View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8607_low_5 (Length: 308)

Name: NF8607_low_5
Description: NF8607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8607_low_5
NF8607_low_5
[»] chr2 (42 HSPs)
chr2 (9-295)||(2062870-2063154)
chr2 (108-264)||(16959994-16960150)
chr2 (123-264)||(22885061-22885202)
chr2 (105-264)||(33788542-33788701)
chr2 (127-264)||(15126342-15126479)
chr2 (114-264)||(27739987-27740137)
chr2 (117-264)||(4471935-4472081)
chr2 (118-264)||(25504831-25504978)
chr2 (122-254)||(3745356-3745489)
chr2 (118-254)||(27880054-27880188)
chr2 (130-264)||(10173512-10173647)
chr2 (150-246)||(16952337-16952434)
chr2 (150-246)||(17023002-17023099)
chr2 (150-246)||(17060308-17060405)
chr2 (133-261)||(18681080-18681208)
chr2 (133-264)||(31902352-31902483)
chr2 (146-264)||(14405210-14405330)
chr2 (123-208)||(43816384-43816469)
chr2 (191-264)||(1269495-1269568)
chr2 (175-246)||(17079199-17079271)
chr2 (136-255)||(7695984-7696102)
chr2 (106-264)||(29487143-29487301)
chr2 (136-246)||(34230231-34230341)
chr2 (193-264)||(39338863-39338934)
chr2 (192-264)||(7874303-7874375)
chr2 (133-210)||(12793669-12793745)
chr2 (136-264)||(13337286-13337414)
chr2 (136-261)||(37770583-37770707)
chr2 (150-261)||(915408-915518)
chr2 (191-264)||(14106520-14106593)
chr2 (133-221)||(20572130-20572218)
chr2 (192-264)||(387185-387257)
chr2 (216-264)||(4162041-4162089)
chr2 (192-264)||(5254268-5254340)
chr2 (224-264)||(10524109-10524149)
chr2 (224-264)||(23650397-23650437)
chr2 (205-264)||(36276182-36276240)
chr2 (227-261)||(9560820-9560854)
chr2 (137-195)||(29044778-29044836)
chr2 (9-96)||(4472117-4472206)
chr2 (258-294)||(14566410-14566446)
chr2 (136-226)||(41086738-41086826)
[»] chr5 (26 HSPs)
chr5 (117-264)||(22675246-22675393)
chr5 (107-264)||(27713081-27713238)
chr5 (122-264)||(39184112-39184256)
chr5 (118-264)||(8730929-8731076)
chr5 (136-264)||(13954175-13954303)
chr5 (118-252)||(24072190-24072323)
chr5 (150-246)||(8297498-8297594)
chr5 (133-254)||(31721699-31721820)
chr5 (136-264)||(14302371-14302499)
chr5 (193-264)||(698373-698444)
chr5 (137-264)||(7391979-7392100)
chr5 (136-261)||(21402778-21402903)
chr5 (136-264)||(7195181-7195308)
chr5 (165-264)||(34378110-34378210)
chr5 (104-264)||(23426356-23426505)
chr5 (191-264)||(25992019-25992092)
chr5 (191-264)||(26045960-26046033)
chr5 (130-261)||(17854001-17854133)
chr5 (197-251)||(39024452-39024506)
chr5 (175-264)||(33258862-33258951)
chr5 (194-252)||(18593267-18593325)
chr5 (216-264)||(29087493-29087541)
chr5 (175-259)||(25658131-25658217)
chr5 (11-96)||(39183985-39184071)
chr5 (25-93)||(17853870-17853937)
chr5 (41-93)||(31742377-31742428)
[»] chr1 (36 HSPs)
chr1 (25-252)||(50589023-50589264)
chr1 (9-264)||(19598648-19598921)
chr1 (105-264)||(42374175-42374335)
chr1 (104-264)||(17033598-17033760)
chr1 (117-295)||(19598598-19598795)
chr1 (133-264)||(4651792-4651922)
chr1 (122-264)||(38544664-38544807)
chr1 (136-254)||(27102213-27102331)
chr1 (140-265)||(34774882-34775007)
chr1 (136-264)||(6583157-6583285)
chr1 (150-264)||(24658941-24659057)
chr1 (192-264)||(46814464-46814536)
chr1 (193-264)||(31585758-31585829)
chr1 (193-264)||(41920464-41920535)
chr1 (193-264)||(46692817-46692888)
chr1 (193-254)||(5389419-5389480)
chr1 (150-264)||(27031793-27031909)
chr1 (191-246)||(10785455-10785510)
chr1 (192-264)||(7857665-7857737)
chr1 (151-262)||(32864517-32864628)
chr1 (193-264)||(30685902-30685973)
chr1 (152-261)||(40933878-40933987)
chr1 (150-264)||(27905424-27905533)
chr1 (134-213)||(2988058-2988138)
chr1 (150-264)||(24684431-24684547)
chr1 (132-208)||(28395026-28395103)
chr1 (223-264)||(30655572-30655613)
chr1 (224-264)||(5459173-5459213)
chr1 (190-246)||(16147585-16147641)
chr1 (213-252)||(9313307-9313346)
chr1 (210-264)||(46603404-46603458)
chr1 (223-264)||(15840940-15840981)
chr1 (227-264)||(38564913-38564950)
chr1 (195-259)||(9081506-9081569)
chr1 (9-92)||(38548856-38548941)
chr1 (223-263)||(42374049-42374089)
[»] chr7 (44 HSPs)
chr7 (117-264)||(48058576-48058723)
chr7 (122-264)||(47456949-47457091)
chr7 (115-264)||(13311851-13312000)
chr7 (119-264)||(11379052-11379196)
chr7 (119-264)||(9428030-9428174)
chr7 (132-261)||(12480901-12481031)
chr7 (133-264)||(46133214-46133347)
chr7 (133-264)||(38485568-38485698)
chr7 (136-261)||(3478367-3478492)
chr7 (150-264)||(6584921-6585037)
chr7 (136-264)||(6716678-6716805)
chr7 (127-251)||(22568043-22568168)
chr7 (150-264)||(34389974-34390090)
chr7 (136-264)||(42533194-42533321)
chr7 (136-263)||(8745166-8745293)
chr7 (193-264)||(47325883-47325954)
chr7 (150-264)||(41089701-41089817)
chr7 (136-261)||(24324738-24324864)
chr7 (146-264)||(1320806-1320925)
chr7 (193-261)||(3419654-3419722)
chr7 (193-264)||(38306273-38306344)
chr7 (193-263)||(10244195-10244265)
chr7 (190-264)||(23983207-23983281)
chr7 (192-252)||(35745824-35745884)
chr7 (193-264)||(9349761-9349832)
chr7 (145-260)||(26386125-26386240)
chr7 (146-261)||(3867131-3867248)
chr7 (191-264)||(16954665-16954739)
chr7 (150-246)||(36449113-36449210)
chr7 (10-96)||(47456819-47456909)
chr7 (193-260)||(5860286-5860353)
chr7 (206-264)||(1820013-1820071)
chr7 (207-253)||(33435132-33435178)
chr7 (118-203)||(9107234-9107319)
chr7 (227-264)||(27993568-27993605)
chr7 (193-246)||(37795019-37795072)
chr7 (110-158)||(12546322-12546370)
chr7 (50-96)||(9107355-9107401)
chr7 (191-252)||(16828931-16828993)
chr7 (216-269)||(17802837-17802890)
chr7 (231-264)||(25153232-25153265)
chr7 (193-254)||(44353562-44353623)
chr7 (227-264)||(46262151-46262188)
chr7 (224-264)||(25160827-25160867)
[»] chr4 (41 HSPs)
chr4 (99-264)||(12296187-12296352)
chr4 (117-253)||(28966890-28967026)
chr4 (117-264)||(38929839-38929986)
chr4 (136-264)||(35800501-35800629)
chr4 (108-231)||(21983734-21983857)
chr4 (151-261)||(16501746-16501858)
chr4 (123-264)||(46698712-46698854)
chr4 (136-264)||(53823362-53823490)
chr4 (191-264)||(25753184-25753257)
chr4 (129-252)||(41117901-41118024)
chr4 (175-264)||(19673113-19673201)
chr4 (191-264)||(22811156-22811229)
chr4 (136-264)||(19815161-19815293)
chr4 (147-264)||(24740054-24740172)
chr4 (136-264)||(38637174-38637301)
chr4 (140-262)||(39420958-39421080)
chr4 (183-264)||(6599932-6600014)
chr4 (150-264)||(21387159-21387273)
chr4 (132-221)||(43374031-43374120)
chr4 (132-254)||(43077000-43077126)
chr4 (175-264)||(8255039-8255129)
chr4 (175-264)||(8268457-8268547)
chr4 (23-96)||(38930021-38930094)
chr4 (191-264)||(49747539-49747612)
chr4 (136-264)||(2061679-2061807)
chr4 (193-264)||(4305737-4305808)
chr4 (192-247)||(35341335-35341390)
chr4 (9-96)||(12296370-12296460)
chr4 (42-96)||(21983654-21983708)
chr4 (192-260)||(2825799-2825867)
chr4 (192-264)||(31050659-31050731)
chr4 (25-97)||(46487465-46487536)
chr4 (191-247)||(48098362-48098418)
chr4 (258-295)||(21988007-21988045)
chr4 (207-253)||(30167576-30167622)
chr4 (197-263)||(30964454-30964520)
chr4 (258-295)||(38929789-38929827)
chr4 (191-252)||(16833017-16833078)
chr4 (207-264)||(36962628-36962684)
chr4 (223-264)||(39041302-39041343)
chr4 (227-264)||(40813813-40813850)
[»] chr3 (30 HSPs)
chr3 (109-260)||(47945722-47945873)
chr3 (126-264)||(5556582-5556721)
chr3 (132-259)||(1652823-1652950)
chr3 (133-264)||(27398970-27399102)
chr3 (138-264)||(33143891-33144018)
chr3 (136-254)||(823375-823494)
chr3 (132-261)||(30935326-30935456)
chr3 (150-264)||(43012387-43012503)
chr3 (192-264)||(19176514-19176586)
chr3 (118-252)||(25594454-25594577)
chr3 (193-264)||(17550969-17551040)
chr3 (157-264)||(9584013-9584122)
chr3 (150-261)||(23328303-23328416)
chr3 (191-261)||(37123397-37123467)
chr3 (192-261)||(39021273-39021342)
chr3 (166-264)||(40023541-40023641)
chr3 (191-264)||(14193952-14194027)
chr3 (192-264)||(45398808-45398880)
chr3 (136-264)||(14879447-14879576)
chr3 (132-236)||(38488835-38488940)
chr3 (193-262)||(2392504-2392573)
chr3 (9-96)||(25594328-25594417)
chr3 (206-264)||(30127274-30127333)
chr3 (191-264)||(14755260-14755334)
chr3 (197-262)||(2394255-2394320)
chr3 (193-246)||(20611813-20611866)
chr3 (124-237)||(46358315-46358428)
chr3 (224-264)||(34475783-34475823)
chr3 (227-264)||(20710740-20710777)
chr3 (223-264)||(31424248-31424289)
[»] chr8 (23 HSPs)
chr8 (91-264)||(15906698-15906872)
chr8 (99-261)||(17720610-17720771)
chr8 (132-264)||(30236064-30236197)
chr8 (133-264)||(35062469-35062600)
chr8 (136-253)||(17656943-17657060)
chr8 (140-253)||(41791209-41791322)
chr8 (133-264)||(10552280-10552410)
chr8 (136-261)||(10248494-10248619)
chr8 (175-252)||(32945683-32945760)
chr8 (193-264)||(24995393-24995464)
chr8 (157-264)||(32066256-32066364)
chr8 (148-264)||(15821330-15821448)
chr8 (197-264)||(31207364-31207431)
chr8 (190-264)||(12198064-12198138)
chr8 (190-264)||(12442492-12442566)
chr8 (192-264)||(36630849-36630921)
chr8 (193-264)||(9519511-9519582)
chr8 (193-264)||(34389003-34389074)
chr8 (193-254)||(16457459-16457520)
chr8 (193-264)||(37986856-37986927)
chr8 (193-264)||(41893399-41893469)
chr8 (28-96)||(15906882-15906949)
chr8 (193-254)||(20138448-20138509)
[»] scaffold0499 (1 HSPs)
scaffold0499 (107-264)||(6570-6727)
[»] chr6 (18 HSPs)
chr6 (132-264)||(9224053-9224186)
chr6 (107-253)||(13098483-13098629)
chr6 (132-264)||(26534652-26534788)
chr6 (136-264)||(26215960-26216088)
chr6 (132-262)||(21266127-21266257)
chr6 (136-264)||(32935280-32935408)
chr6 (111-252)||(33968531-33968670)
chr6 (136-260)||(13423482-13423606)
chr6 (136-254)||(20701744-20701862)
chr6 (151-259)||(21265003-21265111)
chr6 (193-261)||(3117508-3117576)
chr6 (116-254)||(15944041-15944178)
chr6 (136-221)||(15120538-15120623)
chr6 (230-261)||(20499934-20499965)
chr6 (230-264)||(7546464-7546498)
chr6 (223-261)||(34105428-34105466)
chr6 (190-247)||(12794144-12794201)
chr6 (130-166)||(16180837-16180873)
[»] scaffold1613 (1 HSPs)
scaffold1613 (122-264)||(943-1086)
[»] scaffold0200 (1 HSPs)
scaffold0200 (136-264)||(19395-19523)
[»] scaffold0119 (1 HSPs)
scaffold0119 (191-264)||(42134-42207)
[»] scaffold0063 (1 HSPs)
scaffold0063 (175-261)||(58142-58228)
[»] scaffold0050 (1 HSPs)
scaffold0050 (150-252)||(36731-36835)
[»] scaffold0068 (1 HSPs)
scaffold0068 (193-264)||(35770-35840)
[»] scaffold0620 (1 HSPs)
scaffold0620 (223-264)||(3842-3883)


Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 9 - 295
Target Start/End: Complemental strand, 2063154 - 2062870
Alignment:
Q  9 acatcaccacctaaaaactccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataaatcactctgtcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2063154 acatcaccacctaaaaactccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataaatcactctgtcc 2063055  T
Q  109 gcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa 208  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2063054 gcatcgcctaagctgagccactatt--aaagatcaatcagtttccacaacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa 2062957  T
Q  209 cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagacgggcaccccttaccccggtccaccagagaat 295  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2062956 cttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagacgggcaccccttaccccggtccaccagagaat 2062870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 16960150 - 16959994
Alignment:
Q  108 cgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaa 207  Q
    |||||| |||| | ||||||| ||||| ||||| ||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  16960150 cgcatcacctacgctgagccattattccaaagaacaatcaacttccaccagctcacaacctctggtccaccgaaagaacaccaaataagcccaaaaccaa 16960051  T
Q  208 acttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  16960050 acttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagac 16959994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 123 - 264
Target Start/End: Original strand, 22885061 - 22885202
Alignment:
Q  123 gagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagag 222  Q
    |||||||||||||| ||||||||||  |||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||     
T  22885061 gagccactattctatagatcaatcaacttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaacccaaaaccaaacttgaaccaaagaa 22885160  T
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  22885161 ctgactcccgatctcgaatcaaaagtgatcggcccaccagac 22885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 33788542 - 33788701
Alignment:
Q  105 gtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaac 204  Q
    |||| |||| |||||| |||||||||| |||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| | |||||| |    
T  33788542 gtcctcatcacctaagctgagccactaatctatagatcaatcagcttccaccacctctcaacctctggttcaccgaaagaacaccaaaacaacccaaagc 33788641  T
Q  205 caaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  33788642 caaacctgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagac 33788701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 127 - 264
Target Start/End: Original strand, 15126342 - 15126479
Alignment:
Q  127 cactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctga 226  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||||||||| ||||||||||| | ||    
T  15126342 cactattctaaagatcaataagtttccaccacctcacaacctccggaccaccgaaagaacaccataaaagcccaaaaccaaacatgagccaaagaaccga 15126441  T
Q  227 ctcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||  |||||| |||||||||    
T  15126442 ctcccgatctcgaatcaaaaatgatcggcccaccagac 15126479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 27740137 - 27739987
Alignment:
Q  114 gcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttga 213  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||    
T  27740137 gcctaagttgagccactattccatagatcaatcagtttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaacccaagaccaaacttga 27740038  T
Q  214 gccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
     || ||   ||||||| |||||| ||||||||||||||||| |||||||||    
T  27740037 accgaaacactgactctcgatcttgaatcaaaagcgatcggcccaccagac 27739987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 117 - 264
Target Start/End: Complemental strand, 4472081 - 4471935
Alignment:
Q  117 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 216  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    ||||| ||| |||| |||||||||||| ||||||||||| |||||||||  |    
T  4472081 taagttgagccactattctaaagatcaatcagcttctaccacct-ttgacctccggtccaccaaaagaacaccaataaagcccaaaaacaaacttgaatc 4471983  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  4471982 aaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagac 4471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 264
Target Start/End: Original strand, 25504831 - 25504978
Alignment:
Q  118 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacc-aaacttgagcc 216  Q
    |||||||||| |||||||||| |||||| || ||||||||||||  |||||  ||| || |||||||||||||||||||||||||||| |||| ||| ||    
T  25504831 aagttgagccgctattctaaatatcaattagcttccaccacctctgaaccttcggtccatcgaaagaacaccaaaaaagcccaaaaccaaaacctgaacc 25504930  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  25504931 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagac 25504978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 3745489 - 3745356
Alignment:
Q  122 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagccc-aaaaccaaacttgagccaaag 220  Q
    |||||||||||||||||||||||||||  |||||||| |   |||||||| | ||||||||||||| ||||||||||| ||||| |||||| | ||||||    
T  3745489 tgagccactattctaaagatcaatcagcctccaccacttttaaacctctgatccaccgaaagaacaacaaaaaagcccaaaaacaaaacttaaaccaaag 3745390  T
Q  221 agctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    | |||||| |||||||||||| ||||||||||||    
T  3745389 aactgacttccgatctcgaattaaaagcgatcgg 3745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 254
Target Start/End: Original strand, 27880054 - 27880188
Alignment:
Q  118 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcca 217  Q
    ||||||||||| |||||| |||||||||||| || ||||||||| || |||| ||| ||||||||||||| ||||| |||||||| |||||||||| |||    
T  27880054 aagttgagccattattctcaagatcaatcagctttcaccacctctcatcctccggt-caccgaaagaacaacaaaacagcccaaa-ccaaacttgaacca 27880151  T
Q  218 aagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    || | |||||| ||||||||||||||||| |||||||    
T  27880152 aataactgacttccgatctcgaatcaaaatcgatcgg 27880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 130 - 264
Target Start/End: Original strand, 10173512 - 10173647
Alignment:
Q  130 tattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaa-aaaagcccaaaaccaaacttgagccaaagagctgact 228  Q
    ||||| |||||||| |||  |||||||||||| | ||||| | | ||||||||||||||||| |||||||||||||||||||||||||||| | || |||    
T  10173512 tattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaacaccaacaaaagcccaaaaccaaacttgagccaaataacttact 10173611  T
Q  229 cccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
     |||||||||||||||||| |||||| |||| ||||    
T  10173612 tccgatctcgaatcaaaagtgatcggcccactagac 10173647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 16952337 - 16952434
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16952337 ttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 16952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 17023002 - 17023099
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17023002 ttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 17060308 - 17060405
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17060308 ttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17060405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 18681208 - 18681080
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    ||||||||||| |||| || |||||||   ||||||||| | |||| || |||||||| |||||||||||||||||||||| ||| ||| ||||||||||    
T  18681208 tctaaagatcattcagctttcaccaccgtgcaacctctgatccaccaaaggaacaccacaaaagcccaaaaccaaacttgaaccagagaactgactcccg 18681109  T
Q  233 atctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||||| || ||||| ||||||    
T  18681108 atctcgaatcaaatgcaatcggcccacca 18681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 264
Target Start/End: Original strand, 31902352 - 31902483
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    ||||||||||| |||| |||| ||||| | ||||||| ||| |||| || ||||| |||| |||| ||||||||||||||| ||| ||| ||||||||||    
T  31902352 tctaaagatcattcagcttcccccaccacgcaacctccggtccaccaaaggaacatcaaataagctcaaaaccaaacttgaaccagagaactgactcccg 31902451  T
Q  233 atctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||| ||||||||| || |||||||||    
T  31902452 atctcgaattaaaagcgattggcccaccagac 31902483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 14405330 - 14405210
Alignment:
Q  146 cagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatca 243  Q
    |||||||||| ||| | | || |||| | |||||||||| ||| |||  ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  14405330 cagtttccacaaccactcgacttctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatca 14405231  T
Q  244 aaagcgatcggtccaccagac 264  Q
    |||| |||||| |||||||||    
T  14405230 aaagtgatcggcccaccagac 14405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 43816384 - 43816469
Alignment:
Q  123 gagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa 208  Q
    ||||||||||||||||||||||||||  ||||||||||   |||||||||| ||||||||||| ||||||||||||||||||||||    
T  43816384 gagccactattctaaagatcaatcagcctccaccacctttaaacctctggtccaccgaaagaataccaaaaaagcccaaaaccaaa 43816469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 1269568 - 1269495
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  1269568 aaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 1269495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 17079271 - 17079199
Alignment:
Q  175 caccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17079271 caccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17079199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 7696102 - 7695984
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||||| |||| |||||||||||| | ||||  | | ||||||||||| |||  |||||||||||||| ||||||||||||||| |||||||||| |     
T  7696102 aaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaa-accgtaaaagcccaaaacctaacttgagccaaagaactgactcccggta 7696004  T
Q  236 tcgaatcaaaagcgatcggt 255  Q
    |||||||||||| |||||||    
T  7696003 tcgaatcaaaagtgatcggt 7695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 264
Target Start/End: Complemental strand, 29487301 - 29487143
Alignment:
Q  106 tccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagccc-aaaac 204  Q
    |||||| | ||||||  |||||||||||| |   ||||||||| |||||||||| |||||||||||||  |||||||||||| || || ||||| |||||    
T  29487301 tccgcaactcctaagccgagccactattccatgaatcaatcagcttccaccaccacacaacctctggtcaaccgaaagaacatcataacagcccaaaaac 29487202  T
Q  205 caaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||| || |||| ||||||  | ||||||||||||||||||| || |||||||||    
T  29487201 caaacatgaaccgaagaactgactatcaatctcgaatcaaaagcgattgg-ccaccagac 29487143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 34230341 - 34230231
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||| |||| |||||||||||| ||||||| | | ||||||||||| |||| ||||||||||||| ||||||||| ||||||| |||||||| |||    
T  34230341 aaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaa-accacaaaaagcccaaaatcaaacttgatccaaagaactgactcctgat 34230243  T
Q  235 ctcgaatcaaaa 246  Q
    ||||||| ||||    
T  34230242 ctcgaataaaaa 34230231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 39338863 - 39338934
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  39338863 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagac 39338934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 7874375 - 7874303
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  7874375 aaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagac 7874303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 12793669 - 12793745
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaact 210  Q
    ||||||||||| |||| |||||||||| ||||||||| ||| || |||| |||||||| |||||||||||||||||||    
T  12793669 tctaaagatcattcagcttccaccaccgcacaacctccggtcca-cgaaggaacaccataaaagcccaaaaccaaact 12793745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 13337414 - 13337286
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||| ||||| | ||||||||| | |||||   | ||||||||||| |||| |||||| |||||||| |||||||| |||||| |||||| |||||    
T  13337414 aaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaa-accataaaaagtccaaaacctaacttgagtcaaagaactgacttccgat 13337316  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
     |||||||||||| |||||| ||| |||||    
T  13337315 ttcgaatcaaaagtgatcggcccatcagac 13337286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 37770583 - 37770707
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||||| |||| ||||| |||||| | ||||| | | ||||||||||| |||| ||||||||||||||||| |||| | |||||  ||||||| ||||    
T  37770583 aaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaa-accataaaagcccaaaaccaaaattgatctaaagaattgactcctgatc 37770681  T
Q  236 tcgaatcaaaagcgatcggtccacca 261  Q
      |||||||||| |||||| ||||||    
T  37770682 cagaatcaaaagtgatcggcccacca 37770707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 915408 - 915518
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 249  Q
    |||||||||| | ||||||| ||| ||||||||||| || |||||   ||||||||||||||||  |||| | ||||||  |||||||||||||||||||    
T  915408 ttccaccaccgcgcaacctccggtgcaccgaaagaatactaaaaagctccaaaaccaaacttgaatcaaa-aactgactttcgatctcgaatcaaaagcg 915506  T
Q  250 atcggtccacca 261  Q
    ||| | ||||||    
T  915507 atcagcccacca 915518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 14106520 - 14106593
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| || |||||||||  ||| | |||||||||||||||||||| |||||||||| |||||| |||||||||    
T  14106520 aaaaacccaaaaaccaaaactgatctaaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagac 14106593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 20572218 - 20572130
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaaga 221  Q
    ||||||||||  |||||||| | || ||| |||| |||| | ||||||||||||||||||||| ||||||| ||||||| || ||||||    
T  20572218 tctaaagatcgttcagtttcaagcatctctcaacttctgatccaccgaaagaacaccaaaaaaacccaaaatcaaacttaagtcaaaga 20572130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 387257 - 387185
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||| ||||| | |||||||| ||||||  |||||||||||||| ||||||||| |||| | |||||||||    
T  387257 aaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagac 387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 4162041 - 4162089
Alignment:
Q  216 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  4162041 caaaaagctggctcccgatctcgaatcaaaagtgatcggcccaccagac 4162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 5254340 - 5254268
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| ||| | ||||||| ||||||||| ||||||||||||| ||| ||||| |||||| |||| ||||    
T  5254340 aaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagac 5254268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 10524149 - 10524109
Alignment:
Q  224 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 10524109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 23650437 - 23650397
Alignment:
Q  224 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  23650437 tgactcccgatctcgaatcaaaagcgatcagcccaccagac 23650397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 36276182 - 36276240
Alignment:
Q  205 caaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| | | |||||||||    
T  36276182 caaacttgagtcaaagat-tgactcccgatctcgaatcaaaagcgaacagcccaccagac 36276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 9560820 - 9560854
Alignment:
Q  227 ctcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||||||||||||| |||||||||||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccacca 9560854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 29044778 - 29044836
Alignment:
Q  137 aagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa 195  Q
    |||||||| |||  ||||||||  ||||||||||||| ||||||||||||||| |||||    
T  29044778 aagatcaaacagcctccaccactgcacaacctctggtccaccgaaagaacacctaaaaa 29044836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 4472206 - 4472117
Alignment:
Q  9 acatcaccacctaaaa---actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    ||||||||||||||||   | ||||| |||||| ||||||||||||| || ||||||||||||   || |||||||  |||||||||||||    
T  4472206 acatcaccacctaaaatagagtcctttaagaaatgaccactgaaaaa-cgttatccataaccaccaatcgccactagacaacccaaaataa 4472117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 14566446 - 14566410
Alignment:
Q  258 accagacgggcaccccttaccccggtccaccagagaa 294  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  14566446 accagacgggcacccctaaccccagtccaccagagaa 14566410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 41086738 - 41086826
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctga 226  Q
    |||||||| |||| |||||||||||| | ||||| | | ||||||||| | |||| ||||||||||||||||||||  | ||||||||||||    
T  41086738 aaagatcattcagcttccaccacctctcgacctccgatccaccgaaagga-accataaaaagcccaaaaccaaact--atccaaagagctga 41086826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 22675246 - 22675393
Alignment:
Q  117 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 216  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||  ||| ||||||||||||  ||||||||||||||||||||||||    
T  22675246 taagttgagccactagtctaaagatcaatcaacttccaccacctcacaacctccggaccactgaaagaacaccattaaagcccaaaaccaaacttgagcc 22675345  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  22675346 aaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagac 22675393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 264
Target Start/End: Complemental strand, 27713238 - 27713081
Alignment:
Q  107 ccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacca 206  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |  ||||||||||||| || |||||||||||||||    
T  27713238 ccgcatcccataagttgagccactattctaaagatcaataagtttccaccacctgacaacctctagaccaccgaaagaacaacataaaagcccaaaacca 27713139  T
Q  207 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||| |||| ||||    
T  27713138 aacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagac 27713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 39184112 - 39184256
Alignment:
Q  122 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa--cttgagccaaa 219  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  39184112 tgagccactattcaaaagatcaatcagcttccactacctcacaacctctggtccaccgaaagaacaccaaaaaagctcaaaaccaaatgcttgaaccaaa 39184211  T
Q  220 gagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    || |||||| |||||||||||||||||| |||||| |||||||||    
T  39184212 gaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 39184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 264
Target Start/End: Complemental strand, 8731076 - 8730929
Alignment:
Q  118 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacc-aaacttgagcc 216  Q
    |||||||||| |||||||||| |||||| || ||||||||||||  |||||  ||| || |||||||||||||||||||||||||||| |||| ||| ||    
T  8731076 aagttgagccgctattctaaatatcaattagcttccaccacctctgaaccttcggtccatcgaaagaacaccaaaaaagcccaaaaccaaaacctgaacc 8730977  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  8730976 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagac 8730929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 13954175 - 13954303
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||||||||||||||||||||  |||| || | | ||||||||||| |||| ||||||||||||||||||||||||||||||   |||||||||||    
T  13954175 aaagatcaatcagtttccaccacctttcaacttccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgat 13954273  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| |||||| |||||||||    
T  13954274 ctcgaatcaaaagtgatcggcccaccagac 13954303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 24072190 - 24072323
Alignment:
Q  118 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcca 217  Q
    |||||||| |||||||||||||| || ||||  || |||||||  ||||||| ||| ||||||||||||||||||||| ||| ||| | ||||||| |||    
T  24072190 aagttgagtcactattctaaagaccattcagcatcaaccacctttcaacctccggtccaccgaaagaacaccaaaaaaaccccaaatc-aacttgaacca 24072288  T
Q  218 aagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    |||| |||||| |||||||| ||||||||||||||    
T  24072289 aagaactgacttccgatctcaaatcaaaagcgatc 24072323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 8297594 - 8297498
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    |||||||||||||| ||||| | | ||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8297594 ttccaccacctcacgacctccgattcaccgaaagaa-accataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 8297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 31721820 - 31721699
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    |||||||||||||||  |||||||||| | |||| || ||| ||| ||| ||||||||||| | ||||||||||||  ||| ||| ||| ||||||||||    
T  31721820 tctaaagatcaatcaacttccaccaccgcgcaacatccggtccactgaaggaacaccaaaacaacccaaaaccaaaaatgaaccagagaactgactcccg 31721721  T
Q  233 atctcgaatcaaaagcgatcgg 254  Q
    ||||||||||||||||||||||    
T  31721720 atctcgaatcaaaagcgatcgg 31721699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 14302371 - 14302499
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||  ||| |||||||||||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||||  ||||||| ||||||||| ||    
T  14302371 aaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgctccaaagaactgactcccaat 14302469  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||| |||||| |||| |||||||||||    
T  14302470 ctcgaaccaaaagtgatcagtccaccagac 14302499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 698444 - 698373
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  698444 aaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagac 698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 7391979 - 7392100
Alignment:
Q  137 aagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatct 236  Q
    |||||||||| | ||| |||||||| | ||||| | | ||||||||||| |||| ||||||||||||||||      |||||||| ||||||||||||||    
T  7391979 aagatcaatccgcttcaaccacctctcgacctccgatccaccgaaagaa-accataaaagcccaaaaccaat-----gccaaagaactgactcccgatct 7392072  T
Q  237 cgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| ||||||||||||||||    
T  7392073 cgaatcaaaagtgatcggtccaccagac 7392100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 21402778 - 21402903
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||||||  |||||||||||| |||||||   | ||||||||||| |||| ||||||| ||||||||||| |||| |||||| ||||||||||||    
T  21402778 aaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaa-accataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgat 21402876  T
Q  235 ctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||  ||||| |||||| ||||||    
T  21402877 ctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 7195181 - 7195308
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||| | |||| |||||| ||||| | ||||| | | |||||||| || |||| |||||||||||  | ||||||||||||||| |||||||||||||    
T  7195181 aaagattattcagcttccacgacctctcgacctccgatccaccgaaaaaa-accataaaagcccaaactctaacttgagccaaagaactgactcccgatc 7195279  T
Q  236 tcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| ||||||  ||||||||    
T  7195280 tcgaatcaaaagtgatcggctcaccagac 7195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 34378210 - 34378110
Alignment:
Q  165 acctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 263  Q
    ||||| ||| |||||||||| ||| ||| ||||||||||| | |||||| | |||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  34378210 acctccggtccaccgaaagagcacaaaacaaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 34378111  T
Q  264 c 264  Q
    |    
T  34378110 c 34378110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 23426505 - 23426356
Alignment:
Q  104 tgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaa 203  Q
    |||||||| | |||||| |||||||| |||| |  |||||||||| |||||||||| ||||||||||||| |||||||| |           ||||||||    
T  23426505 tgtccgcaactcctaagctgagccacaattccatggatcaatcagcttccaccaccacacaacctctggtccaccgaaata-----------gcccaaaa 23426417  T
Q  204 ccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||  | |||| ||||||||| ||||||||||||||| | ||||||||||||||    
T  23426416 ccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagac 23426356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 25992092 - 25992019
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||| || |||| ||||| ||||||| ||||||||||||||||||||| || |||||||||    
T  25992092 aaaaagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccaccagac 25992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 26045960 - 26046033
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||| ||||||||||||||||||||||   || |||||||||||||||||||||| ||||||| ||||||||    
T  26045960 aaaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagac 26046033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 17854001 - 17854133
Alignment:
Q  130 tattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgact 228  Q
    |||||||||||||| |||  |||||||||||| |||| || ||| |||||||||||||  |||| |||||||||    ||||||| ||||| |  |||||    
T  17854001 tattctaaagatcattcaacttccaccacctctcaacttcaggtccaccgaaagaacattaaaataagcccaaagtagaacttgaaccaaataattgact 17854100  T
Q  229 cccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||| ||||||||| |||| ||||||    
T  17854101 cccgatctcgagtcaaaagcggtcggcccacca 17854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 39024452 - 39024506
Alignment:
Q  197 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgat 251  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  39024452 cccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgat 39024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 264
Target Start/End: Original strand, 33258862 - 33258951
Alignment:
Q  175 caccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| |||| |||||||||||| |||| || || ||||||| || ||||| |||||||||||||||| |||||| |||||||||    
T  33258862 caccgaaagaa-accataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagac 33258951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 18593325 - 18593267
Alignment:
Q  194 aagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    |||||||||| | |||||||| |||||| || |||||||||||||||||||||| ||||    
T  18593325 aagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatc 18593267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 29087541 - 29087493
Alignment:
Q  216 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||| |||||||| |||||||||||||||| |||| |||||||||||    
T  29087541 caaagaactgactcctgatctcgaatcaaaagggatcagtccaccagac 29087493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 25658131 - 25658217
Alignment:
Q  175 caccgaaagaacaccaaaaa-agcccaaaaccaaa-cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccac 259  Q
    |||||||||||||||| ||| |||||||||| ||| |||||   ||||| |||||||||  ||| ||||||||||||||||| ||||    
T  25658131 caccgaaagaacaccataaatagcccaaaacaaaaacttgaattaaagaactgactcccagtctagaatcaaaagcgatcggcccac 25658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 39183985 - 39184071
Alignment:
Q  11 atcaccacctaaaa---actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    ||||||||||||||   ||||  ||| ||||||||||||| ||||||| |||||||||||| |||| ||||||||| | ||||||||||    
T  39183985 atcaccacctaaaacagactctatcacgaaacgaccactg-aaaaacggtatccataacca-acatcgccactacttatcccaaaataa 39184071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 17853870 - 17853937
Alignment:
Q  25 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaa 93  Q
    ||||||| | ||||||| ||||||||| ||||||||||||||||  |||  |||||||||| |||||||    
T  17853870 actcctttacgaaacgatcactgaaaa-acgatatccataaccacccatcaccactactcaccccaaaa 17853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 31742428 - 31742377
Alignment:
Q  41 accactgaaaaaacgatatccataaccatacattgccactactcaacccaaaa 93  Q
    ||||||||||||||||||||||||| ||  ||| ||||||||||| |||||||    
T  31742428 accactgaaaaaacgatatccataa-cacccatcgccactactcaccccaaaa 31742377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 50589023 - 50589264
Alignment:
Q  25 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaa-----------taaat----cactctgtccg 109  Q
    |||||| |||||| ||||||| |||||| ||||||||||||||   |||||||||||||||||||||||           |||||    ||||| ||| |    
T  50589023 actcctacaagaaccgaccaccgaaaaa-cgatatccataacctcccattgccactactcaacccaaaaataaccccctctaaatgaaacactccgtctg 50589121  T
Q  110 catcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaac 209  Q
    |||| |||||||||||| ||||||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  50589122 catcacctaagttgagctactattccaaagatcaatcaacttctaccacctcacaacctctggtccaccgaaagaacactaaataagcccaaaaccaaac 50589221  T
Q  210 ttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    ||| |||||||| ||| |||||||| |||||||||||||||||    
T  50589222 ttgggccaaagaactggctcccgatttcgaatcaaaagcgatc 50589264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 264
Target Start/End: Complemental strand, 19598921 - 19598648
Alignment:
Q  9 acatcaccacctaaaaac----tccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaata--------- 95  Q
    |||||||||||||||||     ||||||| ||||| |||||| ||||||| | |||||||||||| ||| |||||||||||||||||||||             
T  19598921 acatcaccacctaaaaatagattccttcacgaaaccaccact-aaaaaacaaaatccataaccatccatcgccactactcaacccaaaataacccccctc 19598823  T
Q  96 ------aatcactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc 189  Q
          || ||||||  ||| ||| | |||||||||||  ||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||||||    
T  19598822 taaaagaaacactctagccgtatcccataagttgagccgttattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacacc 19598723  T
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    | |||| ||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  19598722 ataaaaacccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagac 19598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 42374335 - 42374175
Alignment:
Q  105 gtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaac 204  Q
    |||| |||| || ||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||  |||||||||| ||||| |||||||||||    
T  42374335 gtcctcatcaccaaagttgagccactattctaaagatcaatcagcttccaccacctctcaatctccggtatgccgaaagaacgccaaacaagcccaaaac 42374236  T
Q  205 c-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    | |||||||| |||||   ||||||||||||||| ||||||||||||||||||||||||||    
T  42374235 caaaacttgaaccaaaagactgactcccgatctcaaatcaaaagcgatcggtccaccagac 42374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 17033760 - 17033598
Alignment:
Q  104 tgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacac-caaaaaagcccaaa 202  Q
    ||||| |||| || ||||||||||| ||||||||||||||||||| || || ||||||| |||||| ||  | ||||||||||||  |||||||||||||    
T  17033760 tgtcctcatcaccaaagttgagccattattctaaagatcaatcagcttgcatcacctcataacctcaggatcgccgaaagaacacaaaaaaaagcccaaa 17033661  T
Q  203 acc-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||| |||||||| ||||||| ||||||||||||||||| ||||||| |||||| |||||||||    
T  17033660 accaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagac 17033598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 19598795 - 19598598
Alignment:
Q  117 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 216  Q
    |||||||||||  ||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||||||| |||| ||||||| |||||||||| |    
T  19598795 taagttgagccgttattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacaccataaaaacccaaaatcaaacttgagtc 19598696  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac------------------gggcaccccttaccc-cggtccaccagagaat 295  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||                  ||||||||||||||| ||||||||||||||||    
T  19598695 aaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccagacgggcaccccttaccctcggtccaccagagaat 19598598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 264
Target Start/End: Complemental strand, 4651922 - 4651792
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    ||||||||||| |||| |||||||||| | ||||||| ||| ||||||| |||||||||||||||||||||||||||| || ||| ||| ||||||||||    
T  4651922 tctaaagatcattcagcttccaccaccgcgcaacctccggtccaccgaaggaacaccaaaaaagcccaaaaccaaactagaaccagaga-ctgactcccg 4651824  T
Q  233 atctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||| |||||| || ||||||    
T  4651823 atctcgaatcaaaagtgatcggccccccagac 4651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 38544664 - 38544807
Alignment:
Q  122 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaag 220  Q
    ||||||||||||||||||||||||||  ||||||||| ||  || ||| | | || ||| ||||||| |||||| | |||||||||| ||| | ||||||    
T  38544664 tgagccactattctaaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacactaaaaaacctcaaaaccaaaacttaaaccaaag 38544763  T
Q  221 agctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    | |||||||||||||||||||||||||||||||| |||||||||    
T  38544764 aactgactcccgatctcgaatcaaaagcgatcggcccaccagac 38544807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 27102331 - 27102213
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||||| |||| |||||||||||| | ||||| | | |||||||||||  |  ||||||||||||||||||||||| ||||||| |||||||||||||    
T  27102331 aaagatcattcagcttccaccacctctcgacctccgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatc 27102232  T
Q  236 tcgaatcaaaagcgatcgg 254  Q
    |||||||||||| ||||||    
T  27102231 tcgaatcaaaagtgatcgg 27102213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 34775007 - 34774882
Alignment:
Q  140 atcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagcc-aaagagctgactcccgatctc 237  Q
    ||||||||| |||||||||||| |||||||   | ||||||||||| |||| |||||||||||||| ||||||||||| ||| | |||||||||||||||    
T  34775007 atcaatcagcttccaccacctctcaacctccaattcaccgaaagaa-accataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctc 34774909  T
Q  238 gaatcaaaagcgatcggtccaccagacg 265  Q
    | |||||||| |||||||||||||||||    
T  34774908 g-atcaaaagtgatcggtccaccagacg 34774882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 6583157 - 6583285
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||||||| |||||||||||| | ||||| | | ||||||||||| |||| |||||||  |||||||||  ||| |||||||  ||||| |||||    
T  6583157 aaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaa-accataaaaagcaaaaaaccaaaactgatccaaagaattgactgccgat 6583255  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| ||||||||||||||||    
T  6583256 ctcgaatcaaaagtgatcggtccaccagac 6583285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 24659057 - 24658941
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  24659057 ttccacaacctctcgacctccgatccaccgaaagagcacaaaaccaaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaag 24658958  T
Q  248 cgatcggtccaccagac 264  Q
     ||| || |||||||||    
T  24658957 tgattggcccaccagac 24658941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 46814464 - 46814536
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  46814464 aaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagac 46814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 31585758 - 31585829
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  31585758 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 31585829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 41920535 - 41920464
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  41920535 aaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 41920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 46692817 - 46692888
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||| |||||| |||||||||    
T  46692817 aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagac 46692888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 5389419 - 5389480
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  5389419 aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg 5389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 27031793 - 27031909
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| ||||||| | | |||||||||| ||| |||  ||| ||| ||| | ||||||||||||||||||||||| |||||||||||||||||    
T  27031793 ttccacaacctctcaacctccgatccaccgaaagagcacaaaacaaaatccctaaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaag 27031892  T
Q  248 cgatcggtccaccagac 264  Q
     |||||| |||| ||||    
T  27031893 tgatcggcccactagac 27031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 10785455 - 10785510
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  10785455 aaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagcaaaa 10785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 7857737 - 7857665
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| |||||| | ||||| ||| |||||| |||||||||||||||||||||||| |||||| |||||||||    
T  7857737 aaaaggccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagac 7857665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 32864517 - 32864628
Alignment:
Q  151 tccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 249  Q
    ||||||||||| | ||||||| | |||  |||||| |||| |||||||||||||||||||||||| |||||| | |||| |||||||||||| ||||| |    
T  32864517 tccaccacctcccgacctctgatccacaaaaagaa-accataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtg 32864615  T
Q  250 atcggtccaccag 262  Q
    || || |||||||    
T  32864616 attggcccaccag 32864628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 30685902 - 30685973
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||| ||||||||| |||||| |||| ||||    
T  30685902 aaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagac 30685973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 40933987 - 40933878
Alignment:
Q  152 ccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcga 250  Q
    |||||||||| |||||||| || || ||||| |||||||||||| |  ||||| |||| |||| ||||| | |||||| |||||||| ||||||||||||    
T  40933987 ccaccacctctcaacctctagtccatcgaaa-aacaccaaaaaaagttcaaaatcaaaattgaaccaaataactgacttccgatctcaaatcaaaagcga 40933889  T
Q  251 tcggtccacca 261  Q
    ||||| |||||    
T  40933888 tcggttcacca 40933878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 27905533 - 27905424
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 249  Q
    |||||||||||| ||||||| ||| ||||||||  |||||| |   ||||||||| |||| |||  |||||| || ||| | |||||||||||||||| |    
T  27905533 ttccaccacctctcaacctccggtccaccgaaa--acaccata---gcccaaaacaaaacatgaatcaaagaactaacttctgatctcgaatcaaaagtg 27905439  T
Q  250 atcggtccaccagac 264  Q
    |||||||||||||||    
T  27905438 atcggtccaccagac 27905424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 2988058 - 2988138
Alignment:
Q  134 ctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttga 213  Q
    |||||||||| |||| |||||||||| ||||||||| |||  | |||| ||||||| |||||||||||||| |||||||||    
T  2988058 ctaaagatcattcagcttccaccaccgcacaacctccggtctatcgaaggaacaccaaaaaaagcccaaaatcaaacttga 2988138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 24684431 - 24684547
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||||||||| | |||| ||| |||||| |||||  |||||||||||| |||||    
T  24684431 ttccacaacctcgcgacctccgatccaccgaaagagcacaaaacaaaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaag 24684530  T
Q  248 cgatcggtccaccagac 264  Q
     |||||| |||||||||    
T  24684531 tgatcggcccaccagac 24684547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 28395026 - 28395103
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaa-aaaagcccaaaaccaaa 208  Q
    |||||||||||| |||  |||||||| | ||||||||| ||| |||| ||||| |||||| |||||||||||||||||    
T  28395026 ttctaaagatcattcaccttccaccaacccacaacctccggtccaccaaaagagcaccaataaaagcccaaaaccaaa 28395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 30655613 - 30655572
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  30655613 ctgactcccgatctcgaatcaaaagcgatcggcccactagac 30655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 5459213 - 5459173
Alignment:
Q  224 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  5459213 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 5459173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 16147641 - 16147585
Alignment:
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||||| | |||||||||    
T  16147641 aaaaaagtccaaaatcaaacttgacccaaagaactgactcccgatattgaatcaaaa 16147585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 9313307 - 9313346
Alignment:
Q  213 agccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  9313307 agccaaagaactgactcccgatctcgaatcaaaagtgatc 9313346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 46603458 - 46603404
Alignment:
Q  210 ttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||| ||||||| ||||||| ||||||||||||||||||||  || |||||||||    
T  46603458 ttgaaccaaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagac 46603404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 15840940 - 15840981
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||||||| |||| | |||||||||    
T  15840940 ctgactcccgatctcgaatcaaaagtgatcagcccaccagac 15840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 38564950 - 38564913
Alignment:
Q  227 ctcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagac 38564913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 9081506 - 9081569
Alignment:
Q  195 agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccac 259  Q
    ||||||||| ||||||||| | ||||  ||| ||||||||||||||||||||| ||||| |||||    
T  9081506 agcccaaaagcaaacttga-ctaaagcactggctcccgatctcgaatcaaaagtgatcgatccac 9081569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 38548856 - 38548941
Alignment:
Q  9 acatcaccacctaaaa---actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaa 92  Q
    ||||||||||||||||   |||| |||| ||||||| ||||||||| ||||||| ||||||||  ||| | ||||||||| ||||||    
T  38548856 acatcaccacctaaaacagactctttcacgaaacgatcactgaaaa-acgatattcataaccacccatcgtcactactcatcccaaa 38548941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 42374089 - 42374049
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccaga 263  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  42374089 ctgactcccgatctcgaatcaaaagtaaccggtccaccaga 42374049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 48058576 - 48058723
Alignment:
Q  117 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |  ||||||||||||| || ||||| |||||||||||||||||||    
T  48058576 taagttgagccactattctaaagatcaatcagcttccaccacctcacaacctccagaccaccgaaagaacaacataaaaggccaaaaccaaacttgagcc 48058675  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||| | |||||| |||||||| |||||||||||||||  |||||||||    
T  48058676 aaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagac 48058723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 47456949 - 47457091
Alignment:
Q  122 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaaga 221  Q
    |||| ||||||||||||||||||| || ||||||||||||||||| || ||  |||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  47456949 tgagtcactattctaaagatcaattagcttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaaga 47457048  T
Q  222 gctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
     ||||||||| ||||| |||||||||||||||||||| |||||    
T  47457049 actgactcccaatctcaaatcaaaagcgatcggtccatcagac 47457091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 264
Target Start/End: Complemental strand, 13312000 - 13311851
Alignment:
Q  115 cctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgag 214  Q
    |||||| |||| |||||||||||| ||||||||| | |||||||||| |||||||| || || ||||||||| |||||| ||||||| ||| |||||||     
T  13312000 cctaagctgagacactattctaaatatcaatcagctcccaccacctctcaacctctagtccatcgaaagaacgccaaaacagcccaacacctaacttgaa 13311901  T
Q  215 ccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  13311900 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 13311851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 119 - 264
Target Start/End: Original strand, 11379052 - 11379196
Alignment:
Q  119 agttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagcca 217  Q
    |||||||||| |||||||||||||||||||  ||||||||||   ||||||||||  |||  |||||||||||||||||||||||||||| ||||| |||    
T  11379052 agttgagccattattctaaagatcaatcagcctccaccacctataaacctctggtcaacc--aagaacaccaaaaaagcccaaaaccaaaacttgaacca 11379149  T
Q  218 aagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||  ||||||||||||||||||||||||||||||||  ||||||||    
T  11379150 aagtactgactcccgatctcgaatcaaaagcgatcggctcaccagac 11379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 119 - 264
Target Start/End: Original strand, 9428030 - 9428174
Alignment:
Q  119 agttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaa 218  Q
    |||||||||||||||| | |||||||| || ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||| || || |    
T  9428030 agttgagccactattccatagatcaat-agcttccaccacttcacaacctctggtccaccgaaagaacaccaaaacagcccaagaccaaactagaaccga 9428128  T
Q  219 agagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||| |||||| | |||||||||||||||| ||||||  ||||||||    
T  9428129 agaactgacttctgatctcgaatcaaaagtgatcggctcaccagac 9428174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 12481031 - 12480901
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagccaaagagctgactcc 230  Q
    ||||||| ||||||||   ||||||||| ||||| |||  || ||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||    
T  12481031 ttctaaaaatcaatcatcctccaccaccgcacaatctccagtccaccgaaagaacacctaaaaaagccaaaaaccaaacttgaaccaaagaactgactcc 12480932  T
Q  231 cgatctcgaatcaaaagcgatcggtccacca 261  Q
    |||||||||||||||||||||||| ||||||    
T  12480931 cgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 264
Target Start/End: Original strand, 46133214 - 46133347
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaa-ccaaacttgagccaaagagctgactcc 230  Q
    |||||||||||||||| |||| ||||| | ||||||| ||| ||||||| ||||||||||||| |||||||| |||||||||| ||| ||| ||||||||    
T  46133214 tctaaagatcaatcagcttcccccaccacgcaacctccggtccaccgaaggaacaccaaaaaaagcccaaaaaccaaacttgaaccagagaactgactcc 46133313  T
Q  231 cgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||| ||||||||||||||||  ||||||||    
T  46133314 cgatctcaaatcaaaagcgatcggctcaccagac 46133347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 264
Target Start/End: Complemental strand, 38485698 - 38485568
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    ||||||||||| |||| ||||||||||   ||||||| ||| || |||| |||||||||||||||||||||||||||| || ||| | | ||||||||||    
T  38485698 tctaaagatcattcagcttccaccaccgtgcaacctccggtccatcgaaggaacaccaaaaaagcccaaaaccaaactagaaccagata-ctgactcccg 38485600  T
Q  233 atctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||| |||||| |||||||||    
T  38485599 atctcgaatcaaaagtgatcggcccaccagac 38485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 261
Target Start/End: Complemental strand, 3478492 - 3478367
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||||| |||| |||| ||||||| | | ||| | | ||||||||||||||||| |||||||||||| || ||||||||||||| || ||||||||||    
T  3478492 aaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacaccaacaaagcccaaaactaatcttgagccaaagaactaactcccgatc 3478393  T
Q  236 tcgaatcaaaagcgatcggtccacca 261  Q
    |||||||||||| |||||| ||||||    
T  3478392 tcgaatcaaaagtgatcggcccacca 3478367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 6585037 - 6584921
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| ||||||| | | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  6585037 ttccacaacctctcaacctccgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaag 6584938  T
Q  248 cgatcggtccaccagac 264  Q
     |||||| |||||||||    
T  6584937 tgatcggcccaccagac 6584921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 6716678 - 6716805
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||||||| |||||||||||| | || || | | ||||||||||| |||| ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  6716678 aaagatcaatcagcttccaccacctctcgacttc-gatccaccgaaagaa-accataaaaaacccaagaccaaacttgagccaaagaactgactcccgat 6716775  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| |||||| | |||||||    
T  6716776 ctcgaatcaaaagtgatcggccaaccagac 6716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 22568043 - 22568168
Alignment:
Q  127 cactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagccaaagagctg 225  Q
    ||||||||||||||||||||||||| ||||||||| ||||||  ||| | ||||||||||||| |||||| || ||| | |||||||| ||||| | ||     
T  22568043 cactattctaaagatcaatcagttttcaccacctctcaaccttcggtccgccgaaagaacacctaaaaaatccaaaatcaaaacttgaaccaaaaaacta 22568142  T
Q  226 actcccgatctcgaatcaaaagcgat 251  Q
    |||||||||| |||||||||||||||    
T  22568143 actcccgatcacgaatcaaaagcgat 22568168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 34390090 - 34389974
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  34390090 ttccacaacctctcgacctccgatccaccgaaagagcacaaaataaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaag 34389991  T
Q  248 cgatcggtccaccagac 264  Q
     |||||| |||||||||    
T  34389990 tgatcggcccaccagac 34389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 42533194 - 42533321
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||  |||||| |||||||||||| ||||||| | ||||||||||| |||| |||||||||||| |||||||| ||||||||   |||||||||||    
T  42533194 aaagatcgttcagttgccaccacctcacgacctctgatccaccgaaagaa-accataaaaagcccaaa-ccaaacttaagccaaaggattgactcccgat 42533291  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| |||| | |||||||||    
T  42533292 ctcgaatcaaaagtgatcagcccaccagac 42533321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 8745293 - 8745166
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||  ||| |||||| ||||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||||| |||| || |||| |||||||    
T  8745293 aaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgatccaacgaactgaatcccgat 8745195  T
Q  235 ctcgaatcaaaagcgatcggtccaccaga 263  Q
    ||||||||||||| |||||| ||||||||    
T  8745194 ctcgaatcaaaagtgatcggcccaccaga 8745166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 47325883 - 47325954
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47325883 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagac 47325954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 41089701 - 41089817
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||| ||||| | |||||||| |||||||||||||||| |||||||||||||||    
T  41089701 ttccacaacctcgcgacctccgatccaccgaaagatcacaaaacaaaagctcaaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaag 41089800  T
Q  248 cgatcggtccaccagac 264  Q
     ||||||||||||||||    
T  41089801 tgatcggtccaccagac 41089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 24324738 - 24324864
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccga 233  Q
    |||||||| |||| |||||||||| | | ||||| | | |||| |||||| |||| |||||||||||||||||| |||||||||||||  ||||||||||    
T  24324738 aaagatcattcagcttccaccacccctcgacctccgatccacctaaagaa-accataaaaagcccaaaaccaaaacttgagccaaagaattgactcccga 24324836  T
Q  234 tctcgaatcaaaagcgatcggtccacca 261  Q
    |||||||||||||  |||||| ||||||    
T  24324837 tctcgaatcaaaattgatcggcccacca 24324864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 1320925 - 1320806
Alignment:
Q  146 cagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccgatctcgaatca 243  Q
    ||||| ||||| |||| | ||||| | | ||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||    
T  1320925 cagttgccaccccctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaaacttgagccaaagaactgacttccgattttgaatca 1320827  T
Q  244 aaagcgatcggtccaccagac 264  Q
    |||| |||||| |||||||||    
T  1320826 aaagtgatcggcccaccagac 1320806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 3419654 - 3419722
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||| | ||||||    
T  3419654 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccacca 3419722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 38306344 - 38306273
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||| ||||||||||||||| |||||| |||||||||    
T  38306344 aaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagac 38306273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 10244265 - 10244195
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 263  Q
    |||| |||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  10244265 aaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 10244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 23983281 - 23983207
Alignment:
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||| ||||||||||||||||||| || ||  ||||||||||||||||||||||| ||||||  |||||||||    
T  23983281 aaaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagac 23983207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 35745824 - 35745884
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    |||||||||||| | |||||||||||||||| ||||| |||||||||||||||||| ||||    
T  35745824 aaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatc 35745884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 9349832 - 9349761
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| ||||||||| ||  |||  |||||||||||||||||||||||| |||||| |||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagac 9349761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 26386125 - 26386240
Alignment:
Q  145 tcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaa 244  Q
    ||||||||||||||||| || | || ||| || |||||||||||||||  |||| ||| | ||||||||    |||| |  |||||||||||||||||||    
T  26386125 tcagtttccaccacctctcatcatccggtccatcgaaagaacaccaaattagcctaaatcaaaacttgaattgaagaacgaactcccgatctcgaatcaa 26386224  T
Q  245 aagcgatcggtccacc 260  Q
    |||||||||| |||||    
T  26386225 aagcgatcggaccacc 26386240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 3867248 - 3867131
Alignment:
Q  146 cagtttccaccacctcacaacctctggtacaccgaaagaacaccaa--aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatca 243  Q
    |||||||||  ||||| | ||||||| | ||||| |||| ||| ||  |||||||||||| | |||||||| |||||| |||||||||| ||||||||||    
T  3867248 cagtttccataacctcgcgacctctgatccaccgcaagagcacaaagcaaaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatca 3867149  T
Q  244 aaagcgatcggtccacca 261  Q
    |||| |||| | ||||||    
T  3867148 aaagtgatcagcccacca 3867131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 16954739 - 16954665
Alignment:
Q  191 aaaaagcccaaaacc-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||| ||||||||| |||||| ||||||  |||||||||| |||||| |||||||| |||||||    
T  16954739 aaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagac 16954665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 36449210 - 36449113
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    |||||||||||| ||||||| | | ||||||||||| ||||||| ||| |||||||  ||||||| ||||||| ||||||||  ||||||||| ||||    
T  36449210 ttccaccacctctcaacctccgatccaccgaaagaaaaccaaaataagtccaaaacataacttgaaccaaagaactgactcctaatctcgaataaaaa 36449113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 47456819 - 47456909
Alignment:
Q  10 catcaccacctaaaaact----ccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    |||||||||||||||||     |||||| ||||| |||||||||||||| | |||||||||||   |||||||| ||||||||||||||||    
T  47456819 catcaccacctaaaaacagaccccttcacgaaaccaccactgaaaaaacaaaatccataaccaccaattgccaccactcaacccaaaataa 47456909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 5860286 - 5860353
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacc 260  Q
    ||||||||||| | |||||| | ||||||  |||||||||||||||||||||||||||| || |||||    
T  5860286 aaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccacc 5860353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 1820013 - 1820071
Alignment:
Q  206 aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||  ||||||  |||||||| |||||||||||||| |||||||||||||||||    
T  1820013 aaacttgaatcaaagatttgactccctatctcgaatcaaaatcgatcggtccaccagac 1820071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 33435178 - 33435132
Alignment:
Q  207 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcg 253  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcg 33435132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 9107319 - 9107234
Alignment:
Q  118 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaa 203  Q
    |||||||||||||||||||||| |||  ||   ||||||||||| |||||||     |||||||||||||| ||||||||||||||    
T  9107319 aagttgagccactattctaaagttcacccaacatccaccacctctcaacctccttcccaccgaaagaacacaaaaaaagcccaaaa 9107234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 27993568 - 27993605
Alignment:
Q  227 ctcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagac 27993605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 37795072 - 37795019
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    ||||||||||| | |||||||  |||||| ||||||||||||||||||||||||    
T  37795072 aaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaa 37795019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 12546322 - 12546370
Alignment:
Q  110 catcgcctaagttgagccactattctaaagatcaatcagtttccaccac 158  Q
    |||| |||||| ||||||||||||||||||||||||||  |||||||||    
T  12546322 catcacctaagctgagccactattctaaagatcaatcaacttccaccac 12546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 9107401 - 9107355
Alignment:
Q  50 aaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  9107401 aaaacgatatccataaccacccatcgccactactcatcccaaaataa 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 16828931 - 16828993
Alignment:
Q  191 aaaaagcccaaaacc-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    ||||||||||||||| ||||||||| |||||| ||||||  |||||||||| |||||| ||||    
T  16828931 aaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatc 16828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 17802837 - 17802890
Alignment:
Q  216 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagacgggca 269  Q
    |||| ||||| || |||||||||||||||||| |||||| ||||||||| ||||    
T  17802837 caaaaagctggcttccgatctcgaatcaaaagtgatcggcccaccagaccggca 17802890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 25153265 - 25153232
Alignment:
Q  231 cgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||| ||||||||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagac 25153232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 44353562 - 44353623
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    ||||||||||| | ||| | || |||||| ||||||||||||||| ||||||||| ||||||    
T  44353562 aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 46262151 - 46262188
Alignment:
Q  227 ctcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagac 46262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 25160867 - 25160827
Alignment:
Q  224 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagac 25160827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 12296352 - 12296187
Alignment:
Q  99 cactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcc 198  Q
    ||||| |||| |||| ||||||||||||||||| |||||||| ||| ||| |||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  12296352 cactccgtcctcatcacctaagttgagccactactctaaagaacaaccagcttccaccaccacacaacctccggtccaccgaaagaacaccaaaaaagcc 12296253  T
Q  199 caaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||| ||||||| ||||||   |||||||||||||||||| ||||  ||||||||    
T  12296252 caaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagac 12296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 28967026 - 28966890
Alignment:
Q  117 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 216  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| ||  ||||||||||||| |  |||||||||||||||||||||||||    
T  28967026 taagatgagccactattctagagatcaatcagcttccaccacctcacaacctccggaccaccgaaagaacatcctaaaagcccaaaaccaaacttgagcc 28966927  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcg 253  Q
    ||||| ||||||||| |||||||||||||| ||||||    
T  28966926 aaagaactgactcccaatctcgaatcaaaaacgatcg 28966890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 117 - 264
Target Start/End: Complemental strand, 38929986 - 38929839
Alignment:
Q  117 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 216  Q
    |||||||||  ||||||| ||||||||||||  |||||||||||||||||||| ||  |||||||||||||||| |||||||||||| ||||||||||||    
T  38929986 taagttgagtgactattccaaagatcaatcaacttccaccacctcacaacctccggatcaccgaaagaacaccataaaagcccaaaatcaaacttgagcc 38929887  T
Q  217 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| |||||||  |||||||||||||||| |||||| ||| |||||    
T  38929886 aaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagac 38929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 35800629 - 35800501
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||||| |||| |||||||||| |  |||||| ||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||| ||||||    
T  35800629 aaagatcattcaggttccaccaccgcgaaacctccggtccaccgaaagaacaccaaaaaagcccaaaaccaaactggaatcaaagaactgacttccgatc 35800530  T
Q  236 tcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||| ||||||||    
T  35800529 tcgaatcaaaagcgatcggttcaccagac 35800501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 21983734 - 21983857
Alignment:
Q  108 cgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaa 207  Q
    |||||| |||||| |||| |||||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||||||| ||||||||| ||| ||    
T  21983734 cgcatcccctaagctgagtcactattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacaccataaaagcccataactaa 21983833  T
Q  208 acttgagccaaagagctgactccc 231  Q
    |||||||||||||| |||||||||    
T  21983834 acttgagccaaagaactgactccc 21983857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 16501858 - 16501746
Alignment:
Q  151 tccaccacctcacaacctctggtacaccgaaagaa-cacc-aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagc 248  Q
    ||||||||| ||||| ||| ||| ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  16501858 tccaccaccgcacaatctccggtccaccgaaagaaacacctaaaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagc 16501759  T
Q  249 gatcggtccacca 261  Q
    |||||| ||||||    
T  16501758 gatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 264
Target Start/End: Original strand, 46698712 - 46698854
Alignment:
Q  123 gagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaaga 221  Q
    ||||||||||||||||||| |||||| ||||||||| |   ||||||   |  |||||||||||||| ||| ||||||||| |||| ||||| |||||||    
T  46698712 gagccactattctaaagatgaatcagcttccaccacttttaaacctccaatctaccgaaagaacacctaaacagcccaaaaacaaaacttgaaccaaaga 46698811  T
Q  222 gctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
     |||||||||||||||||||||||||| ||||| |||||||||    
T  46698812 actgactcccgatctcgaatcaaaagcaatcggcccaccagac 46698854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 53823362 - 53823490
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||||||  |||||||||||| | ||||  | |  |||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  53823362 aaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaa-accataaaaaacccaaaaccaaacttgagccaaagaactgactcccgat 53823460  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| ||| ||||||||||||    
T  53823461 ctcgaatcaaaagtgattggtccaccagac 53823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 25753257 - 25753184
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||    
T  25753257 aaaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagac 25753184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 41117901 - 41118024
Alignment:
Q  129 ctattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgac 227  Q
    |||||| |||||||| |||| |||||||||||| | ||||||| | || |||||||| |||| ||||||||||||||| || |||||||||||| || ||    
T  41117901 ctattcgaaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaa-accataaaaagcccaaaacctaatttgagccaaagaacttac 41117999  T
Q  228 tcccgatctcgaatcaaaagcgatc 252  Q
    | |||||||||||||||||| ||||    
T  41118000 ttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 19673201 - 19673113
Alignment:
Q  175 caccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||| |||||||||| ||||| ||  ||||||||||||    
T  19673201 caccgaaagaacaccaacaaaacccaaaactaaacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagac 19673113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 22811156 - 22811229
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||  |||||| |||||||||    
T  22811156 aaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagac 22811229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 19815161 - 19815293
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaac----caaacttgagccaaagagctgactccc 231  Q
    |||||||| | || |||||||| ||| | ||||| ||| |||||||||||||||||  || ||||||||     |||||||||||||||| ||||||||     
T  19815161 aaagatcatttagcttccaccatctctcgacctccggtccaccgaaagaacaccaatcaaacccaaaactaattaaacttgagccaaagaactgactcct 19815260  T
Q  232 gatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||| |||||  |||||||||||||||    
T  19815261 gatctcgaataaaaagtaatcggtccaccagac 19815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 24740054 - 24740172
Alignment:
Q  147 agtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaa-agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaa 245  Q
    |||||| |||||| ||||||||| | | ||| ||||||||  |||||| |||||||||||||| |||| ||||| | |||||||||||||| |||| | |    
T  24740054 agtttctaccaccgcacaacctccgatccacggaaagaacgacaaaaagagcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattata 24740153  T
Q  246 agcgatcggtccaccagac 264  Q
    ||||||||| |||||||||    
T  24740154 agcgatcggcccaccagac 24740172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 38637174 - 38637301
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||| |||| |||||||||||| | ||||| | | |||| |||||| |||| ||||||||||||||| | ||| |||||||||  |||||||||||    
T  38637174 aaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaa-accataaaaagcccaaaaccta-cttaagccaaagaattgactcccgat 38637271  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| |||||| || ||||||    
T  38637272 ctcgaatcaaaagtgatcggcccgccagac 38637301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 39420958 - 39421080
Alignment:
Q  140 atcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcg 238  Q
    |||||||||||||||||||||| | | ||| | | |||||||| || |||| ||||||||||||||||||  ||| | || ||  |||||||||||||||    
T  39420958 atcaatcagtttccaccacctctcgatctccgatccaccgaaaaaa-accataaaaagcccaaaaccaaaactgatctaaggaattgactcccgatctcg 39421056  T
Q  239 aatcaaaagcgatcggtccaccag 262  Q
    ||||||||| |||||| |||||||    
T  39421057 aatcaaaagtgatcggcccaccag 39421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 6599932 - 6600014
Alignment:
Q  183 gaacaccaaaaa-agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| ||| |||||||||| ||||||||  |||||| | ||||||||||||| |||||||||||||||| |||||||||    
T  6599932 gaacaccataaatagcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagac 6600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 21387159 - 21387273
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 249  Q
    ||||| ||| || ||||||| ||| ||| ||| ||||||||||  ||||||||   ||||||||  | |||| |||||| |||||||||||||||||| |    
T  21387159 ttccatcacatctcaacctccggtccactgaacgaacaccaaattagcccaaataaaaacttgaatcgaagaactgacttccgatctcgaatcaaaagtg 21387258  T
Q  250 atcggtccaccagac 264  Q
    |||||||||||||||    
T  21387259 atcggtccaccagac 21387273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 43374031 - 43374120
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaaga 221  Q
    ||||||||||||||||| |||||||||| | ||||||| | | ||| ||||||||||||||||| | | ||| ||||||||| |||||||    
T  43374031 ttctaaagatcaatcagcttccaccaccgcgcaacctccgatccactgaaagaacaccaaaaaacctcgaaatcaaacttgaaccaaaga 43374120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 43077126 - 43077000
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagccaaag---agctgac 227  Q
    ||||||||||| |||||  |||||||||  ||||| || | |  |||||||||||||| |||||||||||||| ||||||||| ||||||   || ||||    
T  43077126 ttctaaagatcgatcagcctccaccaccgtacaacatccgatcaaccgaaagaacacctaaaaaagcccaaaagcaaacttgaaccaaagaaaagttgac 43077027  T
Q  228 tcccgatctcgaatcaaaagcgatcgg 254  Q
    || ||||||||||| |||| |||||||    
T  43077026 tctcgatctcgaataaaaaacgatcgg 43077000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 8255129 - 8255039
Alignment:
Q  175 caccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||| ||| ||| ||||||||||| | |||||||| |||||| |||||| | ||||||| |||||||| |||||| |||||||||    
T  8255129 caccgaaagagcacaaaacaaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagac 8255039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 8268547 - 8268457
Alignment:
Q  175 caccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||| ||| ||| ||||||||||| | |||||||| |||||| |||||| | ||||||| |||||||| |||||| |||||||||    
T  8268547 caccgaaagagcacaaaacaaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagac 8268457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 38930094 - 38930021
Alignment:
Q  23 aaactccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    |||| |||||| ||||| |||||||||||||| | || |||||||| |||| | ||||||||||||||||||||    
T  38930094 aaaccccttcacgaaaccaccactgaaaaaacaaaattcataaccacacatcgtcactactcaacccaaaataa 38930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 49747612 - 49747539
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||| ||||||||||||||| | ||||| ||||||| ||||||| ||||||||| ||||||  ||||||||    
T  49747612 aaaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagac 49747539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 2061679 - 2061807
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    |||||||| |||  |||||||||||| | ||||| | | |||||||||||  |   |||||||||||| ||||  ||| ||||||| ||||||| | |||    
T  2061679 aaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaatc 2061778  T
Q  236 tcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| |||| | |||||||||    
T  2061779 tcgaatcaaaagtgatcagcccaccagac 2061807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 4305808 - 4305737
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||| |||| | |||||||| |||||| || |||||||||||||||||||||| |||||  |||||||||    
T  4305808 aaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagac 4305737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 35341335 - 35341390
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    ||||| |||||| | |||||||||||||||||||||| ||||||||| ||||||||    
T  35341335 aaaaggccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaag 35341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 12296460 - 12296370
Alignment:
Q  9 acatcaccacctaaaaac----tccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    ||||||||||||||||||    |||||   ||| |||||||||||||| |||||||||||||||  ||| ||||||||||| ||||||||||    
T  12296460 acatcaccacctaaaaacagactcctttccgaagcgaccactgaaaaa-cgatatccataaccacccatcgccactactcatcccaaaataa 12296370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 21983654 - 21983708
Alignment:
Q  42 ccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    |||| |||||||| | |||||||||||  ||||||||||||||||||||||||||    
T  21983654 ccacggaaaaaacaaaatccataaccacccattgccactactcaacccaaaataa 21983708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 260
Target Start/End: Complemental strand, 2825867 - 2825799
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacc 260  Q
    |||||||||||| | |  ||||||||||||| ||| |||||||||||||||||||  |||||| |||||    
T  2825867 aaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccacc 2825799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 31050659 - 31050731
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| | ||||  | ||||||| || ||| |||||||||||||||||| |||||| |||||||||    
T  31050659 aaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagac 31050731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 46487536 - 46487465
Alignment:
Q  25 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataaa 97  Q
    ||||||||| ||| |||||||||||||| |||||| |||||||| | || ||||||||||| || ||||||||    
T  46487536 actccttcatgaagcgaccactgaaaaa-cgatattcataaccacatatcgccactactcatcctaaaataaa 46487465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 48098418 - 48098362
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    ||||||||||||||||||||| | ||||  | |||||||||||||||||| ||||||    
T  48098418 aaaaagcccaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaag 48098362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 21988007 - 21988045
Alignment:
Q  258 accagacgggcacccctta-ccccggtccaccagagaat 295  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21988007 accagacgggcaccccttacccccggtccaccagagaat 21988045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 30167576 - 30167622
Alignment:
Q  207 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcg 253  Q
    |||||||| |||||| | ||||||||||||||||||||||| |||||    
T  30167576 aacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcg 30167622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 30964520 - 30964454
Alignment:
Q  197 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 263  Q
    ||||||| | |||||||| |||||| | ||||||||||| ||||||||||| |||||| ||| ||||    
T  30964520 cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcaga 30964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 38929827 - 38929789
Alignment:
Q  258 accagacgggcacccctta-ccccggtccaccagagaat 295  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38929827 accagacgggcaccccttacccccggtccaccagagaat 38929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 16833017 - 16833078
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    |||||||||||| |||||||||| ||||  |  ||||| |||||||||||||||||| ||||    
T  16833017 aaaaagcccaaatccaaacttgatccaacaaaatgacttccgatctcgaatcaaaagtgatc 16833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 36962628 - 36962684
Alignment:
Q  207 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| |||||| |||||||| ||||||||||||||||  ||||| |||||||||    
T  36962628 aacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagac 36962684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 39041302 - 39041343
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| |||||||||||||||| |||||| |||||||||    
T  39041302 ctgactcctgatctcgaatcaaaagtgatcggcccaccagac 39041343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 40813813 - 40813850
Alignment:
Q  227 ctcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagac 40813850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 109 - 260
Target Start/End: Complemental strand, 47945873 - 47945722
Alignment:
Q  109 gcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa 208  Q
    ||||| |||||  ||||||||||||| |||||||||| |  |||||||||||||||| ||| ||  |||||||||||||||| |||||||||||| ||||    
T  47945873 gcatcccctaaactgagccactattcaaaagatcaattaacttccaccacctcacaatctccggaccaccgaaagaacaccataaaagcccaaaatcaaa 47945774  T
Q  209 cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacc 260  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||| |||||    
T  47945773 cttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccacc 47945722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 264
Target Start/End: Complemental strand, 5556721 - 5556582
Alignment:
Q  126 ccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaagagct 224  Q
    ||||| ||||||||||||| |||  |||||||||||  |||||| ||| |||||||||||||||  ||||||||||||||||| ||||| ||||||| ||    
T  5556721 ccacttttctaaagatcaaccagcctccaccacctctaaacctccggtccaccgaaagaacacctgaaaagcccaaaaccaaaacttgaaccaaagaact 5556622  T
Q  225 gactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  5556621 gactcccgatctcgaatcaaaagcgatcgccccaccagac 5556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 1652823 - 1652950
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactccc 231  Q
    |||||||||||| |||  |||| ||||| |  |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||     
T  1652823 ttctaaagatcattcaacttccgccaccgcttaacctccggtccaccgaaagaacaccaaaaaagcccaaaaccaaacttgaaccaaagaactaactcct 1652922  T
Q  232 gatctcgaatcaaaagcgatcggtccac 259  Q
    |||||||||||||||| |||||| ||||    
T  1652923 gatctcgaatcaaaagtgatcggcccac 1652950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 264
Target Start/End: Complemental strand, 27399102 - 27398970
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactccc 231  Q
    ||||||||||| ||||   |||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||| ||||| | ||||||||     
T  27399102 tctaaagatcattcagcaaccaccacctctcaacctctggtccaccaaaagaacaccaaaaaaagcccaaaaccaaacttgaaccaaataactgactcct 27399003  T
Q  232 gatctcgaatcaaaagcgatcggtccaccagac 264  Q
    || |||||||| |||||||| |  |||||||||    
T  27399002 gacctcgaatctaaagcgattgtgccaccagac 27398970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 264
Target Start/End: Original strand, 33143891 - 33144018
Alignment:
Q  138 agatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccgatc 235  Q
    ||||||||||| |||||||||||| | ||||||| | ||||||||||| |||| ||||||||||||| | || ||||| ||||||| |||||||||||||    
T  33143891 agatcaatcagcttccaccacctcgcgacctctgatccaccgaaagaa-accataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatc 33143989  T
Q  236 tcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| ||||| ||||||||||    
T  33143990 tcgaatcaaaagtgatcgatccaccagac 33144018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 823375 - 823494
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||| |||| |||| ||||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||||||   ||| | ||||||| ||||    
T  823375 aaagatcattcagcttccgccacctctcaacctctggtctaccgaaagaacaccaaaataagcccaaaacaaaacttgaatgaaacaactgactctcgat 823474  T
Q  235 ctcgaatcaaaagcgatcgg 254  Q
    ||||||||||||| ||||||    
T  823475 ctcgaatcaaaagtgatcgg 823494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 30935326 - 30935456
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaa-caccaaaaaagcccaaaaccaaacttgagccaaagagctgactcc 230  Q
    |||||||||||| |||| |||||||||| |  || ||| ||| | | ||||||| |||||||||||| ||||||||||||||| ||||| | || |||||    
T  30935326 ttctaaagatcattcagcttccaccaccgcgtaatctccggtccgctgaaagaaacaccaaaaaagctcaaaaccaaacttgaaccaaataactaactcc 30935425  T
Q  231 cgatctcgaatcaaaagcgatcggtccacca 261  Q
    |||||| ||||||||||||||| | ||||||    
T  30935426 cgatcttgaatcaaaagcgatcagcccacca 30935456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 43012503 - 43012387
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| | ||||||| | |||||||||| ||| |||  ||||| ||||| | |||||||| |||||| |||||||||||||||||||||||||    
T  43012503 ttccacaacctcgcgacctctgattcaccgaaagagcacaaaacaaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaag 43012404  T
Q  248 cgatcggtccaccagac 264  Q
     |||||| |||||||||    
T  43012403 tgatcgggccaccagac 43012387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 19176586 - 19176514
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  19176586 aaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 19176514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 25594454 - 25594577
Alignment:
Q  118 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcca 217  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||||           ||| |||||||||||||||||||||||| |||| ||||| |||    
T  25594454 aagttgagccactattctaaagatcaatccgcttccaccacatcac-----------cactgaaagaacaccaaaaaagcccaaagccaatcttgaacca 25594542  T
Q  218 aagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    ||||  | ||| ||||||| |||||||||||||||    
T  25594543 aagaattaacttccgatctagaatcaaaagcgatc 25594577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 17551040 - 17550969
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  17551040 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 17550969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 264
Target Start/End: Original strand, 9584013 - 9584122
Alignment:
Q  157 acctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    ||||| ||||||| | | |||||||||| ||| |||  ||||||||||| | | |||||| |||||| ||||||||||||||||||||||||| |||||     
T  9584013 acctcgcaacctccgatccaccgaaagatcacaaaacaaaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcga 9584112  T
Q  255 tccaccagac 264  Q
    ||||||||||    
T  9584113 tccaccagac 9584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 23328303 - 23328416
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||| ||||| | ||||||||||||| |||| ||||||||||||||||||||||    
T  23328303 ttccacaacctctcgacctccgatccaccgaaagagcacaaaacaaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaag 23328402  T
Q  248 cgatcggtccacca 261  Q
     |||||||||||||    
T  23328403 tgatcggtccacca 23328416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 37123467 - 37123397
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    |||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| ||||||    
T  37123467 aaaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccacca 37123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 39021273 - 39021342
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  39021273 aaaagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 264
Target Start/End: Original strand, 40023541 - 40023641
Alignment:
Q  166 cctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 263  Q
    |||||| | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||   ||||||||||||||||||||||| |||||||||||||||    
T  40023541 cctctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccaga 40023640  T
Q  264 c 264  Q
    |    
T  40023641 c 40023641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 14194027 - 14193952
Alignment:
Q  191 aaaaagcccaaaaccaaa--cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||  ||||||||||||| | ||||||| ||||||||||||||| ||||||||| ||||||    
T  14194027 aaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagac 14193952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 45398880 - 45398808
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| | ||||| |  |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  45398880 aaaagcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagac 45398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 14879576 - 14879447
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccga 233  Q
    |||||||| | || |||||||||||| | |||||   | ||||||||||| |||| |||||| ||||||||||| ||||| |||| || | |||||||||    
T  14879576 aaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaa-accataaaaagtccaaaaccaaaacttgatccaacgaacagactcccga 14879478  T
Q  234 tctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||| |||||| |||||||||    
T  14879477 tctcgaatcaaaagtgatcggcccaccagac 14879447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 38488940 - 38488835
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcc 230  Q
    ||||||||||||| |||  ||||| |||   ||||||| ||| ||||||||||||||| || |||||||||||||||||||||  |||||  ||||||||    
T  38488940 ttctaaagatcaaccagcctccacaaccgtgcaacctccggtccaccgaaagaacacctaacaaagcccaaaaccaaacttgaaacaaagcactgactcc 38488841  T
Q  231 cgatct 236  Q
    ||||||    
T  38488840 cgatct 38488835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 2392504 - 2392573
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccag 262  Q
    ||||||||||| | ||||| || |||||| |||||| || ||||||||||||||| ||||||||||||||    
T  2392504 aaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccag 2392573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 25594328 - 25594417
Alignment:
Q  9 acatcaccacctaaaa---actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    ||||||| ||||||||   |||||||||  ||||||||||||||||||||||||||| |||||  ||| ||||||||||| ||||| ||||    
T  25594328 acatcactacctaaaacatactccttcacaaaacgaccactgaaaaaacgatatcca-aaccacccatcgccactactcatcccaagataa 25594417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 30127333 - 30127274
Alignment:
Q  206 aaacttgagccaa-agagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||  ||||||||    
T  30127333 aaacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagac 30127274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 14755260 - 14755334
Alignment:
Q  191 aaaaagcccaaaaccaaacttgag-ccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| |||| || ||  ||||||| |||||||||||||| |||||||||| |||||| |||||||||    
T  14755260 aaaaagcccaaatccaacctcgaaaccaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagac 14755334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 2394255 - 2394320
Alignment:
Q  197 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccag 262  Q
    ||||||| | ||||| || |||||| |||||| || ||||||||||||||| ||||||||||||||    
T  2394255 cccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccag 2394320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 20611866 - 20611813
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 246  Q
    ||||||||||| | ||||| || |||||| ||||||||||||||||||||||||    
T  20611866 aaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaa 20611813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 46358315 - 46358428
Alignment:
Q  124 agccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagc 223  Q
    ||||| |||||  ||||||||| || |||||||||||| |||||||   | ||| ||||||||| ||||| |||||||| |||||||| | | |||||      
T  46358315 agccattattcccaagatcaataagcttccaccacctctcaacctccaatccactgaaagaacatcaaaacagcccaaagccaaacttaaactaaagaag 46358414  T
Q  224 tgactcccgatctc 237  Q
    |||||||| |||||    
T  46358415 tgactccccatctc 46358428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 34475783 - 34475823
Alignment:
Q  224 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 34475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 20710740 - 20710777
Alignment:
Q  227 ctcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagac 20710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 31424289 - 31424248
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||||||| ||| | |||||||    
T  31424289 ctgactcccgatctcgaatcaaaagcgaccggcctaccagac 31424248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 264
Target Start/End: Complemental strand, 15906872 - 15906698
Alignment:
Q  91 aaataaatcactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaa-cacc 189  Q
    ||||||| ||| |||||| |||| |||||||||||| ||||||||| | ||||||||  ||||||||||||  |||||||||| ||| ||||||| |||     
T  15906872 aaataaaacacactgtcctcatcacctaagttgagctactattctataaatcaatcatcttccaccacctcttaacctctggtccactgaaagaaacact 15906773  T
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||| | |||||| |||||||||    
T  15906772 aaatcagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagac 15906698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 17720610 - 17720771
Alignment:
Q  99 cactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcc 198  Q
    ||||| |||| |||| | ||| |||||||||||||||||||||||||||  |||||||||||| |||||||  || ||||||||||||||||||| ||||    
T  17720610 cactccgtcctcatcacttaatttgagccactattctaaagatcaatcaacttccaccacctctcaacctcaagtccaccgaaagaacaccaaaacagcc 17720709  T
Q  199 caaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||| || |||| ||||||| ||||||||||||| |||||||||||||||| | ||||||    
T  17720710 caaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccacca 17720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 30236064 - 30236197
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgactcc 230  Q
    ||||||||||||||||| |||||||||  | ||| ||||||| |||||| | |||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  30236064 ttctaaagatcaatcagcttccaccactgcgcaatctctggtccaccgatacaacaccaaaaaaagcccaaaaccaaacttgaaccaaagaactgactcc 30236163  T
Q  231 cgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||||  |||||||||    
T  30236164 cgatctcgaatcaaaagcgatcgtcccaccagac 30236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 264
Target Start/End: Complemental strand, 35062600 - 35062469
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    ||||||||||| |||  |||||||||| | ||||||||| | ||||||| ||||||| |||||||||||||||||||| || | | ||| ||||||| ||    
T  35062600 tctaaagatcattcaccttccaccaccgcgcaacctctgatccaccgaaggaacacctaaaaagcccaaaaccaaactagaacaagagaactgactctcg 35062501  T
Q  233 atctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||| ||||||| |||||||||    
T  35062500 atctcgaatcaaaatcgatcggcccaccagac 35062469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 253
Target Start/End: Original strand, 17656943 - 17657060
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||| |||| |||||||||||  | ||||| | | ||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  17656943 aaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaa-accataaaaagtccaaaaccaaacttgagccaaagaactgactcccgat 17657041  T
Q  235 ctcgaatcaaaagcgatcg 253  Q
    ||||||||||||| |||||    
T  17657042 ctcgaatcaaaagtgatcg 17657060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 41791209 - 41791322
Alignment:
Q  140 atcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcga 239  Q
    ||||||| | |||||||||| | |||||||| || || ||||| ||||||||||||| ||||||| |||||||| |||||||  |||||| |||||||||    
T  41791209 atcaatccgcttccaccaccgcgcaacctctagtccatcgaaataacaccaaaaaagtccaaaactaaacttgaaccaaagaagtgactctcgatctcga 41791308  T
Q  240 atcaaaagcgatcg 253  Q
    ||||||||||||||    
T  41791309 atcaaaagcgatcg 41791322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 264
Target Start/End: Complemental strand, 10552410 - 10552280
Alignment:
Q  133 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 232  Q
    ||||||||||| |||| |||||||||  | ||||||| ||| | |||||  |||||| ||||||| |||||||||||| || ||| ||| ||||||||||    
T  10552410 tctaaagatcattcagcttccaccacaacgcaacctc-ggtcccccgaagtaacacctaaaaagcacaaaaccaaactagaaccagagaactgactcccg 10552312  T
Q  233 atctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||| ||||||||||||||||| |||||||||    
T  10552311 atctagaatcaaaagcgatcggcccaccagac 10552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 10248494 - 10248619
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||||||| |||||||||||| |  |||| | | |||| |||||| |||| | |||||  |||||||||||||||||||||| ||||||||||||    
T  10248494 aaagatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaa-accatataaagcaaaaaaccaaacttgagccaaagaactgactcccgat 10248592  T
Q  235 ctcgaatcaaaagcgatcggtccacca 261  Q
    || |||||||||| |||||||||||||    
T  10248593 cttgaatcaaaagtgatcggtccacca 10248619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 32945683 - 32945760
Alignment:
Q  175 caccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||||    
T  32945683 caccgaaagaacatcaaaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatc 32945760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 24995393 - 24995464
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  24995393 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 24995464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 264
Target Start/End: Original strand, 32066256 - 32066364
Alignment:
Q  157 acctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggt 255  Q
    ||||| |||||||||   |||||||||| ||| | | ||||||||||| | |||| ||| ||||||||||||||||||| |||||||||||| ||||||     
T  32066256 acctcgcaacctctgaaccaccgaaagagcacaacacaaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggc 32066355  T
Q  256 ccaccagac 264  Q
    |||||||||    
T  32066356 ccaccagac 32066364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 15821330 - 15821448
Alignment:
Q  148 gtttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaa 245  Q
    |||||||| ||||| | ||||||| | ||| |||||| ||| |||  ||||||||||| | ||| | || ||||||||||||||||||||||||||||||    
T  15821330 gtttccacaacctctcgacctctgatccactgaaagagcacaaaacaaaagcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaa 15821429  T
Q  246 agcgatcggtccaccagac 264  Q
    || |||| | |||||||||    
T  15821430 agtgatcagcccaccagac 15821448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 31207364 - 31207431
Alignment:
Q  197 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  31207364 cccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 31207431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 12198064 - 12198138
Alignment:
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| ||||||||||||||||||||||| ||||||||| || |  ||| ||||| ||||||||||||||||    
T  12198064 aaaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 12442492 - 12442566
Alignment:
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||| ||||||||||||||||||||||| ||||||||| || |  ||| ||||| ||||||||||||||||    
T  12442492 aaaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12442566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 36630921 - 36630849
Alignment:
Q  192 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| |||||| ||| |||||| ||||| ||||||||||||| ||||| |||||| |||||||||    
T  36630921 aaaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagac 36630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 9519582 - 9519511
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||  |||||| |||| ||||    
T  9519582 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagac 9519511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 34389003 - 34389074
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | |||||||| |||||| |||||||  |||||||||||||||| |||||| |||||||||    
T  34389003 aaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagac 34389074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 16457459 - 16457520
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    |||||| |||| | |||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  16457459 aaagcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg 16457520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 37986856 - 37986927
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||| | |||||||| |||||| ||||||||||||||||||||||||  ||| || |||||||||    
T  37986856 aaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagac 37986927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 41893399 - 41893469
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||| | | || |||||||||    
T  41893399 aaagcccaaaaacaa-cttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagac 41893469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 15906949 - 15906882
Alignment:
Q  28 ccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 96  Q
    |||||| ||||||||||||||||||  | |||||||||||| |  ||||||||||||| ||||||||||    
T  15906949 ccttcacgaaacgaccactgaaaaacag-tatccataaccacatgttgccactactcatcccaaaataa 15906882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 20138509 - 20138448
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    ||||||||||| | ||| | || |||||| ||||||||||||||| ||||||||| ||||||    
T  20138509 aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 264
Target Start/End: Complemental strand, 6727 - 6570
Alignment:
Q  107 ccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacca 206  Q
    ||||||| |||||||||||||||||||||||||| ||||||  ||||||| || |||||||||| |  |||||||||||||| ||||||||| |||||||    
T  6727 ccgcatcccctaagttgagccactattctaaagaccaatcatcttccacctccacacaacctctagaccaccgaaagaacacaaaaaaagccaaaaacca 6628  T
Q  207 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||| || ||| || |||| |||||||||| ||||| | ||||||||    
T  6627 aacttgagccaaagaactaactaccaatcttgaatcaaaagagatcgttgcaccagac 6570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 9224186 - 9224053
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaa-aaaagcccaaaaccaaacttgagccaaagagctgactcc 230  Q
    |||||||||||| |||| |||||||||| ||||||||| ||| |||||||||| |||||| |||||||||||||||||  ||| ||||||| ||||||||    
T  9224186 ttctaaagatcattcagcttccaccaccgcacaacctccggtgcaccgaaagagcaccaataaaagcccaaaaccaaaactgaaccaaagaactgactcc 9224087  T
Q  231 cgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||||||| | |||||||||    
T  9224086 cgatctcgaatcaaaagcgatcagcccaccagac 9224053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 253
Target Start/End: Original strand, 13098483 - 13098629
Alignment:
Q  107 ccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacca 206  Q
    ||||||| |||||| ||||||||||||||||||||||||||  ||||||| || |||||||||  |  |||||||||||||| ||||||||| |||||||    
T  13098483 ccgcatcccctaagctgagccactattctaaagatcaatcatcttccacctccacacaacctccagaccaccgaaagaacacaaaaaaagccaaaaacca 13098582  T
Q  207 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcg 253  Q
    ||||||||||||||| || |||||| |||| |||||| ||| |||||    
T  13098583 aacttgagccaaagaactaactcccaatcttgaatcagaagagatcg 13098629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 26534652 - 26534788
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagcca---aagagctgac 227  Q
    ||||||||||||||||| |||||||||| ||||||||  ||| ||||||||||||||| |||||||||||||||||||||||| |||   |||| |||||    
T  26534652 ttctaaagatcaatcagcttccaccaccgcacaaccttcggtccaccgaaagaacacctaaaaaagcccaaaaccaaacttgaaccaaagaagaactgac 26534751  T
Q  228 tcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||| ||||||||||||||| |||||| |||||||||    
T  26534752 tcccaatctcgaatcaaaagtgatcggcccaccagac 26534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 26215960 - 26216088
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    ||||||||||||| |||||||||| | ||| ||| ||| |||| |||||||||||||||||||||||||||||  ||| || |||| |||||||||||||    
T  26215960 aaagatcaatcagcttccaccaccgcgcaatctccggtccaccaaaagaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatc 26216059  T
Q  236 tcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||| |||||| |||||||||    
T  26216060 tcgaatcaaaagtgatcggcccaccagac 26216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 132 - 262
Target Start/End: Complemental strand, 21266257 - 21266127
Alignment:
Q  132 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactccc 231  Q
    |||| ||||||||| ||  ||||||||| ||||| ||||||| |||| |||||||||||| ||||||||||||||||||||| ||| | | || ||||||    
T  21266257 ttctgaagatcaattagcctccaccaccgcacaatctctggtccaccaaaagaacaccaacaaagcccaaaaccaaacttgaaccacataactaactccc 21266158  T
Q  232 gatctcgaatcaaaagcgatcggtccaccag 262  Q
    ||||||||||||||||||||||| |||||||    
T  21266157 gatctcgaatcaaaagcgatcggcccaccag 21266127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 32935280 - 32935408
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 235  Q
    ||||||||  ||| |||||||||||| |||||| ||   |||||||||||||| ||||||| |||||| |||||||||| | |||| |||||||||||||    
T  32935280 aaagatcatgcagcttccaccacctcccaacctttgaaccaccgaaagaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatc 32935379  T
Q  236 tcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||| |||||||||    
T  32935380 tcgaatcaaaagcgatcggcccaccagac 32935408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 33968531 - 33968670
Alignment:
Q  111 atcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaact 210  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||| ||||||  ||| |  | ||||||||  |||||| || ||| | |||||    
T  33968531 atcgccaaagttgagccactattctaaagatcaatcagcttccaccatctctcaaccttcggtccgtcaaaagaaca--aaaaaatccaaaatcaaaact 33968628  T
Q  211 tgagccaaagagctgactcccgatctcgaatcaaaagcgatc 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||    
T  33968629 tgaaccaaagaactgactcccgatctcgaatcaaaagcgatc 33968670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 13423606 - 13423482
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    ||||||||||||| |||||||||||| |  |||| ||| || |||||||| |||| | |||||||| |||||||||||||||||||| | ||||| ||||    
T  13423606 aaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaa-accatataaagcccataaccaaacttgagccaaagaaccgactctcgat 13423508  T
Q  235 ctcgaatcaaaagcgatcggtccacc 260  Q
    ||||||||||||| ||||||||||||    
T  13423507 ctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 20701744 - 20701862
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||||| |||| |||||| ||||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||| ||||||||| || |||||||||    
T  20701744 aaagatcattcagcttccactacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttaagccaaagaactaactcccgat 20701842  T
Q  235 ctcgaatcaaaagcgatcgg 254  Q
    ||||||||||||| ||||||    
T  20701843 ctcgaatcaaaagtgatcgg 20701862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 21265111 - 21265003
Alignment:
Q  151 tccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcga 250  Q
    ||||||||| ||||| ||| ||| || | |||||||||||| ||||||||||||||||||||| ||| | | || ||||||||||||||||||||||| |    
T  21265111 tccaccaccgcacaatctccggtccatcaaaagaacaccaacaaagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagcta 21265012  T
Q  251 tcggtccac 259  Q
    |||| ||||    
T  21265011 tcggcccac 21265003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 3117576 - 3117508
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||| | |||||||| |||||| |||||||||||||| |||||||||| |||||| ||||||    
T  3117576 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccacca 3117508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 15944178 - 15944041
Alignment:
Q  116 ctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagccc-aaaaccaaacttgag 214  Q
    |||||||||||||||| ||  |||||||| ||  |||| |||||||| ||||||||||  ||| |||||| ||| ||||||||| |||| |||  ||||     
T  15944178 ctaagttgagccactactc--aagatcaaacaacttcctccacctcaaaacctctggtcaaccaaaagaaaacctaaaaagcccaaaaaacaagattgaa 15944081  T
Q  215 ccaaagagctgactcccgatctcgaatcaaaagcgatcgg 254  Q
    |||| || |||||||| || ||| ||||||||| ||||||    
T  15944080 ccaaggaactgactccagaactctaatcaaaagtgatcgg 15944041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 15120538 - 15120623
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaaga 221  Q
    ||||||||| ||| |||||||||||| | ||||| | | |||| |||||| |||| |||||||||||||| ||||||||||||||||    
T  15120538 aaagatcaaccagcttccaccacctctcgacctccgatccaccaaaagaa-accataaaaagcccaaaactaaacttgagccaaaga 15120623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 261
Target Start/End: Complemental strand, 20499965 - 20499934
Alignment:
Q  230 ccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||||||||||||||||||||||||    
T  20499965 ccgatctcgaatcaaaagcgatcggtccacca 20499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 7546464 - 7546498
Alignment:
Q  230 ccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    |||||||||||||||||| ||||||||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagac 7546498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 34105466 - 34105428
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  34105466 ctgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 12794201 - 12794144
Alignment:
Q  190 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    ||||||||| ||||| |||||||  || |||| |||||||| ||||||||||||||||    
T  12794201 aaaaaagccaaaaactaaacttggacccaagaactgactcctgatctcgaatcaaaag 12794144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 16180837 - 16180873
Alignment:
Q  130 tattctaaagatcaatcagtttccaccacctcacaac 166  Q
    |||| |||||||||||||| |||||||||||||||||    
T  16180837 tattttaaagatcaatcagcttccaccacctcacaac 16180873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 943 - 1086
Alignment:
Q  122 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaag 220  Q
    ||||||||||||||||||||||||||  ||||||||| ||  || ||| | | || ||| ||||||| |||||| | |||||||||| ||| | ||||||    
T  943 tgagccactattctaaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacactaaaaaacctcaaaaccaaaacttaaaccaaag 1042  T
Q  221 agctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    | |||||||||||||||||||||||||||||||| |||||||||    
T  1043 aactgactcccgatctcgaatcaaaagcgatcggcccaccagac 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 19523 - 19395
Alignment:
Q  136 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 234  Q
    |||||| | |||| |||||||| ||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  19523 aaagattattcagcttccaccaactctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgagccaaagaactgacttccgat 19425  T
Q  235 ctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||| |||||| |||||||||    
T  19424 ctcgaatcaaaagtgatcggcccaccagac 19395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 42134 - 42207
Alignment:
Q  191 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  42134 aaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 42207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 58228 - 58142
Alignment:
Q  175 caccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 261  Q
    ||||||||||| |||| |||||||| |||||||||||||| ||||| |  ||||| ||||||| |||||||||| |||||| ||||||    
T  58228 caccgaaagaa-accataaaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccacca 58142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 36835 - 36731
Alignment:
Q  150 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaac--ttgagccaaagagctgactcccgatctcgaatcaaaag 247  Q
    ||||||||| || | ||||| | | |||||||||||  |  |||||| |||||||||||   ||||| |||||| |||||||||||||||||||||||||    
T  36835 ttccaccacatctcgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaaagaactgactcccgatctcgaatcaaaag 36736  T
Q  248 cgatc 252  Q
     ||||    
T  36735 tgatc 36731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 35770 - 35840
Alignment:
Q  193 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||| | ||||| || ||||||  |||||||||||||||||||||||| |||||| |||| ||||    
T  35770 aaagcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagac 35840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 3883 - 3842
Alignment:
Q  223 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 264  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  3883 ctgactcccgatctcgaatcaaaattgatcggcccaccagac 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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