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| |||||| | | ||| |||  ||||||| ||||||  ||||| |||| ||||||||||||||||||||||||||||||||    
T  21498861 tctctgccgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatg 21498960  T
Q  180 aca 182  Q
    |||    
T  21498961 aca 21498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 51058359 - 51058450
Alignment:
Q  88 gaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatga 180  Q
    |||||||||| |||||| | ||||||||||  ||||||||||||||||||||||  | |||| | ||||||||| ||||||||||||||||||    
T  51058359 gaaatttcgtttgaaacaacgaaaattcccagctttaaaaatacgaataaaatgaat-agaacaaagaaaagtgatcaaaatttggggtatga 51058450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 28457673 - 28457556
Alignment:
Q  65 tacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaa-taaaatgggtaagaata-gagaaaagtgg 162  Q
    |||||||||||| |||||||  |||||||||||||||||||| ||   |||  | | || ||||||| || |||||||||||| || | |||||||||||    
T  28457673 tacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgatccttcttggcgtttaaaatacaaaataaaatgggtaaaaaaacgagaaaagtgg 28457574  T
Q  163 tcaaaatttggggtatga 180  Q
    ||||||||||||||||||    
T  28457573 tcaaaatttggggtatga 28457556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 8241438 - 8241487
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacga 106  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  8241438 aaatgaggtactttaaagtaacctctctaccgaaatttcgtctgaaacga 8241487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 13450202 - 13450142
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgag 63  Q
    ||||||||||||||||||||||| ||||| ||| ||||||| |||| |||| |||||||||    
T  13450202 aaatactgaaataaaaagaaaataaagagagaagagagcccgactcggaatcaaaaatgag 13450142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 8579413 - 8579341
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatac 131  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||  | ||||||| |||||||    
T  8579413 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaaaacgcgacttttaaaatac 8579341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 20314058 - 20314092
Alignment:
Q  148 aatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||| ||||||||||||||||||||||||||||    
T  20314058 aatagaaaaaagtggtcaaaatttggggtatgaca 20314092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 12465698 - 12465751
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  12465698 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 12465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 31313020 - 31313097
Alignment:
Q  266 ccttgaatgtctatttagaattgctccaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgcct 342  Q
    |||||| |||||||||||||||| |  |||||||||| |||||||||| |||| | || | ||||||| |||||||||    
T  31313020 ccttgattgtctatttagaattggtttaatctcatagcaaggtacaataacatcacgattggagtgtggcaaatgcct 31313097  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 52100078 - 52100017
Alignment:
Q  121 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||| |||||| |||||| |||| || |||||||| |||||||||||| || |||||||    
T  52100078 tttaaaagtacgaacaaaatgtgtaaaaacagagaaaaatggtcaaaatttaggatatgaca 52100017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 14397286 - 14397342
Alignment:
Q  294 atctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccag 349  Q
    ||||||||| ||||||||||||||||| ||| | |||||| ||||| ||||||||||    
T  14397286 atctcatagcaaggtacaatcacatgacgacggtagtgtggcaaataccttgaccag 14397342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 12 - 149
Alignment:
Q  45 actccgaataaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggt 144  Q
    |||| |||||||||||||| |||||||||||| ||||| | || |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  12 actcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaataaaatgggt 111  T
Q  145 aagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  112 aagaatagaggaaagtggtcaaaatttggggtatgaca 149  T

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Target: scaffold0039 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 40807 - 40898
Alignment:
Q  91 atttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40807 atttcgtctgaaacgatgaaaatgctcgactttaaaaatacgaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 40898  T

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Target: scaffold0170 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 7129 - 7255
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagaga 155  Q
    |||||||| |||||||||||| |||  || ||||||||||||||||||| | |||||||| || |||||||| ||| |||||||||||||| || |||||    
T  7129 aaaatgaggtacttcaaagtaaccttcctcccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacaaataaaatgggtaaaaacagaga 7228  T
Q  156 aaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||| ||||||||||    
T  7229 aaagtggtcaaaatttagggtatgaca 7255  T

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Target: scaffold0431 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 264 - 139
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| ||||||||||||  ||||    |||||||||||||||||  | ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  264 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 165  T
Q  157 aagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||    
T  164 aagtggtcaaaatttggggtatgaca 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 20422 - 20547
Alignment:
Q  57 aaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaa 156  Q
    ||||||| |||| ||||||| ||||||| ||||||||||||||||||| | |||||||| || |||||||| |||||| |||||| |||| |  | ||||    
T  20422 aaatgaggtactccaaagtaacctctctgccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacgaacaaaatgtgtaaaaccatagaa 20521  T
Q  157 aagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||||||||||||||||||    
T  20522 aagtggtcaaaatttggggtatgaca 20547  T

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Target: scaffold0863 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 335 - 438
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||| |||| |||| |||||||||||||||||||||||||||    
T  335 tctctgccgaaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatg 434  T
Q  180 acag 183  Q
    ||||    
T  435 acag 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 345 - 438
Alignment:
Q  89 aaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  345 aaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 7622 - 7694
Alignment:
Q  110 aaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||| |||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||    
T  7622 aaattcctgactttaaaaaatgcaaaaaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 7694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 7547 - 7621
Alignment:
Q  9 tgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaatgagttacttcaaagtatcctctc 83  Q
    ||||||||| ||||||| ||||| ||| ||||  | |||  |||||||||||||| |||||||||||| ||||||    
T  7547 tgaaataaagagaaaataaagagagaagagagttcgactaggaataaaaaatgaggtacttcaaagtaacctctc 7621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 192622 - 192526
Alignment:
Q  88 gaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 184  Q
    |||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  |||| |||||||||||||||||||||||||||||||||||||    
T  192622 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatctgtaaaaatagagaaaagtggtcaaaatttggggtatgacagc 192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 65501 - 65604
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||| |||| ||||||||||||||  ||||||||||||||||    
T  65501 tctctgccgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgtacaaaatttggggtatg 65600  T
Q  180 acag 183  Q
    ||||    
T  65601 acag 65604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 81749 - 81852
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| || ||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||| |||| |||||||||||||||||||||||| |||||||    
T  81749 tctctgccaaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatg 81848  T
Q  180 acag 183  Q
    ||||    
T  81849 acag 81852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 518 - 415
Alignment:
Q  80 tctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 179  Q
    ||||| |||||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||| |||| | || ||||||||||||||||||| |||||||    
T  518 tctctgccgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaattaaagaaaagtggtcaaaatttagggtatg 419  T
Q  180 acag 183  Q
    ||||    
T  418 acag 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 15760 - 15837
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaatacga 133  Q
    |||||||| |||||||||||| ||| ||||||| ||||||||||||| ||| ||||||||| | ||||||||| ||||    
T  15760 aaaatgaggtacttcaaagtaacctatctaccgtaatttcgtctgaagcgacgaaaattcctggctttaaaaagacga 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 762 - 801
Alignment:
Q  136 aaaatgggtaagaatagagaaaagtggtcaaaatttgggg 175  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  762 aaaatgggtaagaatagagaaaagtggtcaaaatttgggg 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 10912 - 10974
Alignment:
Q  121 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  10912 tttaaaaatacgaataaaatttggtaaaaataga-aaaagtggtcaaaatttggggtatgacag 10974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 65589 - 65701
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaat-aaaaaatgagttacttcaaagtatcctctctaccgaaatttcgtctga 101  Q
    ||||||||||||||||| ||||| ||||| ||| || | || |||| |||| |||||||||| |||||||||||| | ||| |  |||||||||||| ||    
T  65589 aaatactgaaataaaaataaaataaagagagaaaagggtccgactcggaataaaaaaatgaggtacttcaaagtaacatctttgtcgaaatttcgtccga 65688  T
Q  102 aacgatgaaaatt 114  Q
    ||| | |||||||    
T  65689 aacaacgaaaatt 65701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 65710 - 65744
Alignment:
Q  149 atagagaaaagtggtcaaaatttggggtatgacag 183  Q
    ||||||||||||||||||||||| |||||||||||    
T  65710 atagagaaaagtggtcaaaatttagggtatgacag 65744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 10595 - 10651
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    |||||||| |||||||||||| ||||| | ||||||||||||||||| ||| |||||    
T  10595 aaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaagcgacgaaaa 10651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 11457 - 11507
Alignment:
Q  133 aataaaatgggtaagaatag-agaaaagtggtcaaaatttggggtatgaca 182  Q
    |||||||||||||||||||| | |||| |||||||||||||||||| ||||    
T  11457 aataaaatgggtaagaatagaaaaaaaatggtcaaaatttggggtacgaca 11507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 6056 - 6109
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  6056 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 59789 - 59736
Alignment:
Q  59 atgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaa 112  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  59789 atgaggtacttcaaagtatcctccctgccgaaattttgtctgaaatgattaaaa 59736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 61418 - 61288
Alignment:
Q  56 aaaatgagttacttcaaagtatcctctctaccgaaatttcgtctgaaacgatgaaaattcccgactttaaaaa---tacgaataaaa-tgggtaagaa-t 150  Q
    |||||||| |||||||||||| ||||| | | ||||||| || |||||  |||||||||   | ||| |||||   ||||||||||| || |||| || |    
T  61418 aaaatgaggtacttcaaagtaacctctatgctgaaattttgtttgaaataatgaaaatttttggcttaaaaaaaaatacgaataaaaatgagtaaaaaat 61319  T
Q  151 agagaaaagtggtcaaaatttggggtatgaca 182  Q
    ||||||| ||||||||||||||||||||||||    
T  61318 agagaaa-gtggtcaaaatttggggtatgaca 61288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 3075 - 3127
Alignment:
Q  247 gtgtgtatggtgatatagaccttgaatgtctatttagaattgctccaatctca 299  Q
    |||||| || ||||||| ||||| |||||||||||| ||||||| ||||||||    
T  3075 gtgtgtgtgatgatatataccttcaatgtctatttataattgcttcaatctca 3127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 17613 - 17669
Alignment:
Q  3 aaatactgaaataaaaagaaaatgaagagggaacagagcccaactccgaataaaaaa 59  Q
    ||||| ||||||||||||||||| ||||| ||| || |||| |||| ||||||||||    
T  17613 aaataatgaaataaaaagaaaataaagagagaagagggcccgactcggaataaaaaa 17669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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