View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8617_low_14 (Length: 232)

Name: NF8617_low_14
Description: NF8617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8617_low_14
NF8617_low_14
[»] chr7 (29 HSPs)
chr7 (122-214)||(20028951-20029043)
chr7 (122-201)||(35091360-35091438)
chr7 (122-201)||(35076837-35076915)
chr7 (126-162)||(1857498-1857534)
chr7 (126-162)||(6850956-6850992)
chr7 (126-162)||(28416247-28416283)
chr7 (1-53)||(17014291-17014345)
chr7 (126-162)||(8911534-8911570)
chr7 (126-162)||(15765110-15765146)
chr7 (126-177)||(827464-827515)
chr7 (126-177)||(829475-829526)
chr7 (126-177)||(839275-839326)
chr7 (1-53)||(846570-846624)
chr7 (1-53)||(853945-853999)
chr7 (126-177)||(1204455-1204506)
chr7 (1-53)||(1211949-1212003)
chr7 (1-53)||(5647362-5647416)
chr7 (1-53)||(8811663-8811717)
chr7 (1-53)||(8819478-8819532)
chr7 (1-53)||(9462167-9462221)
chr7 (1-53)||(9475925-9475979)
chr7 (1-53)||(12979692-12979746)
chr7 (1-53)||(16386842-16386896)
chr7 (1-53)||(16400969-16401023)
chr7 (1-53)||(23876932-23876986)
chr7 (1-53)||(23885788-23885842)
chr7 (1-47)||(8911413-8911461)
chr7 (7-53)||(46460909-46460957)
chr7 (126-177)||(8955140-8955192)
[»] chr6 (31 HSPs)
chr6 (122-209)||(14777840-14777927)
chr6 (126-179)||(22330734-22330787)
chr6 (7-47)||(14777725-14777765)
chr6 (126-162)||(25493352-25493388)
chr6 (126-162)||(25505425-25505461)
chr6 (126-162)||(28701799-28701835)
chr6 (1-53)||(18090996-18091050)
chr6 (126-162)||(1551229-1551265)
chr6 (126-162)||(10983957-10983993)
chr6 (126-158)||(19170780-19170812)
chr6 (1-53)||(614230-614284)
chr6 (1-53)||(622150-622204)
chr6 (1-53)||(14073343-14073397)
chr6 (1-53)||(16815254-16815308)
chr6 (1-53)||(16824009-16824063)
chr6 (1-53)||(20458241-20458295)
chr6 (1-53)||(21748427-21748481)
chr6 (1-53)||(22763645-22763699)
chr6 (1-53)||(24141807-24141861)
chr6 (1-53)||(30435551-30435605)
chr6 (2-53)||(26980689-26980742)
chr6 (2-53)||(27073079-27073132)
chr6 (126-176)||(27073200-27073250)
chr6 (1-51)||(4466328-4466380)
chr6 (7-53)||(18910308-18910356)
chr6 (1-51)||(20451421-20451473)
chr6 (126-158)||(2408472-2408504)
chr6 (126-158)||(2408902-2408934)
chr6 (1-50)||(12393456-12393507)
chr6 (126-162)||(19714783-19714819)
chr6 (126-162)||(19720976-19721012)
[»] chr3 (37 HSPs)
chr3 (126-201)||(18692646-18692720)
chr3 (126-201)||(18708016-18708090)
chr3 (126-201)||(49965540-49965614)
chr3 (126-162)||(3412370-3412406)
chr3 (126-162)||(9524252-9524288)
chr3 (126-162)||(9553967-9554003)
chr3 (126-162)||(11182555-11182591)
chr3 (126-162)||(13104549-13104585)
chr3 (126-162)||(13110705-13110741)
chr3 (126-162)||(14880165-14880201)
chr3 (126-162)||(16030247-16030283)
chr3 (126-162)||(12558959-12558995)
chr3 (126-162)||(14892022-14892058)
chr3 (126-162)||(43099340-43099376)
chr3 (1-53)||(69381-69435)
chr3 (1-53)||(75474-75528)
chr3 (1-53)||(2253507-2253561)
chr3 (1-53)||(3412474-3412528)
chr3 (1-53)||(5649973-5650027)
chr3 (1-53)||(8607397-8607451)
chr3 (1-53)||(11628227-11628281)
chr3 (1-53)||(12478080-12478134)
chr3 (1-53)||(13104427-13104481)
chr3 (1-53)||(14322576-14322630)
chr3 (1-53)||(15527343-15527397)
chr3 (1-53)||(15536032-15536086)
chr3 (1-53)||(15629014-15629068)
chr3 (1-53)||(21637364-21637418)
chr3 (1-53)||(23286924-23286978)
chr3 (1-53)||(30013169-30013223)
chr3 (1-53)||(37254459-37254513)
chr3 (1-53)||(37264299-37264353)
chr3 (126-158)||(69281-69313)
chr3 (126-158)||(75374-75406)
chr3 (1-50)||(6195609-6195660)
chr3 (1-50)||(6203193-6203244)
chr3 (1-50)||(49965418-49965469)
[»] chr5 (41 HSPs)
chr5 (123-179)||(18956906-18956962)
chr5 (123-179)||(33312858-33312914)
chr5 (126-162)||(10058916-10058952)
chr5 (126-162)||(15955926-15955962)
chr5 (126-162)||(20091710-20091746)
chr5 (126-162)||(20098574-20098610)
chr5 (126-162)||(36449370-36449406)
chr5 (126-162)||(36455758-36455794)
chr5 (126-162)||(37049492-37049528)
chr5 (126-177)||(21826432-21826483)
chr5 (1-53)||(23689769-23689823)
chr5 (140-179)||(33304259-33304298)
chr5 (126-159)||(25041176-25041209)
chr5 (126-162)||(23348973-23349009)
chr5 (126-162)||(38226877-38226913)
chr5 (1-53)||(1799375-1799429)
chr5 (1-53)||(5433903-5433957)
chr5 (1-53)||(5447719-5447773)
chr5 (1-53)||(11938017-11938071)
chr5 (1-53)||(11951941-11951995)
chr5 (1-53)||(12385725-12385779)
chr5 (1-53)||(12394418-12394472)
chr5 (1-53)||(17949689-17949743)
chr5 (1-53)||(17963578-17963632)
chr5 (1-53)||(20638636-20638690)
chr5 (1-53)||(21727314-21727368)
chr5 (1-53)||(23377088-23377142)
chr5 (1-53)||(25448729-25448783)
chr5 (126-157)||(25527320-25527351)
chr5 (126-157)||(25534004-25534035)
chr5 (1-53)||(26546704-26546758)
chr5 (126-177)||(26870147-26870198)
chr5 (1-53)||(29894337-29894391)
chr5 (1-53)||(30250441-30250495)
chr5 (1-53)||(31512890-31512944)
chr5 (1-53)||(31527015-31527069)
chr5 (1-53)||(36449474-36449528)
chr5 (1-53)||(36455862-36455916)
chr5 (1-51)||(25534105-25534157)
chr5 (126-158)||(29894236-29894268)
chr5 (126-158)||(29902958-29902990)
[»] scaffold0029 (3 HSPs)
scaffold0029 (126-179)||(36434-36488)
scaffold0029 (1-53)||(21767-21821)
scaffold0029 (1-53)||(36311-36365)
[»] chr8 (22 HSPs)
chr8 (142-199)||(23640697-23640754)
chr8 (126-162)||(25851979-25852015)
chr8 (126-179)||(32024546-32024601)
chr8 (126-161)||(22155895-22155930)
chr8 (126-161)||(22161903-22161938)
chr8 (126-162)||(25858175-25858211)
chr8 (1-53)||(14890174-14890228)
chr8 (1-53)||(15708788-15708842)
chr8 (1-53)||(21473581-21473635)
chr8 (1-53)||(32000987-32001041)
chr8 (1-53)||(32007944-32007998)
chr8 (126-179)||(6032267-6032320)
chr8 (126-179)||(16738377-16738430)
chr8 (7-53)||(25706646-25706694)
chr8 (7-53)||(25851863-25851911)
chr8 (1-51)||(27806706-27806758)
chr8 (1-51)||(32024423-32024475)
chr8 (126-178)||(20726969-20727021)
chr8 (126-178)||(20734881-20734933)
chr8 (126-178)||(20739867-20739919)
chr8 (126-178)||(20743439-20743491)
chr8 (4-53)||(24653413-24653464)
[»] chr4 (24 HSPs)
chr4 (126-179)||(14437562-14437615)
chr4 (126-162)||(17801-17837)
chr4 (126-162)||(22173952-22173988)
chr4 (126-162)||(38854469-38854505)
chr4 (126-177)||(9185522-9185573)
chr4 (126-177)||(9191387-9191438)
chr4 (126-162)||(3381356-3381392)
chr4 (126-162)||(3388098-3388134)
chr4 (126-162)||(50188817-50188853)
chr4 (1-53)||(3441278-3441332)
chr4 (1-53)||(7114226-7114280)
chr4 (1-53)||(7945909-7945963)
chr4 (126-177)||(9185969-9186020)
chr4 (1-53)||(14882767-14882821)
chr4 (1-53)||(14926777-14926831)
chr4 (1-53)||(20840994-20841048)
chr4 (1-53)||(25986384-25986438)
chr4 (1-53)||(39743704-39743758)
chr4 (1-51)||(14437684-14437736)
chr4 (126-179)||(15566237-15566290)
chr4 (126-179)||(15578884-15578937)
chr4 (126-162)||(19736907-19736943)
chr4 (126-162)||(39743827-39743863)
chr4 (126-158)||(47877488-47877520)
[»] scaffold0970 (1 HSPs)
scaffold0970 (126-162)||(356-392)
[»] scaffold0306 (1 HSPs)
scaffold0306 (126-162)||(16763-16799)
[»] scaffold0202 (1 HSPs)
scaffold0202 (126-162)||(26030-26066)
[»] scaffold0096 (2 HSPs)
scaffold0096 (126-162)||(291-327)
scaffold0096 (1-53)||(169-223)
[»] scaffold0085 (1 HSPs)
scaffold0085 (127-179)||(17664-17716)
[»] scaffold0083 (1 HSPs)
scaffold0083 (126-162)||(24854-24890)
[»] scaffold0075 (1 HSPs)
scaffold0075 (126-162)||(57499-57535)
[»] scaffold0066 (1 HSPs)
scaffold0066 (126-162)||(42964-43000)
[»] scaffold0028 (1 HSPs)
scaffold0028 (126-162)||(69029-69065)
[»] chr2 (15 HSPs)
chr2 (126-162)||(5870057-5870093)
chr2 (126-162)||(5873168-5873204)
chr2 (126-162)||(29586274-29586310)
chr2 (126-162)||(36736412-36736448)
chr2 (129-162)||(17174-17207)
chr2 (126-179)||(18501310-18501363)
chr2 (1-53)||(12376254-12376308)
chr2 (1-53)||(12390081-12390135)
chr2 (1-53)||(21066446-21066500)
chr2 (1-53)||(21070198-21070252)
chr2 (1-53)||(29586378-29586432)
chr2 (1-53)||(36736516-36736570)
chr2 (7-53)||(24700189-24700237)
chr2 (126-178)||(378091-378143)
chr2 (126-162)||(38083421-38083457)
[»] chr1 (18 HSPs)
chr1 (126-162)||(9009527-9009563)
chr1 (126-162)||(15472788-15472824)
chr1 (126-162)||(44831473-44831509)
chr1 (1-53)||(28426583-28426637)
chr1 (126-162)||(2415652-2415688)
chr1 (126-162)||(18099421-18099457)
chr1 (1-53)||(2334149-2334203)
chr1 (1-53)||(5622519-5622573)
chr1 (1-53)||(5636658-5636712)
chr1 (1-53)||(9009631-9009685)
chr1 (126-177)||(14803694-14803745)
chr1 (126-177)||(14819172-14819223)
chr1 (1-53)||(22114702-22114756)
chr1 (1-53)||(35076972-35077026)
chr1 (126-177)||(52101063-52101114)
chr1 (7-53)||(47109599-47109647)
chr1 (4-53)||(2415533-2415584)
chr1 (4-53)||(26198478-26198529)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-53)||(5150-5204)
[»] scaffold0167 (2 HSPs)
scaffold0167 (1-53)||(245-299)
scaffold0167 (126-162)||(140-176)
[»] scaffold0132 (1 HSPs)
scaffold0132 (126-177)||(25134-25185)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-53)||(15062-15116)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-53)||(54740-54794)
[»] scaffold0107 (1 HSPs)
scaffold0107 (126-162)||(1307-1343)
[»] scaffold0067 (1 HSPs)
scaffold0067 (126-158)||(42819-42851)
[»] scaffold0020 (1 HSPs)
scaffold0020 (126-162)||(104899-104935)
[»] scaffold1855 (1 HSPs)
scaffold1855 (1-53)||(1232-1286)
[»] scaffold0755 (1 HSPs)
scaffold0755 (1-53)||(2540-2594)
[»] scaffold0573 (1 HSPs)
scaffold0573 (1-53)||(1625-1679)
[»] scaffold0478 (1 HSPs)
scaffold0478 (1-53)||(1310-1364)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-53)||(12823-12877)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-53)||(2878-2932)
[»] scaffold0155 (1 HSPs)
scaffold0155 (126-177)||(21883-21934)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-53)||(35057-35111)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-53)||(1528-1582)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-53)||(88657-88711)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-53)||(15323-15377)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-53)||(201059-201113)
[»] scaffold0044 (2 HSPs)
scaffold0044 (128-177)||(64369-64418)
scaffold0044 (126-175)||(80767-80816)
[»] scaffold0473 (1 HSPs)
scaffold0473 (126-177)||(7379-7431)
[»] scaffold0327 (1 HSPs)
scaffold0327 (126-178)||(2007-2059)


Alignment Details
Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 20029043 - 20028951
Alignment:
Q  122 gccaaagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaaacatttgattaag 214  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20029043 gccaaagttgcaaatgagtatttgtttgtgttttttaatattaaagaaaatggactcatggtaaagattaaattgattaaacatttgattaag 20028951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 35091438 - 35091360
Alignment:
Q  122 gccaaagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||| |||||||||    
T  35091438 gccaaagtggcaaatgagtatttgtttgtgttttttaatattaaagaaaatagactcatgataaa-attagattgattaa 35091360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 35076915 - 35076837
Alignment:
Q  122 gccaaagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaa 201  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||| |||||||||    
T  35076915 gccaaagtggcaaacgagtatttgtttgtgttttttaatattaaagaaaatagactcatgataaa-attagattgattaa 35076837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 1857498 - 1857534
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  1857498 aagtggcaaatgagtatttgtttgtgttttttaatat 1857534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 6850956 - 6850992
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  6850956 aagtggcaaatgagtatttgtttgtgttttttaatat 6850992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 28416283 - 28416247
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  28416283 aagtggcaaatgagtatttgtttgtgttttttaatat 28416247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17014291 - 17014345
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  17014291 gacatggtcctctgcctacgtacctgtgagggatcaaaacctcgtagttcggggt 17014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 8911534 - 8911570
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8911534 aagtgacaaatgagtatttgtttgtgttttttaatat 8911570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 15765110 - 15765146
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||| ||||    
T  15765110 aagtggcaaatgagtatttgtttgtgttttttgatat 15765146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 827515 - 827464
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  827515 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 827464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 829526 - 829475
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  829526 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 829475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 839326 - 839275
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  839326 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 839275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 846624 - 846570
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  846624 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 846570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 853999 - 853945
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  853999 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 853945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 1204506 - 1204455
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  1204506 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 1204455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1212003 - 1211949
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  1212003 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 1211949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5647362 - 5647416
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  5647362 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 5647416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8811717 - 8811663
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  8811717 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 8811663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8819532 - 8819478
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  8819532 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 8819478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9462221 - 9462167
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  9462221 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 9462167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9475979 - 9475925
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  9475979 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 9475925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12979746 - 12979692
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12979746 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12979692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16386842 - 16386896
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  16386842 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 16386896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16400969 - 16401023
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  16400969 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 16401023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23876932 - 23876986
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  23876932 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 23876986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23885788 - 23885842
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  23885788 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 23885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8911413 - 8911461
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagtt 47  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  8911413 gacatggtcctttgcctacgtacccgtgagggatcaaaacctcgtagtt 8911461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 46460909 - 46460957
Alignment:
Q  7 gtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  46460909 gtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 46460957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 8955192 - 8955140
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtt-ttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||||| ||||||| | ||||||||||||||    
T  8955192 aagtggcaaataagaatttgtttgtgtttttttaatttaaaagaaaatggact 8955140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 14777840 - 14777927
Alignment:
Q  122 gccaaagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaaacatttga 209  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  14777840 gccaaagtagcaaatgagtatttgtttgtgttttttaatattaaagaaaatggactcatgataaagattaaattgattaaacatttga 14777927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 22330787 - 22330734
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||| |||||    
T  22330787 aagtggcaaatgagtatttgtttgtattttttaatttaaaagaaaatgaactca 22330734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 14777725 - 14777765
Alignment:
Q  7 gtcctttgcctacgtatgtgagggatcaaaaccttgtagtt 47  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  14777725 gtcctttgcctacgtacgtgagggatcaaaaccttgtagtt 14777765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 25493352 - 25493388
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  25493352 aagtggcaaatgagtatttgtttgtgttttttaatat 25493388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 25505425 - 25505461
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  25505425 aagtggcaaatgagtatttgtttgtgttttttaatat 25505461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 28701799 - 28701835
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  28701799 aagtggcaaatgagtatttgtttgtgttttttaatat 28701835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18091050 - 18090996
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    |||| |||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  18091050 gacaaggtcctttgcctacgtacctgtgagggatcaaaacctcgtagttcggggt 18090996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 1551265 - 1551229
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||| ||||    
T  1551265 aagtggcaaatgagtatttgtttgtgttttttgatat 1551229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 10983957 - 10983993
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10983957 aagtggcaaatgagtatttgtttgtgatttttaatat 10983993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 19170812 - 19170780
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    |||||||||||||||||||||||||||||||||    
T  19170812 aagtggcaaatgagtatttgtttgtgtttttta 19170780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 614230 - 614284
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  614230 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 614284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 622150 - 622204
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  622150 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 622204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14073343 - 14073397
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  14073343 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 14073397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16815254 - 16815308
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  16815254 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 16815308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16824009 - 16824063
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  16824009 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 16824063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20458241 - 20458295
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  20458241 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 20458295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21748427 - 21748481
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    |||| |||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  21748427 gacaaggtcatttgcctacgtacatgtgagggatcaaaacctcgtagttcggggt 21748481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22763645 - 22763699
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  22763645 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 22763699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24141807 - 24141861
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  24141807 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 24141861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30435551 - 30435605
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  30435551 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 30435605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26980689 - 26980742
Alignment:
Q  2 acatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  26980689 acatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 26980742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 27073079 - 27073132
Alignment:
Q  2 acatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  27073079 acatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 27073132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 27073200 - 27073250
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggac 176  Q
    ||||||||||| || |||||||||||||||||||| | ||| |||||||||    
T  27073200 aagtggcaaataagaatttgtttgtgttttttaatttaaaacaaaatggac 27073250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4466380 - 4466328
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggg 51  Q
    |||| |||| |||||||||||||  ||||||||||||||||| ||||||||||    
T  4466380 gacaaggtcatttgcctacgtatccgtgagggatcaaaacctcgtagttcggg 4466328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 18910356 - 18910308
Alignment:
Q  7 gtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  18910356 gtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 18910308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20451421 - 20451473
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggg 51  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||    
T  20451421 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggg 20451473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 2408504 - 2408472
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    |||||||||||||| ||||||||||||||||||    
T  2408504 aagtggcaaatgagaatttgtttgtgtttttta 2408472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 2408902 - 2408934
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    |||||||||||||| ||||||||||||||||||    
T  2408902 aagtggcaaatgagaatttgtttgtgtttttta 2408934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12393507 - 12393456
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcgg 50  Q
    |||| |||||||||||||||||   ||||||||||||||||| |||||||||    
T  12393507 gacaaggtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcgg 12393456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 19714819 - 19714783
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  19714819 aagtggcaaataagtgtttgtttgtgttttttaatat 19714783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 19721012 - 19720976
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  19721012 aagtggcaaataagtgtttgtttgtgttttttaatat 19720976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 18692720 - 18692646
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaa 201  Q
    ||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  18692720 aagtggcaaataagagtttgtttgtgttttttaatattaaagaaaatggactcatgataaa-attaaattgattaa 18692646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 18708090 - 18708016
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaa 201  Q
    ||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  18708090 aagtggcaaataagagtttgtttgtgttttttaatattaaagaaaatggactcatgataaa-attaaattgattaa 18708016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 49965540 - 49965614
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactcatgaaaaagattaaattgattaa 201  Q
    ||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  49965540 aagtggcaaataagagtttgtttgtgttttttaatattaaagaaaatggactcatgataaa-attaaattgattaa 49965614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 3412406 - 3412370
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  3412406 aagtggcaaatgagtatttgtttgtgttttttaatat 3412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 9524252 - 9524288
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  9524252 aagtggcaaatgagtatttgtttgtgttttttaatat 9524288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 9553967 - 9554003
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  9553967 aagtggcaaatgagtatttgtttgtgttttttaatat 9554003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 11182591 - 11182555
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  11182591 aagtggcaaatgagtatttgtttgtgttttttaatat 11182555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 13104549 - 13104585
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  13104549 aagtggcaaatgagtatttgtttgtgttttttaatat 13104585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 13110705 - 13110741
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  13110705 aagtggcaaatgagtatttgtttgtgttttttaatat 13110741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 14880165 - 14880201
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  14880165 aagtggcaaatgagtatttgtttgtgttttttaatat 14880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 16030247 - 16030283
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  16030247 aagtggcaaatgagtatttgtttgtgttttttaatat 16030283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 12558995 - 12558959
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12558995 aagtggcaaattagtatttgtttgtgttttttaatat 12558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 14892022 - 14892058
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14892022 aagtggcaaatgagtatttgtttgtgctttttaatat 14892058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 43099376 - 43099340
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||| ||||||||||||||||||    
T  43099376 aagtggcaaatgagtattcgtttgtgttttttaatat 43099340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 69435 - 69381
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  69435 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 69381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 75528 - 75474
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  75528 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 75474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2253507 - 2253561
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  2253507 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 2253561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3412528 - 3412474
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  3412528 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 3412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5649973 - 5650027
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  5649973 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 5650027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8607451 - 8607397
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  8607451 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 8607397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11628227 - 11628281
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  11628227 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 11628281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12478080 - 12478134
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12478080 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12478134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13104427 - 13104481
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  13104427 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 13104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14322630 - 14322576
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||    
T  14322630 gacatggtcctctgcctacgtatccgtgaaggatcaaaacctcgtagttcggggt 14322576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15527343 - 15527397
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  15527343 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 15527397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15536032 - 15536086
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  15536032 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 15536086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15629068 - 15629014
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  15629068 gacatggtcctctgcctacgtacccgtgaaggatcaaaaccttgtagttcggggt 15629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21637364 - 21637418
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  21637364 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 21637418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23286924 - 23286978
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  23286924 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 23286978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30013223 - 30013169
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    |||| |||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  30013223 gacaaggtcctctgcctacgtacctgtgagggatcaaaacctcgtagttcggggt 30013169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37254459 - 37254513
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  37254459 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 37254513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37264299 - 37264353
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  37264299 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 37264353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 69313 - 69281
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    ||||||||||||||||||||||||| |||||||    
T  69313 aagtggcaaatgagtatttgtttgtatttttta 69281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 75406 - 75374
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    ||||||||||||||||||||||||| |||||||    
T  75406 aagtggcaaatgagtatttgtttgtatttttta 75374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6195660 - 6195609
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcgg 50  Q
    ||||||||||| ||||||||||   ||||||||||||||||| |||||||||    
T  6195660 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcgg 6195609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6203244 - 6203193
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcgg 50  Q
    ||||||||||| ||||||||||   ||||||||||||||||| |||||||||    
T  6203244 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcgg 6203193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49965418 - 49965469
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcgg 50  Q
    ||||||||||| |||||| |||   |||||||||||||||||||||||||||    
T  49965418 gacatggtcctctgcctatgtacccgtgagggatcaaaaccttgtagttcgg 49965469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 18956962 - 18956906
Alignment:
Q  123 ccaaagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  18956962 ccaaagtggcaaatgagtatttgtttgtgttttttactattaaagaaaatgaactca 18956906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 33312858 - 33312914
Alignment:
Q  123 ccaaagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  33312858 ccaaagtggcaaatgagtatttgtttgtgttttttaatatcaaaggtaatggactca 33312914  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 10058952 - 10058916
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  10058952 aagtggcaaatgagtatttgtttgtgttttttaatat 10058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 15955926 - 15955962
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  15955926 aagtggcaaatgagtatttgtttgtgttttttaatat 15955962  T

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Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 20091710 - 20091746
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  20091710 aagtggcaaatgagtatttgtttgtgttttttaatat 20091746  T

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Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 20098574 - 20098610
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  20098574 aagtggcaaatgagtatttgtttgtgttttttaatat 20098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 36449406 - 36449370
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  36449406 aagtggcaaatgagtatttgtttgtgttttttaatat 36449370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 36455794 - 36455758
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  36455794 aagtggcaaatgagtatttgtttgtgttttttaatat 36455758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 37049528 - 37049492
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  37049528 aagtggcaaatgagtatttgtttgtgttttttaatat 37049492  T

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Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 21826432 - 21826483
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || |||||||||||||||||||| | ||||||||||||||    
T  21826432 aagtggcaaataagaatttgtttgtgttttttaatttaaaagaaaatggact 21826483  T

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Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23689769 - 23689823
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  23689769 gacatggtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 23689823  T

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Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 33304298 - 33304259
Alignment:
Q  140 tatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  33304298 tatttgtttgtgttttttaatattaaagaaaatggactca 33304259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 25041176 - 25041209
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaa 159  Q
    ||||||||||||||||||||||||||||||||||    
T  25041176 aagtggcaaatgagtatttgtttgtgttttttaa 25041209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 23348973 - 23349009
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||| ||||||||||||||||||||||    
T  23348973 aagtggcaaatgagaatttgtttgtgttttttaatat 23349009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 38226877 - 38226913
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||||||||||||||||| |||||||||||    
T  38226877 aagtggcaaatgagtatttgtttgtattttttaatat 38226913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1799429 - 1799375
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  1799429 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 1799375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5433903 - 5433957
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  5433903 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 5433957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5447719 - 5447773
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  5447719 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 5447773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11938017 - 11938071
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  11938017 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 11938071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11951941 - 11951995
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  11951941 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 11951995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12385725 - 12385779
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12385725 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12394418 - 12394472
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12394418 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12394472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17949743 - 17949689
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  17949743 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 17949689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17963632 - 17963578
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  17963632 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 17963578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20638636 - 20638690
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  20638636 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 20638690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21727314 - 21727368
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||  ||||| |||||||||||| ||||||||||||    
T  21727314 gacatggtcctctgcctacgtacctgtgaaggatcaaaacctcgtagttcggggt 21727368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23377088 - 23377142
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  23377088 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 23377142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25448729 - 25448783
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  25448729 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 25448783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 157
Target Start/End: Complemental strand, 25527351 - 25527320
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttt 157  Q
    ||||||||||||||||||||||||||||||||    
T  25527351 aagtggcaaatgagtatttgtttgtgtttttt 25527320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 157
Target Start/End: Complemental strand, 25534035 - 25534004
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttt 157  Q
    ||||||||||||||||||||||||||||||||    
T  25534035 aagtggcaaatgagtatttgtttgtgtttttt 25534004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26546704 - 26546758
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  26546704 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 26546758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 26870198 - 26870147
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  26870198 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 26870147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29894391 - 29894337
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  29894391 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 29894337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30250495 - 30250441
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   || |||||||||||||| ||||||||||||    
T  30250495 gacatggtcctttgcctacgtacccgtaagggatcaaaacctcgtagttcggggt 30250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31512944 - 31512890
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  31512944 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 31512890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31527069 - 31527015
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  31527069 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 31527015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36449528 - 36449474
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  36449528 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 36449474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36455916 - 36455862
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  36455916 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 36455862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25534157 - 25534105
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggg 51  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||    
T  25534157 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggg 25534105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 29894268 - 29894236
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    ||||||||||||||||||||||||| |||||||    
T  29894268 aagtggcaaatgagtatttgtttgtatttttta 29894236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 29902990 - 29902958
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    ||||||||||||||||||||||||| |||||||    
T  29902990 aagtggcaaatgagtatttgtttgtatttttta 29902958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 36434 - 36488
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaag-aaaatggactca 179  Q
    ||||||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  36434 aagtggcaaatgagtatttgtttgtgttttttaatttaaaagaaaaatggactca 36488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21821 - 21767
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  21821 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 21767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36311 - 36365
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  36311 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 36365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 23640697 - 23640754
Alignment:
Q  142 tttgtttgtgttttttaata-tgaaagaaaatggactcatgaaaaagattaaattgatt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  23640697 tttgtttgtgttttttaatattgaaagaaaatggactcatgataaa-attaaattgatt 23640754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 25851979 - 25852015
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  25851979 aagtggcaaatgagtatttgtttgtgttttttaatat 25852015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 32024546 - 32024601
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtg--ttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||||||||||||||||||  ||||||||| | ||||||||||||||||    
T  32024546 aagtggcaaatgagtatttgtttgtgttttttttaatttaaaagaaaatggactca 32024601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 22155895 - 22155930
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaata 161  Q
    ||||||||||||||||||||||||||||||||||||    
T  22155895 aagtggcaaatgagtatttgtttgtgttttttaata 22155930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 22161903 - 22161938
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaata 161  Q
    ||||||||||||||||||||||||||||||||||||    
T  22161903 aagtggcaaatgagtatttgtttgtgttttttaata 22161938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 25858175 - 25858211
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25858175 aagtggcaaatgagtatttgtttgcgttttttaatat 25858211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14890174 - 14890228
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  14890174 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 14890228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15708842 - 15708788
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  15708842 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 15708788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21473581 - 21473635
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  21473581 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 21473635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32001041 - 32000987
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  32001041 gacatggtcctctgcctacgtactcgtgagggatcaaaacctcgtagttcggggt 32000987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32007998 - 32007944
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  32007998 gacatggtcctctgcctacgtactcgtgagggatcaaaacctcgtagttcggggt 32007944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 6032320 - 6032267
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| ||||||    
T  6032320 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactca 6032267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 16738430 - 16738377
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    |||||||||||||| || |||||||||||||||||||  |||||| | ||||||    
T  16738430 aagtggcaaatgagaatgtgtttgtgttttttaatattgaagaaagtagactca 16738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 25706694 - 25706646
Alignment:
Q  7 gtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  25706694 gtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 25706646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 25851863 - 25851911
Alignment:
Q  7 gtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||| |||||||||||  ||||||||||||||||| ||||||||||||    
T  25851863 gtcctctgcctacgtatccgtgagggatcaaaacctcgtagttcggggt 25851911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27806706 - 27806758
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggg 51  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||    
T  27806706 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggg 27806758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32024423 - 32024475
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggg 51  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||    
T  32024423 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggg 32024475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 20727021 - 20726969
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactc 178  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| |||||    
T  20727021 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactc 20726969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 20734933 - 20734881
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactc 178  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| |||||    
T  20734933 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactc 20734881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 20739919 - 20739867
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactc 178  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| |||||    
T  20739919 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactc 20739867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 20743491 - 20743439
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactc 178  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| |||||    
T  20743491 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactc 20743439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 24653413 - 24653464
Alignment:
Q  4 atggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  24653413 atggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 24653464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 14437615 - 14437562
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||| |||||    
T  14437615 aagtggcaaatgagtatttgtttgtattttttaatttaaaagaaaatgaactca 14437562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 17837 - 17801
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  17837 aagtggcaaatgagtatttgtttgtgttttttaatat 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 22173952 - 22173988
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  22173952 aagtggcaaatgagtatttgtttgtgttttttaatat 22173988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 38854505 - 38854469
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  38854505 aagtggcaaatgagtatttgtttgtgttttttaatat 38854469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 9185573 - 9185522
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || |||||||||||||||||||| | ||||||||||||||    
T  9185573 aagtggcaaataagaatttgtttgtgttttttaatttaaaagaaaatggact 9185522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 9191438 - 9191387
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || |||||||||||||||||||| | ||||||||||||||    
T  9191438 aagtggcaaataagaatttgtttgtgttttttaatttaaaagaaaatggact 9191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 3381356 - 3381392
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3381356 aagtggcaaataagtatttgtttgtgttttttaatat 3381392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 3388098 - 3388134
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3388098 aagtggcaaataagtatttgtttgtgttttttaatat 3388134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 50188853 - 50188817
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||||||||||||||||||||||| |||||    
T  50188853 aagtggcaaatgagtatttgtttgtgtttttaaatat 50188817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3441332 - 3441278
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  3441332 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 3441278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7114226 - 7114280
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   |||| |||||||||||| ||||||||||||    
T  7114226 gacatggtcctttgcctacgtactcgtgatggatcaaaacctcgtagttcggggt 7114280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7945963 - 7945909
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  7945963 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 7945909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 9186020 - 9185969
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||||| |||||| | ||||||||||||||    
T  9186020 aagtggcaaataagaatttgtttgtgttctttaatttaaaagaaaatggact 9185969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14882821 - 14882767
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  14882821 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 14882767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14926831 - 14926777
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  14926831 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 14926777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20840994 - 20841048
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  20840994 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 20841048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25986438 - 25986384
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   |||| |||||||||||| ||||||||||||    
T  25986438 gacatggtcctttgcctacgtacccgtgaaggatcaaaacctcgtagttcggggt 25986384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39743704 - 39743758
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  39743704 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 39743758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14437736 - 14437684
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggg 51  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||    
T  14437736 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggg 14437684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 15566237 - 15566290
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| ||||||    
T  15566237 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactca 15566290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 15578884 - 15578937
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| ||||||    
T  15578884 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactca 15578937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 19736907 - 19736943
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  19736907 aagtggcaaataagtgtttgtttgtgttttttaatat 19736943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 39743827 - 39743863
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  39743827 aagtggcaaataagtgtttgtttgtgttttttaatat 39743863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 47877520 - 47877488
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    |||||||||||||| ||||||||||||||||||    
T  47877520 aagtggcaaatgagaatttgtttgtgtttttta 47877488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 392 - 356
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  392 aagtggcaaatgagtatttgtttgtgttttttaatat 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 16799 - 16763
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  16799 aagtggcaaatgagtatttgtttgtgttttttaatat 16763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 26030 - 26066
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  26030 aagtggcaaatgagtatttgtttgtgttttttaatat 26066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 291 - 327
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  291 aagtggcaaatgagtatttgtttgtgttttttaatat 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 169 - 223
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  169 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17664 - 17716
Alignment:
Q  127 agtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||| |||||    
T  17664 agtggcaaatgagtatttgtttgtattttttaatttaaaagaaaatgaactca 17716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 24890 - 24854
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  24890 aagtggcaaatgagtatttgtttgtgttttttaatat 24854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 57535 - 57499
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  57535 aagtggcaaatgagtatttgtttgtgttttttaatat 57499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 42964 - 43000
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  42964 aagtggcaaatgagtatttgtttgtgttttttaatat 43000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 69065 - 69029
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  69065 aagtggcaaatgagtatttgtttgtgttttttaatat 69029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 5870057 - 5870093
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  5870057 aagtggcaaatgagtatttgtttgtgttttttaatat 5870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 5873168 - 5873204
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  5873168 aagtggcaaatgagtatttgtttgtgttttttaatat 5873204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 29586310 - 29586274
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  29586310 aagtggcaaatgagtatttgtttgtgttttttaatat 29586274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 36736448 - 36736412
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  36736448 aagtggcaaatgagtatttgtttgtgttttttaatat 36736412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 17174 - 17207
Alignment:
Q  129 tggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||||||||||||||||||||||||||    
T  17174 tggcaaatgagtatttgtttgtgttttttaatat 17207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 18501363 - 18501310
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactca 179  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||    
T  18501363 aagtggcaaatgagaattggtttgtattttttaatttaaaagaaaatggactca 18501310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12376308 - 12376254
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12376308 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12376254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12390135 - 12390081
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12390135 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12390081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21066500 - 21066446
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  21066500 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 21066446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21070252 - 21070198
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   |||| |||||||||||| ||||||||||||    
T  21070252 gacatggtcctttgcctacgtacccgtgaaggatcaaaacctcgtagttcggggt 21070198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29586432 - 29586378
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  29586432 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 29586378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36736570 - 36736516
Alignment:
Q  1 gacatggtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||| |||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  36736570 gacatgatcctctgcctacgtacctgtgagggatcaaaacctcgtagttcggggt 36736516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 24700237 - 24700189
Alignment:
Q  7 gtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||||||||||||||  || |||||||||||||| ||||||||||||    
T  24700237 gtcctttgcctacgtatccgtaagggatcaaaacctcgtagttcggggt 24700189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 378143 - 378091
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactc 178  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| |||||    
T  378143 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactc 378091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 38083421 - 38083457
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  38083421 aagtggcaaataagtgtttgtttgtgttttttaatat 38083457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 9009563 - 9009527
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  9009563 aagtggcaaatgagtatttgtttgtgttttttaatat 9009527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 15472788 - 15472824
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  15472788 aagtggcaaatgagtatttgtttgtgttttttaatat 15472824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 44831473 - 44831509
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  44831473 aagtggcaaatgagtatttgtttgtgttttttaatat 44831509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28426637 - 28426583
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  28426637 gacatggtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 28426583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 2415652 - 2415688
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||| ||||||||||||||||||||||    
T  2415652 aagtggcaaatgagaatttgtttgtgttttttaatat 2415688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 18099457 - 18099421
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||| ||||||||||||||||||||||||||    
T  18099457 aagtggcaaacgagtatttgtttgtgttttttaatat 18099421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2334149 - 2334203
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  2334149 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 2334203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5622519 - 5622573
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  5622519 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 5622573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5636658 - 5636712
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  5636658 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 5636712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9009685 - 9009631
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  9009685 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 9009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 14803694 - 14803745
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  14803694 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 14803745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 14819172 - 14819223
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||| |||||||| | ||||||||||||||    
T  14819172 aagtggcaaataagaatttgtttgtggtttttaatttaaaagaaaatggact 14819223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22114702 - 22114756
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  22114702 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 22114756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35077026 - 35076972
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  35077026 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 35076972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 52101114 - 52101063
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || || ||||||||||||||||| | ||||||||||||||    
T  52101114 aagtggcaaataagaatatgtttgtgttttttaatttaaaagaaaatggact 52101063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 47109647 - 47109599
Alignment:
Q  7 gtcctttgcctacgta--tgtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  47109647 gtcctctgcctacgtacatgtgagggatcaaaacctcgtagttcggggt 47109599  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 2415533 - 2415584
Alignment:
Q  4 atggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||||||||||||| ||   || |||||||||||||||||||||||||||    
T  2415533 atggtcctttgcctacatacccgtaagggatcaaaaccttgtagttcggggt 2415584  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 26198478 - 26198529
Alignment:
Q  4 atggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    |||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  26198478 atggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 26198529  T

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Target: scaffold0320 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5150 - 5204
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  5150 gacatggtcctctgcctacgtacccgtgagggatcaaaaccttgtagttcggggt 5204  T

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Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 299 - 245
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  299 gacatggtcctctgcctacgtacccgtgagggatcaaaaccttgtagttcggggt 245  T

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Target: scaffold0167; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 176 - 140
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||||||||| |||||||||||||||||||||||||    
T  176 aagtggcaaataagtatttgtttgtgttttttaatat 140  T

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Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 25185 - 25134
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || |||||||||||||||||||| | ||||||||||||||    
T  25185 aagtggcaaataagaatttgtttgtgttttttaatttaaaagaaaatggact 25134  T

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Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15116 - 15062
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  15116 gacatggtcctctgcctacgtacccgtgagggatcaaaaccttgtagttcggggt 15062  T

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Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54794 - 54740
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  54794 gacatggtcctttgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 54740  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 1307 - 1343
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    |||||||||||||||||||||||||||||||| ||||    
T  1307 aagtggcaaatgagtatttgtttgtgttttttgatat 1343  T

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Target: scaffold0067 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 42819 - 42851
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtttttta 158  Q
    |||||||||||||||||||||||||||||||||    
T  42819 aagtggcaaatgagtatttgtttgtgtttttta 42851  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 104899 - 104935
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatat 162  Q
    ||||| |||||||||||||||||||||||||||||||    
T  104899 aagtgccaaatgagtatttgtttgtgttttttaatat 104935  T

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Target: scaffold1855 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1855
Description:

Target: scaffold1855; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1286 - 1232
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  1286 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 1232  T

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Target: scaffold0755 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2594 - 2540
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  2594 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 2540  T

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Target: scaffold0573 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1679 - 1625
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  1679 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 1625  T

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Target: scaffold0478 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1310 - 1364
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  1310 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 1364  T

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Target: scaffold0420 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12877 - 12823
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  12877 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 12823  T

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Target: scaffold0362 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2878 - 2932
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  2878 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 2932  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 21883 - 21934
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || |||||||||| ||||||||| | ||||||||||||||    
T  21883 aagtggcaaataagaatttgtttgtattttttaatttaaaagaaaatggact 21934  T

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Target: scaffold0084 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35057 - 35111
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  35057 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 35111  T

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Target: scaffold0077 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1582 - 1528
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  1582 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 1528  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 88657 - 88711
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  88657 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 88711  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15377 - 15323
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  15377 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 15323  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 201059 - 201113
Alignment:
Q  1 gacatggtcctttgcctacgtat--gtgagggatcaaaaccttgtagttcggggt 53  Q
    ||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  201059 gacatggtcctctgcctacgtacccgtgagggatcaaaacctcgtagttcggggt 201113  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 64369 - 64418
Alignment:
Q  128 gtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggact 177  Q
    ||||||||| || || ||||||||||||||||| | ||||||||||||||    
T  64369 gtggcaaataagaatctgtttgtgttttttaatttaaaagaaaatggact 64418  T

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Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 80767 - 80816
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatgga 175  Q
    ||||||||||| || |||||||||||| ||||||| | ||||||||||||    
T  80767 aagtggcaaataagaatttgtttgtgtgttttaatttaaaagaaaatgga 80816  T

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Target: scaffold0473 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 7379 - 7431
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgtt-ttttaatatgaaagaaaatggact 177  Q
    ||||||||||| || ||||||||||||| ||||||| | ||||||||||||||    
T  7379 aagtggcaaataagaatttgtttgtgttattttaatttaaaagaaaatggact 7431  T

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Target: scaffold0327 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 2059 - 2007
Alignment:
Q  126 aagtggcaaatgagtatttgtttgtgttttttaatatgaaagaaaatggactc 178  Q
    ||||||||||| || |||||||||||||||||||| | || |||||| |||||    
T  2059 aagtggcaaataagaatttgtttgtgttttttaatttaaatgaaaatagactc 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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