View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8616_low_5 (Length: 443)
Name: NF8616_low_5
Description: NF8616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8616_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 366
Target Start/End: Complemental strand, 31631057 - 31630709
Alignment:
| Q |
18 |
actttgattggtccatttcctttagacccagttcttaagtttgttcaatgtgattatggtgttggggtgccgattcttgaaaagcaagctaataggtttg |
117 |
Q |
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| T |
31631057 |
actttgattggtccatttcctttagacccagttcttaagtttgttcaatgtgattatggtgttggggtgccaattcttgaagagcaagctaataggtttg |
31630958 |
T |
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| Q |
118 |
ctggtaatcgttctttgcttagggagattttgatggaagggtttaatgtgaattataacaacccttttgagaatgattgtcttgagtgtattagttctgg |
217 |
Q |
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| T |
31630957 |
ctggtaatcgttctttgcttagggaggttttgatggaagggtttaatgtgaattataacaacccttttgagaatgattgtcttgagtgtattagttctgg |
31630858 |
T |
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| Q |
218 |
tggccaacaatgtgggtttgattctgatgataatgaacctatttgtatttgtggtaatgggttgtgtccttcaggtattttagcttttcttttggtagat |
317 |
Q |
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|||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
31630857 |
tggccaacaatgtgggtttgattctgatgaaaacgaacatatttgtatttgtggtaatgggttgtgtccttcaggtattttagcttttcttttggttaac |
31630758 |
T |
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| Q |
318 |
tgttgtgtttggtatttgatgatgagttttatttcatgtagtactaatg |
366 |
Q |
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| T |
31630757 |
tattgtgtttggtgtttgttgatgattcttatttcatgtagaactaatg |
31630709 |
T |
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