View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8608_low_2 (Length: 390)
Name: NF8608_low_2
Description: NF8608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8608_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 54 - 381
Target Start/End: Original strand, 11509466 - 11509793
Alignment:
| Q |
54 |
gatgaagtctgcgcttacgacttgtaacattaactggaagtgttaccaaaaccaccacagaacctctttctctgttagcaataccatcaattaccgaaca |
153 |
Q |
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| T |
11509466 |
gatgaagtctgcgcttacgacttgtaacattaactggaagtgttaccaaaaccaccacagaacctctttctctgttaccaataccatcaattaccgaaca |
11509565 |
T |
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| Q |
154 |
cgctgttccatttccatggcaaatccaatcaaaacctaccatttatccaacctcactcaaaccgaacttctctccctcaaatctcgtccacgcatcgatt |
253 |
Q |
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| T |
11509566 |
cgctgttccatttccatggcaaatccaatcaaaacctaccatttatccaacctcactcaaaccgaacttctctccctcaaatctcgtccacgcatcgatt |
11509665 |
T |
|
| Q |
254 |
tctcttctgttttcgacattgtaacctttctctccccttttcatactcttcctctaatgggtttttatttttcactctcaaaatcatacctttttgcttt |
353 |
Q |
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| T |
11509666 |
tctcttctgttttcgacattgtaacctttctctccccttttcatactcttcctctaatgggtttttatttttcactctcaaaatcatacctttttgcttt |
11509765 |
T |
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| Q |
354 |
ttcaggtcaaccccattgttgatgatgt |
381 |
Q |
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| T |
11509766 |
ttcaggtcaaccccattgttgatgatgt |
11509793 |
T |
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