View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8606_low_1 (Length: 601)

Name: NF8606_low_1
Description: NF8606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8606_low_1
NF8606_low_1
[»] chr7 (42 HSPs)
chr7 (17-569)||(29544636-29545189)
chr7 (30-186)||(9801704-9801859)
chr7 (17-182)||(7494813-7494977)
chr7 (33-185)||(20470640-20470792)
chr7 (53-174)||(21545668-21545789)
chr7 (17-184)||(7815440-7815606)
chr7 (30-185)||(20017082-20017237)
chr7 (17-185)||(21471913-21472079)
chr7 (17-185)||(7142215-7142382)
chr7 (17-178)||(315293-315450)
chr7 (17-154)||(23125017-23125154)
chr7 (71-186)||(10670404-10670518)
chr7 (17-168)||(22067650-22067802)
chr7 (17-185)||(2630307-2630474)
chr7 (62-184)||(18496726-18496848)
chr7 (17-184)||(1074569-1074736)
chr7 (28-171)||(7777885-7778026)
chr7 (17-132)||(30405710-30405825)
chr7 (30-118)||(9761313-9761400)
chr7 (17-159)||(9070505-9070646)
chr7 (30-152)||(24596867-24596989)
chr7 (67-123)||(12358655-12358711)
chr7 (30-149)||(4977687-4977805)
chr7 (45-174)||(20446347-20446475)
chr7 (30-150)||(20461511-20461633)
chr7 (30-157)||(22532503-22532629)
chr7 (62-178)||(7493475-7493590)
chr7 (30-152)||(3487231-3487351)
chr7 (62-137)||(5312664-5312739)
chr7 (60-150)||(7372434-7372522)
chr7 (22-152)||(8308899-8309025)
chr7 (16-159)||(10292870-10293011)
chr7 (30-126)||(3268855-3268951)
chr7 (30-184)||(2353072-2353227)
chr7 (30-152)||(4828918-4829039)
chr7 (68-126)||(14649663-14649721)
chr7 (45-127)||(46054840-46054921)
chr7 (78-126)||(10253629-10253677)
chr7 (39-93)||(1255135-1255189)
chr7 (131-184)||(9761263-9761316)
chr7 (17-105)||(9755910-9755997)
chr7 (50-152)||(25706303-25706405)
[»] chr4 (36 HSPs)
chr4 (17-186)||(15192320-15192488)
chr4 (17-185)||(47024596-47024763)
chr4 (17-186)||(18898099-18898267)
chr4 (16-186)||(27302893-27303062)
chr4 (17-185)||(34864126-34864293)
chr4 (54-213)||(51884756-51884914)
chr4 (16-186)||(5676315-5676485)
chr4 (17-175)||(17026537-17026694)
chr4 (29-186)||(12111157-12111312)
chr4 (18-178)||(25315069-25315228)
chr4 (30-185)||(5906593-5906748)
chr4 (30-176)||(31859740-31859886)
chr4 (50-178)||(1695684-1695811)
chr4 (17-181)||(10320055-10320217)
chr4 (30-152)||(23353751-23353869)
chr4 (17-152)||(19601915-19602049)
chr4 (22-152)||(13064547-13064677)
chr4 (30-176)||(33519159-33519305)
chr4 (30-150)||(17187302-17187422)
chr4 (45-151)||(7024083-7024189)
chr4 (17-153)||(9782847-9782981)
chr4 (45-183)||(26159900-26160036)
chr4 (62-152)||(22119782-22119871)
chr4 (30-119)||(9288339-9288428)
chr4 (38-122)||(17339707-17339792)
chr4 (30-152)||(29437600-29437712)
chr4 (30-152)||(21077362-21077484)
chr4 (45-126)||(46647339-46647420)
chr4 (50-126)||(10576602-10576678)
chr4 (61-126)||(32021954-32022018)
chr4 (99-147)||(4732954-4733002)
chr4 (30-126)||(13275631-13275730)
chr4 (32-102)||(18444381-18444451)
chr4 (78-124)||(53001069-53001115)
chr4 (111-144)||(20985264-20985297)
chr4 (421-453)||(29474009-29474041)
[»] chr5 (33 HSPs)
chr5 (17-192)||(11274153-11274328)
chr5 (30-179)||(26329906-26330054)
chr5 (16-191)||(22229920-22230094)
chr5 (17-178)||(16622514-16622674)
chr5 (30-178)||(30072245-30072393)
chr5 (30-184)||(17027657-17027810)
chr5 (17-175)||(25594533-25594690)
chr5 (17-192)||(24841870-24842044)
chr5 (17-186)||(25680704-25680872)
chr5 (38-150)||(18452677-18452789)
chr5 (17-178)||(16634163-16634324)
chr5 (17-184)||(24517462-24517629)
chr5 (30-184)||(26070603-26070757)
chr5 (17-186)||(12339844-12340012)
chr5 (78-152)||(19763749-19763823)
chr5 (54-150)||(7742735-7742831)
chr5 (17-164)||(17381892-17382042)
chr5 (50-152)||(18178251-18178353)
chr5 (22-124)||(20694761-20694863)
chr5 (62-152)||(23157667-23157757)
chr5 (50-152)||(24130775-24130879)
chr5 (62-150)||(19331671-19331759)
chr5 (33-151)||(11997757-11997876)
chr5 (17-152)||(18872915-18873049)
chr5 (30-115)||(24410830-24410915)
chr5 (68-184)||(17695294-17695410)
chr5 (40-147)||(22643773-22643880)
chr5 (17-127)||(25075201-25075310)
chr5 (17-127)||(25133170-25133279)
chr5 (30-144)||(25367723-25367836)
chr5 (44-142)||(4325229-4325328)
chr5 (313-346)||(7742578-7742611)
chr5 (30-142)||(18435299-18435412)
[»] chr8 (36 HSPs)
chr8 (17-186)||(16052106-16052275)
chr8 (45-186)||(11310086-11310225)
chr8 (17-186)||(24696698-24696868)
chr8 (21-186)||(28902210-28902374)
chr8 (17-186)||(16054411-16054579)
chr8 (40-175)||(28901190-28901324)
chr8 (17-135)||(28859119-28859237)
chr8 (27-178)||(24120350-24120501)
chr8 (29-152)||(28291964-28292087)
chr8 (32-175)||(14976952-14977092)
chr8 (17-150)||(32239404-32239537)
chr8 (17-152)||(12956597-12956733)
chr8 (22-152)||(5153879-5154009)
chr8 (22-152)||(29291891-29292021)
chr8 (30-178)||(22894370-22894515)
chr8 (30-137)||(13583398-13583505)
chr8 (45-152)||(30850963-30851070)
chr8 (72-174)||(5569981-5570083)
chr8 (188-346)||(28858966-28859123)
chr8 (30-152)||(11437548-11437671)
chr8 (83-186)||(13081764-13081867)
chr8 (30-152)||(30543890-30544013)
chr8 (17-144)||(14424684-14424811)
chr8 (30-149)||(6888059-6888178)
chr8 (17-152)||(27097665-27097798)
chr8 (91-161)||(23408111-23408181)
chr8 (72-152)||(31436644-31436720)
chr8 (45-151)||(28074657-28074763)
chr8 (30-126)||(13529994-13530091)
chr8 (30-126)||(13619533-13619630)
chr8 (89-186)||(29047170-29047267)
chr8 (30-126)||(35135310-35135406)
chr8 (30-126)||(28260178-28260275)
chr8 (181-233)||(12956772-12956824)
chr8 (17-90)||(24584650-24584722)
chr8 (423-459)||(8868072-8868108)
[»] chr2 (34 HSPs)
chr2 (17-186)||(27417092-27417261)
chr2 (17-179)||(30998888-30999049)
chr2 (17-154)||(21505000-21505137)
chr2 (24-152)||(1732674-1732802)
chr2 (17-185)||(1733208-1733375)
chr2 (17-161)||(16593605-16593748)
chr2 (30-184)||(18236134-18236288)
chr2 (17-185)||(35707920-35708087)
chr2 (16-149)||(24188085-24188217)
chr2 (17-184)||(25474154-25474320)
chr2 (30-151)||(17415028-17415148)
chr2 (179-311)||(9504214-9504346)
chr2 (179-311)||(9515580-9515712)
chr2 (30-152)||(18818826-18818953)
chr2 (17-139)||(22511062-22511184)
chr2 (17-126)||(17152270-17152379)
chr2 (30-144)||(14921910-14922024)
chr2 (30-156)||(19541166-19541291)
chr2 (45-145)||(31262142-31262241)
chr2 (39-126)||(24047520-24047608)
chr2 (32-176)||(34063680-34063824)
chr2 (70-151)||(17884507-17884588)
chr2 (17-139)||(32619746-32619863)
chr2 (123-175)||(19949365-19949417)
chr2 (91-150)||(22525685-22525744)
chr2 (30-152)||(17862539-17862661)
chr2 (76-150)||(31274131-31274205)
chr2 (45-121)||(15454433-15454509)
chr2 (50-126)||(21848963-21849039)
chr2 (22-82)||(27917916-27917976)
chr2 (45-176)||(39730591-39730722)
chr2 (17-161)||(15829238-15829391)
chr2 (105-139)||(19949433-19949467)
chr2 (423-464)||(35220589-35220630)
[»] chr1 (36 HSPs)
chr1 (17-178)||(11769831-11769992)
chr1 (17-178)||(23519606-23519766)
chr1 (17-186)||(26657593-26657761)
chr1 (17-147)||(25494357-25494486)
chr1 (17-185)||(30781877-30782044)
chr1 (17-174)||(25727751-25727907)
chr1 (17-174)||(25736159-25736315)
chr1 (29-161)||(18300857-18300989)
chr1 (17-161)||(23223529-23223674)
chr1 (17-186)||(25730401-25730569)
chr1 (17-162)||(30675601-30675745)
chr1 (51-186)||(50047325-50047460)
chr1 (83-188)||(12423742-12423847)
chr1 (39-176)||(26102195-26102332)
chr1 (30-152)||(26854183-26854305)
chr1 (62-176)||(52271084-52271198)
chr1 (66-178)||(9328333-9328444)
chr1 (66-182)||(9353178-9353293)
chr1 (50-152)||(19257669-19257769)
chr1 (66-179)||(9252446-9252558)
chr1 (62-151)||(25373907-25373996)
chr1 (17-126)||(31313668-31313777)
chr1 (30-152)||(15298734-15298855)
chr1 (22-126)||(27461070-27461175)
chr1 (30-122)||(15416866-15416959)
chr1 (51-152)||(25126630-25126731)
chr1 (17-168)||(23521566-23521727)
chr1 (82-152)||(23505938-23506007)
chr1 (34-110)||(34381844-34381920)
chr1 (45-126)||(18795325-18795407)
chr1 (50-122)||(31319504-31319576)
chr1 (84-184)||(25665601-25665701)
chr1 (17-76)||(8247596-8247655)
chr1 (73-152)||(21548820-21548899)
chr1 (51-152)||(18391232-18391334)
chr1 (73-126)||(15851110-15851163)
[»] chr6 (20 HSPs)
chr6 (17-175)||(30355433-30355591)
chr6 (17-185)||(15575041-15575208)
chr6 (17-185)||(17860279-17860446)
chr6 (30-150)||(26499712-26499832)
chr6 (17-152)||(24507306-24507440)
chr6 (30-139)||(33638381-33638490)
chr6 (17-160)||(15998628-15998769)
chr6 (39-126)||(9396496-9396583)
chr6 (50-184)||(16439607-16439741)
chr6 (74-140)||(33638259-33638325)
chr6 (71-135)||(24618053-24618117)
chr6 (17-150)||(16387120-16387253)
chr6 (30-152)||(9943013-9943135)
chr6 (50-151)||(14924284-14924383)
chr6 (17-147)||(22262458-22262587)
chr6 (61-126)||(32930334-32930399)
chr6 (62-150)||(26512644-26512732)
chr6 (62-150)||(26517760-26517848)
chr6 (46-109)||(12972291-12972354)
chr6 (73-142)||(23418983-23419052)
[»] chr3 (36 HSPs)
chr3 (17-152)||(19219074-19219209)
chr3 (17-150)||(19263769-19263905)
chr3 (17-186)||(10341903-10342072)
chr3 (17-186)||(16970578-16970746)
chr3 (17-184)||(25883220-25883386)
chr3 (17-142)||(25919345-25919469)
chr3 (17-186)||(27415285-27415452)
chr3 (86-186)||(11521350-11521450)
chr3 (45-178)||(1475117-1475249)
chr3 (17-186)||(18065913-18066082)
chr3 (30-152)||(19542987-19543109)
chr3 (17-186)||(33914397-33914565)
chr3 (17-186)||(12573407-12573575)
chr3 (17-186)||(13549871-13550039)
chr3 (30-157)||(23908129-23908256)
chr3 (50-152)||(18474319-18474421)
chr3 (17-134)||(28422569-28422685)
chr3 (17-137)||(11474963-11475083)
chr3 (17-185)||(21017994-21018161)
chr3 (17-152)||(5632406-5632540)
chr3 (50-152)||(21828996-21829098)
chr3 (69-184)||(2729454-2729571)
chr3 (27-152)||(8402414-8402540)
chr3 (215-335)||(19263573-19263693)
chr3 (30-142)||(26418849-26418961)
chr3 (215-335)||(19218880-19219000)
chr3 (50-126)||(25188906-25188983)
chr3 (410-470)||(1602361-1602421)
chr3 (50-186)||(13911407-13911541)
chr3 (62-148)||(30493132-30493218)
chr3 (33-100)||(33577866-33577934)
chr3 (30-88)||(26297876-26297934)
chr3 (410-470)||(1618476-1618536)
chr3 (50-137)||(26387723-26387810)
chr3 (423-459)||(9612046-9612082)
chr3 (31-75)||(26797189-26797233)
[»] scaffold0171 (3 HSPs)
scaffold0171 (17-161)||(21514-21658)
scaffold0171 (30-178)||(6325-6472)
scaffold0171 (298-349)||(21781-21832)
[»] scaffold0650 (1 HSPs)
scaffold0650 (19-185)||(5600-5765)
[»] scaffold0188 (1 HSPs)
scaffold0188 (21-175)||(26795-26949)
[»] scaffold0386 (3 HSPs)
scaffold0386 (17-186)||(8538-8707)
scaffold0386 (68-183)||(11631-11746)
scaffold0386 (17-73)||(13013-13069)
[»] scaffold0282 (1 HSPs)
scaffold0282 (50-186)||(22443-22578)
[»] scaffold0011 (1 HSPs)
scaffold0011 (17-152)||(228050-228184)
[»] scaffold0362 (1 HSPs)
scaffold0362 (81-185)||(7799-7903)
[»] scaffold0190 (1 HSPs)
scaffold0190 (30-149)||(11564-11683)
[»] scaffold0065 (1 HSPs)
scaffold0065 (17-152)||(12361-12495)
[»] scaffold0337 (1 HSPs)
scaffold0337 (17-152)||(1925-2059)
[»] scaffold1149 (1 HSPs)
scaffold1149 (70-152)||(1957-2038)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-144)||(447093-447219)
[»] scaffold0185 (1 HSPs)
scaffold0185 (85-152)||(2684-2751)
[»] scaffold0043 (1 HSPs)
scaffold0043 (53-152)||(58898-59000)
[»] scaffold1026 (1 HSPs)
scaffold1026 (111-144)||(1701-1734)
[»] scaffold0836 (1 HSPs)
scaffold0836 (111-144)||(2818-2851)


Alignment Details
Target: chr7 (Bit Score: 431; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 17 - 569
Target Start/End: Original strand, 29544636 - 29545189
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29544636 ttttttagtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggtttttgaa 29544735  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaagaattcgcacgtgaggggttgcctgat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||    
T  29544736 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcaaaaacgcaagaattcacacgtgaggggctgcctcat 29544835  T
Q  217 gcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgcaactgcgtttttctgcgggttaaagtcactctttg 316  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29544836 gcgccactgcgcatgggacagtgtttgcca-tgcctcatgcgcatcctgcacgtcagggatgcgcaactgcgtttttctgcgggttaaagtcactctttg 29544934  T
Q  317 cttgtttttcaagttggatcggtagaaaaagcccgaacatatcaggagataggatattcgttacagttccagatggagtttctcnnnnnnnctatttgtt 416  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||    
T  29544935 cttgcttttcaagttggatcggtggaaaaaacccgaacatatcaggagataggatattcattacagttccagatggagtttctctttttttctatttgtt 29545034  T
Q  417 ctcaattgatgtagtctaccaatttgaatgaatgaatgtcgttgtgttagtcaaaaaactaactcatagaatatattatcttctatacc----tatatat 512  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||    
T  29545035 ctcaattgatgtagtttaccaatttgaatgaatgaatgtcgttgtgttagtcaaaaaactaactcatagaatatattatcttctatacctatatatatat 29545134  T
Q  513 aaagggattacatgannnnnnnnnctttcaattatacccttagtttaaactattgta 569  Q
    |||||||||||||||         |||||||||||||||||||||||||||||||||    
T  29545135 aaagggattacatga--tttttttctttcaattatacccttagtttaaactattgta 29545189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 9801859 - 9801704
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||||||| ||| ||||||  |||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||| ||||||||||    
T  9801859 aatcatgtaaatcgacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatacaaagt 9801761  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    || ||||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  9801760 gaggaaaatttatttcaagttcctaggagttttcaaatggaagaacgatcgaaaacg 9801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 7494813 - 7494977
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||  | |||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||   ||||    
T  7494813 ttttgtagtgggaaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaagtt-aatggttcttagaaggtccatgaa 7494911  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaa 182  Q
    ||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||||||||    
T  7494912 gacaatacaaagtgaagaaaatttatttcaagattctaggagtttccagacggaagaacgatcgaa 7494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 20470792 - 20470640
Alignment:
Q  33 catgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaa 132  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||| |||| ||||||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  20470792 catgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttcttgaagacaatacaaaatgaa 20470693  T
Q  133 gaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||||||| ||||||||||| || |||||| ||||| |||||||||||||||||    
T  20470692 gaaaattgatttcaagttcgtatgagtttccagacagaagaacgatcgaaaac 20470640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 21545789 - 21545668
Alignment:
Q  53 gacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||| |    
T  21545789 gacatcacgtgaaggatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaataaaaagtgaagaaaattcatttcaagtttc 21545690  T
Q  153 taggagttttcagacggaagaa 174  Q
    ||||||||| |||||| |||||    
T  21545689 taggagtttccagacgaaagaa 21545668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 7815440 - 7815606
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| | ||||||||| |||| |||||  |||||||||  |||||||||||||||||  | ||||||||||||   ||   |||||||| |||||    
T  7815440 ttttgtagtgatgaatcatgtaaatcaacaaataaagacatcatgtgaaggatcaaggatataga-attgaagatcaaaagttgacagaaggttgttgaa 7815538  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7815539 gacaatacaaagtgaagaaaattcatttcaagttcataggagttttcagacggaagaacgatcgaaaa 7815606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 20017082 - 20017237
Alignment:
Q  30 aatcatgttaatcgacaaa-ccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    |||||||||  |||||||| |||||||||||  |||||||| ||| ||||||||||||||  |||||| ||||||||||||| |||||||||||||||||    
T  20017082 aatcatgtttctcgacaaatccaagacatcatgtgaaggattaagcatatgaagattgaac-tcaatggttcttagaaggttcttgaagacaatacaaag 20017180  T
Q  129 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||  ||||||||    
T  20017181 tgaagaaaattcatttcaagttcctaggagtttacaaacgaaagaacagtcgaaaac 20017237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 21471913 - 21472079
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| |||| | ||| || |||||||| ||| |||||||||||  ||||| |||||||| || | ||||||||||||| ||||    
T  21471913 ttttgtagtgaggaatcatgtaaatcaataaatcatgacatcacgtgagggatcaaggat--gaagaattgaagataaagggttcttagaaggttattga 21472010  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21472011 agaaaatacaaagtgacgaaa-ttcatttcaagttcctaggagttttcatacggaagaacgatcgaaaac 21472079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 7142215 - 7142382
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||  || ||| || |||  |||||||||||    
T  7142215 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaagattgaa-ttcgatggtttttaataggtttttgaa 7142313  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    || |||||||| | |||||||| |||| |||||||||||||  | ||||||||||||||||||||||||    
T  7142314 gagaatacaaattaaagaaaatccattgcaagttcctaggatatgtcagacggaagaacgatcgaaaac 7142382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 315293 - 315450
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||  ||||||||||| |||  ||||| ||||||| |||   ||||| ||||||| ||||    
T  315293 ttttgtagtaaggaatcatgtaaatc---aaatcaagacatcatgtgaaggatcaaagat--gaagagttgaagaacaacagttctttgaaggttgttga 315387  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  315388 agacaatacaaagtgaataaaattcatttcaagttcctaggagtttccagacgaaagaacgat 315450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 23125017 - 23125154
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||||||| || ||||||||||  ||||||||| |||||||||||||||||| |||||| |||||| ||| || || ||    
T  23125017 ttttctagtgagaaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattcttaaa 23125116  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttccta 154  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  23125117 gacaatacaaagtgaagaaaattcatttcaaattccta 23125154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 10670518 - 10670404
Alignment:
Q  71 aaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgga 170  Q
    |||||||||||||| |||| |||||| |||||||||||||||  |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  10670518 aaggatatgaagatcgaag-tcaatggttcttagaaggttttctaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagttttcagacgga 10670420  T
Q  171 agaacgatcgaaaacg 186  Q
    ||| ||| | ||||||    
T  10670419 agatcgaccaaaaacg 10670404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 22067802 - 22067650
Alignment:
Q  17 ttttgtagtaaggaatcat--gttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggttttt 113  Q
    ||||||||| |||||||||  || ||||  |||| ||||||||||  |||||||||||||||  ||| | ||||| ||||| | ||||||||||||| ||    
T  22067802 ttttgtagtgaggaatcatatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaacaattgaaaatcaagggttcttagaaggttgtt 22067705  T
Q  114 gaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacg 168  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  22067704 gaagacaatacaaagtgaaaagaattcatttcaagttcctaggagtttttagacg 22067650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 2630474 - 2630307
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||  ||||| |||||||||  ||||| ||||||||||| | ||||||   |||| || |    
T  2630474 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggat--gaagaattgaagatcaagggttcttaattggttgttaa 2630377  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    |||||||| ||| |||||| |||| |||||||||||||||||||||||||  | ||||||||||||||||    
T  2630376 agacaataaaaattgaagacaattaatttcaagttcctaggagttttcaggagaaagaacgatcgaaaac 2630307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 18496726 - 18496848
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    |||||||||||||||||||||||||||||  |||| ||||||||| ||| ||||||| |||||||  |||||||||||||||||||||||| |||  |||    
T  18496726 tgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaagaaaatacaagatgaagaaaattcatttcaagttccaaggcattt 18496825  T
Q  162 tcagacggaagaacgatcgaaaa 184  Q
      ||||| ||||||| |||||||    
T  18496826 caagacgtaagaacggtcgaaaa 18496848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 1074569 - 1074736
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||| |  ||| ||||||||||  | |||||||||||||||||| |||||||| ||||| |||||| |||||| |||||    
T  1074569 ttttttagtgagaaatcatgtaaattggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaa 1074668  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||||||||||  ||||||||| | |||||||||||| ||   |||  ||||||||||||||| |||||    
T  1074669 gacaatacaagatgaagaaaagtaatttcaagttccaagacatttcaagacggaagaacgatagaaaa 1074736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 7778026 - 7777885
Alignment:
Q  28 ggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaa 127  Q
    |||||||||| |||| ||||| ||||||||||| ||||||||||| |||||||| |||||| |  |||| |||||| |||||| |||| ||||||| |||    
T  7778026 ggaatcatgtaaatcaacaaagcaagacatcacgtgaaggatcaacgatatgaa-attgaaaactaatg-ttcttaaaaggttgttgaggacaatataaa 7777929  T
Q  128 gtgaagaaaattcatttcaagttcctaggagttttcagacggaa 171  Q
    |||||||||| ||||  |||||||||| ||||||| ||||||||    
T  7777928 gtgaagaaaaatcataccaagttcctaagagtttttagacggaa 7777885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 30405710 - 30405825
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||||| ||||  |||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  30405710 ttttttagtgagaaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaa 30405809  T
Q  117 gacaatacaaagtgaa 132  Q
     |||||||||||||||    
T  30405810 tacaatacaaagtgaa 30405825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 9761400 - 9761313
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaaga 118  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||    
T  9761400 aatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 9070505 - 9070646
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||| ||| || |||||||| ||| ||| ||  |||||||| | |||||||||||||||||||| || ||| |||||   |||||||||||||||| ||    
T  9070505 ttttgaagtgagaaatcatgtaaattgacgaataaagacatcgcgtgaaggatcaaggatatgaatatcgaa-atcaagtgttcttagaaggttttttaa 9070603  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagt 159  Q
    ||||||| ||||||||||| ||||| ||||||||| |||||||    
T  9070604 gacaatataaagtgaagaatattcagttcaagttcgtaggagt 9070646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 24596989 - 24596867
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||| ||| ||||| |||| ||||||||||| || | |||| ||||||| |||||||||| ||| || ||| ||||||   |||||||||||||||||||    
T  24596989 aatcgtgtaaatcggcaaaacaagacatcacgtggaagatcgaggatataaagattgaagttcagtggttcatagaagaaatttgaagacaatacaaagt 24596890  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||| |||||||    
T  24596889 gaagaaaattcatttgaagttcc 24596867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 12358711 - 12358655
Alignment:
Q  67 gatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaata 123  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12358711 gatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 4977805 - 4977687
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||  ||||| ||||||||||||||||||||| ||||||||||||||||||  | ||| || |||||||  ||||||||| |||||||| |    
T  4977805 aatcatgtaaatatacaaatcaagacatcacatgaaggatcgaggatatgaagattgaag-gctatggtttttagaagacttttgaagaaaatacaaaat 4977707  T
Q  130 gaagaaaattcatttcaagt 149  Q
    ||| ||||||||||| ||||    
T  4977706 gaacaaaattcatttgaagt 4977687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 20446347 - 20446475
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatt 143  Q
    |||| ||||||||||  ||||||||||| |||  ||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||| |||||    
T  20446347 caaatcaagacatcaagtgaaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaaaaaaaatcatt 20446444  T
Q  144 tcaagttcctaggagttttcagacggaagaa 174  Q
    | |||||| || |||| |||| | |||||||    
T  20446445 ttaagttcataagagtattcaaatggaagaa 20446475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 20461633 - 20461511
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga--agacaatacaaa 127  Q
    |||||||| ||||| ||||  |||||||||  ||||||||||||||||||||||||||||| ||  |||||||  ||||| ||| |  ||||||||||||    
T  20461633 aatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaagaccaccgattcttgcaaggtattttaagagacaatacaaa 20461534  T
Q  128 gtgaagaaaattcatttcaagtt 150  Q
    |||||| |||||| |||||||||    
T  20461533 gtgaagtaaattcctttcaagtt 20461511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 22532629 - 22532503
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| ||||| |||||||||||||| ||||| |||||| ||||| |||| ||||||| ||||||||| ||||||||||||||| |||  |    
T  22532629 aatcatgtaaatcggcaaac-aagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaatccaagtt 22532531  T
Q  130 gaagaaaattcatttcaagttcctagga 157  Q
       |||||||||| ||||||||| ||||    
T  22532530 atggaaaattcatctcaagttccaagga 22532503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 62 - 178
Target Start/End: Original strand, 7493475 - 7493590
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    |||||| ||||| ||||| | |||||||||||| | |||||| |||||| ||||||| |||||||| |||| |||||||||| ||| || ||||||||||    
T  7493475 tgaaggttcaagaatatgga-attgaagatcaagggttcttaaaaggttattgaagataatacaaaatgaaaaaaattcattccaaatttctaggagttt 7493573  T
Q  162 tcagacggaagaacgat 178  Q
    ||| | |||||||||||    
T  7493574 tcaaagggaagaacgat 7493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 3487351 - 3487231
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| |||| |||||||||| |||||||||||| ||||| ||||| ||| ||||| || ||| |||||   ||| |||||||||||||||    
T  3487351 aatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaatgatataaagatcgaacatcaacgactctcagaagacattttaagacaatacaaagt 3487252  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||||  ||||||||| |||||||    
T  3487251 gaag--aattcatttgaagttcc 3487231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 5312739 - 5312664
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaa 137  Q
    ||||||||||||||||||| ||||||| || |||| |||||||||| ||||||||||||||||||  |||||||||    
T  5312739 tgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaatacaagatgaagaaaa 5312664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 7372522 - 7372434
Alignment:
Q  60 catgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    ||||||||||||||||||| ||| | |||| ||||||| ||||||||| ||||| |||||||||| |||||||||||||| ||||||||||    
T  7372522 catgaaggatcaaggatataaagctggaagttcaatga-tcttagaagatttttaaagacaatac-aagtgaagaaaatttatttcaagtt 7372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 8309025 - 8308899
Alignment:
Q  22 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 121  Q
    ||||||| |||||||| ||||  |||| ||||||||||| ||||| ||||||| ||||     || | ||||||| |||||||||||| |||||||||||    
T  8309025 tagtaagaaatcatgtaaatcagcaaaacaagacatcacgtgaagaatcaaggttatgg----tggaaatcaatggttcttagaaggtctttgaagacaa 8308930  T
Q  122 tacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||| | ||||| |||||| |||||||||    
T  8308929 tacaaaataaagaagattcatatcaagttcc 8308899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 10292870 - 10293011
Alignment:
Q  16 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttg 114  Q
    |||||||||| ||||||||||| ||||  |||| ||||||||||  |||||||| ||||  |||||| | |||||||||| | |||||||||||| ||||    
T  10292870 attttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaaggataaagg--atgaagaactgaagatcaagggttcttagaaggtgtttg 10292967  T
Q  115 aagacaatacaaagtgaagaaaattcatttcaagttcctaggagt 159  Q
    || |||||| |||| ||||||||   |||| ||||||||||||||    
T  10292968 aatacaataaaaagggaagaaaa-caatttaaagttcctaggagt 10293011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 3268951 - 3268855
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||| ||||| |||| ||||| |||||||||||||||||| ||||||||| |||| || ||||||||||| ||| |||||  | |||||||||    
T  3268951 aatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattcttaaaagctttttataaacaatacaa 3268855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 2353227 - 2353072
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaa-ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||| |||| |||| | |||||||||||| || ||||||||| |||  ||||||||||       
T  2353227 aatcatgtaaatcgacaaagcaagacatctcatgatggatcaatggatgtgaaaaatgaagatcaatggttattagaaggtgtttatagacaatacatga 2353128  T
Q  129 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    |||  ||||||||| ||||||||  |||  |||  |||||||||| || |||||||    
T  2353127 tgagaaaaattcatctcaagttctaaggcttttcaagacggaagatcgctcgaaaa 2353072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 4828918 - 4829039
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    ||||||||  ||||| ||| ||||| || ||| || ||||| |||||| |||||   ||  |||||||| |||||||| | |||||||||||||||||||    
T  4828918 aatcatgtagatcgaaaaaacaagatattacacgacggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagt 4829016  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||||| |||||||||||||||||    
T  4829017 gaagataattcatttcaagttcc 4829039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 14649663 - 14649721
Alignment:
Q  68 atcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||    
T  14649663 atcaaggatatgaataatgaagatcaatggttattagaaggtttttgaagacaatacaa 14649721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 46054840 - 46054921
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaa 127  Q
    |||| |||||| |||||| |||||| || |||||||||||||||||| ||||| ||||| || ||| ||||||||||||||||    
T  46054840 caaaacaagacgtcacataaaggattaaagatatgaagattgaagattaatga-tcttacaaagttgttgaagacaatacaaa 46054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 10253677 - 10253629
Alignment:
Q  78 tgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  10253677 tgaagattgaagatcaatgatacttatagggtttttgaagacaatacaa 10253629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 1255189 - 1255135
Alignment:
Q  39 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatca 93  Q
    |||| ||||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  1255189 aatcaacaaatcaaaacatcacatgaaggatcaaggatacgaagaatgaagatca 1255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 9761316 - 9761263
Alignment:
Q  131 aagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||||||||||||||||||||||||||||||| || |  |||||| |||||||||    
T  9761316 aagaaaattcatttcaagttcctaggagtttccaaatagaagaatgatcgaaaa 9761263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 9755910 - 9755997
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttaga 105  Q
    |||| |||| || |||||||  |||||||||| | ||||||||  ||||||||||| |||||||||||| |||| |||||||| |||||    
T  9755910 ttttctagtgagaaatcatgcaaatcgacaaatctagacatcatgtgaaggatcaacgatatgaagattaaaga-caatgatttttaga 9755997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 25706303 - 25706405
Alignment:
Q  50 caagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaag 148  Q
    ||||||| | ||||||||||||||| || | |||| |||||| ||||| ||||| |||||||||||||||||||| ||  ||  ||||||||||  ||||    
T  25706303 caagacacctcatgaaggatcaagggatttaaagagtgaaga-caatggttcttggaaggtttttgaagacaatataagttggggaaaattcatcccaag 25706401  T
Q  149 ttcc 152  Q
    ||||    
T  25706402 ttcc 25706405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 3e-62; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 15192320 - 15192488
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  15192320 ttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcttagaaggttgttgaa 15192418  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15192419 gacaattcaaagtgaagacaattcatttcaagttcctaggagtttttagacggaagaacgatcgaaaacg 15192488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 47024763 - 47024596
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||| ||| ||||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  47024763 ttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaa 47024665  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
     ||| ||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  47024664 aacagtacaaagtgaagagaatttatttcaagttcctaggagttttcagatggaagaacgatcgaaaac 47024596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 18898099 - 18898267
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||||||| ||| |||| ||||||||| ||| || |||||| ||||||||||||    
T  18898099 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatccagggtatgcagattgaag-tcagtggttcttaaaaggtttttgaa 18898197  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
     |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  18898198 tacaatacaaagtaaagaaaattcatttcaagttcctaggatttttcagacgtaagaacgatcgaaaacg 18898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 27302893 - 27303062
Alignment:
Q  16 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 115  Q
    |||||||||| | ||||||||| ||||||||||  |||||||||| || | ||||||||||||||| |||||| || || | ||||||||||||||||||    
T  27302893 attttgtagtgatgaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttga 27302991  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27302992 agacattataaagtgaagaaaattcattttaagttcctaggagttttcagacggaagaacgatcgaaaacg 27303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 34864293 - 34864126
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||||||||||| ||||||||||| |||||| ||||||||| |||||| ||||||||||||||||| |    
T  34864293 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatggagattgaag-tcaatggttcttagaaggtttttgta 34864195  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||| |||| || ||||||||||    
T  34864194 gacaatacaaaatgaagaaaattcatttaaagttcctagaagttttcagatggaaaaatgatcgaaaac 34864126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 51884756 - 51884914
Alignment:
Q  54 acatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcct 153  Q
    ||||||||||||||||||| |||||||| |||||||||||| |  ||||||||| || ||||| |||||||||||||||||||||| |||||||||||||    
T  51884756 acatcacatgaaggatcaaagatatgaa-attgaagatcaagggctcttagaagattgttgaatacaatacaaagtgaagaaaattaatttcaagttcct 51884854  T
Q  154 aggagttttcagacggaagaacgatcgaaaacgcaagaattcgcacgtgaggggttgcct 213  Q
    | ||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||    
T  51884855 atgagttttcagacggaagaacgatcgaaaacgcaagaaatcgtaccggaggggttgcct 51884914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 5676315 - 5676485
Alignment:
Q  16 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 115  Q
    ||||| |||| | ||||||||| ||| || ||| ||||||||||||||||||||||||||||| ||| ||||| |  |||||||||||||||||||||||    
T  5676315 attttttagtgatgaatcatgtaaattgataaatcaagacatcacatgaaggatcaaggatattaagtttgaatacaaatgattcttagaaggtttttga 5676414  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||||  ||||||||||||||||| |||| ||||||||||  |||||||||||| ||||||||||    
T  5676415 agacaatacaagatgaagaaaattcatttcgagttactaggagtttctagacggaagaacaatcgaaaacg 5676485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 17026694 - 17026537
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| |  |||||||| ||||||||||  ||||||||||||||||||||||| ||||||  ||| ||| | |||| |||||| || |||||||||    
T  17026694 ttttgtagtcataaatcatgtaaatcgacaaattaagacatcacatgaaggatcaagtatatgagaatttaagtt-aatggttcttaaaaagtttttgaa 17026596  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 175  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  17026595 gacaatacaaagtgaagaaaattaatttcaagttcctaggagtttccagacggaagaac 17026537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 12111312 - 12111157
Alignment:
Q  29 gaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    ||||| ||| |||||||||| |||| |||||| |||||||||||| ||||||| ||||||| |||||| |||||| ||||||||| |||| |||||||||    
T  12111312 gaatcttgtaaatcgacaaatcaagtcatcacgtgaaggatcaag-atatgaatattgaag-tcaatggttcttataaggttttttaagataatacaaag 12111215  T
Q  129 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  12111214 tgaagaaaattcatttcaagtttctaggagttttcaaacagaagaatgatcgaaaacg 12111157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 25315228 - 25315069
Alignment:
Q  18 tttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaag 117  Q
    |||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||| || ||| ||||||    
T  25315228 tttgtagtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaatgttgttgaag 25315130  T
Q  118 acaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    |||||||||  | ||| |||||||||||||||||||| |||||| || |||||||||||||    
T  25315129 acaatacaagataaagtaaattcatttcaagttcctaagagtttccatacggaagaacgat 25315069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 5906748 - 5906593
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| || ||||||||||||| ||||||||||||||| || |||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||    
T  5906748 aatcatgtaaaccgacaaaccaagatatcacatgaaggatctagaatattaagatttaagattaatggttcttagaaggtttttgaagataatacaaagt 5906649  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
     ||||||||||||||||| ||| ||  | ||| ||||| |||||||||||||||||    
T  5906648 taagaaaattcatttcaaattcataaaaatttccagacagaagaacgatcgaaaac 5906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 31859886 - 31859740
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||  |||| ||||||| ||  ||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  31859886 aatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggatatgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagt 31859787  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacg 176  Q
    |||||||||| |||||||||||| |||  |||  |||||||||||||    
T  31859786 gaagaaaatttatttcaagttccaaggcatttcaagacggaagaacg 31859740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 1695811 - 1695684
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    ||||||||||  |||| |||||| ||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  1695811 caagacatcatgtgaatgatcaacgatatgaagattgaa-ataaaacattcttagaaggttgttgaagacaatacaaagtgaataaaattcatttcaagt 1695713  T
Q  150 tcctaggagttttcagacggaagaacgat 178  Q
    |||||||||||| || ||| |||||||||    
T  1695712 tcctaggagtttacaaacgaaagaacgat 1695684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 10320217 - 10320055
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || ||||| || ||| |||||| || ||||| |||||||||||||||||| |||| ||||||| | |||| || ||||||||| || |||    
T  10320217 ttttgtagtgagaaatcaggtaaattgacaaatca-gacataacatgaaggatcaaggatgtgaaaattgaagtt-aatggttgttagaaggtcttcgaa 10320120  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcga 181  Q
     |||||||||||||||||||||| ||||||||||||||||||||| |||| || |||||||||||    
T  10320119 aacaatacaaagtgaagaaaatttatttcaagttcctaggagtttccagaaggtagaacgatcga 10320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 23353751 - 23353869
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||  ||   ||||||| ||| |||||||||||||||    
T  23353751 aatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaatagtt---agaaggtcttttaagacaatacaaagt 23353846  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    |||||||||||||||||||||||    
T  23353847 gaagaaaattcatttcaagttcc 23353869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 19601915 - 19602049
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| |||| ||||| ||||||||||| |||| |||| ||||||||| ||||||||| ||||| |||||| ||||||||||||    
T  19601915 ttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcgaggatatgatgattgaaga-caatggttcttaaaaggtttttgaa 19602013  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||| |||||| ||||||||||||||| |||||    
T  19602014 gacaataaaaagtggagaaaattcatttcatgttcc 19602049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 13064547 - 13064677
Alignment:
Q  22 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 121  Q
    ||||||| |||||||| ||| | |||| ||||||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||| |||||||||||    
T  13064547 tagtaagaaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttcttagagggtatttgaagacaa 13064646  T
Q  122 tacaaagtgaagaaaattcatttcaagttcc 152  Q
    | ||||||||| ||| || ||||||||||||    
T  13064647 ttcaaagtgaacaaatttgatttcaagttcc 13064677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 33519159 - 33519305
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| |||| ||| ||||| | ||||| ||  ||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||  |    
T  33519159 aatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggatatgacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaagtt 33519258  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacg 176  Q
    |||||||||||||||||| |||| |||  ||| ||||| ||||||||    
T  33519259 gaagaaaattcatttcaaattccaaggcatttccagacagaagaacg 33519305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 17187302 - 17187422
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||||||||  || ||||||  |||| |||  |||||||||||||||||| ||| || |||||||||| | |||||||||||||||||||    
T  17187302 aatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggatatgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaagt 17187401  T
Q  130 gaagaaaattcatttcaagtt 150  Q
     ||||||||||||||||||||    
T  17187402 aaagaaaattcatttcaagtt 17187422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 7024189 - 7024083
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 144  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||| || ||||||| |||||||  |||||||||||||| |    
T  7024189 caaaacaagacatcacgtgaaggatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaagataatacaagatgaagaaaattcatat 7024090  T
Q  145 caagttc 151  Q
     ||||||    
T  7024089 aaagttc 7024083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 9782981 - 9782847
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| |||| ||||| ||||||||||  || |||||||| |||  ||||| ||||||||||| | ||||||||||||| || |    
T  9782981 ttttgtagtgaggaatcatgtaaatcaacaaatcaagacatcatgtggaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttaa 9782884  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcct 153  Q
    | | ||| ||||||||||||||||||||||||||||||    
T  9782883 aaa-aatgcaaagtgaagaaaattcatttcaagttcct 9782847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 26159900 - 26160036
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 144  Q
    |||| ||||||||||  ||||||||  ||||||||||||||||||||||||| |||||| ||||| ||||||  ||| | ||  ||||||||||||||||    
T  26159900 caaaacaagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaaatcaa-ataagttgaagaaaattcattt 26159998  T
Q  145 caagttcctaggagttttcagacggaagaacgatcgaaa 183  Q
    |||||||| |||| |||  ||||||||||||| ||||||    
T  26159999 caagttccaagga-tttcaagacggaagaacgctcgaaa 26160036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 22119782 - 22119871
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||| ||||||| |||||| | |||||| ||||||||||||    
T  22119782 tgaaggattaaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaata-aaagtgtacaaaattaatttcaagttcc 22119871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 9288339 - 9288428
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagac 119  Q
    |||||||| ||||| |||| ||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||| ||||| || |||||    
T  9288339 aatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttcttagcaggttgttaaagac 9288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 17339792 - 17339707
Alignment:
Q  38 taatcgacaaaccaagacatcacatgaaggatcaag-gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 122  Q
    ||||||||||| ||||| |||||||||||||||||| |||||| ||| ||||||||| ||||||||| ||| ||||||||||||||    
T  17339792 taatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaat 17339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 29437600 - 29437712
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| |||  ||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||          ||||||||||||||||    
T  29437600 aatcatgtaaatcggcaagacaagacatcacgtgaaggatcgaggatatgaagattgaagttcaatggttctta----------gaagacaatacaaagt 29437689  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||||||| ||||||| |||||||    
T  29437690 gaagaaacttcatttgaagttcc 29437712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 21077362 - 21077484
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||| | |||| ||||||| ||  || |||||| | | ||||| ||||||| ||||||| ||||||||||||  | |||||||||||||| |    
T  21077362 aatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagttatgaggattgaatatcaatggttcttagaaggtaatcgaagacaatacaaatt 21077461  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||| |||||||||||||||||||    
T  21077462 gaataaaattcatttcaagttcc 21077484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 46647339 - 46647420
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||| ||||||||||| ||| ||||||| |||||||| | |||||||||||| |||||| ||||||||| |||| |||||||    
T  46647339 caaaacaagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaagataatacaa 46647420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 10576602 - 10576678
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||||||||  ||||||||| |||||||||||| | |||| | |||||| ||||||||||||||||| ||| ||||    
T  10576602 caagacatcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaaggcaacacaa 10576678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 32021954 - 32022018
Alignment:
Q  61 atgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||||||||||| ||||||||| |||||||||||| |||  | |||| |||||||||||||||||    
T  32021954 atgaaggatcaagtatatgaagaatgaagatcaatggttccaaaaagg-ttttgaagacaatacaa 32022018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 4732954 - 4733002
Alignment:
Q  99 tcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaa 147  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  4732954 tcttagaaggtctttaaagacaatacaagttgaagaaaattcatttcaa 4733002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 13275730 - 13275631
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagat--tgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||| | ||| |||| ||| ||| |||| ||||||| |||| ||||||| ||  |||||||||||| ||||| |||| ||||||||||||||||||    
T  13275730 aatcatgtaattcggcaaagcaatacaccacacgaaggattaagggatatgaatataatgaagatcaatggttctttgaagttttttgaagacaatacaa 13275631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 18444381 - 18444451
Alignment:
Q  32 tcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattctt 102  Q
    |||||| ||||  |||| ||||||||||| ||||||||| | ||||  ||||||||||||||||| |||||    
T  18444381 tcatgtaaatctgcaaaacaagacatcacgtgaaggatcgatgatacaaagattgaagatcaatggttctt 18444451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 53001115 - 53001069
Alignment:
Q  78 tgaagattgaagatcaatgattcttagaaggtttttgaagacaatac 124  Q
    |||||| || ||||||||||| ||||||||| |||||||||||||||    
T  53001115 tgaagaatggagatcaatgatacttagaaggcttttgaagacaatac 53001069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 20985297 - 20985264
Alignment:
Q  111 tttgaagacaatacaaagtgaagaaaattcattt 144  Q
    ||||||||||||||||||||||||||| ||||||    
T  20985297 tttgaagacaatacaaagtgaagaaaactcattt 20985264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 29474041 - 29474009
Alignment:
Q  421 attgatgtagtctaccaatttgaatgaatgaat 453  Q
    ||||||||| |||||||||||||||||||||||    
T  29474041 attgatgtactctaccaatttgaatgaatgaat 29474009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 1e-58; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 11274328 - 11274153
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  11274328 ttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaaggatatgaagattgaagaccaatggttcttagaaggtctttgaa 11274229  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaagaa 192  Q
    ||||||||||  ||| |||| |||||||||||||||||||||||||||  |||||||||||| |||||| ||||||    
T  11274228 gacaatacaagatgatgaaatttcatttcaagttcctaggagttttcatgcggaagaacgattgaaaacacaagaa 11274153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 26330054 - 26329906
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||| |||||||||||||||    
T  26330054 aatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-tcaatggtccttagaaggttttttaagacaatacaaagt 26329956  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26329955 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatc 26329906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 22229920 - 22230094
Alignment:
Q  16 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 115  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| | |||||||||||| | ||||||||||||| ||||    
T  22229920 attttgtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttcttagaaggttgttga 22230018  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaaga 191  Q
    ||| ||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22230019 agataataccaagtgaagaaaacacatctcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaaga 22230094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 16622674 - 16622514
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||| ||| || |||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||| || || ||||||||||| |||||||    
T  16622674 ttttgcagtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttagaagg-ttttgaa 16622576  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  16622575 gacaatacaaattgaagaaaattcatttcaagttcgtaggagtttccagatggaagaacgat 16622514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 30 - 178
Target Start/End: Original strand, 30072245 - 30072393
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||    
T  30072245 aatcatattaatcgacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttcttaaaaggtttttaaagacaatacaaagt 30072344  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    ||||||| |||||||||||||| || | |||| || |||||||||||||    
T  30072345 gaagaaatttcatttcaagttcgtatgcgtttccaaacggaagaacgat 30072393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 17027657 - 17027810
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||| ||| ||||||||||| || | |||||| |||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||    
T  17027657 aatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaagtt-aatgcttcttagaaggttcttgaagacaatacaaagt 17027755  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    |||||||||| ||||||| ||||||||||||| || ||| |||||||||||||||    
T  17027756 gaagaaaattaatttcaatttcctaggagtttccatacgaaagaacgatcgaaaa 17027810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 25594690 - 25594533
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| |||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||  | |||||||||||||| |    
T  25594690 ttttatagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggtttttgta 25594591  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 175  Q
    || ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25594590 gataatgcaaagtgaagaaaattca-ttcaagttcctaggagtttccagacggaagaac 25594533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 24841870 - 24842044
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| ||| || ||| ||||||| ||| ||||||||||||||||||  |||||||| |||||| ||||||||||| |||||||    
T  24841870 ttttgtagtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaaggattttgaa 24841968  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaagaa 192  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||| ||||||  ||||||||  |||||| |||||    
T  24841969 gacaacacaaaatgaagaaaattcatttcatgttcctaggagtttccagacgacagaacgataaaaaacggaagaa 24842044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 25680704 - 25680872
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||||| | |||||| |||||||||||||||| ||||  |||||||||||||||| ||| ||| |||  ||||  ||||||||||||||| |||    
T  25680704 ttttgtagtaagaattcatgtaaatcgacaaaccaagaaatcatgtgaaggatcaaggataagaa-atttaaggccaatagttcttagaaggttttagaa 25680802  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
     |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||    
T  25680803 aacaatacaaagtaaagaaaattcatttcaggtttctaggagtttccagacggaaaaacaatcgaaaacg 25680872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 18452789 - 18452677
Alignment:
Q  38 taatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaa 137  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  18452789 taatcgacaaatcaagacatcacatgagggatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaatacaaagtgaagaaaa 18452690  T
Q  138 ttcatttcaagtt 150  Q
    |||||||||||||    
T  18452689 ttcatttcaagtt 18452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 16634163 - 16634324
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||| ||| || |||||| | |||||||||| ||||||||||| ||||||| |||  |||||||| ||||||| ||||| |||||||||||||||||||    
T  16634163 ttttgcagtgagaaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaaggtttttgaa 16634262  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    || |||||||  |||| ||||||||||||||||| | |  ||||||||| ||||||||||||    
T  16634263 gaaaatacaagatgaaaaaaattcatttcaagtttccaatagttttcaggcggaagaacgat 16634324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 24517462 - 24517629
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||| |||| |||||||| |||||  ||| ||| ||||||| ||||||||||||||||  ||||||| ||| ||||| || | | ||||||||| ||    
T  24517462 ttttgtaataagaaatcatgtaaatcggtaaatcaatacatcacgtgaaggatcaaggatacaaagattgcagaccaatggttatcataaggttttttaa 24517561  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    || |||| |||| |||||||||||||||||||||||||||||||| |||| | || ||||||||||||    
T  24517562 gataatagaaagcgaagaaaattcatttcaagttcctaggagtttccagatgaaataacgatcgaaaa 24517629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 26070603 - 26070757
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||||||||||||| |||  |    
T  26070603 aatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaagattgaagatctatggttcgtataaggtttttgaagacaatgcaagtt 26070702  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
      |||||||||| |||||||||| |||  |||  ||||||||||| | |||||||    
T  26070703 agagaaaattcagttcaagttccaaggcatttcaagacggaagaaggctcgaaaa 26070757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 12340012 - 12339844
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||||||||||||| | |||| ||||| ||||||||||| |||||||||||||  |||||| |||||| ||||| | ||||||||||||  ||||    
T  12340012 ttttgtagtaaggaatcatataaatcaacaaatcaagacatcacgtgaaggatcaagg--atgaagaattgaaaatcaagggttcttagaaggtcgttga 12339915  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||||||||||||||||  || |||| ||||| |||  ||||  |||||||||  |||||| ||||||||||    
T  12339914 agacaatacaaagtgagaaacattcgtttcatgtttataggcattttcagacaaaagaacaatcgaaaacg 12339844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 19763823 - 19763749
Alignment:
Q  78 tgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19763823 tgaagattgaagatcaagggttcttagaaggtttttgaagataatacaaagtgaagaaaattcatttcaagttcc 19763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 7742831 - 7742735
Alignment:
Q  54 acatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    ||||||| ||||| ||| | |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  7742831 acatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaatacaaagtgaagaaaaatcgtttcaagtt 7742735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 17382042 - 17381892
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| ||||| |||| |||||||| |  ||||||||||||||||||||| ||||||| ||||| ||||||||  ||||||  |    
T  17382042 ttttgtagtgagaaatcatgtaaatcgtcaaatcaagacataatgtgaaggatcaaggatatgaagtttgaagaccaatggttcttagattgtttttcga 17381943  T
Q  117 gac---aatacaaagtgaagaaaattcatttcaagttcctaggagttttca 164  Q
    |||   |||||||  |||||||| |||||||||||||||||| ||||||||    
T  17381942 gacattaatacaagatgaagaaagttcatttcaagttcctagaagttttca 17381892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 18178251 - 18178353
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    ||||||| | ||||||||||| ||||||||||||||||||| ||||  ||||| |||||| |||||||| |||||||| |||| ||||||||| ||||||    
T  18178251 caagacaccgcatgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaagataatacaaattgaataaaattcatctcaagt 18178350  T
Q  150 tcc 152  Q
    |||    
T  18178351 tcc 18178353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 20694761 - 20694863
Alignment:
Q  22 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 121  Q
    ||||||| |||||||| ||||| |||| |||||||||| ||||||||| | ||| || |||||||||||| |||| |||||||||||| |||||||||||    
T  20694761 tagtaagaaatcatgtaaatcggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaa 20694860  T
Q  122 tac 124  Q
    |||    
T  20694861 tac 20694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 23157757 - 23157667
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||||| |||||||| |||||||||| |||||| |||||| ||||| ||| ||||||| | |||||||||||| ||||||| |||||||    
T  23157757 tgaaggataaaggatattaagattgaagttcaatggttcttataaggtatttaaagacaacagaaagtgaagaaagttcatttaaagttcc 23157667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 24130775 - 24130879
Alignment:
Q  50 caagacatcacatgaaggatca--aggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaa 147  Q
    |||||||||||||||||||| |  |||||||||||| | || |||||||  |||||||||||||||||| |||||||||| ||  ||||||||||  |||    
T  24130775 caagacatcacatgaaggattataaggatatgaagaataaatatcaatggatcttagaaggtttttgaatacaatacaaattggggaaaattcatcccaa 24130874  T
Q  148 gttcc 152  Q
    |||||    
T  24130875 gttcc 24130879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 19331671 - 19331759
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||   |||||||||||||||| ||||||| || |||||| |||||    
T  19331671 tgaaggatcgaggatatgaagattgaaattcaatgatttttagaagacatttgaagacaatacaatgtgaagataagtcatttgaagtt 19331759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 11997876 - 11997757
Alignment:
Q  33 catgttaatcgacaaaccaagacatcacatgaaggatcaag-gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtga 131  Q
    ||||| ||||| || | |||||||||  || |||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||| |||||||  ||     
T  11997876 catgtaaatcggcagagcaagacatcttattaaggatcaagagatatgaagaatgaagatcaatgatttttagaaggtttttaaagataatacaagttgg 11997777  T
Q  132 agaaaattcatttcaagttc 151  Q
    | |||||||||  |||||||    
T  11997776 aaaaaattcatcccaagttc 11997757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 18873049 - 18872915
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||  | ||| |||| || ||| ||| ||||||||||  | ||||||  ||||||||||||| |||| ||||||| | ||||| |||  |||||    
T  18873049 ttttgtagtgtgaaattatgtaaaacgataaatcaagacatcatgtaaaggatggaggatatgaagatggaagttcaatgagt-ttagacggtagttgaa 18872951  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||| |||||||||||||||| |||||||    
T  18872950 gacaatacaaattgaagaaaattcatttgaagttcc 18872915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 24410915 - 24410830
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 115  Q
    |||||||| ||| | ||||  |||||||||||||||||||| ||||| |||||||| |||||||||| |||||| ||||| |||||    
T  24410915 aatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttcttataaggtatttga 24410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 17695410 - 17695294
Alignment:
Q  68 atcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagac 167  Q
    ||||||| |||||| | |||||||||||| || ||||||||||||||||||||||||||  ||  ||||||||||   ||||||| |||  |||  ||||    
T  17695410 atcaaggttatgaataatgaagatcaatggttattagaaggtttttgaagacaatacaagttggggaaaattcatcctaagttccaaggcatttcaagac 17695311  T
Q  168 ggaagaacgatcgaaaa 184  Q
     |||||||| |||||||    
T  17695310 cgaagaacgctcgaaaa 17695294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 22643880 - 22643773
Alignment:
Q  40 atcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaatt 139  Q
    |||| |||| ||||||| ||  || |||||| ||| ||| |||||| || |||| || |||||| ||||| |||||| |||||||||| |||||||||||    
T  22643880 atcggcaaaacaagacaccaagtggaggatcgagggtataaagattaaatatcagtggttcttaaaaggtatttgaatacaatacaaactgaagaaaatt 22643781  T
Q  140 catttcaa 147  Q
    ||||||||    
T  22643780 catttcaa 22643773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 25075310 - 25075201
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttga 115  Q
    |||||||||||| |||||||| ||||  |||| ||||||||||  |||||||||||||  |||||| |||||||||||| | |||||| || ||| || |    
T  25075310 ttttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaatgttgttaa 25075213  T
Q  116 agacaatacaaa 127  Q
    |||||| |||||    
T  25075212 agacaacacaaa 25075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 25133279 - 25133170
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttga 115  Q
    |||||||||||| |||||||| ||||  |||| ||||||||||  |||||||||||||  |||||| |||||||||||| | |||||| || ||| || |    
T  25133279 ttttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaatgttgttaa 25133182  T
Q  116 agacaatacaaa 127  Q
    |||||| |||||    
T  25133181 agacaacacaaa 25133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 25367723 - 25367836
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||  |||  ||| |||||||||||  ||| | |||| ||||||| ||| |||||| ||||||||||   |||||||| |||| |||||    
T  25367723 aatcatgtaaatcggaaaagaaaggcatcacatgaaatatcgatgatacgaagattaaagttcaatggttcttagaagacatttgaaga-aatagaaagt 25367821  T
Q  130 gaagaaaattcattt 144  Q
    |||||||||||||||    
T  25367822 gaagaaaattcattt 25367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 4325328 - 4325229
Alignment:
Q  44 acaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcat 142  Q
    ||||| ||| ||| |||||||||||| | || ||||||| | | || ||||||||| |||| ||||||||| ||||||||||||  || |||||||||||    
T  4325328 acaaaacaatacaccacatgaaggattaggggatatgaacaatcaaaatcaatgatacttataaggttttttaagacaatacaagttggagaaaattcat 4325229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 7742611 - 7742578
Alignment:
Q  313 tttgcttgtttttcaagttggatcggtagaaaaa 346  Q
    ||||||||||||||||||||||||||| ||||||    
T  7742611 tttgcttgtttttcaagttggatcggtggaaaaa 7742578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 18435412 - 18435299
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaa-ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    |||||||| | | |||||| |||||||| |||||||| || || ||||||||| | ||| |||| ||| ||   | ||||||||||||||||||||||      
T  18435412 aatcatgtaatttgacaaagcaagacatgacatgaagaataaaaggatatgaaaaatgacgatcgatggtttacataaggtttttgaagacaatacaagt 18435313  T
Q  129 tgaagaaaattcat 142  Q
    |||| |||||||||    
T  18435312 tgaaaaaaattcat 18435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 2e-57; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 16052275 - 16052106
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||| | |||| ||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  16052275 ttttgtagtgagaaatcatctaaatcaacaaatcaagacatcacatgaaggataaaggatatgaagattaaagaccaatgattcttagaaggtttttgaa 16052176  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||    
T  16052175 gacaatacaaaatgaagaaaattcatttcaagttccttggagtttctagacggaagaacaatcgaaaacg 16052106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 11310225 - 11310086
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 144  Q
    |||| ||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  11310225 caaatcaagacatcatgtgaaggatcaaggatatgaagatttaag-tcaatgattcttagaaggtttttgaaaacaatacaaagtgaagaaaatt-attt 11310128  T
Q  145 caagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  11310127 caagttcctaggagtttctagacggaagaacgatcgaaaacg 11310086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 24696698 - 24696868
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| ||||||| |||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| || |  |||||||||||||||||||    
T  24696698 ttttatagtaagaaatcatgtaaatcaacaaatcaagacatcacataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaa 24696797  T
Q  117 gacaatacaaagt-gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    || ||||||||||  || ||||||||||||||||| |||||| |||  |||||||| ||||||||||||||    
T  24696798 gaaaatacaaagtaaaaaaaaattcatttcaagtttctaggattttctagacggaaaaacgatcgaaaacg 24696868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 28902210 - 28902374
Alignment:
Q  21 gtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagaca 120  Q
    ||||| || |||||||| |||| ||||| | ||||||||| ||||||||||| ||||| || ||| |||| ||||| ||||||||||||| |||||||||    
T  28902210 gtagtgagaaatcatgtaaatcaacaaatcgagacatcacgtgaaggatcaatgatattaa-attaaagaccaatggttcttagaaggttattgaagaca 28902308  T
Q  121 atacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  28902309 atacaaagtgaataaaattcattttaagttcctaggagttttcagacgaaagaacgattgaaaacg 28902374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 16054411 - 16054579
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggat-atgaagattgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| ||||   ||  ||||||||||  ||||||||||||| | |||||  ||||||||||| | ||||||||||||| ||||    
T  16054411 ttttgtagtgaggaatcatgtaaatcattaattcaagacatcatgtgaaggatcaaggttgatgaa--ttgaagatcaagggttcttagaaggttgttga 16054508  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  16054509 agaaaatacaaagtgaagaaaattcatttcaagttcctaggagtttccagacaaaagaacgatcgaaaacg 16054579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 28901324 - 28901190
Alignment:
Q  40 atcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaatt 139  Q
    ||||||||| |||||||||| |||||| ||||| |||||||||||||||  |||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  28901324 atcgacaaatcaagacatcatatgaagaatcaatgatatgaagattgaat-tcaatggttcttataaggtttctgaagacaatacaaagtgaagaaaatt 28901226  T
Q  140 catttcaagttcctaggagttttcagacggaagaac 175  Q
    ||||||||| ||||||||||||  ||||||||||||    
T  28901225 catttcaagctcctaggagtttctagacggaagaac 28901190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 28859237 - 28859119
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||||| |||||||| ||| |||||||| | ||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||    
T  28859237 ttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatatcaagattaaagatcaatggttcttagatggtttttgaa 28859138  T
Q  117 gacaatacaaagtgaagaa 135  Q
    ||||||| |||||||||||    
T  28859137 gacaataaaaagtgaagaa 28859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 24120350 - 24120501
Alignment:
Q  27 aggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||||||||  ||||||| || ||||||||||  ||||||||||||||||| ||  ||||| | ||||| ||||||||||||||| ||||| |||| ||    
T  24120350 aggaatcatgcaaatcgaccaatcaagacatcatgtgaaggatcaaggatattaattttgaataccaatgtttcttagaaggttttcgaagataataaaa 24120449  T
Q  127 agtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  24120450 gatgaagaaaattcatttcaagttcctaggaatttccagacggaagaacgat 24120501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 28292087 - 28291964
Alignment:
Q  29 gaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    ||||||||| ||||| ||||  |||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||     
T  28292087 gaatcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaatacaaaa 28291988  T
Q  129 tgaagaaaattcatttcaagttcc 152  Q
    ||||||||||  ||||||||||||    
T  28291987 tgaagaaaataaatttcaagttcc 28291964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 14977092 - 14976952
Alignment:
Q  32 tcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtga 131  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| ||   ||||||||||||| ||||||||||||    
T  14977092 tcatgtaaattgacaaatcaagacatcacatgaaagatcaaggacatgaagattgaaaatcaatgattttt---aggtttttgaagataatacaaagtga 14976996  T
Q  132 agaaaattcatttcaagttcctaggagttttcagacggaagaac 175  Q
     ||||||| |||||||| | |||| ||||| |||||||||||||    
T  14976995 tgaaaattaatttcaagcttctagaagtttccagacggaagaac 14976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 32239404 - 32239537
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||| ||| ||| |||||| | |||||||||||||||||| ||||||||||||||||||| |||||| || ||| |||||| || ||    
T  32239404 ttttgtagtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttcttaaa 32239503  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    ||||||| ||||||||||||||||||||||||||    
T  32239504 gacaataaaaagtgaagaaaattcatttcaagtt 32239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 12956597 - 12956733
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| | ||||||| | |||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||  || || |||||||||| ||    
T  12956597 ttttgtagtgaagaatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaa 12956696  T
Q  117 gacaatacaaagtgaaga-aaattcatttcaagttcc 152  Q
    || ||||||||||||||| ||||||||||||||||||    
T  12956697 gataatacaaagtgaagagaaattcatttcaagttcc 12956733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 5153879 - 5154009
Alignment:
Q  22 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 121  Q
    ||||||| |||||||| ||| | |||| |||||||| |  ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  5153879 tagtaagaaatcatgtaaataggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaa 5153978  T
Q  122 tacaaagtgaagaaaattcatttcaagttcc 152  Q
    || ||  |||| |||||||||||||||||||    
T  5153979 tataacatgaataaaattcatttcaagttcc 5154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 29291891 - 29292021
Alignment:
Q  22 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 121  Q
    ||||||| |||||||| ||||| |||| ||||| ||||| ||||| ||| |||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  29291891 tagtaagaaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttgaagacaa 29291990  T
Q  122 tacaaagtgaagaaaattcatttcaagttcc 152  Q
     | |||||||| |||||||||||||| ||||    
T  29291991 cagaaagtgaaaaaaattcatttcaaattcc 29292021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 22894515 - 22894370
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||| ||| ||||| ||||||||||||||||| ||||| |||||||||  |||||  |||||||| |||||||||||||||||||||||    
T  22894515 aatcatgtaaatcga-aaatcaagatatcacatgaaggatcaatgatataaagattgaat-tcaattgttcttagatggtttttgaagacaatacaaagt 22894418  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    ||||||||||| ||| ||||||| ||||| || ||||| ||||||||||    
T  22894417 gaagaaaattcttttgaagttccaaggag-ttccagacagaagaacgat 22894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 13583505 - 13583398
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||||||| ||||||||||  ||||||||| ||||||||| |||||||| |||||| |||||||||| | |||||||||||||||||||    
T  13583505 aatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggttcttagaagatatttgaagacaatacaaagt 13583406  T
Q  130 gaagaaaa 137  Q
    ||| ||||    
T  13583405 gaaaaaaa 13583398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 30851070 - 30850963
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 144  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||| | ||||||||| || |||||| | |||||||||||||||||||| ||||    
T  30851070 caaagcaagacatctagtgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaatataatacaaagtgaagaaaattaattt 30850971  T
Q  145 caagttcc 152  Q
    ||||||||    
T  30850970 caagttcc 30850963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 5570083 - 5569981
Alignment:
Q  72 aggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaa 171  Q
    ||||||||||| || |||| ||||| |||||||||| ||||| ||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||    
T  5570083 aggatatgaagtttaaagaccaatggttcttagaagctttttaaagacaatacaagatgaagaaaattcatttcaacttcataggagttttcagacggaa 5569984  T
Q  172 gaa 174  Q
    |||    
T  5569983 gaa 5569981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 188 - 346
Target Start/End: Complemental strand, 28859123 - 28858966
Alignment:
Q  188 aagaattcgcacgtgaggggttgcctgatgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgcaactgc 287  Q
    ||||||||||||  |||||| | ||| ||| ||||||| |||||||| ||| |||| || |||||||||| ||||||||||  ||||||||||||  |||    
T  28859123 aagaattcgcacacgaggggctacctcatgtgccactgtgcatgggaaagtatttgtcactgcctcatgcccatcctgcacc-cagggatgcgcagttgc 28859025  T
Q  288 gtttttctgcgggttaaagtcactctttgcttgtttttcaagttggatcggtagaaaaa 346  Q
    |  ||||| || |||||| ||||||||| |||||||| |||||||||||||||||||||    
T  28859024 gaatttctacgtgttaaaatcactcttttcttgttttccaagttggatcggtagaaaaa 28858966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 11437548 - 11437671
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaa-ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    |||||||| ||||| |||| ||||||||||  |||| |||||||||||||||| ||||||| |||||| ||||||||||   ||||||||||||||| ||    
T  11437548 aatcatgtaaatcggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagag 11437647  T
Q  129 tgaagaaaattcatttcaagttcc 152  Q
    |||||| ||||||||| |||||||    
T  11437648 tgaagataattcatttgaagttcc 11437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 13081867 - 13081764
Alignment:
Q  83 attgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaa 182  Q
    |||||||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||  ||||  |||||||||| ||    
T  13081867 attgaagatcaagggttcttagaaggttgttgaagacaatacaaaatgaagaaaattcatttcaagtttctatgagtttctagacaaaagaacgatcaaa 13081768  T
Q  183 aacg 186  Q
    ||||    
T  13081767 aacg 13081764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 30543890 - 30544013
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattc-ttagaaggtttttgaagacaatacaaag 128  Q
    |||||||| |||||  ||| ||||| ||||||||||||||  |||||||||||||||||| |||||| ||| ||| ||| | ||| ||||||||| ||||    
T  30543890 aatcatgtaaatcggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaag 30543989  T
Q  129 tgaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||||||||||||    
T  30543990 tgaagaaaattcatttcaagttcc 30544013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 14424811 - 14424684
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||||| |||| ||||||| ||   |||||||  | |||| |||||||||||||||||| |||||||||||||||||||    
T  14424811 ttttttagtgagaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaa 14424712  T
Q  117 gacaatacaaagtgaagaaaattcattt 144  Q
     ||||| ||| |||||||||||||||||    
T  14424711 cacaattcaatgtgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 6888178 - 6888059
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||| ||||| |||  |||||| || || ||| ||||||||||||||||||||||||| |||||| || || ||||||||||||||||  |    
T  6888178 aatcatgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaatacaagtt 6888079  T
Q  130 gaagaaaattcatttcaagt 149  Q
    ||||||||| | ||||||||    
T  6888078 gaagaaaatccgtttcaagt 6888059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 27097798 - 27097665
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||||| |||| ||||||||||| ||| ||||  |  ||||||||||||||  | |||  |||||||||||| ||||||    
T  27097798 ttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattgaa--tgaatagttcttagaaggtctttgaa 27097701  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||  ||||||||||||| ||||||||||    
T  27097700 gacaatacaagttgaagaaaattcaattcaagttcc 27097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 23408181 - 23408111
Alignment:
Q  91 tcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    ||||||||||||||||| ||||||||||| || |||| || |||||||||||||||| || ||||||||||    
T  23408181 tcaatgattcttagaagatttttgaagactatgcaaaatgcagaaaattcatttcaattttctaggagttt 23408111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 31436644 - 31436720
Alignment:
Q  72 aggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||||||||||||| |||||||| |||||||   || |||||||||||||||||||||| |||||| ||||||||||||    
T  31436644 aggatatgaagattgacgatcaatggttcttag---gtatttgaagacaatacaaagtgaaaaaaatt-atttcaagttcc 31436720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 28074657 - 28074763
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 144  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||| || | ||||  |||||||  |||| |||||||  ||  |||||||||| |    
T  28074657 caaaacaagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggttttgaaagataatacaagttggggaaaattcatct 28074756  T
Q  145 caagttc 151  Q
    || ||||    
T  28074757 catgttc 28074763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 13530091 - 13529994
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||| |||||  ||| ||||||| || || ||||||||||| ||||||||| |||| |||||||||||||| ||| ||||| ||| ||||||||    
T  13530091 aatcatgtaaatcggtaaagcaagacaccatataaaggatcaagggatatgaagaatgaaaatcaatgattcttataagctttttaaaggcaatacaa 13529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 13619630 - 13619533
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||| |||||  ||| ||||||| || || ||||||||||| ||||||||| |||| |||||||||||||| ||| ||||| ||| ||||||||    
T  13619630 aatcatgtaaatcggtaaagcaagacaccatataaaggatcaagggatatgaagaatgaaaatcaatgattcttataagctttttaaaggcaatacaa 13619533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 29047267 - 29047170
Alignment:
Q  89 gatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||| |||||||| |||||||||||||||||| |||| |||||||||  || |  ||||||||| |||||| ||  |  |||||||||||||||||    
T  29047267 gatcaaggattcttataaggtttttgaagacaatgcaaaatgaagaaaaaccaatctaagttcctatgagtttccaagcaaaagaacgatcgaaaacg 29047170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 35135406 - 35135310
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||| || |||||||||| ||||||||||| || |||||  ||| |||| ||| |||| ||||||| || |||| ||||||||||||||| |||||    
T  35135406 aatcaggtaaatcgacaaaacaagacatcacgtggaggattgagggtatggagaatgaaaatcaatggttattaggaggtttttgaagacagtacaa 35135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 28260275 - 28260178
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||| ||||  |||| ||||||||||| || ||||||||| |||| ||  |||||||||||||  |||||| || ||||||||||| |||||||    
T  28260275 aatcatgtaaatcagcaaaacaagacatcacgtggaggatcaagtatatcaaatattgaagatcaatagttcttataaagtttttgaagataatacaa 28260178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 12956772 - 12956824
Alignment:
Q  181 aaaacgcaagaattcgcacgtgaggggttgcctgatgcgccactgcgcatggg 233  Q
    |||||||||||||| |||| ||| ||||||||| |||||| ||||||||||||    
T  12956772 aaaacgcaagaatttgcacttgaagggttgcctcatgcgctactgcgcatggg 12956824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 24584722 - 24584650
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaaga 90  Q
    ||||||||| || |||| ||| ||| ||||| | ||||||||||||||| ||||| ||||||||| ||||||||    
T  24584722 ttttgtagtgagaaatcttgtaaattgacaatc-aagacatcacatgaaagatcatggatatgaaaattgaaga 24584650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 8868072 - 8868108
Alignment:
Q  423 tgatgtagtctaccaatttgaatgaatgaatgtcgtt 459  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  8868072 tgatgtattctatcaatttgaatgaatgaatgtcgtt 8868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 27417261 - 27417092
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||||| |||| ||||||||||||||    
T  27417261 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatgatatgaatgttgaagaccaatggttctaagaaggtttttgaa 27417162  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
     ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  27417161 aacaatacaaagtgaagaaaattcatttcaagttccaaggagtttccagacggaagaacgattgaaaacg 27417092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 30998888 - 30999049
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| | || | |||| |||||||||| ||||| ||||  |||||||||||||||||| | |||||||||||| | ||||||||||||| |||||    
T  30998888 ttttgtagtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaaggttgttgaa 30998986  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatc 179  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||    
T  30998987 gacaatacaaagtggagaaaattcatttcaagttcatatgagttttcaaacggaagaacgatc 30999049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 21505137 - 21505000
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| ||||||||||| |||||| |||  ||||||||||||||| |||||||||| ||||| ||||||| ||||| |||| ||||||||||||||    
T  21505137 ttttgtagtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaaggtttttgaa 21505038  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttccta 154  Q
    ||||||||||  ||||||||||||||||||| ||||||    
T  21505037 gacaatacaagttgaagaaaattcatttcaaattccta 21505000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 1732674 - 1732802
Alignment:
Q  24 gtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaata 123  Q
    ||||| |||||||| ||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  | ||||||| |||||    
T  1732674 gtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttagaatatatttgaaggcaata 1732773  T
Q  124 caaagtgaagaaaattcatttcaagttcc 152  Q
    |||| |||| |||||| ||||||||||||    
T  1732774 caaaatgaataaaatttatttcaagttcc 1732802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 1733208 - 1733375
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagat-tgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||| |||||||| ||||||  |||||  ||||||||||   ||||||||| ||| ||||    
T  1733208 ttttgtagtgaggaatcatgtaaatcatcaaagcaagacatcacgtgaaggattaaggat--gaagaaatgaagatcaagagttcttagaatgttgttga 1733305  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||| |||||||||    
T  1733306 agataatacaaagtgaataaaattcattttagattcctaggagttttcagacggaagaacaatcgaaaac 1733375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 16593748 - 16593605
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagat-tgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| | ||||||||| ||||  |||| ||||||||||  ||||||||||| |||  |||||  |||||||||| | ||||||||||||| ||||    
T  16593748 ttttgtagtgaagaatcatgtaaatcatcaaatcaagacatcatttgaaggatcaacgat--gaagaaatgaagatcaagggttcttagaaggttgttga 16593651  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16593650 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 16593605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 18236288 - 18236134
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| | ||| |||| ||||||||||||||||||||||   |||||||||||||||  ||||| ||||||||||||| |||||||||||||||  |    
T  18236288 aatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaagacaatacaagat 18236189  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||||||||||||||||||||||  |||  |||  ||||||||||| |||||||||    
T  18236188 gaagaaaattcatttcaagttcaaaggcatttaaagacggaagaatgatcgaaaa 18236134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 35707920 - 35708087
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| ||||   ||| ||||||||||  ||||| |||||||||  ||||| ||||| ||||| | ||||||||||||| ||||    
T  35707920 ttttgtagtgaggaatcatgtaaatcataaaatcaagacatcatgtgaagtatcaaggat--gaagaattgaatatcaaggtttcttagaaggttgttga 35708017  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    |||||||||||| |||| |||||| |||||||||||  ||||||||||||||| ||||||||||||||||    
T  35708018 agacaatacaaaatgaacaaaatttatttcaagttctcaggagttttcagacgaaagaacgatcgaaaac 35708087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 24188085 - 24188217
Alignment:
Q  16 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 115  Q
    |||||||||| || |||||||| ||||||| || |||| ||||||||||||||||||| |||||||||||||||| ||||   |||||||| ||||||||    
T  24188085 attttgtagtgagaaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaagtttttga 24188183  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||||||||||||||| ||||||| |||||    
T  24188184 agacaatacaaagtgaagaagattcattccaagt 24188217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 25474154 - 25474320
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||  ||||| ||||||||| |  | ||||||| |||| | ||||||||||||| |||||    
T  25474154 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggatgtaga-attgaaggtcaagggttcttagaaggttgttgaa 25474252  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||| |||| | ||||||||| |||||    
T  25474253 gacaatataaagtgaagaaaattcatttcaggttcctagtagtttccagatgaaagaacgattgaaaa 25474320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 17415148 - 17415028
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||| ||| ||||| |||| ||||||||||| ||||||||| |||| |||||||||||| ||||||| ||||||| || | ||||||||||| | |||||    
T  17415148 aatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggacatgaagattgaa-atcaatggttcttaggagttatttgaagacaacaaaaagt 17415050  T
Q  130 gaagaaaattcatttcaagttc 151  Q
    ||||||||||||||||||||||    
T  17415049 gaagaaaattcatttcaagttc 17415028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 9504214 - 9504346
Alignment:
Q  179 cgaaaacgcaagaattcgcacgtgaggggttgcctgatgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatg 278  Q
    ||||||| ||| ||||||||| || |||| | ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| |  ||||||||    
T  9504214 cgaaaacacaaaaattcgcacatgtggggcttcctcatgcgccactgcgcatgggatagtgtttgtcactgcctcatgcgcatcctgcgccacagggatg 9504313  T
Q  279 cgcaactgcgtttttctgcgggttaaagtcact 311  Q
    ||||  || |||||||| ||||||||| |||||    
T  9504314 cgcagttgtgtttttctacgggttaaaatcact 9504346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 9515580 - 9515712
Alignment:
Q  179 cgaaaacgcaagaattcgcacgtgaggggttgcctgatgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatg 278  Q
    ||||||| ||| ||||||||| || |||| | ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| |  ||||||||    
T  9515580 cgaaaacacaaaaattcgcacatgtggggcttcctcatgcgccactgcgcatgggatagtgtttgtcactgcctcatgcgcatcctgcgccacagggatg 9515679  T
Q  279 cgcaactgcgtttttctgcgggttaaagtcact 311  Q
    ||||  || |||||||| ||||||||| |||||    
T  9515680 cgcagttgtgtttttctacgggttaaaatcact 9515712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 18818826 - 18818953
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggata-----tgaagattgaagatcaatgattcttagaaggtttttgaagacaatac 124  Q
    |||||||| ||||| |||| |||| |||||| |||||||| |||||||     |||| | ||||||| |||| |||||||||||| ||||||||||||||    
T  18818826 aatcatgtaaatcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaatac 18818925  T
Q  125 aaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||||| ||||||||||    
T  18818926 aaagtgaagaaaattcaattcaagttcc 18818953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 22511062 - 22511184
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||| ||| ||||||||||  |||| |||  |||||||||||||||| | |||||||||| |||| ||||||||||    
T  22511062 ttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatcaagtgaaagattgaggatatgaagattgatgttcaatgattcatagatggtttttgaa 22511161  T
Q  117 gacaatacaaagtgaagaaaatt 139  Q
    |||||||| || |||||||||||    
T  22511162 gacaatacgaaatgaagaaaatt 22511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 17152270 - 17152379
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| ||||||| |||||||| ||||| |||| |||||||||   |||||||||||||||||||||| |||| || |||| |||||||||||||||||||    
T  17152270 ttttttagtaagaaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttcttagaaggtttttgaa 17152369  T
Q  117 gacaatacaa 126  Q
    || |||||||    
T  17152370 gataatacaa 17152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 14922024 - 14921910
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||  ||| ||| ||||||  ||||| ||| |||||||||||||||||| |||||| |||||||||||| | || ||||||||||||||    
T  14922024 aatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggtatatgtagacaatacaaagt 14921925  T
Q  130 gaagaaaattcattt 144  Q
    |||||||| ||||||    
T  14921924 gaagaaaaatcattt 14921910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 19541166 - 19541291
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| ||||  |||||||||  ||||||||| ||||||||||||||||||| ||||| |||||| |||| | || |||||||||||||||    
T  19541166 aatcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataagg-tattaaagacaatacaaagt 19541264  T
Q  130 gaagaaaattcatttcaagttcctagg 156  Q
     |||||  |||||||||||||| ||||    
T  19541265 taagaatcttcatttcaagttcatagg 19541291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 31262142 - 31262241
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 144  Q
    |||| ||||||| ||||||||| ||| |||||||||||||||||||| |||| ||||||| |||| ||||||||||||| ||  ||||||||||||||||    
T  31262142 caaaacaagacaccacatgaag-atcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaatataagttgaagaaaattcattt 31262240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 24047520 - 24047608
Alignment:
Q  39 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattct-tagaaggtttttgaagacaatacaa 126  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||||  | ||||||| ||||||||||||||    
T  24047520 aatcggcaaaacaagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaatacaa 24047608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 34063824 - 34063680
Alignment:
Q  32 tcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtga 131  Q
    |||||| ||||| |||| |||||||||   ||||||||| | |||||||||||| ||  |  ||| || |||||||   |||||||||||||||||||||    
T  34063824 tcatgtaaatcggcaaaacaagacatcgtgtgaaggatcgacgatatgaagatttaattttgatggttattagaagacatttgaagacaatacaaagtga 34063725  T
Q  132 agaaaattcatttcaagttcctaggagttttcagacggaagaacg 176  Q
    ||||||||||||| ||||||| |||  || | |||||||||||||    
T  34063724 agaaaattcatttgaagttccaaggcattgtgagacggaagaacg 34063680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 17884588 - 17884507
Alignment:
Q  70 caaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttc 151  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||  |||||||    
T  17884588 caaggatatgaagaatgaagatcattgattcttagaaggtttttgaaaactatacaaaccggagaaaattcatcccaagttc 17884507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 32619746 - 32619863
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||  || |||||||| | |||||||| ||||||||||| |||    ||||||||||||||| |||| |||||   |||| ||||||||||||||    
T  32619746 ttttgtagcgagaaatcatgtaattcgacaaatcaagacatcacgtga----tcaaggatatgaagaatgaa-atcaaaagttctaagaaggtttttgaa 32619840  T
Q  117 gacaatacaaagtgaagaaaatt 139  Q
    |||||||||||||||| ||||||    
T  32619841 gacaatacaaagtgaataaaatt 32619863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 19949417 - 19949365
Alignment:
Q  123 acaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 175  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  19949417 acaaagtgaagaaaattcatttcaagttcctaggagttttcagatgaaagaac 19949365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 22525744 - 22525685
Alignment:
Q  91 tcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  22525744 tcaatggttcttagaaggtatttgaagacaacacaaagtgaagaaaatttatttcaagtt 22525685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 17862539 - 17862661
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||| | ||||  ||||||||||||||| ||||||||||||||||| |||| |||  || |||||||||  |||||||||||| |||||  |    
T  17862539 aatcatgtaaattggcaaaataagacatcacatgaaagatcaaggatatgaagaatgaaaatcggtggttcttagaatttttttgaagacagtacaagtt 17862638  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    |  ||||||||||  ||||||||    
T  17862639 ggggaaaattcatcccaagttcc 17862661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 31274131 - 31274205
Alignment:
Q  76 tatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    |||||| ||||||||| |||| |||||||||||| ||||||||||||| ||  ||||||||||||||| ||||||    
T  31274131 tatgaaaattgaagattaatggttcttagaaggtctttgaagacaatataagttgaagaaaattcattccaagtt 31274205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 15454509 - 15454433
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 121  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||| |||| |||||| ||| ||| | |||||||    
T  15454509 caaaacaagacatcacatgaaggatcaaggatatgaagaataaagataaatggttcttaaaagttttctaaagacaa 15454433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 21849039 - 21848963
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||||||||||||||||||||||||||  || | |||| ||||||| |||||| |||||||| ||| |||||||||    
T  21849039 caagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaaggttttggaacacaatacaa 21848963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 27917976 - 27917916
Alignment:
Q  22 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag 82  Q
    ||||||| |||||||| |||||||||| |||||||||| ||||||||||||||| ||||||    
T  27917976 tagtaagaaatcatgtcaatcgacaaatcaagacatcagatgaaggatcaaggagatgaag 27917916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 176
Target Start/End: Original strand, 39730591 - 39730722
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaa-ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatt 143  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||  |||  ||||||||||  ||||||||||||||  |  ||  ||||||||||     
T  39730591 caaaacaagacatcacatgaaggatcaagggatatgaaga-tgaagactaatatttcttagaagaattttgaagacaataagagttggggaaaattcatc 39730689  T
Q  144 tcaagttcctaggagttttcagacggaagaacg 176  Q
     |||||||| |||  |||  |||||||||||||    
T  39730690 ccaagttccaaggcatttcaagacggaagaacg 39730722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 15829238 - 15829391
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaag--------- 107  Q
    ||||| ||| || |||||||| |||||||||| ||||||||||| ||||||||||  |||||||| |||||||| ||| | ||| || |||             
T  15829238 ttttgcagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcattgatatgaa-attgaagaccaacggttcctataagttttttttt 15829336  T
Q  108 -gtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
      ||||| |||| |||||||||| ||||||||||||||||| || ||||||||||    
T  15829337 ttttttttaagaaaatacaaagtaaagaaaattcatttcaaatttctaggagttt 15829391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 19949467 - 19949433
Alignment:
Q  105 aaggtttttgaagacaatacaaagtgaagaaaatt 139  Q
    |||||| ||||||||||||||||||||||||||||    
T  19949467 aaggttattgaagacaatacaaagtgaagaaaatt 19949433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 35220589 - 35220630
Alignment:
Q  423 tgatgtagtctaccaatttgaatgaatgaatgtcgttgtgtt 464  Q
    ||||||| |||| |||||||||||||||||||||||| ||||    
T  35220589 tgatgtactctatcaatttgaatgaatgaatgtcgttttgtt 35220630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 2e-57; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 11769992 - 11769831
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||| ||| || |||||||| |||||| ||| |||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  11769992 ttttgcagtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaa 11769893  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  11769892 gacaatacaaagtgaagaaaattcatttcaagttcctatgagtttccagacggaagaacgat 11769831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 23519766 - 23519606
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||| | |||||||| || |||||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||    
T  23519766 ttttgtagtgagaaatcatgtaaatcgacacatcaagacattacgtgaaggatcaagaatatgaa-attgaagaccaatggttcttagaaggttgttgaa 23519668  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23519667 gacaatagaaagtgaagaaaatttatttcaagttcctaggagttttcagacggaagaacgat 23519606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 26657593 - 26657761
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| |  |||||||| |||||||||| |||||||| |  ||||||||||||| |||||| || |||| |||||  |||||| ||||||||||||    
T  26657593 ttttgtagtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataaggtttttgaa 26657691  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  26657692 gacaaaacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaatgatcgaaaacg 26657761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 25494486 - 25494357
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||| ||||| |||| |||||||||||||||| ||||| |||||||||||||||||||    
T  25494486 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagcaag-atatgaagattgaagaccaatggttcttagaaggtttttgaa 25494388  T
Q  117 gacaatacaaagtgaagaaaattcatttcaa 147  Q
    |||||||||||||||||||||||||||||||    
T  25494387 gacaatacaaagtgaagaaaattcatttcaa 25494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 30781877 - 30782044
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||  |||||||||||||||  ||||| ||||||||||| | |||||| |||||| ||||    
T  30781877 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaagaattgaagatcaagggttcttaaaaggttgttga 30781974  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| |  ||||||||||||||||    
T  30781975 agacaatacaaagtgaagaaaattgatttcaagttcctaggtgttttcaggcaaaagaacgatcgaaaac 30782044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 25727907 - 25727751
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  25727907 ttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaa 25727808  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaa 174  Q
    |||||| |||||||||| |||||  ||| |||||||||| ||||| |||| |||||||    
T  25727807 gacaatccaaagtgaag-aaatttttttgaagttcctagaagtttccagatggaagaa 25727751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 25736315 - 25736159
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  25736315 ttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaa 25736216  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaa 174  Q
    |||||| |||||||||| |||||  ||| |||||||||| ||||| |||| |||||||    
T  25736215 gacaatccaaagtgaag-aaatttttttgaagttcctagaagtttccagatggaagaa 25736159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 18300989 - 18300857
Alignment:
Q  29 gaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 128  Q
    ||||||||| ||| |||||| ||||||||||| |||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||| ||    
T  18300989 gaatcatgtaaatagacaaatcaagacatcacgtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaatacagag 18300890  T
Q  129 tgaagaaaattcatttcaagttcctaggagttt 161  Q
    ||||||||| | ||||||| |||||||||||||    
T  18300889 tgaagaaaaattatttcaaattcctaggagttt 18300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 23223529 - 23223674
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttt-tga 115  Q
    ||||||||| || |||||||| |||| ||||  ||||||||| |||||||  |||||||||||||||||||| | |||| |||| ||||||||||| |||    
T  23223529 ttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttga 23223628  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23223629 agacaatacaaagtgaaaaaaattcatttcaagttcctaggagttt 23223674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 25730569 - 25730401
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||  || |||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||     
T  25730569 ttttgtagcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaaggagatgaagatttaagatcaatggttcttggaaggtttttgac 25730470  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||||||  |||||||||||||||| ||| || ||||||| ||||| | || |||||||| ||||||||||    
T  25730469 gacaatcgaaagtgaagaaaattc-tttaaaattcctagaagtttacggatggaagaacaatcgaaaacg 25730401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 30675601 - 30675745
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||||| |||   |||||||||  |||||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  30675601 ttttatagtgagaaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaaggtttttgaa 30675699  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagtttt 162  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  30675700 gataatacaaagtgaagaaaattcatttcaagttcctaggagtttt 30675745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 50047325 - 50047460
Alignment:
Q  51 aagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    |||| ||||| ||||||||||||| |||||| |||||||||||||| | |||| |||||| |||||||||||||||| |||||||||||||||| |||||    
T  50047325 aagaaatcacgtgaaggatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaatacaaaatgaagaaaattcattttaagtt 50047424  T
Q  151 cctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||||||  || |||||||||| |||||||    
T  50047425 cctaggagttttcgaacagaagaacgatagaaaacg 50047460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 12423847 - 12423742
Alignment:
Q  83 attgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaa 182  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  12423847 attgaagatcaaaggttcttagaaggttgttgaagacaatacaaagtgaaggaaattcatttcaagttcctaggagttttcaaacgaaagaacgattgaa 12423748  T
Q  183 aacgca 188  Q
    ||||||    
T  12423747 aacgca 12423742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 26102195 - 26102332
Alignment:
Q  39 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaat 138  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||    
T  26102195 aatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaatacaagttgaggaaaat 26102294  T
Q  139 tcatttcaagttcctaggagttttcagacggaagaacg 176  Q
    |||| ||||||| | |||| |||  |||| ||||||||    
T  26102295 tcatctcaagtttcaaggaatttcaagactgaagaacg 26102332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 26854305 - 26854183
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| || || |||| |||||||| |  ||||||||||| |||||||||||||||| |||||| |||||||||| | |||||||||||||||||||    
T  26854305 aatcatgtaaaccggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaagt 26854206  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||| |||||||    
T  26854205 gaagaaaattcatttgaagttcc 26854183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 52271198 - 52271084
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    ||||||||| |||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||     
T  52271198 tgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaaattccaaggaattg 52271099  T
Q  162 tcagacggaagaacg 176  Q
      |||||||||||||    
T  52271098 caagacggaagaacg 52271084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 9328333 - 9328444
Alignment:
Q  66 ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcag 165  Q
    |||||| ||||||||||||||||  |||||  ||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||     
T  9328333 ggatcagggatatgaagattgaat-tcaatcgttcttagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctaggagtttccat 9328431  T
Q  166 acggaagaacgat 178  Q
    | |||||||||||    
T  9328432 atggaagaacgat 9328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 9353178 - 9353293
Alignment:
Q  66 ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcag 165  Q
    |||||| ||||||||||||||||  ||||| |||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||||| ||     
T  9353178 ggatcagggatatgaagattgaat-tcaatcattcttagaaggtttttgaagaaaatactaagtgaagaaaattcagtccaagttcctatgagtttccat 9353276  T
Q  166 acggaagaacgatcgaa 182  Q
    | |||||||||||||||    
T  9353277 atggaagaacgatcgaa 9353293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 19257769 - 19257669
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||| |    
T  19257769 caagacatcacatgaaagatcgaggatatgaagattgaacatcaag--ttcttagaaggtctttgaagacaatacaaagtgaagaaaatttatttcaatt 19257672  T
Q  150 tcc 152  Q
    |||    
T  19257671 tcc 19257669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 9252558 - 9252446
Alignment:
Q  66 ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcag 165  Q
    |||||| ||||||||||||| ||  | |||| || |||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||    
T  9252558 ggatcagggatatgaagatttaac-tgaatggttattagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctatgagttttcag 9252460  T
Q  166 acggaagaacgatc 179  Q
    |  |||||||||||    
T  9252459 attgaagaacgatc 9252446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 25373907 - 25373996
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttc 151  Q
    ||||||||| |||||||||||||| |||| ||||| ||||||||||||| || ||||||||||||  |||||||||||||||||||||||    
T  25373907 tgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaagacaatacaagatgaagaaaattcatttcaagttc 25373996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 31313668 - 31313777
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| ||||||| |||||||| ||| |  ||| ||| ||||||| |||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  31313668 ttttttagtaagaaatcatgtaaattggaaaaacaatacatcacgtgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaa 31313767  T
Q  117 gacaatacaa 126  Q
    ||||||||||    
T  31313768 gacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 15298855 - 15298734
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| |||| ||||| ||||  | ||||||| |||||||||||||| |||||||||| |||||| ||| | ||||||| |||||||| ||    
T  15298855 aatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaag-caatacaatgt 15298757  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    ||| |||||||||||||||||||    
T  15298756 gaataaaattcatttcaagttcc 15298734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 27461175 - 27461070
Alignment:
Q  22 tagtaaggaatcatgttaatcg-acaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagaca 120  Q
    ||||||| |||||||| | ||| | ||| |||||||||||||||| |||| |||||||||||  |||||||||||| |||||| ||||||||||||||||    
T  27461175 tagtaagaaatcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagaca 27461076  T
Q  121 atacaa 126  Q
    ||||||    
T  27461075 atacaa 27461070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 15416959 - 15416866
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 122  Q
    |||||||| | ||| |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||||| ||||||||    
T  15416959 aatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 25126630 - 25126731
Alignment:
Q  51 aagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    |||||||||| ||||||||  ||||||||| || |  ||||||||  |||||||||  | |||||| |||||||||| ||||||||||||||||||||||    
T  25126630 aagacatcacgtgaaggattgaggatatgacgactacagatcaatagttcttagaaaatctttgaatacaatacaaaatgaagaaaattcatttcaagtt 25126729  T
Q  151 cc 152  Q
    ||    
T  25126730 cc 25126731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 23521727 - 23521566
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggttttt--- 113  Q
    ||||||||| || |||||||| |||||||| | ||||||||||| |||||||| | | ||||||| |||||||| ||||| ||||||||||||| ||       
T  23521727 ttttgtagtgagaaatcatgtaaatcgacacatcaagacatcacgtgaaggataaggaatatgaa-attgaagaccaatggttcttagaaggttcttaga 23521629  T
Q  114 --------gaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacg 168  Q
            |||||||||| ||||||||| ||| | || ||||||||||||||||||| |||||    
T  23521628 aggttcttgaagacaatagaaagtgaagtaaaattatatcaagttcctaggagttttaagacg 23521566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 23505938 - 23506007
Alignment:
Q  82 gattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||| | ||| ||||   ||||||||||||||||||||||||||||||||||||||||||    
T  23505938 gattgaagatcaatggt-cttggaagacatttgaagacaatacaaagtgaagaaaattcatttcaagttcc 23506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 34381844 - 34381920
Alignment:
Q  34 atgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtt 110  Q
    |||| |||||||||| ||| ||||||| |||| |||||||||||||||| ||||||||||||| || ||| ||||||    
T  34381844 atgtaaatcgacaaatcaaaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggttgttataaggtt 34381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 18795325 - 18795407
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaagg-tttttgaagacaatacaa 126  Q
    |||| ||||||||||||||| ||||||| |||||||| | ||||||| |||||||||  ||||| ||||| ||||||||||||    
T  18795325 caaaacaagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattctatgaaggtttttttaagacaatacaa 18795407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 31319576 - 31319504
Alignment:
Q  50 caagacatcacatgaaggatcaag-gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 122  Q
    ||||||| ||||| |||||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||||    
T  31319576 caagacaccacat-aaggatcaagagatatgaataatgaagatcaatggttcttagaagttttttgaagacaat 31319504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 25665701 - 25665601
Alignment:
Q  84 ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaa 183  Q
    |||||| |||||| |||||| ||  | ||| ||||||||||||||||||||||| |||||| ||||||| |||  ||   ||||||||||||||| ||||    
T  25665701 ttgaagttcaatggttcttataaaatatttaaagacaatacaaagtgaagaaaaatcatttgaagttccaaggcattgcaagacggaagaacgattgaaa 25665602  T
Q  184 a 184  Q
    |    
T  25665601 a 25665601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 8247655 - 8247596
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggat 76  Q
    ||||||||| ||||||||||| |||| ||||| ||||||||||| |||| ||||||||||    
T  8247655 ttttgtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcaaggat 8247596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 21548820 - 21548899
Alignment:
Q  73 ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||||| | |||| ||||||||||   |||||||| |||||||  |||| ||||||||||| |||||||    
T  21548820 ggatatgaagattgaagctaaatggttcttagaagacatttgaagataatacaagttgaaaaaaattcatttgaagttcc 21548899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 18391232 - 18391334
Alignment:
Q  51 aagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaagg-tttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||||||||||| || |||||| | || |  ||||||||||| |||||| |||| ||||| ||||||||||||| |||| |||| | || ||||||    
T  18391232 aagacatcacatgaagaatgaaggatttaaaaaacgaagatcaatggttcttaaaaggtttttttaagacaatacaaaatgaaaaaaaattatctcaagt 18391331  T
Q  150 tcc 152  Q
    |||    
T  18391332 tcc 18391334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 15851163 - 15851110
Alignment:
Q  73 ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||| || |||||| ||||||| ||||||||||||||||||| |||||||    
T  15851163 ggatatgatgaatgaagaccaatgatacttagaaggtttttgaagaaaatacaa 15851110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 1e-55; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 30355433 - 30355591
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  30355433 ttttgtagtaaggattcacgtaaatcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaa 30355532  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 175  Q
    ||||||| |||||||| ||||||||||||||||||  |||||||| |||||||||||||    
T  30355533 gacaataaaaagtgaataaaattcatttcaagttcacaggagtttccagacggaagaac 30355591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 15575041 - 15575208
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||  ||||||||||| |||  ||||| ||||||||||| ||||||||||| |||  ||||| ||||||||||| | ||||||||||||  ||||    
T  15575041 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaacgat--gaagaattgaagatcaagggttcttagaaggtcgttga 15575138  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  15575139 agacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacggaagaaagatcgaaaac 15575208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 17860446 - 17860279
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| | || ||||| || |||||||| |||||||| ||| ||| ||| |||||||  ||||| ||||||||||||||||| |    
T  17860446 ttttgtagtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaaggtttttgta 17860348  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||    
T  17860347 gacaatacaaagtgaagaaaattcatttcaagttcctaggagtttccagtcgaaagaacgattgaaaac 17860279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 26499832 - 26499712
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||  ||||| |||| ||||| | ||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26499832 aatcatgcaaatcggcaaaacaagataccacgtgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagt 26499733  T
Q  130 gaagaaaattcatttcaagtt 150  Q
     ||||||||||||||||||||    
T  26499732 aaagaaaattcatttcaagtt 26499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 24507440 - 24507306
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||| ||| |||| ||||| ||||||||||| ||||||||  | ||||||||||||||||| ||||| || ||||||| ||| ||||    
T  24507440 ttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaagttttatgaa 24507342  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    || |||||||||||||||||||| ||||||||||||    
T  24507341 gaaaatacaaagtgaagaaaatttatttcaagttcc 24507306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 33638490 - 33638381
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| ||||| |||| ||| | ||||  ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  33638490 aatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagt 33638391  T
Q  130 gaagaaaatt 139  Q
    ||| ||||||    
T  33638390 gaataaaatt 33638381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 15998628 - 15998769
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| ||||||||||| |||   |||| ||||||||||  |||| ||||||||||| |||  ||||||| ||  |  |||||||||||| ||| |    
T  15998628 ttttgtagtgaggaatcatgtaaatgaccaaatcaagacatcatgtgaatgatcaaggataagaa--ttgaagaccatgggctcttagaaggttgttgta 15998725  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagtt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  15998726 gacaatacaaagtgaagcaaattcatttcaagttcctaggagtt 15998769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 9396583 - 9396496
Alignment:
Q  39 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    ||||| |||| ||||||||||| |||||||||||||| | ||||| |||||||||| |||||||||||  ||||||||||||||||||    
T  9396583 aatcggcaaaacaagacatcacgtgaaggatcaaggacaagaagaatgaagatcaacgattcttagaaattttttgaagacaatacaa 9396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 16439607 - 16439741
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||||| ||||| ||||| ||||||||||| |||||||||||| ||||||||| | ||||||||| |||||||  |   ||||||||||  ||||     
T  16439607 caagacatcagatgaaagatcagggatatgaagaatgaagatcaatggttcttagaatggttttgaagaaaatacaagttcgggaaaattcatcgcaaga 16439706  T
Q  150 tcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||| ||   |||| ||||||||||||| |||||||    
T  16439707 tccaagacattttaagacggaagaacgctcgaaaa 16439741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 33638259 - 33638325
Alignment:
Q  74 gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattc 140  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||| |||||||    
T  33638259 gatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtgaataaaattc 33638325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 24618053 - 24618117
Alignment:
Q  71 aaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaa 135  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||  |||||||    
T  24618053 aaggatatgaagattgaagatcaatgattcttagaagatctttaaagacaatacaagttgaagaa 24618117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 16387253 - 16387120
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| ||||||| |||||||| ||||| |||| |||||||| |  ||| ||||||||||||||||| || |||| ||||| | |||| |||| |||| ||    
T  16387253 ttttatagtaagaaatcatgtaaatcggcaaatcaagacattaggtgagggatcaaggatatgaagtttaaagaccaatggtccttaaaaggatttttaa 16387154  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    || |||| |   |||||||||||| |||||||||    
T  16387153 gaaaatataggatgaagaaaattcgtttcaagtt 16387120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 9943135 - 9943013
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||  ||| |||||||| | || ||||| |||||||||||||| |||| |||||||  ||||| ||||||||| ||||||||  ||  |    
T  9943135 aatcatgtaaatcggaaaaacaagacattaaatcaaggaccaaggatatgaagaatgaaaatcaatggctcttataaggtttttaaagacaatgtaagtt 9943036  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    |  |||||||||| |||||||||    
T  9943035 ggggaaaattcatctcaagttcc 9943013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 14924383 - 14924284
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||||| |||||| | ||  |||||||| |||||||||||||| ||| | ||| |||||||||||||||||||  |||  ||||||||||||| ||    
T  14924383 caagacatcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaatacaagatga--aaaattcatttcaggt 14924286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 22262458 - 22262587
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| |||| |||||| ||| | |||| ||| ||||||  ||| |||| |||||||||||| ||||| | |||||||| ||| ||||||||||||    
T  22262458 ttttgtagtgaggactcatgtaaattggcaaatcaaaacatcatgtgagggat-aaggatatgaagtttgaacaccaatgatttttaaaaggtttttgaa 22262556  T
Q  117 gacaatacaaagtgaagaaaattcatttcaa 147  Q
    | || | |||  | |||||||||||||||||    
T  22262557 ggcagtgcaagataaagaaaattcatttcaa 22262587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 32930399 - 32930334
Alignment:
Q  61 atgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||| ||||||| |||||||||  |||| ||||||||||||| |||||||||| ||||||||||||    
T  32930399 atgagggatcaaagatatgaaggatgaaaatcaatgattcttggaaggtttttaaagacaatacaa 32930334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 26512732 - 26512644
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    ||||| |||||||||||||||  |||||||||||| |||||| ||||| | |||| |||||||||  |||  ||||||||| |||||||    
T  26512732 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatacaagatgataaaaattcatctcaagtt 26512644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 26517848 - 26517760
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
    ||||| |||||||||||||||  |||||||||||| |||||| ||||| | |||| |||||||||  |||  ||||||||| |||||||    
T  26517848 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatacaagatgataaaaattcatctcaagtt 26517760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 12972354 - 12972291
Alignment:
Q  46 aaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggt 109  Q
    |||||||||||| || |||| |||| | ||||||||||||||||||||||| ||||| ||||||    
T  12972354 aaaccaagacataacgtgaaagatcgatgatatgaagattgaagatcaatggttctttgaaggt 12972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 23419052 - 23418983
Alignment:
Q  73 ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcat 142  Q
    |||| |||||| |||| ||||||| | | |||||||||||||||| ||||||||  ||||||||||||||    
T  23419052 ggatttgaagaatgaatatcaatgttacgtagaaggtttttgaagtcaatacaagttgaagaaaattcat 23418983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 6e-54; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 19219209 - 19219074
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19219209 ttttgtagtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaa 19219110  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||||||||||||| |||||||||||||| ||||    
T  19219109 gacaatacaaagtgaataaaattcatttcaaattcc 19219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 19263905 - 19263769
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggt---tttt 113  Q
    ||||||||||||||||||||  ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||||    
T  19263905 ttttgtagtaaggaatcatggaaatcgtcaaatcaagtcatcacatgaaggatcaaggatatgaagattgaagatcaatggttcatagaaggtttttttt 19263806  T
Q  114 gaagacaatacaaagtgaagaaaattcatttcaagtt 150  Q
     ||||||||||||||||||||||||||||||||||||    
T  19263805 taagacaatacaaagtgaagaaaattcatttcaagtt 19263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 10341903 - 10342072
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||| || || |||||||| |||| ||||| | | ||||||  |||||||| |||||||  |||||||||||||| || |||||||||||||||||||    
T  10341903 ttttgttgtgagaaatcatgtaaatcaacaaatccaaacatcaagtgaaggattaaggatagaaagattgaagatcagtggttcttagaaggtttttgaa 10342002  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||||||||  |||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  10342003 gacaatacaaagtgagaaaaactcatttcaagttcctaggagtttctagacggaagaacgatcgaaaacg 10342072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 16970578 - 16970746
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||| |||||||||| |||||||||| ||||||||||  ||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  16970578 ttttgtagtagggaatcatgtaaatcgacaaatcaagacatcatgtgaaggatcaaggatatgaagtttgaagaccaacggttcttagaaggtttttgaa 16970677  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    || |||||||  ||||||||||| | || |||||||||| ||||| |||||  |||||||||||||||||    
T  16970678 gaaaatacaagatgaagaaaattta-ttgaagttcctagcagtttccagacaaaagaacgatcgaaaacg 16970746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 25883220 - 25883386
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    |||| |||| |||||||||||  |||  |||| |||||||||   | |||||||||||||  ||||| ||||||||||| | ||||||||||||| ||||    
T  25883220 ttttatagtgaggaatcatgtacatcatcaaatcaagacatcttgttaaggatcaaggat--gaagaattgaagatcaagggttcttagaaggttgttga 25883317  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  25883318 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaacaatcgaaaa 25883386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 25919469 - 25919345
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  25919469 ttttgtagtgaggaatcatgtaaatcgacaaaccaagatatcacatgaaggatcaaggatatgaagattgaagatcaacgatttttagaa-gtttttgaa 25919371  T
Q  117 gacaatacaaagtgaagaaaattcat 142  Q
    || ||| |||||||| ||||||||||    
T  25919370 gataatgcaaagtgacgaaaattcat 25919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 27415285 - 27415452
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||||||||||| |||||||| ||| ||| || ||||||||||||| |||||||||||||| | | |||||||| || |  ||||||||| ||||||| |    
T  27415285 ttttgtagtaagaaatcatgtaaatagaccaatcaagacatcacataaaggatcaaggataagga-attgaagaccattagttcttagaatgtttttgga 27415383  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||| || ||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||    
T  27415384 gaca-taaaaagtgaagaaaattcatttcaacttcctaggagtttcaagacgaaagaacgatcgaaaacg 27415452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 11521350 - 11521450
Alignment:
Q  86 gaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    ||||||||| | || |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11521350 gaagatcaagggttgttagaaggttgttgaagataatacaaagcgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 11521449  T
Q  186 g 186  Q
    |    
T  11521450 g 11521450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 1475249 - 1475117
Alignment:
Q  45 caaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatt 143  Q
    |||| ||||||||||  |||||||||||||||  ||||| |||||||||||   ||||||||||||| ||||||| |||||||||||||||||||| |||    
T  1475249 caaatcaagacatcatgtgaaggatcaaggat--gaagagttgaagatcaagagttcttagaaggttattgaagataatacaaagtgaagaaaatttatt 1475152  T
Q  144 tcaagttcctaggagttttcagacggaagaacgat 178  Q
    ||||||||||||||||||||||||| |||||||||    
T  1475151 tcaagttcctaggagttttcagacgaaagaacgat 1475117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 18065913 - 18066082
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggttttt-ga 115  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||| ||||||||| || | | | ||| |||| ||||| ||||||||| |||||| ||    
T  18065913 ttttgtagtaagaaatcatgtaaatagacaaatcaagacatcacataaaggatcaatgacaagga-attaaagaccaatggttcttagaaagttttttga 18066011  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||| || ||  ||||||| |||| ||||    
T  18066012 agaaaatacaaagtgaagaaaattcatttcaacttcctaggagtttccaaaccaaagaacgctcgagaacg 18066082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 19543109 - 19542987
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    ||||||||||||||  ||  ||||||||||||||||||||| || || | |||||||||  |||||  |||||||||||| |||||||||||||||||||    
T  19543109 aatcatgttaatcgggaacacaagacatcacatgaaggatcgagaatgtaaagattgaatttcaatagttcttagaaggtatttgaagacaatacaaagt 19543010  T
Q  130 gaagaaaattcatttcaagttcc 152  Q
    |||||||||||||||||||||||    
T  19543009 gaagaaaattcatttcaagttcc 19542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 33914565 - 33914397
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| ||||||| || ||||||||||| ||||||||||||||||||||| |||||  |||||| || | |||||  |||||||    
T  33914565 ttttgtagtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatatgaaggttgaa-ttcaatggttttaagaagaattttgaa 33914467  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    || ||| |||||| | |||||||||||||| | || || |||||| || |||||||||||||||||||||    
T  33914466 gataattcaaagtaaggaaaattcatttcaggctcttatgagtttccatacggaagaacgatcgaaaacg 33914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 12573407 - 12573575
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| |||| |||||  ||||||| || ||||||||||   ||  ||||| ||||||||||| | || |||||||||| ||||    
T  12573407 ttttgtagtgaggaatcatgtaaatcaacaaatgaagacattacgtgaaggatcaccaat--gaagaattgaagatcaaggtttgttagaaggttgttga 12573504  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||| ||||||||||||| ||||||||||| ||| | |||||||||||| ||  |||||||||||    
T  12573505 agacaatacacagtgaagaaaatttatttcaagttcatagaaattttcagacggaggattgatcgaaaacg 12573575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 13549871 - 13550039
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 115  Q
    ||||||||| ||||||||||| |||| |||||  ||||||| || ||||||||||   ||  ||||| ||||||||||| | || |||||||||| ||||    
T  13549871 ttttgtagtgaggaatcatgtaaatcaacaaatgaagacattacgtgaaggatcaccaat--gaagaattgaagatcaaggtttgttagaaggttgttga 13549968  T
Q  116 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||||| ||||||||||||| ||||||||||| ||| | |||||||||||| ||  |||||||||||    
T  13549969 agacaatacacagtgaagaaaatttatttcaagttcatagaaattttcagacggaggattgatcgaaaacg 13550039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 23908256 - 23908129
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| || || |||| ||||||||| |||||||||||||| ||||||||||| |||||||||| || |||||| |||||||||||||||||||| |    
T  23908256 aatcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaatt 23908157  T
Q  130 gaagaaaattcatttcaagttcctagga 157  Q
    |  ||||||||||| ||| |||| ||||    
T  23908156 ggggaaaattcattccaaattccaagga 23908129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 18474319 - 18474421
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||| |||||||||||| | ||| | |||||||||  |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18474319 caagacattacatgaaggatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagt 18474418  T
Q  150 tcc 152  Q
    |||    
T  18474419 tcc 18474421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 28422569 - 28422685
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || ||||||||  ||||||||| ||| ||||||| ||||||||  |||||||||||||||||| ||||||| | ||||||||| ||||||    
T  28422569 ttttgtagtgagaaatcatgtagatcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaatga-tgttagaaggtatttgaa 28422667  T
Q  117 gacaatacaaagtgaaga 134  Q
    ||||||||||||||||||    
T  28422668 gacaatacaaagtgaaga 28422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 11474963 - 11475083
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| ||||| |||| ||||||||||||||||||||| | ||||||| |||| ||||| |||| |||||||||| | ||||||    
T  11474963 ttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaa 11475062  T
Q  117 gacaatacaaagtgaagaaaa 137  Q
    |||||||||||||||| ||||    
T  11475063 gacaatacaaagtgaaaaaaa 11475083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 21017994 - 21018161
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||| | || |||||||| | || ||||| |||||||| || ||||||||||| |||||||| |||||||| ||||| ||  || ||  ||||||||    
T  21017994 ttttgtattgagaaatcatgtaattcaacaaatcaagacattacgtgaaggatcaatgatatgaa-attgaagaccaatggtttctataacttttttgaa 21018092  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
    || |||||||| ||||| ||||||||||||||||||||||| ||| || | |||||||||||| |||||    
T  21018093 gataatacaaaatgaaggaaattcatttcaagttcctaggaatttacaaatggaagaacgatcaaaaac 21018161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 5632540 - 5632406
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||| || ||  |  |||| ||||||||||| ||| | |||||| ||||| ||||||    
T  5632540 ttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacatggagaattgataatataaagattgaaga-caacggttcttataaggtatttgaa 5632442  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    || |||| ||| ||||||||||||||||||||||||    
T  5632441 gataataaaaattgaagaaaattcatttcaagttcc 5632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 21829098 - 21828996
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||| ||  | ||||| |||||||| ||||    
T  21829098 caagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaatataagttaaagaatattcattttaagt 21828999  T
Q  150 tcc 152  Q
    |||    
T  21828998 tcc 21828996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 2729571 - 2729454
Alignment:
Q  69 tcaaggatatgaagattgaagatcaatgattcttagaaggtttttg--aagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcaga 166  Q
    ||||||||||||| |||||||||||| || ||||| |||||||||   |||||||||||||||||| |||| ||||||||||||| ||||||  || |||    
T  2729571 tcaaggatatgaatattgaagatcaacgactcttaaaaggttttttttaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagaatttaga 2729472  T
Q  167 cggaagaacgatcgaaaa 184  Q
     | |||||||||||||||    
T  2729471 tgcaagaacgatcgaaaa 2729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 8402540 - 8402414
Alignment:
Q  27 aggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaa-ggtttttgaagacaataca 125  Q
    ||||||| ||| |||||| | | ||||||||||  ||||||||| ||||||||||||||||||| | ||| ||||| ||| ||| |||||||| |||| |    
T  8402540 aggaatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaagattgaagaactatggttcttcgaaaggtatttgaagaaaatata 8402441  T
Q  126 aagtgaagaaaattcatttcaagttcc 152  Q
    |||||||||| ||||||||||||||||    
T  8402440 aagtgaagaacattcatttcaagttcc 8402414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 19263693 - 19263573
Alignment:
Q  215 atgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgcaactgcgtttttctgcgggttaaagtcactctt 314  Q
    |||| |||||| |||||||| | ||||||||||| ||||||||||| |||||||  |||| |||||||| |||| |||||||| ||||||| |||||| |    
T  19263693 atgcaccactgtgcatgggaaaatgtttgccattacctcatgcgcaccctgcaccccaggtatgcgcaattgcgcttttctgcaggttaaaatcactcct 19263594  T
Q  315 tgcttgtttttcaagttggat 335  Q
    ||||| |||| |||| |||||    
T  19263593 tgcttattttccaagatggat 19263573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 26418849 - 26418961
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||  |||  |||||||| |||||||||||||||||||||||||| |||||  ||| |||||||||||||||| |||| |||||||| |    
T  26418849 aatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggtttttaaagaaaatacaaatt 26418948  T
Q  130 gaagaaaattcat 142  Q
    |  ||||||||||    
T  26418949 ggggaaaattcat 26418961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 19219000 - 19218880
Alignment:
Q  215 atgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgcaactgcgtttttctgcgggttaaagtcactctt 314  Q
    |||| |||||| |||||||  ||||||| |||||||||| ||| || |||||||   ||| ||||||| ||||| |||||||||||||||| ||||||||    
T  19219000 atgcaccactgtgcatggggaagtgttttccattgcctcttgcacaccctgcaccctaggtatgcgcagctgcgcttttctgcgggttaaaatcactctt 19218901  T
Q  315 tgcttgtttttcaagttggat 335  Q
    ||||| |||| |||| |||||    
T  19218900 tgcttattttccaagatggat 19218880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 25188906 - 25188983
Alignment:
Q  50 caagacatcacatgaaggatcaagga-tatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 126  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||||||| ||||||  |||||||| ||||||||||||    
T  25188906 caagacatcacaagaaggatcaaggaatatgaagaatgaatatcaatggttcttaagaggttttttaagacaatacaa 25188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 1602361 - 1602421
Alignment:
Q  410 atttgttctcaattgatgtagtctaccaatttgaatgaatgaatgtcgttgtgttagtcaa 470  Q
    |||||||||| |||||||  ||||| |||||||||||||||||||||||||| ||||||||    
T  1602361 atttgttctcgattgatgctgtctatcaatttgaatgaatgaatgtcgttgttttagtcaa 1602421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 13911407 - 13911541
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    |||||||||  ||||||||||||||||||||||||| ||  | |||| ||||||||||  |||| |||||||||| |  | ||| |||||||||||| ||    
T  13911407 caagacatcttatgaaggatcaaggatatgaagatt-aaattaaatggttcttagaagaattttcaagacaatacgatctaaag-aaattcatttcatgt 13911504  T
Q  150 tcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||| |||||||| || | |||||||| || |||||||    
T  13911505 tccaaggagtttccaaatggaagaacaattgaaaacg 13911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 30493218 - 30493132
Alignment:
Q  62 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaag 148  Q
    ||||||||| | |||||||||||| ||||| || | ||||||||||   ||||||||| ||| ||||||||||||||||||| ||||    
T  30493218 tgaaggatcgaagatatgaagattaaagattaacggttcttagaagacatttgaagacgatataaagtgaagaaaattcattgcaag 30493132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 33577866 - 33577934
Alignment:
Q  33 catgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattc 100  Q
    ||||| ||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  33577866 catgtaaatcggcaaagtaagacatcacatgaaggatcaaggtatatgaagaatgaagataaatgattc 33577934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 26297876 - 26297934
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaa 88  Q
    |||||||| ||||| |||| ||||||||||  ||||||||| |||||||||||||||||    
T  26297876 aatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaagattgaa 26297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 1618536 - 1618476
Alignment:
Q  410 atttgttctcaattgatgtagtctaccaatttgaatgaatgaatgtcgttgtgttagtcaa 470  Q
    ||||||| ||||| || | |||||| |||||||||||| ||||||||||||| ||||||||    
T  1618536 atttgttttcaatcgacgcagtctatcaatttgaatgagtgaatgtcgttgttttagtcaa 1618476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 26387810 - 26387723
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaa 137  Q
    ||||||||||  ||||||||||| |||||||| ||||||||| |||| ||||| | ||   ||| |||| ||||||||||||| ||||    
T  26387810 caagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttcttgggagacatttaaagagaatacaaagtgaaaaaaa 26387723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 9612082 - 9612046
Alignment:
Q  423 tgatgtagtctaccaatttgaatgaatgaatgtcgtt 459  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  9612082 tgatgtattctaccaatttgaatggatgaatgtcgtt 9612046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 26797233 - 26797189
Alignment:
Q  31 atcatgttaatcgacaaaccaagacatcacatgaaggatcaagga 75  Q
    ||||||| |||||||||| ||||||||||  ||||||||||||||    
T  26797233 atcatgtaaatcgacaaaacaagacatcaagtgaaggatcaagga 26797189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 101; Significance: 9e-50; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 21514 - 21658
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||    
T  21514 ttttgcagtgaggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaa 21613  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 161  Q
    ||||||||||||| ||||| ||||||||||||||  |||||||||    
T  21614 gacaatacaaagttaagaatattcatttcaagtttataggagttt 21658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 30 - 178
Target Start/End: Original strand, 6325 - 6472
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||| ||| |||||| |||||||||| ||||||||||    
T  6325 aatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcctagaagatttttgaagaaaatacaaagt 6423  T
Q  130 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 178  Q
    |||||||| ||| |||||||||||||||||||  ||| |||| ||||||    
T  6424 gaagaaaaatcaattcaagttcctaggagtttctagatggaaaaacgat 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 21781 - 21832
Alignment:
Q  298 gggttaaagtcactctttgcttgtttttcaagttggatcggtagaaaaagcc 349  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  21781 gggttaaaatcactctttgcttgtttttcaagctggatcggtggaaaaagcc 21832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 5765 - 5600
Alignment:
Q  19 ttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaaga 118  Q
    ||||||| || |||||||| ||| ||||||  |||||||||||||||||||| |||||||||||||||||  |||||| |||||||||||| ||| ||||    
T  5765 ttgtagtgagaaatcatgtaaattgacaaataaagacatcacatgaaggatcgaggatatgaagattgaat-tcaatggttcttagaaggtctttaaaga 5667  T
Q  119 caatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 185  Q
     |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  5666 aaatacaaagtgaagaaaattcaattcaagtttgtaggagttttcagacggaagaacgatcgaaaac 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 26949 - 26795
Alignment:
Q  21 gtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagaca 120  Q
    ||||| || |||||||| ||||||||||  |||||||||| |||| ||||||||||||||| ||||||| |||||| ||||||||| ||| |||||||||    
T  26949 gtagtgagaaatcatgtaaatcgacaaattaagacatcacgtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagaca 26850  T
Q  121 atacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 175  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| | |||||||    
T  26849 atacaaagtgaagaaaattcgtttcaagttcataggagttttcaggctgaagaac 26795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 86; Significance: 8e-41; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 8707 - 8538
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||||| || ||| || ||||  |||  | |||| ||||||||||||    
T  8707 ttttgtagtgaggaatcatgtaaatcgacaaatcaagacataaaatgaaggatcaaggaaataaagtttaaagacaaatattccttaaaaggtttttgaa 8608  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    ||||||||||  ||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  8607 gacaatacaagatgaaggaaattcatttcgagttcctaggaattttcaaacggaagaacgatcgaaaacg 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 11746 - 11631
Alignment:
Q  68 atcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagac 167  Q
    ||||||||||| |||| |||| || |||  |||||||||||||||||||| |||| |||  ||| |||| |||||||| ||||||||||| ||| |||||    
T  11746 atcaaggatattaagaatgaatataaatagttcttagaaggtttttgaagtcaatgcaagatgacgaaagttcatttcgagttcctaggaatttccagac 11647  T
Q  168 ggaagaacgatcgaaa 183  Q
    ||||||||||||||||    
T  11646 ggaagaacgatcgaaa 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 13069 - 13013
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaag 73  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13069 ttttgtagtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaag 13013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 22578 - 22443
Alignment:
Q  50 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 149  Q
    ||||||||||| ||||| |||||||||||||||| ||||| |||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  22578 caagacatcacgtgaagaatcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaatacaaggtgaagaaaattcatttcaagt 22480  T
Q  150 tcctaggagttttcagacggaagaacgatcgaaaacg 186  Q
    |||||||| ||| |||| ||||||||||| |||||||    
T  22479 tcctaggattttccagagggaagaacgattgaaaacg 22443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 228184 - 228050
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    |||| |||| || |||||||| |||||||||| ||||||||||| ||||||||| ||  |||||| |||||||| ||||| |||||||||||| ||||||    
T  228184 ttttatagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga-caatggttcttagaaggtatttgaa 228086  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||||||||||||||||||||||||||||||    
T  228085 gacaatacaaagtgaagaaaattcatttcaagttcc 228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 7799 - 7903
Alignment:
Q  81 agattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcg 180  Q
    |||||||||  ||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7799 agattgaaggccaatggttcttagaaggttgttgaagacagtacaaagtcaagaaaattcatttcaagttcctaggagttttcagacggaagaatgatcg 7898  T
Q  181 aaaac 185  Q
    |||||    
T  7899 aaaac 7903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 11683 - 11564
Alignment:
Q  30 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 129  Q
    |||||||| |||||||||| ||||||||||  | ||||||  || || ||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  11683 aatcatgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaagt 11584  T
Q  130 gaagaaaattcatttcaagt 149  Q
    ||||||||||||||||||||    
T  11583 gaagaaaattcatttcaagt 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 12361 - 12495
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||||||| |||||||||| ||||||||||| ||||||||  | ||||||||||| ||||| ||||| || ||||||| ||| ||||    
T  12361 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaagatcgaaga-caatggttgttagaagttttatgaa 12459  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    || |||||||||||||||||||| ||||||||||||    
T  12460 gaaaatacaaagtgaagaaaatttatttcaagttcc 12495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 1925 - 2059
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||||||| || |||| ||| |||| ||||| ||||||||||| ||||||||  | ||||||||||||||||| ||||| || ||||||| ||| ||||    
T  1925 ttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaagttttatgaa 2023  T
Q  117 gacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    || |||||||||||||||||||| ||||||||||||    
T  2024 gaaaatacaaagtgaagaaaatttatttcaagttcc 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 1957 - 2038
Alignment:
Q  70 caaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    ||||||||| || ||| |||| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1957 caaggatataaatattcaaga-caatggttcttatatggtttttgaagacaatacaaagtaaagaaaattcatttcaagttcc 2038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 447093 - 447219
Alignment:
Q  17 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 116  Q
    ||||| ||| ||||||||||| ||||   ||| ||||||||||  |||||||||||||||   || ||||||||||||   ||||||  |||||  ||||    
T  447093 ttttgaagtgaggaatcatgtaaatcattaaatcaagacatcatgtgaaggatcaaggatgaaaa-attgaagatcaaaagttcttaacaggttactgaa 447191  T
Q  117 gacaatacaaagtgaagaaaattcattt 144  Q
    ||||||||||||||||||||||| ||||    
T  447192 gacaatacaaagtgaagaaaattgattt 447219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 2684 - 2751
Alignment:
Q  85 tgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 152  Q
    |||||||||||| |||||| |||   ||||||||||||||| ||||||||||| |||||||| |||||    
T  2684 tgaagatcaatggttcttataagacatttgaagacaatacagagtgaagaaaactcatttcatgttcc 2751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 58898 - 59000
Alignment:
Q  53 gacatcacatgaaggatcaaggatatgaagattgaag----atcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaag 148  Q
    |||||||||||||||||| || |||||||||||||||    ||  ||| |||||| ||  | |||||||||||| |||| ||||| |||||||||| |||    
T  58898 gacatcacatgaaggatcgagaatatgaagattgaagtttaatatatggttcttaaaatatatttgaagacaatgcaaaatgaag-aaattcatttaaag 58996  T
Q  149 ttcc 152  Q
    ||||    
T  58997 ttcc 59000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 1734 - 1701
Alignment:
Q  111 tttgaagacaatacaaagtgaagaaaattcattt 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  1734 tttgatgacaatacaaagtgaagaaaattcattt 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 2818 - 2851
Alignment:
Q  111 tttgaagacaatacaaagtgaagaaaattcattt 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  2818 tttgatgacaatacaaagtgaagaaaattcattt 2851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University