View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8620_low_3 (Length: 252)
Name: NF8620_low_3
Description: NF8620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8620_low_3 |
 | |
|
| [»] scaffold0433 (1 HSPs) |
| | |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
| [»] scaffold1376 (1 HSPs) |
| | |
|
| [»] scaffold0354 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0433 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0433
Description:
Target: scaffold0433; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 15055 - 14812
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15055 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcctacagatttacacttgattcgcctttttctctgttcttgcga |
14956 |
T |
|
| Q |
101 |
aaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctggc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
14955 |
aaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcagggaaacttgaatttaatcttgttccgttgattctggc |
14856 |
T |
|
| Q |
201 |
ttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14855 |
ttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
14812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 20195039 - 20195283
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcga |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||| || |
|
|
| T |
20195039 |
ttgaatgaagttttttttttgttctttgtgctttttcggttacacgcttctataatcctacagatttacacttgattcgccttttgctttgttcttgaga |
20195138 |
T |
|
| Q |
101 |
aaaagaa-gatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctgg |
199 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
20195139 |
aaaaaaaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgagtttaatcttgttctgttgattctgg |
20195238 |
T |
|
| Q |
200 |
cttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20195239 |
cttgatttcttgctgttccgatcctctcttcttcttcacaggttc |
20195283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 5340247 - 5340487
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
5340247 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
5340344 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
5340345 |
aaaaa-aag--gaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattctg |
5340441 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
5340442 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
5340487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 34610806 - 34610566
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
34610806 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
34610709 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
34610708 |
aaaaa-aag--gaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattctg |
34610612 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
34610611 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
34610566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 34625923 - 34625683
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
34625923 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
34625826 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
34625825 |
aaaaa-aag--gaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattctg |
34625729 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
34625728 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
34625683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 25505704 - 25505885
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttc |
161 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| ||||||| |||||||||||||||||| |||||||||||| | |||| || |||||| |
|
|
| T |
25505704 |
agatctacacttgattcgtctttgttgatgttcttg-gaaaaaaaagatgaggtttgagttttacctgtgattttcttggtgaattcgaaacgaatcttc |
25505802 |
T |
|
| Q |
162 |
aggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||||||||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25505803 |
aggaaaacttgagttgaatcttgttctgttgattctggcttgagttcttgctgttccgatcctctcttcttcttcacaggttc |
25505885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 25638945 - 25639185
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
25638945 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
25639042 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||| ||||| |
|
|
| T |
25639043 |
aaaaa-aag--gaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttggttctg |
25639139 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
25639140 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
25639185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 18366288 - 18366532
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| || ||||| |||| |||| |||| ||||||||| |||| || || || || ||| |
|
|
| T |
18366288 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgtttctagaatcctacatgtttatacttgattctccttcttatccattttttgcg |
18366385 |
T |
|
| Q |
100 |
aaaaagaagatg-aagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattct |
197 |
Q |
| |
|
||||| || | | |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
18366386 |
aaaaaaaaaaaggaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattct |
18366485 |
T |
|
| Q |
198 |
ggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
18366486 |
ggtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
18366532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 18381327 - 18381571
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| || ||||| |||| |||| |||| ||||||||| |||| || || || || ||| |
|
|
| T |
18381327 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgtttctagaatcctacatgtttatacttgattctccttcttatccattttttgcg |
18381424 |
T |
|
| Q |
100 |
aaaaagaagatg-aagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattct |
197 |
Q |
| |
|
||||| || | | |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
18381425 |
aaaaaaaaaaaggaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattct |
18381524 |
T |
|
| Q |
198 |
ggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
18381525 |
ggtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
18381571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 20581483 - 20581593
Alignment:
| Q |
134 |
tttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccgatcctctcttcttc |
233 |
Q |
| |
|
|||||||| |||| ||||||| ||||||||||||||||||||| | |||||||| ||||||| ||||||| ||||||||||| ||||| | |||||||| |
|
|
| T |
20581483 |
tttcttggcgatttcgaaccgaatcttcaggaaaacttgaattgattcttgttctgttgattttggcttgagttcttgctgtttcgatcttttcttcttc |
20581582 |
T |
|
| Q |
234 |
ttcacaggttc |
244 |
Q |
| |
|
|||||||||| |
|
|
| T |
20581583 |
ctcacaggttc |
20581593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 572295 - 572372
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
||||||| |||||||||||||||||| | ||||||||||||| | |||||||| ||||||||||||||||| ||||| |
|
|
| T |
572295 |
tacagatctacacttgattcgcctttgttgatgttcttgcgaaaga-aagatgaattttgagttttacctgtgattttc |
572372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 35872932 - 35873009
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
||||||| |||||||||||||||||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
35872932 |
tacagatctacacttgattcgcctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
35873009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 34494971 - 34495045
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| |||||||||||||||||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
34494971 |
agatctacacttgattcgcctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
34495045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 22273932 - 22274006
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
22273932 |
agatctacacttgattcgtctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
22274006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 5244927 - 5244683
Alignment:
| Q |
1 |
ttgaatgaagtttttctttt-gttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcg |
99 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5244927 |
ttgaatgaagttttttttttagttctttgtgctttttcggttacacgcttctataatcctacagatttacacttgattcgcctttttctctgttcttgcg |
5244828 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctgg |
199 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||| |||| ||||||||||| |
|
|
| T |
5244827 |
aaaaaaaagatgaagtttgagttttacctgtgattttcttggtgatttcgaaccggatcttcaggaaaacttgagtttgatctcgttctgttgattctgg |
5244728 |
T |
|
| Q |
200 |
cttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5244727 |
cttgatttcttgctgttccgatcctctcttcttctttacaggttc |
5244683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 26751150 - 26751393
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttc-tctgttcttgcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||||| ||||| || |||| |||||||||||||||||||| ||||||| ||| |||||||| |
|
|
| T |
26751150 |
ttgaatgaagtttttcttt-gttctttgtgcttttttggttacgtgcttttagaatcctacagatttacacttgattctccttttttatctattcttgcg |
26751248 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26751249 |
aaaaa-aaggtgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaaggaaaacttgattttaatcttgttccgttgattctg |
26751347 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26751348 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
26751393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 11415805 - 11416050
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttc-tctgttcttgcg |
99 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
11415805 |
ttgaatgaagtttctcttt-gttctttgtgcttttttggttacgtgcttctagaatcctacagatttacacttgattctccttttttatctgttcttgcg |
11415903 |
T |
|
| Q |
100 |
aaaaagaa-gatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattct |
197 |
Q |
| |
|
||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
11415904 |
aaaaaaaaaggtgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaaggaaagcttgattttaatcttgttccgttgattct |
11416003 |
T |
|
| Q |
198 |
ggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11416004 |
ggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
11416050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 11430809 - 11431053
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttc-tctgttcttgcg |
99 |
Q |
| |
|
||||||||||||| ||||| |||||||||| ||||| |||||| |||||||| |||| |||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
11430809 |
ttgaatgaagtttctcttt-gttctttgtgattttttggttacgtgcttctagaatcctacagatttacacttgattctccttttttatctgttcttgcg |
11430907 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11430908 |
gaaaaaaaggtgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaaggaaagcttgattttaatcttgttccgttgattctg |
11431007 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11431008 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
11431053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 18460921 - 18461102
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttc |
161 |
Q |
| |
|
|||| ||||||||||||| |||| | ||||||| |||||| ||||||| |||||||||||||||||| |||||||||||||| || | || |||||| |
|
|
| T |
18460921 |
agatctacacttgattcgtctttgttgacgttcttg-gaaaaaaaagatgaggtttgagttttacctgtgattttcttggtgatttcgtaacgaatcttc |
18461019 |
T |
|
| Q |
162 |
aggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18461020 |
aggaaaacttgagttgaatcttgttatgttgattctggcttgagttcttgctgttccgatcctctcttcttcttcacaggttc |
18461102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 23005946 - 23006054
Alignment:
| Q |
29 |
tgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttct-ctgttcttgcgaaaaagaagatgaagtttgagttttacc |
127 |
Q |
| |
|
|||||||||||||| | |||||| ||| ||| ||| |||||||||||||||||||||| |||||||| |||| | |||||||||||||||||||||| |
|
|
| T |
23005946 |
tgctttttcggttagaaacttctaaaattctacggatctacacttgattcgcctttttctgatgttcttgagaaaga-aagatgaagtttgagttttacc |
23006044 |
T |
|
| Q |
128 |
tgtggttttc |
137 |
Q |
| |
|
|||| ||||| |
|
|
| T |
23006045 |
tgtgattttc |
23006054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 4053987 - 4053912
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
4053987 |
agatctacacttgattcgtctttgttgatgttcttgagaaaagaaagatgaagtttgagttttacctgtgattttc |
4053912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 15478194 - 15478120
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
15478194 |
agatctacacttgattcgtctttgttgatgttcttgagaaaaa-aagatgaagtttgagttttacctgtgattttc |
15478120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 15852953 - 15852879
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
15852953 |
agatctacacttgattcgtctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
15852879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 4946973 - 4946896
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
||||||| | |||||||||||||||| | |||||||| | || | |||||||||||||||||||||||||| ||||| |
|
|
| T |
4946973 |
tacagatctgcacttgattcgcctttgttgatgttcttgagcaaga-aagatgaagtttgagttttacctgtgattttc |
4946896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 24043953 - 24043729
Alignment:
| Q |
21 |
gttctttgtgcttttt-cggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttga |
119 |
Q |
| |
|
|||||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
24043953 |
gttctttgtgcttttttcggttaaaaacttctataatcctacagatttacacttgattcgcctttttctttgttcttgagaaaaaaaagatgaagtttga |
24043854 |
T |
|
| Q |
120 |
gttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccg |
219 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
24043853 |
gttttacttgtggttttcttggtgattccgaaccggatcttcaggaaaacttgagtttaatcttgttctgttgattctggcttgatttcttgctgttccg |
24043754 |
T |
|
| Q |
220 |
atcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
24043753 |
atcctctcttcttcttcacaggttc |
24043729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 26267185 - 26267408
Alignment:
| Q |
21 |
gttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctc-tgttcttgcgaaaaagaagatgaagtttga |
119 |
Q |
| |
|
||||||| |||||||||||||| | |||||| |||| ||||||| |||||||||||||||||||| | |||||||| |||| | |||||||||||||| |
|
|
| T |
26267185 |
gttctttttgctttttcggttataaacttctaaaatcctacagatctacacttgattcgccttttttttatgttcttgagaaaga-aagatgaagtttga |
26267283 |
T |
|
| Q |
120 |
gttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccg |
219 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||| | ||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
26267284 |
gttttacctgtgattttcttggtgatttcgaaccgaatcttcaggaaaatttgaattaattctcgttctgttgattctggcttgagttcttgctgttccg |
26267383 |
T |
|
| Q |
220 |
atcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
||||||||||||| |||||||||| |
|
|
| T |
26267384 |
atcctctcttctttctcacaggttc |
26267408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 15714919 - 15714996
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggtttt |
136 |
Q |
| |
|
||||||| |||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
15714919 |
tacagatctacacttgattcgcctttgttgatgttcttgaaaaaaaaaagatgaagtttgagttttacctgtgatttt |
15714996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 40561746 - 40561521
Alignment:
| Q |
21 |
gttctttgtgcttttt-cggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgc-gaaaaagaagatgaagtttg |
118 |
Q |
| |
|
|||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| |
|
|
| T |
40561746 |
gttctttgtgcttttttcggttaaaagcttctataatcctacagatttacacttgattcgcctttttctttgttcttgaagaaaaaaaagatgaagtttg |
40561647 |
T |
|
| Q |
119 |
agttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttcc |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||| |
|
|
| T |
40561646 |
agttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgagtttaatcttgttctattgattttggcttgatttcttgctgttcc |
40561547 |
T |
|
| Q |
219 |
gatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
40561546 |
gatcctctcttcttcttcacaggttc |
40561521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 5315910 - 5315794
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggtttt-cttggtgattccgaaccggat |
157 |
Q |
| |
|
||||||| |||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||| |||| |||| |||| ||||| ||| |
|
|
| T |
5315910 |
tacagatctacacttgattcgcctttgttgatgttcttgaaaaaaaaaagatgaagtttgagttttacctgtgattttggttggagatttcgaacgagat |
5315811 |
T |
|
| Q |
158 |
cttcaggaaaacttgaat |
175 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
5315810 |
cttc-ggaaaacttgaat |
5315794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 22728918 - 22728992
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| |||||||||||| ||||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
22728918 |
agatctacacttgattcacctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
22728992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 1894548 - 1894465
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgatt |
146 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||| | |||||||||||||||||||||||| | ||| ||||| |||| |
|
|
| T |
1894548 |
agatctacacttgattcgtctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgagttttgcttggagatt |
1894465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 28261637 - 28261393
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttc-tctgttcttgcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
28261637 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacagatttacacttgattctccttttttatctgttcttgcg |
28261540 |
T |
|
| Q |
100 |
aaaaagaa-gatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattct |
197 |
Q |
| |
|
||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
28261539 |
aaaaaaaaaggtgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaaggaaagcttgattttaatcttgttccgttgattct |
28261440 |
T |
|
| Q |
198 |
ggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
28261439 |
ggtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
28261393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 5564898 - 5565138
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
5564898 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
5564995 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
5564996 |
aaaaa-aag--gaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattctg |
5565092 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
5565093 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
5565138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 19651774 - 19651957
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttc |
161 |
Q |
| |
|
|||| ||||||||||||| |||| | | |||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |
|
|
| T |
19651774 |
agatctacacttgattcgtctttgttgatattcttggaaaaaaaaagatgaagtttgagttttacctgtgattttcttggtgatttcgaaccgaatcttc |
19651873 |
T |
|
| Q |
162 |
-aggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|| |||||||| ||| | |||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
19651874 |
aagaaaaacttggattgattcttgttctgttgattctggcttgagttcttgctgttccgatcctcttttctttttcacaggttc |
19651957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 24462722 - 24462817
Alignment:
| Q |
90 |
tgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgtt |
186 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||| | ||||||| |
|
|
| T |
24462722 |
tgttcttggaaaaaaga-gatgaagtttgagttttacctgtgattttcttggtgatttcgaaccgaatcttcaggaaaacttggattgattcttgtt |
24462817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 12481463 - 12481570
Alignment:
| Q |
29 |
tgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacct |
128 |
Q |
| |
|
|||||||||||||| | |||||| ||| ||||||| |||||||||||||||||| | |||||||| |||| | ||||||||||||||||||||||| |
|
|
| T |
12481463 |
tgctttttcggttagaaacttctaaaattctacagatatacacttgattcgcctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacct |
12481561 |
T |
|
| Q |
129 |
gtggttttc |
137 |
Q |
| |
|
||| ||||| |
|
|
| T |
12481562 |
gtgattttc |
12481570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 4337577 - 4337820
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
4337577 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
4337674 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| || | ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
4337675 |
aaaaaaaaaaggaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattctg |
4337774 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
4337775 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
4337820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 4352717 - 4352961
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
4352717 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
4352814 |
T |
|
| Q |
100 |
aaaaagaagatg-aagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattct |
197 |
Q |
| |
|
||||| || | | |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
4352815 |
aaaaaaaaaaaggaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattct |
4352914 |
T |
|
| Q |
198 |
ggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
|| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
4352915 |
ggtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
4352961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 16420739 - 16420920
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttc |
161 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||| |
|
|
| T |
16420739 |
agatctacacttgattcgtctttgttgatgttcttg-gaaaaaaaagatgaggtttgagttttacctgtgattttcttggtgatttcgaaccgaatcttc |
16420837 |
T |
|
| Q |
162 |
aggaaaacttgaatttaatcttgttccgttgattctggcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16420838 |
aagaaaacttgagttgaatcttgttctgttgattctggcttgagttcttgctgttccgatcctctcttcttcttcacaggttc |
16420920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 28364359 - 28364599
Alignment:
| Q |
1 |
ttgaatgaagtttttcttttgttctttgtgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttctt-gcg |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| |||| |||| ||||||||| ||||||| || || || ||| |
|
|
| T |
28364359 |
ttgaatgaagtttttcttt-gttctttgtgcttttt-ggctacgtgcttctagaatcctacatgtttatacttgattctcctttttatccattttttgcg |
28364456 |
T |
|
| Q |
100 |
aaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttca-ggaaaacttgaatttaatcttgttccgttgattctg |
198 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
28364457 |
aaaaa-aag--gaagtttgagttttacctgtggttttcttggtggttccgatccggatcttcaaggaaagcttgattttagtcttgttccgttgattctg |
28364553 |
T |
|
| Q |
199 |
gcttggtttcttgctgttccgatcctctcttcttcttcacaggttc |
244 |
Q |
| |
|
| |||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
28364554 |
gtttggttccctgctgttctgatccgctcttcttcttcacaggttc |
28364599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 32965565 - 32965681
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggtttt-cttggtgattccgaaccggat |
157 |
Q |
| |
|
||||||| |||||||||||||||||| | ||||||| ||||| |||||||||||||||||||||||||| |||| |||| |||| ||||| ||| |
|
|
| T |
32965565 |
tacagatctacacttgattcgcctttgttgatgttcttaaaaaaaaaaagatgaagtttgagttttacctgtgattttggttggagatttcgaacgagat |
32965664 |
T |
|
| Q |
158 |
cttcaggaaaacttgaat |
175 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
32965665 |
cttc-ggaaaacttgaat |
32965681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 19446239 - 19446164
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
19446239 |
agatctacacttgattcgtctttgttgatgttcttgagaaaaaaaagatgaagtttgagttttacctgtgattttc |
19446164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 19448064 - 19447989
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
19448064 |
agatctacacttgattcgtctttgttgatgttcttgagaaaaaaaagatgaagtttgagttttacctgtgattttc |
19447989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 26827400 - 26827475
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26827400 |
agatctacacttgattcgtctttgttgatgttcttgagaaaaaaaagatgaagtttgagttttacctgtgattttc |
26827475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 36132660 - 36132699
Alignment:
| Q |
89 |
ctgttcttgcgaaaaagaagatgaagtttgagttttacctg |
129 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
36132660 |
ctgttcttgagaaaaa-aagatgaagtttgagttttacctg |
36132699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 20322841 - 20322986
Alignment:
| Q |
21 |
gttctttgtgcttttt-cggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttga |
119 |
Q |
| |
|
|||||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||| | |||||| ||||||||||||| |
|
|
| T |
20322841 |
gttctttgtgcttttttcggttaaaaacttctataatcctacagatttacacttgattcgcctttttctttgttctcgagaaaaa--agatgaagtttga |
20322938 |
T |
|
| Q |
120 |
gttttacctgtggttttcttggtgattccgaaccggatcttcaggaaa |
167 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
20322939 |
gttttacctgtggttttcttggtgatttcgaaccggatcttcaggaaa |
20322986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 13482581 - 13482655
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| |||||||||||||||||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
13482581 |
agatctacacttgattcgcctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
13482655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 21646640 - 21646714
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| |||||||||||| ||||| | |||||||| |||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
21646640 |
agatctacacttgattcacctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacctgtgattttc |
21646714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 47664269 - 47664338
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctg |
129 |
Q |
| |
|
||||||| |||||||||||||||||| | |||||||| |||| | |||||||| ||||||||||||||| |
|
|
| T |
47664269 |
tacagatctacacttgattcgcctttgttgatgttcttgagaaaga-aagatgaaatttgagttttacctg |
47664338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 33341 - 33453
Alignment:
| Q |
90 |
tgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccg |
189 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||| | |||||||| | |
|
|
| T |
33341 |
tgttcttggaaaaaaga-gatgaagtttgagttttacctgtgattttcttggtgatttcgaaccgaatcttcaggaaaacttggattgattcttgttctg |
33439 |
T |
|
| Q |
190 |
ttgattctggcttg |
203 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
33440 |
ttgattctggcttg |
33453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 165450 - 165338
Alignment:
| Q |
90 |
tgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttcttggtgattccgaaccggatcttcaggaaaacttgaatttaatcttgttccg |
189 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||| | |||||||| | |
|
|
| T |
165450 |
tgttcttggaaaaaaga-gatgaagtttgagttttacctgtgattttcttggtgatttcgaaccgaatcttcaggaaaacttggattgattcttgttctg |
165352 |
T |
|
| Q |
190 |
ttgattctggcttg |
203 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
165351 |
ttgattctggcttg |
165338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1376 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1376
Description:
Target: scaffold1376; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 870 - 763
Alignment:
| Q |
29 |
tgctttttcggttacatgcttctataatcttacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacct |
128 |
Q |
| |
|
|||||||||||||| | |||||| ||| ||||||| |||||||||||||||||| | |||||||| |||| | ||||||||||||||||||||||| |
|
|
| T |
870 |
tgctttttcggttagaaacttctaaaattctacagatatacacttgattcgcctttgttgatgttcttgagaaaga-aagatgaagtttgagttttacct |
772 |
T |
|
| Q |
129 |
gtggttttc |
137 |
Q |
| |
|
||| ||||| |
|
|
| T |
771 |
gtgattttc |
763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0354 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0354
Description:
Target: scaffold0354; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 1793 - 1718
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
1793 |
agatctacacttgattcgtctttgttgatgttcttgagaaaaaaaagatgaagtttgagttttacctgtgattttc |
1718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 18816441 - 18816518
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc |
137 |
Q |
| |
|
||||||| |||||||||||||||||| | ||||||||||||| | |||||||| ||||||||||||||||| ||||| |
|
|
| T |
18816441 |
tacagatctacacttgattcgcctttgttgatgttcttgcgaaaga-aagatgaattttgagttttacctgtgattttc |
18816518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 29626848 - 29626735
Alignment:
| Q |
62 |
agatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggtttt-cttggtgattccgaaccggatctt |
160 |
Q |
| |
|
|||| ||||||||||||| |||| | |||||||| |||||| | |||||||||||||||||||||||| |||| |||| |||| ||||| |||||| |
|
|
| T |
29626848 |
agatctacacttgattcgtctttgttgatgttcttgagaaaaaaaggatgaagtttgagttttacctgtgattttggttggagatttcgaacgagatctt |
29626749 |
T |
|
| Q |
161 |
caggaaaacttgaat |
175 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
29626748 |
c-ggaaaacttgaat |
29626735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 27294180 - 27294296
Alignment:
| Q |
59 |
tacagatttacacttgattcgcctttttctctgttcttgcgaaaaagaagatgaagtttgagttttacctgtggttttc--ttggtgattccgaaccgga |
156 |
Q |
| |
|
||||||| | |||||||||||||||| | |||||||| | || | |||||||||||||||||||||||||| ||||| |||| |||| ||||| || |
|
|
| T |
27294180 |
tacagatctgcacttgattcgcctttgttgatgttcttgagcaaga-aagatgaagtttgagttttacctgtgattttcggttggagatttcgaacgaga |
27294278 |
T |
|
| Q |
157 |
tcttcaggaaaacttgaat |
175 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
27294279 |
tcttc-ggaaaacttgaat |
27294296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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