View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8614_low_6 (Length: 245)
Name: NF8614_low_6
Description: NF8614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8614_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 6387090 - 6386869
Alignment:
| Q |
5 |
tcgagtttcgtgttaagttaaccataagttannnnnnnnagctaatcgtgtcttttctaaaacaaaaactcgttcagaaaagaggaaatttatttctccc |
104 |
Q |
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| T |
6387090 |
tcgagtttcatgttaagttaaccataagttattttttttagctaattgtgtcttttctaaaacaaaaactcgttcagaaaagaggaaatttatttctccc |
6386991 |
T |
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| Q |
105 |
ctcttaataagagaggattcattttggtcacagagggatacagtcaaagcagcttctgagtttgcttcaagaaatcatctgccacgtcgcgtacacaatc |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6386990 |
ctcttaataagagaggattcattttggtcacagagggatacagtcaaagcagcttctgagtttgcttcaagaaatcatctgccacgtcgcgtacacaatc |
6386891 |
T |
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| Q |
205 |
aaatgttggcacacatttgttt |
226 |
Q |
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|||||||||||||||||||||| |
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| T |
6386890 |
aaatgttggcacacatttgttt |
6386869 |
T |
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