View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8617_high_9 (Length: 249)
Name: NF8617_high_9
Description: NF8617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8617_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10795881 - 10796112
Alignment:
| Q |
1 |
catcagagtacaagttaaagcaaagattgtcagaacaaaagctaaagtacgacattaagcagattataggaatgaaaaagaatgaatgatgaagattggc |
100 |
Q |
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| T |
10795881 |
catcagagtacaagttaaagcaaagattgtcagaacaaaagctaaagtacgacatttagcagattataggaatgaaaaagaatgaatgatgaagattggc |
10795980 |
T |
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| Q |
101 |
tcaaactgatttattaatcgatagagctgacataaaaagtttcacattatggatgtcagcatcgaaggaaccaagtttgttagcggtcagtttctaatgc |
200 |
Q |
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| T |
10795981 |
taaaaatgattcattaatagatagagctgacataaaaagttccacattttgcatgtcagcatctaaggaaccaagtttgttagcggtcagtttctaatgc |
10796080 |
T |
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| Q |
201 |
gcataaaatgcttattataacaactttgcaca |
232 |
Q |
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| T |
10796081 |
gcataaaatgcttattataacaactttgcaca |
10796112 |
T |
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