View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8617_low_11 (Length: 262)

Name: NF8617_low_11
Description: NF8617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8617_low_11
NF8617_low_11
[»] chr3 (53 HSPs)
chr3 (1-262)||(10795230-10795491)
chr3 (194-262)||(13628790-13628858)
chr3 (194-257)||(40272812-40272875)
chr3 (194-257)||(54484785-54484848)
chr3 (195-257)||(22609859-22609921)
chr3 (193-262)||(45786213-45786282)
chr3 (194-262)||(5173719-5173787)
chr3 (194-249)||(10484616-10484671)
chr3 (194-259)||(516504-516569)
chr3 (194-262)||(12525496-12525564)
chr3 (194-262)||(13730602-13730670)
chr3 (194-258)||(25517170-25517234)
chr3 (194-262)||(29366720-29366788)
chr3 (193-257)||(39203608-39203672)
chr3 (194-257)||(16735534-16735597)
chr3 (194-257)||(24851301-24851364)
chr3 (194-257)||(52926219-52926282)
chr3 (196-262)||(353351-353417)
chr3 (194-262)||(46421034-46421103)
chr3 (194-258)||(25944563-25944627)
chr3 (194-254)||(30452892-30452952)
chr3 (194-262)||(49013473-49013541)
chr3 (198-258)||(54374349-54374409)
chr3 (194-257)||(1217182-1217245)
chr3 (194-257)||(12914035-12914098)
chr3 (194-257)||(15797314-15797377)
chr3 (194-257)||(26869800-26869863)
chr3 (194-257)||(31592941-31593004)
chr3 (194-257)||(34771364-34771427)
chr3 (195-257)||(22122918-22122980)
chr3 (196-254)||(26573224-26573282)
chr3 (206-258)||(829454-829506)
chr3 (194-254)||(14266372-14266431)
chr3 (194-262)||(14987048-14987116)
chr3 (194-258)||(34420643-34420707)
chr3 (206-254)||(45948850-45948898)
chr3 (194-242)||(47624208-47624256)
chr3 (194-258)||(53996565-53996629)
chr3 (194-237)||(4495676-4495719)
chr3 (215-262)||(8247708-8247755)
chr3 (194-257)||(46169967-46170030)
chr3 (194-237)||(54032571-54032614)
chr3 (210-256)||(33926178-33926224)
chr3 (194-235)||(40390357-40390398)
chr3 (206-258)||(44403567-44403619)
chr3 (206-257)||(6411834-6411885)
chr3 (195-250)||(45288056-45288111)
chr3 (194-244)||(23871473-23871523)
chr3 (208-258)||(40968611-40968661)
chr3 (208-257)||(43114882-43114931)
chr3 (206-248)||(51644074-51644116)
chr3 (193-237)||(4835856-4835900)
chr3 (194-258)||(10696213-10696277)
[»] chr6 (32 HSPs)
chr6 (194-257)||(13267797-13267860)
chr6 (194-262)||(29355855-29355923)
chr6 (194-256)||(6808468-6808530)
chr6 (194-256)||(9161197-9161259)
chr6 (194-262)||(12221914-12221983)
chr6 (194-259)||(12885983-12886048)
chr6 (194-262)||(12892076-12892144)
chr6 (194-257)||(1347034-1347097)
chr6 (194-257)||(1354757-1354820)
chr6 (194-257)||(24097649-24097712)
chr6 (193-257)||(383759-383823)
chr6 (194-262)||(3116129-3116197)
chr6 (193-257)||(22967248-22967312)
chr6 (193-257)||(23821081-23821145)
chr6 (193-254)||(10734904-10734965)
chr6 (194-255)||(23930127-23930188)
chr6 (198-247)||(30786378-30786427)
chr6 (194-262)||(2166410-2166478)
chr6 (194-262)||(2178043-2178111)
chr6 (194-250)||(26097237-26097293)
chr6 (194-257)||(18277193-18277256)
chr6 (208-258)||(19340899-19340949)
chr6 (193-258)||(7947370-7947435)
chr6 (193-254)||(11395836-11395896)
chr6 (194-247)||(25557805-25557858)
chr6 (198-262)||(14975094-14975158)
chr6 (201-257)||(32579497-32579553)
chr6 (222-257)||(15865885-15865920)
chr6 (216-262)||(14553580-14553626)
chr6 (219-257)||(15866064-15866102)
chr6 (193-259)||(17432418-17432484)
chr6 (201-257)||(3815084-3815140)
[»] chr4 (61 HSPs)
chr4 (193-262)||(44363129-44363198)
chr4 (194-258)||(20639658-20639722)
chr4 (194-257)||(5648330-5648393)
chr4 (191-254)||(30690173-30690236)
chr4 (193-256)||(38755907-38755970)
chr4 (193-257)||(11394924-11394988)
chr4 (193-257)||(11404651-11404715)
chr4 (194-262)||(23501856-23501924)
chr4 (194-262)||(30352580-30352648)
chr4 (194-262)||(33836487-33836555)
chr4 (194-257)||(14983906-14983969)
chr4 (193-255)||(40553936-40553998)
chr4 (195-257)||(40915900-40915962)
chr4 (193-262)||(20225143-20225212)
chr4 (194-255)||(32484307-32484368)
chr4 (194-258)||(20908636-20908700)
chr4 (194-257)||(20225054-20225117)
chr4 (193-256)||(25388249-25388312)
chr4 (194-257)||(25629121-25629184)
chr4 (194-257)||(38786681-38786744)
chr4 (194-257)||(47444029-47444092)
chr4 (215-262)||(47482871-47482918)
chr4 (195-257)||(6430627-6430689)
chr4 (196-257)||(29207900-29207961)
chr4 (194-262)||(16408601-16408669)
chr4 (194-262)||(16911631-16911699)
chr4 (194-258)||(36816384-36816448)
chr4 (194-257)||(30639451-30639514)
chr4 (194-257)||(35567242-35567305)
chr4 (194-244)||(35532077-35532127)
chr4 (193-255)||(44718641-44718703)
chr4 (197-262)||(21647033-21647098)
chr4 (212-257)||(49796869-49796914)
chr4 (194-258)||(54175135-54175200)
chr4 (193-257)||(32478791-32478854)
chr4 (206-262)||(54730319-54730375)
chr4 (195-257)||(7909281-7909344)
chr4 (194-257)||(9832313-9832376)
chr4 (194-257)||(11054148-11054211)
chr4 (215-258)||(21489159-21489202)
chr4 (194-257)||(25463194-25463256)
chr4 (194-257)||(47528530-47528593)
chr4 (194-257)||(48598825-48598888)
chr4 (206-257)||(51865050-51865101)
chr4 (194-257)||(5306660-5306727)
chr4 (194-256)||(20405162-20405224)
chr4 (194-256)||(50555656-50555718)
chr4 (194-256)||(55830721-55830783)
chr4 (197-258)||(36589815-36589876)
chr4 (208-257)||(37494923-37494972)
chr4 (195-257)||(8473621-8473685)
chr4 (194-262)||(13256399-13256467)
chr4 (206-257)||(9987846-9987897)
chr4 (194-256)||(8820581-8820643)
chr4 (206-258)||(48033396-48033449)
chr4 (217-257)||(7385499-7385539)
chr4 (210-262)||(16494286-16494338)
chr4 (197-257)||(17043398-17043457)
chr4 (194-254)||(19027986-19028046)
chr4 (210-258)||(30581481-30581529)
chr4 (203-235)||(37038132-37038164)
[»] chr2 (47 HSPs)
chr2 (194-262)||(10543767-10543835)
chr2 (194-257)||(14444800-14444863)
chr2 (193-262)||(14530387-14530456)
chr2 (194-257)||(9671251-9671314)
chr2 (194-257)||(10546235-10546298)
chr2 (193-259)||(14544136-14544202)
chr2 (194-257)||(8455316-8455379)
chr2 (194-257)||(40762234-40762297)
chr2 (196-255)||(41409936-41409995)
chr2 (194-259)||(23488553-23488618)
chr2 (193-249)||(8575975-8576031)
chr2 (195-255)||(40579750-40579810)
chr2 (194-257)||(21779261-21779324)
chr2 (194-257)||(36871564-36871626)
chr2 (194-256)||(25079717-25079779)
chr2 (194-256)||(39914306-39914367)
chr2 (215-259)||(19185764-19185808)
chr2 (194-262)||(24200623-24200691)
chr2 (206-262)||(31158451-31158507)
chr2 (194-254)||(34080176-34080236)
chr2 (194-254)||(34766330-34766390)
chr2 (194-257)||(25249738-25249801)
chr2 (194-257)||(44643595-44643658)
chr2 (194-256)||(5841103-5841165)
chr2 (194-242)||(22371199-22371247)
chr2 (193-257)||(23397836-23397900)
chr2 (194-257)||(11514508-11514570)
chr2 (194-257)||(17896332-17896395)
chr2 (207-254)||(24890486-24890533)
chr2 (198-242)||(124918-124962)
chr2 (194-257)||(17668074-17668137)
chr2 (194-257)||(19977714-19977777)
chr2 (206-257)||(24860000-24860051)
chr2 (194-257)||(25632581-25632644)
chr2 (206-257)||(26684632-26684683)
chr2 (194-248)||(3633708-3633762)
chr2 (195-257)||(13245096-13245158)
chr2 (215-257)||(17380258-17380300)
chr2 (215-257)||(21377094-21377136)
chr2 (215-257)||(32781309-32781351)
chr2 (193-251)||(40416870-40416928)
chr2 (197-254)||(4516354-4516411)
chr2 (198-259)||(7214606-7214667)
chr2 (210-255)||(24059012-24059057)
chr2 (197-258)||(45235820-45235881)
chr2 (205-249)||(19615073-19615117)
chr2 (215-255)||(33795359-33795399)
[»] chr8 (42 HSPs)
chr8 (194-257)||(35261751-35261814)
chr8 (193-257)||(13160773-13160837)
chr8 (194-257)||(44530221-44530284)
chr8 (195-257)||(45071336-45071398)
chr8 (194-262)||(39460994-39461062)
chr8 (194-257)||(12625962-12626025)
chr8 (194-257)||(36720868-36720931)
chr8 (194-256)||(28817626-28817688)
chr8 (191-257)||(29877166-29877232)
chr8 (194-254)||(10857904-10857964)
chr8 (194-262)||(20869992-20870060)
chr8 (194-257)||(2626594-2626657)
chr8 (194-257)||(8897764-8897827)
chr8 (194-257)||(26102589-26102652)
chr8 (194-257)||(28407475-28407538)
chr8 (194-257)||(30454097-30454160)
chr8 (200-262)||(20284075-20284137)
chr8 (200-262)||(21070703-21070765)
chr8 (194-262)||(6760891-6760959)
chr8 (194-262)||(7136527-7136595)
chr8 (189-257)||(17823648-17823716)
chr8 (215-259)||(24245519-24245563)
chr8 (194-257)||(12670250-12670313)
chr8 (195-254)||(27507985-27508044)
chr8 (194-257)||(35107311-35107374)
chr8 (194-259)||(16013526-16013591)
chr8 (193-262)||(16225088-16225157)
chr8 (194-243)||(27468092-27468141)
chr8 (194-262)||(25250591-25250659)
chr8 (194-257)||(5135290-5135352)
chr8 (194-257)||(29521685-29521748)
chr8 (207-262)||(44781517-44781572)
chr8 (215-257)||(24365080-24365122)
chr8 (197-258)||(44742521-44742582)
chr8 (198-242)||(18164764-18164808)
chr8 (194-262)||(26954202-26954270)
chr8 (195-255)||(36486567-36486627)
chr8 (198-261)||(18595906-18595969)
chr8 (194-257)||(19729412-19729475)
chr8 (194-257)||(31457244-31457307)
chr8 (206-254)||(8483950-8483998)
chr8 (193-237)||(30962770-30962814)
[»] chr7 (43 HSPs)
chr7 (194-257)||(7879710-7879773)
chr7 (194-259)||(45018923-45018988)
chr7 (194-257)||(40463948-40464011)
chr7 (195-257)||(11617589-11617651)
chr7 (193-257)||(2541018-2541082)
chr7 (194-262)||(39123962-39124030)
chr7 (194-262)||(42805593-42805661)
chr7 (193-257)||(48735121-48735185)
chr7 (195-254)||(18747562-18747621)
chr7 (194-257)||(21172009-21172072)
chr7 (194-257)||(27629706-27629769)
chr7 (194-257)||(27889316-27889379)
chr7 (194-257)||(32758331-32758394)
chr7 (194-257)||(35787269-35787332)
chr7 (194-257)||(42391100-42391163)
chr7 (209-259)||(33500585-33500635)
chr7 (193-262)||(47716528-47716597)
chr7 (193-257)||(10693072-10693136)
chr7 (196-256)||(18512455-18512515)
chr7 (193-257)||(33871909-33871973)
chr7 (196-256)||(35334818-35334878)
chr7 (195-262)||(3469176-3469243)
chr7 (193-252)||(11888414-11888473)
chr7 (194-257)||(31591109-31591172)
chr7 (194-257)||(34626208-34626271)
chr7 (215-257)||(13805173-13805215)
chr7 (195-257)||(42476943-42477005)
chr7 (194-262)||(43557541-43557610)
chr7 (195-258)||(29907491-29907552)
chr7 (194-257)||(19426890-19426952)
chr7 (194-257)||(38262196-38262259)
chr7 (194-257)||(42798741-42798804)
chr7 (193-262)||(22698966-22699036)
chr7 (191-257)||(23419671-23419737)
chr7 (194-236)||(36602540-36602582)
chr7 (206-258)||(21566507-21566559)
chr7 (192-256)||(23231630-23231694)
chr7 (197-245)||(42495865-42495913)
chr7 (215-262)||(35203508-35203555)
chr7 (223-257)||(1408529-1408563)
chr7 (215-257)||(19266522-19266564)
chr7 (215-257)||(38604598-38604640)
chr7 (206-243)||(25434106-25434143)
[»] chr1 (58 HSPs)
chr1 (192-257)||(4349733-4349798)
chr1 (194-262)||(35005215-35005283)
chr1 (194-262)||(50606493-50606561)
chr1 (194-262)||(10668317-10668385)
chr1 (194-257)||(46247953-46248016)
chr1 (199-257)||(4587568-4587626)
chr1 (194-256)||(27474376-27474438)
chr1 (194-262)||(18944735-18944804)
chr1 (194-259)||(42304207-42304272)
chr1 (194-262)||(18741957-18742025)
chr1 (194-258)||(19701665-19701729)
chr1 (194-262)||(27201739-27201807)
chr1 (197-257)||(45402191-45402251)
chr1 (194-257)||(31382214-31382277)
chr1 (194-257)||(34725098-34725161)
chr1 (197-256)||(46991900-46991959)
chr1 (215-257)||(11596607-11596649)
chr1 (196-262)||(19932755-19932821)
chr1 (194-262)||(9939553-9939622)
chr1 (197-257)||(10378738-10378798)
chr1 (194-262)||(20004090-20004158)
chr1 (194-262)||(30395726-30395794)
chr1 (194-257)||(14617133-14617196)
chr1 (194-257)||(19414532-19414595)
chr1 (194-257)||(32632557-32632620)
chr1 (194-257)||(35253187-35253250)
chr1 (206-256)||(6925196-6925246)
chr1 (196-258)||(15511150-15511212)
chr1 (194-254)||(1517311-1517371)
chr1 (206-257)||(30555210-30555261)
chr1 (207-254)||(33594144-33594191)
chr1 (194-257)||(38478282-38478345)
chr1 (194-257)||(47214604-47214667)
chr1 (215-257)||(15505659-15505701)
chr1 (196-262)||(22324984-22325049)
chr1 (215-257)||(30682907-30682949)
chr1 (197-255)||(52910321-52910379)
chr1 (208-257)||(23768334-23768383)
chr1 (206-262)||(35117777-35117834)
chr1 (206-258)||(27136663-27136715)
chr1 (194-254)||(43768237-43768297)
chr1 (206-258)||(45264411-45264463)
chr1 (194-257)||(6983811-6983874)
chr1 (194-257)||(8197138-8197201)
chr1 (194-257)||(12126837-12126900)
chr1 (194-249)||(16120819-16120874)
chr1 (194-257)||(41319806-41319869)
chr1 (198-257)||(45812541-45812600)
chr1 (203-257)||(4430008-4430062)
chr1 (197-247)||(28894561-28894611)
chr1 (194-259)||(5549613-5549677)
chr1 (201-258)||(31442396-31442453)
chr1 (206-258)||(2435798-2435850)
chr1 (210-258)||(6358216-6358264)
chr1 (229-257)||(22930104-22930132)
chr1 (217-257)||(34148983-34149023)
chr1 (193-253)||(37299573-37299633)
chr1 (210-258)||(41440618-41440666)
[»] chr5 (45 HSPs)
chr5 (194-262)||(38879650-38879718)
chr5 (194-257)||(16957386-16957449)
chr5 (194-262)||(25622527-25622595)
chr5 (194-262)||(43334272-43334339)
chr5 (194-257)||(8169984-8170047)
chr5 (194-257)||(24448962-24449025)
chr5 (194-257)||(41014390-41014453)
chr5 (193-258)||(12575659-12575724)
chr5 (195-262)||(20135673-20135740)
chr5 (194-257)||(32703494-32703557)
chr5 (188-257)||(1565504-1565572)
chr5 (193-262)||(13801766-13801835)
chr5 (194-262)||(4619104-4619172)
chr5 (193-257)||(7097759-7097823)
chr5 (193-257)||(34154813-34154877)
chr5 (215-258)||(10306495-10306538)
chr5 (195-262)||(12006329-12006396)
chr5 (194-253)||(16028624-16028683)
chr5 (206-257)||(43574678-43574729)
chr5 (197-258)||(21784335-21784396)
chr5 (206-258)||(208939-208991)
chr5 (193-257)||(16880646-16880710)
chr5 (194-258)||(28516433-28516497)
chr5 (193-253)||(30877563-30877623)
chr5 (198-254)||(39801591-39801647)
chr5 (206-257)||(1850711-1850762)
chr5 (215-262)||(27328821-27328868)
chr5 (194-245)||(32354211-32354262)
chr5 (194-257)||(35710383-35710446)
chr5 (207-257)||(19142956-19143006)
chr5 (197-254)||(7368471-7368528)
chr5 (216-257)||(21542489-21542530)
chr5 (194-254)||(3771414-3771474)
chr5 (193-257)||(30006397-30006461)
chr5 (194-257)||(1405259-1405322)
chr5 (195-237)||(19438758-19438800)
chr5 (215-257)||(22600526-22600568)
chr5 (194-256)||(29334469-29334531)
chr5 (208-257)||(2838850-2838899)
chr5 (205-258)||(4654426-4654479)
chr5 (193-254)||(5873321-5873382)
chr5 (195-236)||(29184062-29184103)
chr5 (194-250)||(10943845-10943900)
chr5 (206-258)||(12477132-12477184)
chr5 (194-258)||(19093884-19093948)
[»] scaffold0057 (4 HSPs)
scaffold0057 (194-257)||(46903-46966)
scaffold0057 (194-257)||(24772-24835)
scaffold0057 (197-258)||(46710-46771)
scaffold0057 (194-257)||(43729-43793)
[»] scaffold0223 (1 HSPs)
scaffold0223 (191-257)||(11201-11267)
[»] scaffold0049 (1 HSPs)
scaffold0049 (193-262)||(59046-59115)
[»] scaffold1176 (1 HSPs)
scaffold1176 (193-257)||(1586-1650)
[»] scaffold0311 (1 HSPs)
scaffold0311 (194-257)||(10882-10945)
[»] scaffold0168 (1 HSPs)
scaffold0168 (194-257)||(30649-30712)
[»] scaffold0018 (1 HSPs)
scaffold0018 (194-257)||(72867-72930)
[»] scaffold0015 (1 HSPs)
scaffold0015 (194-257)||(48634-48697)
[»] scaffold0258 (1 HSPs)
scaffold0258 (194-256)||(13024-13086)
[»] scaffold0180 (1 HSPs)
scaffold0180 (194-257)||(24133-24196)
[»] scaffold0187 (2 HSPs)
scaffold0187 (196-257)||(10052-10113)
scaffold0187 (196-257)||(20380-20441)
[»] scaffold0013 (1 HSPs)
scaffold0013 (71-135)||(57738-57802)
[»] scaffold0954 (1 HSPs)
scaffold0954 (192-256)||(3617-3681)
[»] scaffold0050 (1 HSPs)
scaffold0050 (193-256)||(58629-58691)
[»] scaffold0194 (1 HSPs)
scaffold0194 (194-236)||(24741-24783)


Alignment Details
Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 10795230 - 10795491
Alignment:
Q  1 ctgcataagagatggagatgaccttcacttataaggatataattatttgacttggtttaaatgatccaacacataccactatagcacctattctttgtag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795230 ctgcataagagatggagatgaccttcacttataaggatataattatttgacttggtttaaatgatccaacacataccactatagcacctattctttgtag 10795329  T
Q  101 aagtgtgtatgatgttcctgccaaagccacctgttgagacaatgaaaattcatcgacaactgatcatatatgtttggatcggtttatttgagtaaagggc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795330 aagtgtgtatgatgttcctgccaaagccacctgttgagacaatgaaaattcatcgacaactgatcatatatgtttggatcggtttatttgagtaaagggc 10795429  T
Q  201 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795430 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 10795491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 13628790 - 13628858
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  13628790 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 13628858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 40272812 - 40272875
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  40272812 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 40272875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 54484848 - 54484785
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  54484848 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 54484785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 22609921 - 22609859
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt 22609859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 45786213 - 45786282
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| |||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  45786213 taaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggt 45786282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 5173719 - 5173787
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  5173719 aaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggt 5173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 10484616 - 10484671
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 249  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  10484616 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 516569 - 516504
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  516569 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttt 516504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 12525564 - 12525496
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||| ||||||| |||||||||||||||||    
T  12525564 aaagagcaacctggtgcagtgaagctcccgtatacacagggtctaggaaggtgtcccaccatttttggt 12525496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 13730602 - 13730670
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  13730602 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 13730670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 25517170 - 25517234
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||||| |||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  25517170 aaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt 25517234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 29366720 - 29366788
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||  ||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||    
T  29366720 aaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggt 29366788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 39203672 - 39203608
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||| |||||||||||||||||||    
T  39203672 taaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccattt 39203608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 16735597 - 16735534
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||  ||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  16735597 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 16735534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 24851301 - 24851364
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||| ||||| ||| |||||||||||||||||||    
T  24851301 aaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 52926219 - 52926282
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||| || ||||||||||||||||||||||| |||||| ||||||||||||    
T  52926219 aaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccattt 52926282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 353351 - 353417
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 46421034 - 46421103
Alignment:
Q  194 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||| | |||||||| || ||||||||||||||||||||| |||||||||||||||||| |||||    
T  46421034 aaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 46421103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 25944627 - 25944563
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| |||||||| || |||||||| |||||||||||||  ||||||||||||||||||||    
T  25944627 aaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccatttt 25944563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 30452952 - 30452892
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||    
T  30452952 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 49013473 - 49013541
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| |||||||||| || || |||||| |||||||||||||||||| |||||    
T  49013473 aaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggt 49013541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 54374349 - 54374409
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||| ||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  54374349 ggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttt 54374409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 1217245 - 1217182
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||| ||||||    
T  1217245 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccattt 1217182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 12914035 - 12914098
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||  |||||||||| ||||||||    
T  12914035 aaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccattt 12914098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 15797377 - 15797314
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  ||||||| |||| ||||||||| |||||||||||||||||||    
T  15797377 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccattt 15797314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 26869863 - 26869800
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||| | |||||||||||||||||    
T  26869863 aaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccattt 26869800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 31593004 - 31592941
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||| ||||||||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccattt 31592941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 34771364 - 34771427
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| || ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  34771364 aaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 34771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 22122918 - 22122980
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| ||||||||  ||||| |||||| ||||||||| |||||||||||||||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccattt 22122980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 26573282 - 26573224
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||| ||||||||||| |||||| |||||||||||||||| ||| ||||||||||||    
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccacca 26573224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 829454 - 829506
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||||||| ||||||||||||| | ||||||||||||||||||||    
T  829454 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccatttt 829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 14266372 - 14266431
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||||||||  ||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  14266372 aaagggcaacccagtgcactaaagctcccgcatacgcagggttcaggaa-gggtcccacca 14266431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 14987116 - 14987048
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||| |||| |||||||| ||||||||||||| ||| ||||| |||| ||||||||||||| |||||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggt 14987048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 34420643 - 34420707
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||  ||||||| |||||||| |||||||| ||||| ||||||||||||||||||||    
T  34420643 aaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccatttt 34420707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 45948850 - 45948898
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca 45948898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 47624256 - 47624208
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 242  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  47624256 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 53996565 - 53996629
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| || |||||||| |||||||| ||||||||| |||  ||||||||||||||||||||    
T  53996565 aaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccatttt 53996629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 4495676 - 4495719
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtcc 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  4495676 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 8247708 - 8247755
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  8247708 aagctcccgcatacgcagggtccgggaaggagtcccaccattattggt 8247755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 46169967 - 46170030
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| || ||| ||||||||||||||| |||| ||||||||| ||||||||||| |||||||    
T  46169967 aaagggtaatctgatgcactgaagctcccacatatgcagggtccgggaaggggtcctaccattt 46170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 54032571 - 54032614
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtcc 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  54032571 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 33926224 - 33926178
Alignment:
Q  210 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccatt 33926178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 40390398 - 40390357
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggt 235  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  40390398 aaagggcaacccggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 44403567 - 44403619
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||||| | ||||||| ||||||| ||||||||||||||||||||    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccatttt 44403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 6411834 - 6411885
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| ||||||||||||||||| ||||  ||||||||||||| |||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcattt 6411885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 45288056 - 45288111
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtccc 250  Q
    ||||||| ||||||||||| ||||||  ||||||||||||||| ||||| ||||||    
T  45288056 aagggcagcctggtgcactaaagctcttgcatacgcagggtccgggaagaggtccc 45288111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 23871523 - 23871473
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagg 244  Q
    ||||||||||| |||||||| ||| ||||||||||||||| |||| |||||    
T  23871523 aaagggcaacccggtgcactaaagttcccgcatacgcaggatccatgaagg 23871473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 40968661 - 40968611
Alignment:
Q  208 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||| ||||||||||||| | |||||| ||||||||||| |||||||||    
T  40968661 tgcactaaagctcccgcatatgtagggtctaggaaggggtctcaccatttt 40968611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 43114882 - 43114931
Alignment:
Q  208 tgcactgaagctcccgcatacgca-gggtccaggaaggggtcccaccattt 257  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaa-gggtcccaccattt 43114931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 51644116 - 51644074
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtc 248  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  51644116 ggtgcactaaagctctcgcatacccagggtccaggaaggggtc 51644074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 4835900 - 4835856
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtcc 237  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||    
T  4835900 taaaggacaacccggtgcactgaagctcacgtatacgcagggtcc 4835856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 10696213 - 10696277
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||| ||||||| | ||||||| | ||||||||||  ||||||||||||||| ||||    
T  10696213 aaagggcagcctagtgcactaatgctcccgtagacgcagggtctgggaaggggtcccaccctttt 10696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 13267860 - 13267797
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13267860 aaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 29355855 - 29355923
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  29355855 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 29355923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 6808530 - 6808468
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  6808530 aaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 9161259 - 9161197
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  9161259 aaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccatt 9161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 12221914 - 12221983
Alignment:
Q  194 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||| |||||    
T  12221914 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 12221983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 12886048 - 12885983
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||||| |||||||| |||||||| |||||||||||||  |||||||||||||||||||||    
T  12886048 aaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttt 12885983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 12892144 - 12892076
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  12892144 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 12892076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 1347097 - 1347034
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  1347097 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 1347034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 1354757 - 1354820
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  1354757 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 1354820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 24097712 - 24097649
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  24097712 aaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 383759 - 383823
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| |||| ||||||||||||||||||||||||||   ||||||||||||| ||||    
T  383759 taaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaattt 383823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 3116129 - 3116197
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||| | |||| ||| ||||||||||||||||| |||||  |||||||||||||||||||||||    
T  3116129 aaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggt 3116197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 22967312 - 22967248
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| ||| |||||||| |||| |||||||||| |||||||||| ||||||||||||||||||    
T  22967312 taaaggccaatctggtgcaatgaaactcccgcataggcagggtccaagaaggggtcccaccattt 22967248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 23821081 - 23821145
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| ||| |||||||| |||| |||||||||| |||||||||| ||||||||||||||||||    
T  23821081 taaaggccaatctggtgcaatgaaactcccgcataggcagggtccaagaaggggtcccaccattt 23821145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 10734904 - 10734965
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||| || |||| ||| ||||||||||||||||||||||| |||||||| |||||||    
T  10734904 taaagggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 23930127 - 23930188
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    ||||||||||  |||||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  23930127 aaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccat 23930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 30786378 - 30786427
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggt 247  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  30786378 ggcaacccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 2166410 - 2166478
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||| |||   ||||||| |||||||||||||||||| |||||    
T  2166410 aaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggt 2166478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 2178043 - 2178111
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||| |||   ||||||| |||||||||||||||||| |||||    
T  2178043 aaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggt 2178111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 26097293 - 26097237
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtccc 250  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||    
T  26097293 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccc 26097237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 18277193 - 18277256
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| ||||| |||||| | ||||||||||||||| || ||| ||||||||||||||||||||    
T  18277193 aaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccattt 18277256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 19340949 - 19340899
Alignment:
Q  208 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| ||||||    
T  19340949 tgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcatttt 19340899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 7947370 - 7947435
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||| ||  ||||||| |||||||| |||||||| ||||| |||||||| |||||||||||    
T  7947370 taaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccatttt 7947435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 11395896 - 11395836
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||| || |||| ||| ||||||||||||||||||| ||| ||||||||||||||||    
T  11395896 taaagggcagcc-ggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 25557858 - 25557805
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggt 247  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||    
T  25557858 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggt 25557805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 14975094 - 14975158
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||| |||||||| || |||||||||| || |||| | |||||||||||||||||| |||||    
T  14975094 ggcaacccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggt 14975158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 32579553 - 32579497
Alignment:
Q  201 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||| | ||| ||||||||||||| ||||||||  |||||||||||||||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccattt 32579497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 15865885 - 15865920
Alignment:
Q  222 cgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| |||||||||||||||||||||||||||||||    
T  15865885 cgcaaacgcagggtccaggaaggggtcccaccattt 15865920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 14553626 - 14553580
Alignment:
Q  216 agctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggt 14553580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 15866064 - 15866102
Alignment:
Q  219 tcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  15866064 tcccgcaaacgcagggtccgggaaggggtcccaccattt 15866102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 17432484 - 17432418
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    |||||||||||| |||||||| |||||||||||| | |||| ||| ||||  |||| ||||||||||    
T  17432484 taaagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccattttt 17432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 3815084 - 3815140
Alignment:
Q  201 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| |||||||| ||||| ||||||||| ||||| | |||| ||||||||||||||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccattt 3815140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 44363129 - 44363198
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44363129 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 44363198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 20639658 - 20639722
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  20639658 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttt 20639722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 5648393 - 5648330
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5648393 aaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 5648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 30690173 - 30690236
Alignment:
Q  191 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  30690173 agtaaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 30690236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 38755907 - 38755970
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  38755907 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 11394988 - 11394924
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  11394988 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 11404715 - 11404651
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  11404715 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 23501924 - 23501856
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  23501924 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggt 23501856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 30352580 - 30352648
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||  |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  30352580 aaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggt 30352648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 33836487 - 33836555
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  33836487 aaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 33836555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 14983969 - 14983906
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14983969 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14983906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 40553936 - 40553998
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  40553936 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 40915962 - 40915900
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccattt 40915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 20225212 - 20225143
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  20225212 taaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 20225143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 32484368 - 32484307
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  32484368 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 20908636 - 20908700
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||| ||||||| ||||||||||||||||||||| | ||||||||||||||||||||    
T  20908636 aaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttt 20908700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 20225117 - 20225054
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 20225054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 25388312 - 25388249
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||||||| |||||||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  25388312 taaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 25629184 - 25629121
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||| | ||||||| |||||||||||||||||||    
T  25629184 aaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccattt 25629121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 38786744 - 38786681
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  38786744 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 47444092 - 47444029
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||  ||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  47444092 aaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccattt 47444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 47482871 - 47482918
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47482871 aagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 47482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 6430627 - 6430689
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccattt 6430689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 29207900 - 29207961
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 29207961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 16408601 - 16408669
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| ||||||||| |||||||| |||||    
T  16408601 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggt 16408669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 16911699 - 16911631
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||  ||| |||||||||| |||||||||||| |||||||||||||||||| |||||    
T  16911699 aaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggt 16911631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 36816384 - 36816448
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||||| ||||    
T  36816384 aaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccaccttttt 36816448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 30639514 - 30639451
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||  ||||||| ||||||||||||| ||||||||| |||||||||| ||||||||    
T  30639514 aaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccattt 30639451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 35567305 - 35567242
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| || |||||||| ||||||||||| ||||||||| | |||||||||||||||||||    
T  35567305 aaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccattt 35567242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 35532127 - 35532077
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagg 244  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  35532127 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 44718703 - 44718641
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    |||||||||||| ||||  || ||||||||||||||||||||||  |||||||||||||||||    
T  44718703 taaagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 21647098 - 21647033
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||| |||||||| ||||||||||||| || |||||  |||||||||||||||||| |||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggt 21647033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 49796914 - 49796869
Alignment:
Q  212 ctgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||||||| | |||||||||||||||||||    
T  49796914 ctgaagctcccgcatacgcagggttcgggaaggggtcccaccattt 49796869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 54175200 - 54175135
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtcc-aggaaggggtcccaccatttt 258  Q
    |||||||| || |||||||| ||||||||||||| |||||||||  ||||||||||||||||||||    
T  54175200 aaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccatttt 54175135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 32478791 - 32478854
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| ||| |||||||  |||||||||||||||| |||||| |||||||||||||||||||    
T  32478791 taaagggccacccggtgcaca-aagctcccgcatacgctgggtccgggaaggggtcccaccattt 32478854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 54730375 - 54730319
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||| |||| |||||    
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggt 54730319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 7909281 - 7909344
Alignment:
Q  195 aagggcaacctggtgcactgaagctccc-gcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| | |||||| |||||||| ||||||||||||| | |||||||||||||||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccattt 7909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 9832313 - 9832376
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  || ||| ||||| ||||||||| |||||||||||||||||||    
T  9832313 aaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccattt 9832376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 11054148 - 11054211
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| ||||||||| || ||||||    
T  11054148 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccattt 11054211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 21489202 - 21489159
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  21489202 aagctcccgcatacgcagggttcgggaaggggtcccaccatttt 21489159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 25463256 - 25463194
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| | ||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||    
T  25463256 aaagggtagcctggtgcaca-aagctcccgcatatgcagggtccgggaaggggtcccaccattt 25463194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 47528530 - 47528593
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  ||||||| ||||  |||||||| |||||||||||||||||||    
T  47528530 aaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccattt 47528593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 48598825 - 48598888
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||| ||||| ||| ||||| |||||||||||||||||||    
T  48598825 aaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccattt 48598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 51865050 - 51865101
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| | ||||||||||||||||||||||| |||||||| ||||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccattt 51865101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 5306660 - 5306727
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccg----catacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||| | |||||||||    |||||||||||||| |||||||||||||||||||    
T  5306660 aaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccattt 5306727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 20405224 - 20405162
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||||||   |||||| ||||||||||||| || |||||| ||||||||||||||||||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 20405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 50555656 - 50555718
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| || |||||||| || |||| ||||||||||||||| ||||||||| ||||||||    
T  50555656 aaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 55830721 - 55830783
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| ||||||||||| |||||| |||||||||| ||||| ||| ||||| ||||||||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccatt 55830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 36589876 - 36589815
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||| || |||||||  ||||||||||||||  ||||| ||||||||||||||||||||||    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccatttt 36589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 37494972 - 37494923
Alignment:
Q  208 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| ||||||| ||||||||||||||| | |||||||||||||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccattt 37494923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 8473621 - 8473685
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgca-gggtcc-aggaaggggtcccaccattt 257  Q
    |||||||||| |||||||| ||||||||||||| ||| ||||||  |||||||||||||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccattt 8473685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 13256399 - 13256467
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||| | || |||| | |||||||||||||| ||| |||||    
T  13256399 aaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggt 13256467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 9987846 - 9987897
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| | ||||||||||||| ||| |||| ||||||||||||||||||||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccattt 9987897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 8820643 - 8820581
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||| ||| ||| |||||| || ||| |||||||||||||||  ||||||||||||||||||    
T  8820643 aaaggacaatctgatgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 48033449 - 48033396
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggt-cccaccatttt 258  Q
    |||||||| ||||||||||||||||| ||||||  ||||||| |||||||||||    
T  48033449 ggtgcactaaagctcccgcatacgcaaggtccacaaaggggtccccaccatttt 48033396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 7385499 - 7385539
Alignment:
Q  217 gctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccattt 7385539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 16494338 - 16494286
Alignment:
Q  210 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||| ||||| |||||||| |||||||  |||| |||||||||||||||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggt 16494286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 17043398 - 17043457
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| ||||||||| | ||||||| ||||| ||||||||  |||||||||||||||||||    
T  17043398 gggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccattt 17043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 19028046 - 19027986
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||||| || |||||||| ||||||||||||| |  |||||| |||||| |||||||||    
T  19028046 aaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 30581481 - 30581529
Alignment:
Q  210 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||| |||||||  |||| ||||||||| ||||||||||||||||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccatttt 30581529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 37038132 - 37038164
Alignment:
Q  203 cctggtgcactgaagctcccgcatacgcagggt 235  Q
    ||||||||||| |||||||||||||||||||||    
T  37038132 cctggtgcactaaagctcccgcatacgcagggt 37038164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 10543835 - 10543767
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 10543767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 14444863 - 14444800
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14444863 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 14530456 - 14530387
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  14530456 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 14530387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 9671314 - 9671251
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  9671314 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 9671251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 10546298 - 10546235
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  10546298 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 14544202 - 14544136
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  14544202 taaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttt 14544136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 8455316 - 8455379
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  8455316 aaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccattt 8455379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 40762234 - 40762297
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccattt 40762297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 23488618 - 23488553
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    |||| |||||| |||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  23488618 aaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttt 23488553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 8576031 - 8575975
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 249  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  8576031 taaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    |||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 21779261 - 21779324
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  21779261 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 21779324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 36871626 - 36871564
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  36871626 aaagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccattt 36871564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 25079717 - 25079779
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||||| |||||||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccatt 25079779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 39914306 - 39914367
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  39914306 aaagggcaacccgatgcactaaagctcccgcatacgcagggt-caggaaggggtcccaccatt 39914367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 19185764 - 19185808
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  19185764 aagctcccgcatacgcagggtccaggaaggggttccaccattttt 19185808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 24200623 - 24200691
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| |||||| | ||||| |||||||| ||||||| ||||||||||||||||    
T  24200623 aaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggt 24200691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 31158451 - 31158507
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggt 31158507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 34080236 - 34080176
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||||| |||||||| || |||||||||| ||||||||| ||||||||||||||||    
T  34080236 aaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 34766390 - 34766330
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||| |||| | |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  34766390 aaagggaaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 25249738 - 25249801
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| |||||| |||||||||||||| | ||||||| |||||||||||    
T  25249738 aaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccattt 25249801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 44643658 - 44643595
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| || |||||||| | ||||||||||||||||||||  |||||||||||||||||||    
T  44643658 aaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccattt 44643595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 5841165 - 5841103
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||||  |||||||| ||||||||||||| || |||||| ||||||||||||||||||    
T  5841165 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 5841103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 22371247 - 22371199
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 242  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  22371247 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 23397900 - 23397836
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| ||||||||  |||||||||||| | |||||||  ||||||||||||||||||    
T  23397900 taaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccattt 23397836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 11514570 - 11514508
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | |||||||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  11514570 aaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccattt 11514508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 17896395 - 17896332
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||  | |||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  17896395 aaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccattt 17896332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 24890533 - 24890486
Alignment:
Q  207 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca 24890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 124918 - 124962
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 242  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 17668137 - 17668074
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||  ||||||||||| |  |||||||| |||||||||    
T  17668137 aaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccattt 17668074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 19977714 - 19977777
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| || |||||||||| |||||||||||||| || ||| | ||||||| |||||||||||    
T  19977714 aaagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccattt 19977777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 24860000 - 24860051
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| |||||||||||||||||||||||  |||||||| | |||||||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccattt 24860051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 25632644 - 25632581
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| | ||||||  |||||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccattt 25632581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 26684632 - 26684683
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| | ||||||||||||||||||||| | ||||| |||||||||||||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccattt 26684683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 3633708 - 3633762
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtc 248  Q
    ||||||||||  |||||||| ||||||||||||| || |||||| ||||||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 13245096 - 13245158
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| | | |||| ||||||||| ||| ||| ||||| |||||||||||||||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccattt 13245158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 17380258 - 17380300
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| |||||||||||||||||||| ||| |||||    
T  17380258 aagctcccgcatccgcagggtccaggaaggggttccatcattt 17380300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 21377094 - 21377136
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  21377094 aagctcccacatacgcagggttcgggaaggggtcccaccattt 21377136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 32781309 - 32781351
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||| |||||||  |||||||||||||||||||    
T  32781309 aagctcccgcatacacagggtctgggaaggggtcccaccattt 32781351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 40416870 - 40416928
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtccca 251  Q
    |||||||||||| |||||||| |||||| |||||| ||||||||||  || ||||||||    
T  40416870 taaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtccca 40416928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 4516354 - 4516411
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||| || ||| |||| ||||| || |||||||||||||| ||||||||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccacca 4516411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 7214667 - 7214606
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    |||||||||||||||| || ||| ||||||||||| ||||  |||||| || ||||||||||    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttt 7214606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 24059012 - 24059057
Alignment:
Q  210 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    |||| |||||||| |||||||||||||| | |||||||||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccat 24059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 45235820 - 45235881
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||| |||| |||| ||||||| ||||||| ||||||  | ||||||||||||||||||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccatttt 45235881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 19615117 - 19615073
Alignment:
Q  205 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 249  Q
    ||||||||| ||||||| ||||||||||||| | |||||||||||    
T  19615117 tggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc 19615073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 33795399 - 33795359
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    |||||||||||||| |||||||  |||||||||||||||||    
T  33795399 aagctcccgcatacacagggtctgggaaggggtcccaccat 33795359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 35261814 - 35261751
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35261814 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccattt 35261751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 13160837 - 13160773
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13160837 taaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 13160773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 44530284 - 44530221
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44530284 aaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccattt 44530221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 45071398 - 45071336
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt 45071336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 39460994 - 39461062
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  39460994 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggt 39461062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 12626025 - 12625962
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  12626025 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccattt 12625962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 36720931 - 36720868
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  36720931 aaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 36720868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 28817626 - 28817688
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  28817626 aaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 28817688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 29877232 - 29877166
Alignment:
Q  191 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| |||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  29877232 agtatagggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccattt 29877166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 10857964 - 10857904
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  10857964 aaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccacca 10857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 20870060 - 20869992
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  20870060 aaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggt 20869992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 2626657 - 2626594
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||| |||||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcattt 2626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 8897764 - 8897827
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||| | ||||||||||||| ||||||||| |||||||||||||||||||    
T  8897764 aaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 8897827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 26102652 - 26102589
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  26102652 aaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 28407538 - 28407475
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||| | ||||||||||||||| ||||||| |||||||||||||||||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 30454097 - 30454160
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  30454097 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 30454160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 20284075 - 20284137
Alignment:
Q  200 caacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| |||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggt 20284137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 21070703 - 21070765
Alignment:
Q  200 caacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| |||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggt 21070765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 6760959 - 6760891
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || ||||||  ||||||||||||||||| |||||    
T  6760959 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggt 6760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 7136527 - 7136595
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||| |||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  7136527 aaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 7136595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 17823716 - 17823648
Alignment:
Q  189 tgagtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||| |||||||| ||||||| ||||| ||||||| | ||||||||| |||||||||    
T  17823716 tgagtaaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccattt 17823648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 24245563 - 24245519
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  24245563 aagctcccgcatacgcagggtccaggaaggggtcccacaattttt 24245519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 12670250 - 12670313
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| |||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  12670250 aaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 12670313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 27508044 - 27507985
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||| ||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  27508044 aaggacaacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 35107311 - 35107374
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||| |||||||| ||| |||| |||||||||||||||||||    
T  35107311 aaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 16013591 - 16013526
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||||  |||||||||| ||||||||||    
T  16013591 aaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccattttt 16013526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 16225157 - 16225088
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||| ||||| |||||||| ||||||||||||| || |||||| ||||||| |||||||||| |||||    
T  16225157 taaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggt 16225088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 27468092 - 27468141
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaag 243  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  27468092 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 25250659 - 25250591
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| || |||||||||| || |||| | |||||||||||||||||| |||||    
T  25250659 aaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggt 25250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 5135290 - 5135352
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| || |||||||  ||||||| ||||||||||||||| |||||||||||||||||||    
T  5135290 aaagggcagcccggtgcaca-aagctcctgcatacgcagggtccgggaaggggtcccaccattt 5135352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 29521685 - 29521748
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| |||||| |||||||| ||||||||||||||||||||||  ||| ||| |||||||||||    
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccattt 29521748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 44781517 - 44781572
Alignment:
Q  207 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||| ||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggt 44781572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 24365080 - 24365122
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  24365080 aagctcccacatacgcagggtccgggaaggggtcccaccattt 24365122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 44742521 - 44742582
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||| || |||||||| | |||||||||| || |||||||| |||||||||||||||||||    
T  44742521 gggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccatttt 44742582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 18164764 - 18164808
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaa 242  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 26954270 - 26954202
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||  ||||||| ||||||||||||| ||  ||||  |||||||||||||||||| |||||    
T  26954270 aaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggt 26954202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 36486567 - 36486627
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    |||||||||| || ||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  36486567 aagggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 18595969 - 18595906
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttgg 261  Q
    ||||||| | |||||| || ||||||||||| |||||||| ||||||||||| | |||||||||    
T  18595969 ggcaacccgatgcactaaaactcccgcatacacagggtccgggaaggggtcctatcatttttgg 18595906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 19729475 - 19729412
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| |  |||||||  |||||||| ||| ||||||||| |||||||||||||||||||    
T  19729475 aaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccattt 19729412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 31457307 - 31457244
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | ||||||||  ||||||||||||||||||||   ||||||||||| |||||||    
T  31457307 aaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccattt 31457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 8483950 - 8483998
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||| || ||||||||||||||||||||||  ||| ||||||||||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca 8483998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 30962770 - 30962814
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtcc 237  Q
    |||||||||||| ||| |||| || ||||||||||||||||||||    
T  30962770 taaagggcaacccggttcactaaatctcccgcatacgcagggtcc 30962814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 7879773 - 7879710
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7879773 aaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 7879710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 45018923 - 45018988
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagtttt 45018988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 40464011 - 40463948
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  40464011 aaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccattt 40463948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 11617589 - 11617651
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccattt 11617651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 2541018 - 2541082
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||| |||| |||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  2541018 taaagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattt 2541082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 39124030 - 39123962
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||| | ||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  39124030 aaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggt 39123962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 42805661 - 42805593
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  42805661 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 42805593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 48735121 - 48735185
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  48735121 taaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 48735185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 18747621 - 18747562
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccacca 18747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 21172009 - 21172072
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  21172009 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 21172072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 27629769 - 27629706
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||||||||||    
T  27629769 aaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccattt 27629706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 27889316 - 27889379
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||| ||  ||||||||||||||||||||||| |||||||||||||||||||    
T  27889316 aaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 27889379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 32758394 - 32758331
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  32758394 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 32758331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 35787269 - 35787332
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||| ||||||    
T  35787269 aaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccattt 35787332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 42391100 - 42391163
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  42391100 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 42391163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 33500635 - 33500585
Alignment:
Q  209 gcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttt 33500585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 47716597 - 47716528
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| |||||||  ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  47716597 taaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 47716528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 10693072 - 10693136
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||  |||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  10693072 taaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 10693136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 18512455 - 18512515
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||||  ||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 33871909 - 33871973
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| |||||||||||||||| |||||| ||||||| |||||||  |||||||||||||||||||    
T  33871909 taaaaggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccattt 33871973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 35334818 - 35334878
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||| |||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatt 35334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 3469176 - 3469243
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||  | ||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  3469176 aagggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggt 3469243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 11888473 - 11888414
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccac 252  Q
    ||||||||||||  ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  11888473 taaagggcaacccagtgcactgaagctcctgcatacacagggtccagaaaggggtcccac 11888414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 31591109 - 31591172
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||| ||||| |||||||||||||||||||    
T  31591109 aaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccattt 31591172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 34626208 - 34626271
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| | || ||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  34626208 aaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccattt 34626271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 13805215 - 13805173
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  13805215 aagctcccgcatacgcagggtccaggaagtggtcccaccattt 13805173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 42477005 - 42476943
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||  |||||||||||| |||| | | ||||||||||||||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccattt 42476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 43557610 - 43557541
Alignment:
Q  194 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| || |||||||||||||||| |||| ||| |||||||||||||| |||||    
T  43557610 aaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggt 43557541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 29907552 - 29907491
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||||| |||||||| |||||||||||||  |||||||| ||| ||||||||||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccatttt 29907491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 19426890 - 19426952
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||  ||| ||||||||||||||    
T  19426890 aaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccattt 19426952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 38262196 - 38262259
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | |||||||| |||||||||||||||||| || | ||||||||||||| |||||    
T  38262196 aaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcattt 38262259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 42798804 - 42798741
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| | ||||||  |||||||||||| ||||||||| |||| ||||||||||||||    
T  42798804 aaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccattt 42798741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 22698966 - 22699036
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccagg-aaggggtcccaccatttttggt 262  Q
    ||||||| |||| ||||||||  ||||||||||||| |||||||| || || |||||||||||||||||||    
T  22698966 taaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggt 22699036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 23419671 - 23419737
Alignment:
Q  191 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| || | |||||| |||| |||||| ||||| |||| ||||||||||||||||||||    
T  23419671 agtaaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccattt 23419737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 36602582 - 36602540
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtc 236  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  36602582 aaagggcaacccggtgcactaaagctcccgcatacgcagggtc 36602540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 21566559 - 21566507
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||||||||||||| ||||||| | ||||||||||| ||||||||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccatttt 21566507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 23231694 - 23231630
Alignment:
Q  192 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| |||  |||||||| ||||| ||||||||||||||| | ||||||||||||| ||||    
T  23231694 gtaaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcatt 23231630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 42495865 - 42495913
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggg 245  Q
    |||||||  |||||||| ||||||||||||||||||||||| |||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 35203555 - 35203508
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||||||| || || ||||||||| ||||||||||||||||    
T  35203555 aagctcccgcatacgtagagttcaggaagggatcccaccatttttggt 35203508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 257
Target Start/End: Complemental strand, 1408563 - 1408529
Alignment:
Q  223 gcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||| |||||||||||||||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccattt 1408529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 19266564 - 19266522
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaattt 19266522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 38604640 - 38604598
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||||||||| | |||||||| ||||||||    
T  38604640 aagctcccgcatacgcagggtccggaaaggggtctcaccattt 38604598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 25434143 - 25434106
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaag 243  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  25434143 ggtgcactaaagctcccgcatacgcagggtccaagaag 25434106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 4349798 - 4349733
Alignment:
Q  192 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  4349798 gtaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 4349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 35005283 - 35005215
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  35005283 aaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggt 35005215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 50606561 - 50606493
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  50606561 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggt 50606493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 10668385 - 10668317
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||||||| |||||    
T  10668385 aaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggt 10668317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 46247953 - 46248016
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  46247953 aaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 46248016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 4587568 - 4587626
Alignment:
Q  199 gcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 27474438 - 27474376
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27474438 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 27474376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 18944804 - 18944735
Alignment:
Q  194 aaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||| |||||    
T  18944804 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggt 18944735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 42304207 - 42304272
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||| | |||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  42304207 aaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttt 42304272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 18741957 - 18742025
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||| |||| |||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||    
T  18741957 aaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggt 18742025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 19701729 - 19701665
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||| | ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  19701729 aaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccatttt 19701665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 27201807 - 27201739
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||   |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  27201807 aaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggt 27201739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 45402251 - 45402191
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 45402191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 31382214 - 31382277
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||| || | ||||||||||||| |||||||||||||||||||||||||||||    
T  31382214 aaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccattt 31382277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 34725098 - 34725161
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  34725098 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 34725161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 46991959 - 46991900
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccatt 46991900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 11596649 - 11596607
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11596649 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 11596607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 19932755 - 19932821
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||||||||| | | ||  ||||||||||||||| ||||||||||||||||||||||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggt 19932821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 9939622 - 9939553
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtcc-aggaaggggtcccaccatttttggt 262  Q
    |||||| |||| |||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||    
T  9939622 aaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggt 9939553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 10378738 - 10378798
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| || |||||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccattt 10378798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 20004090 - 20004158
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||| || |||||  |||||||||||||||||| |||||    
T  20004090 aaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggt 20004158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 30395726 - 30395794
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||  |||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  30395726 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 30395794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 14617196 - 14617133
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| |||| |||||||| ||||||||||||| ||||||||| ||||||| |||||||||||    
T  14617196 aaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccattt 14617133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 19414595 - 19414532
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||| | |||||||||||||||||||    
T  19414595 aaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccattt 19414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 32632557 - 32632620
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| ||||||||||||| ||||||||||||| |||||||   |||||||||||||||||||    
T  32632557 aaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccattt 32632620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 35253187 - 35253250
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  35253187 aaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 35253250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 6925246 - 6925196
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatt 6925196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 15511150 - 15511212
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||| || |||||||| |||||| | |||||||||||||||||||||||| ||||||||||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccatttt 15511212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 1517311 - 1517371
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||   |||||||||||||||    
T  1517311 aaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca 1517371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 30555261 - 30555210
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| |||||| ||||||||||||||||  ||||||||||||||||||    
T  30555261 ggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 33594144 - 33594191
Alignment:
Q  207 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 38478282 - 38478345
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| |||||||||  |||||||| |||||||||    
T  38478282 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccattt 38478345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 47214667 - 47214604
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| || ||||||||||  |||||||||||| ||||||||  |||||||||||||||||||    
T  47214667 aaagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccattt 47214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 15505701 - 15505659
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  15505701 aagctcccgcatacgcagggttcgggaaggggtcccaccattt 15505659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 22325049 - 22324984
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||| ||||||||||| ||||||||||||||||||||| | ||| ||||  ||||||||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggt-cgggacggggctccaccatttttggt 22324984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 30682949 - 30682907
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  30682949 aagctcccgcatacgcacggtccgggaaggggtcccaccattt 30682907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 52910379 - 52910321
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat 255  Q
    ||||| ||||||||||| ||| |||| |||||| ||| |||||||||||||||||||||    
T  52910379 gggcagcctggtgcactaaagttcccacatacggaggttccaggaaggggtcccaccat 52910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 23768334 - 23768383
Alignment:
Q  208 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccattt 23768383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 35117777 - 35117834
Alignment:
Q  206 ggtgcactgaagctcccgcat-acgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||| ||||||| |||| ||||||||||| ||||||||||||| ||||||||||    
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggt 35117834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 27136663 - 27136715
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||| ||||||||||||| || | || |||||||||||||||||||||    
T  27136663 ggtgcactggagctcccgcatacacatgatctaggaaggggtcccaccatttt 27136715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 43768297 - 43768237
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||||| || |||||| | ||||||||| ||||||||||||  ||||||||||||||||    
T  43768297 aaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca 43768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 45264411 - 45264463
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||||||||||||| ||||||||   |||||||||||||||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccatttt 45264463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 6983811 - 6983874
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| || |||||||  ||||||| || |||||||||||| | |||||||||||||||||    
T  6983811 aaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccattt 6983874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 8197201 - 8197138
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||| |||| |||||||  ||||||||||||||  |||||||||| |||||||    
T  8197201 aaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccattt 8197138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 12126837 - 12126900
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||   |||||||  |||||||||||| ||||||||| |||||||||||||| ||||    
T  12126837 aaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaattt 12126900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 16120874 - 16120819
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcc 249  Q
    |||||||| ||||||||| | ||||||||||||| |||||| || |||||||||||    
T  16120874 aaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 41319806 - 41319869
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||  |||||||||| |||||||||| | ||||| | ||||||||||||| |||||    
T  41319806 aaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcattt 41319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 45812541 - 45812600
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||| ||||||||  |||||||||||| |||||||   |||||||||||||||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccattt 45812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 4430008 - 4430062
Alignment:
Q  203 cctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| ||||| |||||||||||||| |||| ||||| ||||||| |||||||||    
T  4430008 cctggagcactaaagctcccgcatacacaggatccagaaaggggttccaccattt 4430062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 28894561 - 28894611
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggt 247  Q
    ||||| ||||||||||| |||||| |||||| |||||||| ||||||||||    
T  28894561 gggcagcctggtgcactaaagctctcgcatatgcagggtctaggaaggggt 28894611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 5549677 - 5549613
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattttt 259  Q
    ||||||||||||| || ||| ||||||| ||||| |||| |||||| ||||||||||| |||||||    
T  5549677 aaagggcaacctg-tgtactaaagctcctgcataggcagagtccagaaaggggtcccatcattttt 5549613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 31442396 - 31442453
Alignment:
Q  201 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||| |||||||  |||||||| ||||| ||| |||| ||||||||||||||||||||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccatttt 31442453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 2435798 - 2435850
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| |||||||||||| || ||||| | | ||||||||||||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccatttt 2435850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 6358264 - 6358216
Alignment:
Q  210 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||| ||| ||| ||||||||||||||  ||||||||||||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccatttt 6358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 22930104 - 22930132
Alignment:
Q  229 gcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||||||||||||    
T  22930104 gcagggtccaggaaggggtcccaccattt 22930132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 34148983 - 34149023
Alignment:
Q  217 gctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| ||||| |||||||||||||||||||| ||||||||    
T  34148983 gctcctgcatatgcagggtccaggaaggggtctcaccattt 34149023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 37299633 - 37299573
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacc 253  Q
    ||||||||| ||| ||||||| |||||| ||||| | || ||||| |||||||||||||||    
T  37299633 taaagggcagcctagtgcactaaagctctcgcatgcacatggtccgggaaggggtcccacc 37299573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 41440618 - 41440666
Alignment:
Q  210 cactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||| |||||||||||||| ||| ||| |||||||||| ||||||||||    
T  41440618 cactaaagctcccgcatacacagagtctaggaaggggttccaccatttt 41440666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 38879718 - 38879650
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  38879718 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 38879650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 16957449 - 16957386
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16957449 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 25622595 - 25622527
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggt 25622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 43334339 - 43334272
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  43334339 aaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggt 43334272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 8169984 - 8170047
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  8169984 aaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccattt 8170047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 24449025 - 24448962
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  24449025 aaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattt 24448962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 41014453 - 41014390
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  41014453 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccattt 41014390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 12575659 - 12575724
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||| || |||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  12575659 taaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccatttt 12575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 20135740 - 20135673
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||| |||||||||||||||| ||||| || |||||| |||||||||||||||||| |||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggt 20135673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 32703557 - 32703494
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  32703557 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 32703494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 1565572 - 1565504
Alignment:
Q  188 ttgagtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||| |||||||||||| ||||||    
T  1565572 ttgagtaaagggcaacccggtgcact-aagctcccacatatgcagggtccgggaaggggtcccgccattt 1565504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 13801766 - 13801835
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| |||||||| |||||| |||||| || |||||| |||||||||||||||||| |||||    
T  13801766 taaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggt 13801835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 4619104 - 4619172
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||| |||||||| |||||| |||||| || |||||| |||||||||||||||||| |||||    
T  4619104 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggt 4619172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 7097759 - 7097823
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | ||||||||| ||||||||||||||||||||| | |||||||||| ||||||||    
T  7097759 taaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccattt 7097823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 34154813 - 34154877
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||| ||||||||  |||| ||||||| ||||||||| |||||||||||||||||||    
T  34154813 taaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccattt 34154877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 10306495 - 10306538
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10306495 aagctcccgcatacgcagggtccgggaaggggtcccaccatttt 10306538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 12006329 - 12006396
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||  |||||||| ||||||||||||| ||||||||  |||||||||||||||||| |||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggt 12006396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 16028624 - 16028683
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacc 253  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||    
T  16028624 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 43574729 - 43574678
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 43574678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 21784335 - 21784396
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||  |||||||| || |||||||||||||||||||| | ||||||||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 208939 - 208991
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||||||  |||||| |||||||||||||||||||||||||||||    
T  208939 ggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccatttt 208991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 16880646 - 16880710
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||| |||| |||||||| ||||||||||||||||| ||||| ||||| |||| ||||||||    
T  16880646 taaagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccattt 16880710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 28516433 - 28516497
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||||||||| |||| ||||||| |||| |||||||||  |||| |||||||||||||||    
T  28516433 aaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccatttt 28516497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 30877563 - 30877623
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacc 253  Q
    |||||||||||| ||||||||  ||||||| |||| ||||||||| |||||||||||||||    
T  30877563 taaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  198 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||| |||||||| ||||||||||||||| ||||||  ||||||||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 1850762 - 1850711
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||| ||||| |||||| |||||||||||||||| |||||||||||||    
T  1850762 ggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccattt 1850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 27328868 - 27328821
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||    
T  27328868 aagctcccgcatacgcagggttcgggaaggggtcccaccattattggt 27328821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 32354262 - 32354211
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggg 245  Q
    ||||||||||| |||||||| |||||||||||||| |||||||| |||||||    
T  32354262 aaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 35710446 - 35710383
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||| | ||| |||||||||||||||||||    
T  35710446 aaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccattt 35710383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 19142956 - 19143006
Alignment:
Q  207 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||| || |||||||||||||| ||||| |||||||||||||||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccattt 19143006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 7368528 - 7368471
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||||| ||||||||  ||||||| |||| ||||||||| ||||||||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca 7368471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 21542489 - 21542530
Alignment:
Q  216 agctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccattt 21542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 3771474 - 3771414
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    |||||||| || |||||||| |||||||| ||||| ||| |||| ||||||||||||||||    
T  3771474 aaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccacca 3771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 30006461 - 30006397
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| ||||||| |||||||| ||||||||||||||  |||  || |||||||||||||||||||    
T  30006461 taaaaggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccattt 30006397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 1405322 - 1405259
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | |||| |||  |||||||||||| ||||||| |||||| ||||||||||||||    
T  1405322 aaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccattt 1405259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 19438800 - 19438758
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtcc 237  Q
    |||||||||||||||||||  |||||||||||| |||||||||    
T  19438800 aagggcaacctggtgcactagagctcccgcatatgcagggtcc 19438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 22600568 - 22600526
Alignment:
Q  215 aagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  22600568 aagctcccgcatacgcaggatccgggaagggatcccaccattt 22600526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 29334531 - 29334469
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| || |||||| | ||| |||| |||||||||||||| |||| |||||||||||||    
T  29334531 aaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccatt 29334469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 2838899 - 2838850
Alignment:
Q  208 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||| || |||||||||||||||||||||  |||||| |||||||||||    
T  2838899 tgcaccgatgctcccgcatacgcagggtccgagaagggatcccaccattt 2838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 4654426 - 4654479
Alignment:
Q  205 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||||||| ||||||||||||| ||||||| |  |||||| ||||||||||||    
T  4654426 tggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccatttt 4654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 5873321 - 5873382
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccacca 254  Q
    ||||||||| || | |||||| |||||||||||||||||| |||| || ||| |||||||||    
T  5873321 taaagggcatcccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccacca 5873382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 29184062 - 29184103
Alignment:
Q  195 aagggcaacctggtgcactgaagctcccgcatacgcagggtc 236  Q
    |||||||||| |||||||| ||||||||||||||||| ||||    
T  29184062 aagggcaacccggtgcactaaagctcccgcatacgcatggtc 29184103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 10943845 - 10943900
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtccc 250  Q
    |||||||| || |||||||| ||||||||||||  ||||||||| ||||||||||||    
T  10943845 aaagggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 12477132 - 12477184
Alignment:
Q  206 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| ||||||  ||||||||||  ||| ||||||||||||||||||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccatttt 12477184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 19093948 - 19093884
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    |||||||| || |||||||| |||||||  |||||||||||||| || |||||||  ||||||||    
T  19093948 aaagggcagcccggtgcactaaagctccaacatacgcagggtccgggtaggggtcataccatttt 19093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 7e-21; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 46966 - 46903
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  46966 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 46903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 24772 - 24835
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| | |||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  24772 aaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattt 24835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 46710 - 46771
Alignment:
Q  197 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttt 258  Q
    ||||| |||| |||| | ||||||||||||||||||||||  ||||||||||||||||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccatttt 46771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 43793 - 43729
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtcc-aggaaggggtcccaccattt 257  Q
    ||||||||||   |||||||  |||||||||||| ||||||||| || |||||||||||||||||    
T  43793 aaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccattt 43729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 11267 - 11201
Alignment:
Q  191 agtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| |||||| ||||||||||||    
T  11267 agtaaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccattt 11201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 59115 - 59046
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggt 262  Q
    |||||||||||| | |||||| |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  59115 taaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggt 59046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 1586 - 1650
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |||||    
T  1586 taaaaggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcattt 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 10945 - 10882
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  10945 aaagagcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 30712 - 30649
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  30712 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 30649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 72867 - 72930
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| | |||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccattt 72930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 48634 - 48697
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  48634 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 48697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 13024 - 13086
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||||| |||||||| |||| |||||||||||||||||  ||||||||||||||||||    
T  13024 aaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccatt 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 24133 - 24196
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| | ||||||||  |||||||||||| ||||||||| |||||||||||||||||||    
T  24133 aaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 24196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 10052 - 10113
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| ||||||||| |||||| ||||| ||||||||| |||||||||||||| ||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactattt 10113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 20380 - 20441
Alignment:
Q  196 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 257  Q
    ||||||||| ||||||||| |||||| ||||| ||||||||| |||||||||||||| ||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactattt 20441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 57738 - 57802
Alignment:
Q  71 acataccactatagcacctattctttgtagaagtgtgtatgatgttcctgccaaagccacctgtt 135  Q
    ||||||||| |||||||||||||| |||| ||| |  ||||||||||| ||||||||||||||||    
T  57738 acataccacaatagcacctattctctgtataagggaatatgatgttccagccaaagccacctgtt 57802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 3681 - 3617
Alignment:
Q  192 gtaaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    |||||||| |||  |||||||| ||||| ||||||||||||||| | ||||||||||||| ||||    
T  3681 gtaaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcatt 3617  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 58629 - 58691
Alignment:
Q  193 taaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 256  Q
    ||||||||| |||||||||| || |||||||||||| ||||||||  ||||||||| |||||||    
T  58629 taaagggcagcctggtgcacaga-gctcccgcatacacagggtccgagaaggggtctcaccatt 58691  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 24783 - 24741
Alignment:
Q  194 aaagggcaacctggtgcactgaagctcccgcatacgcagggtc 236  Q
    ||||||||| | |||||||||||||||||| ||||||||||||    
T  24783 aaagggcaatcaggtgcactgaagctcccgtatacgcagggtc 24741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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