View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8621_low_21 (Length: 228)

Name: NF8621_low_21
Description: NF8621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8621_low_21
NF8621_low_21
[»] chr7 (3 HSPs)
chr7 (5-227)||(18133751-18133974)
chr7 (19-221)||(14342878-14343081)
chr7 (23-218)||(18171858-18172054)
[»] chr1 (1 HSPs)
chr1 (5-227)||(41380539-41380762)
[»] chr3 (5 HSPs)
chr3 (5-227)||(10781913-10782135)
chr3 (5-228)||(14693441-14693665)
chr3 (30-228)||(13307090-13307289)
chr3 (19-228)||(7402201-7402411)
chr3 (30-221)||(10150568-10150760)
[»] chr4 (2 HSPs)
chr4 (5-221)||(13289589-13289806)
chr4 (35-221)||(14772789-14772976)
[»] chr8 (2 HSPs)
chr8 (20-221)||(17423076-17423278)
chr8 (32-227)||(22348980-22349176)
[»] scaffold0130 (1 HSPs)
scaffold0130 (32-227)||(42927-43123)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-227)||(11116-11339)
[»] scaffold0319 (2 HSPs)
scaffold0319 (30-227)||(9420-9618)
scaffold0319 (5-221)||(11412-11629)
[»] scaffold0016 (1 HSPs)
scaffold0016 (32-221)||(126781-126971)
[»] chr2 (2 HSPs)
chr2 (32-221)||(22638100-22638290)
chr2 (5-227)||(23200845-23201068)
[»] chr6 (2 HSPs)
chr6 (30-221)||(19035400-19035592)
chr6 (32-218)||(23434887-23435074)
[»] scaffold0108 (1 HSPs)
scaffold0108 (5-227)||(25963-26186)
[»] scaffold0064 (1 HSPs)
scaffold0064 (12-227)||(37809-38025)
[»] scaffold0026 (1 HSPs)
scaffold0026 (32-221)||(139195-139385)
[»] scaffold0040 (1 HSPs)
scaffold0040 (30-221)||(29402-29594)
[»] scaffold0005 (1 HSPs)
scaffold0005 (35-221)||(66754-66941)
[»] scaffold0241 (1 HSPs)
scaffold0241 (23-221)||(11247-11446)
[»] scaffold0023 (2 HSPs)
scaffold0023 (32-227)||(65034-65230)
scaffold0023 (32-227)||(74212-74408)
[»] scaffold0282 (1 HSPs)
scaffold0282 (35-221)||(5760-5947)
[»] chr5 (1 HSPs)
chr5 (177-220)||(21510918-21510961)
[»] scaffold0001 (1 HSPs)
scaffold0001 (177-221)||(126982-127026)
[»] scaffold0362 (1 HSPs)
scaffold0362 (177-221)||(14368-14412)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-114)||(159395-159498)
[»] scaffold0656 (1 HSPs)
scaffold0656 (12-219)||(4804-5012)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 18133974 - 18133751
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    ||||||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18133974 aatccacctgctaattctcccacagacacttgggtcttttcaggaggaagaaagtctggctactctgcccctccaaccaaatgggtaaaaagaaaagtcc 18133875  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||||    
T  18133874 ccgctcctcgagttgaggcgccaagatcgcctactaggtatccttataataataattacaaggggcagcagtctatgacgcgaactcaatggcgtaggta 18133775  T
Q  204 tcaacgccagaaaaaagccacagc 227  Q
    ||||||||||||||||||||||||    
T  18133774 tcaacgccagaaaaaagccacagc 18133751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 14343081 - 14342878
Alignment:
Q  19 ttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagtt 117  Q
    |||||||||  ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| || |||||||| || ||||||||| |     
T  14343081 ttctcccacagacacttgggtcttttcaggaggaaggaagtctggttactctgcccctccaaccaaatgggtgaagagaaaagttcctgctcctcgactc 14342982  T
Q  118 gaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaa 217  Q
    || | ||||  || |||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||||| ||||||||||    
T  14342981 gatgtgccagaattgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggtatcagcgccagaaaa 14342882  T
Q  218 aagc 221  Q
    ||||    
T  14342881 aagc 14342878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 18172054 - 18171858
Alignment:
Q  23 cccaccaacacttgggtcttttcaggaggaagaaagtctggctactctg-ccctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgagg 121  Q
    |||||| | |||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||| || ||||| || ||  |||||| | ||||||    
T  18172054 cccaccgatacttgggtcttttcaggaggaagaaaatctggctattctgcccctccatccaaatgggtgaagagaaaggttcctactcctcaacttgagg 18171955  T
Q  122 cgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaa 218  Q
     ||||  |  |||||| |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||||||||| || ||||||||    
T  18171954 tgccagaagagcctaccaggtatgcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtaggtatcagcgtcagaaaaa 18171858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 41380762 - 41380539
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |    
T  41380762 aatccacctgcaaattctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgcccctccaaccaaatgggtaaagaaaaaagtgc 41380663  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    | ||||||||||| ||||  |||||||||||||| ||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  41380662 ccgctcctcgagtcgaggtaccaagatcgcctaccaggtatccttataataataattacaagggacagcagcctatgacgcgaactcaatggcgtaggta 41380563  T
Q  204 tcaacgccagaaaaaagccacagc 227  Q
    ||||||||||||||||||||||||    
T  41380562 tcaacgccagaaaaaagccacagc 41380539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 10781913 - 10782135
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||| |||||||| |    
T  10781913 aatccacctgcaaattctcccaccaacacttgggttttttcaggaggaagaaaatctggttactctgcccctccaactaaatgggtaaagagaaaagtac 10782012  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    | |||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||| | | || ||||  ||||||||||||||||||||||||||    
T  10782013 ccgctcctcgagttgaggcgccaagatcgcctaccaggtatccctataataataattacaggcgacaacagccaatgacgcgaactcaatggcgtaggta 10782112  T
Q  204 tcaacgccagaaaaaagccacagc 227  Q
    |||||||||| |||||||||||||    
T  10782113 tcaacgccag-aaaaagccacagc 10782135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 14693665 - 14693441
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    |||||| |||||| |||||||||  | ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||    
T  14693665 aatccatctgcaaattctcccacagatacttgggtctttttaggaggaagaaagtctggctactctacccctccaaccaaatgggtgaagagaaaagtcc 14693566  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    | ||||||||| |||| | ||||  || |||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||    
T  14693565 ccgctcctcgacttgatgtgccagaattgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggta 14693466  T
Q  204 tcaacgccagaaaaaagccacagct 228  Q
    |||||||||||||||||| ||||||    
T  14693465 tcaacgccagaaaaaagcaacagct 14693441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 228
Target Start/End: Complemental strand, 13307289 - 13307090
Alignment:
Q  30 acacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaag 128  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| || |||||||| || ||||||||| |||| | ||||      
T  13307289 acacttgggtcttttcaggaggaagaaagtctggctattctgcccctccaaccaaattggtgaagagaaaagttcctgctcctcgacttgatgtgccaga 13307190  T
Q  129 atcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagccacagct 228  Q
    || |||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  13307189 attgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggtatcaaccccagaaaaaagcaacagct 13307090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 7402411 - 7402201
Alignment:
Q  19 ttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagtt 117  Q
    |||||||||  |||| |||||||||||||||||||  |||||||| |||||||||| ||||||||||||||| || ||| |||| || || |||||| |     
T  7402411 ttctcccacggacacgtgggtcttttcaggaggaaagaagtctggttactctgcccctccaaccaaatgggtgaagagacaagttcctgcccctcgactc 7402312  T
Q  118 gaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaa 217  Q
     | | ||||  || |||||| |||||| |||||||||  |||||||| ||  |||| | |||||||||||||||||||||||||||||| ||||||||||    
T  7402311 aatgtgccagaattgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacgcgaactcaatggcgtaggtatcagcgccagaaaa 7402212  T
Q  218 aagccacagct 228  Q
    |||| ||||||    
T  7402211 aagcaacagct 7402201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 10150568 - 10150760
Alignment:
Q  30 acacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaag 128  Q
    ||||||||||||||||||||||||| || |||||||| ||||||| |||| | |||||||| ||||||||||| || ||||||| |  ||||||||||      
T  10150568 acacttgggtcttttcaggaggaaggaaatctggctattctgcccctccagcaaaatgggtgaaaagaaaagttcctgctcctccatgtgaggcgccaga 10150667  T
Q  129 atcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    |  |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||  |||||||||||||| |||||||||||||||||||||||    
T  10150668 agtgcctagcaggtatgcttacaataataactacaaaggtaagcaacctatgatacgaactcaatggcgcaggtatcaacgccagaaaaaagc 10150760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 13289806 - 13289589
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    |||||| ||||||  || |||||  |||||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||| || ||||| ||||    
T  13289806 aatccatctgcaaactcccccactgacacttgggtcttttcaggaggaagaaaatctggctattctgcccctccatccaaatgggtgaagagaaaggtcc 13289707  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    |  |||||||| |||| ||||||  |  |||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||    
T  13289706 ctactcctcgacttgatgcgccagaagtgcctaccaggtattcttataataataattacaaaggtaagcatcctatgacacgaactcaatggcgtaggta 13289607  T
Q  204 tcaacgccagaaaaaagc 221  Q
    ||| ||||||||||||||    
T  13289606 tcagcgccagaaaaaagc 13289589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 221
Target Start/End: Complemental strand, 14772976 - 14772789
Alignment:
Q  35 tgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagatcg 132  Q
    |||||||||||||| || |||||| ||||| || ||||| ||||||||||||||||| || |||||  |||| |||||||||  ||| ||||||  |  |    
T  14772976 tgggtcttttcaggtggcaagaaa-tctggatattctgctcctccaaccaaatgggtgaagagaaagatccctgctcctcgacatgatgcgccagaagtg 14772878  T
Q  133 cctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    ||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| ||||||||||||||||||||    
T  14772877 cctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaacgccagaaaaaagc 14772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 17423278 - 17423076
Alignment:
Q  20 tctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttg 118  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| || || | |||| |||    
T  17423278 tctcccacagacacttgggtcttttcgggaggaagaaagtctggctattctgctcctccaaccaaatgggtgaagagaaaagttcctgcccttcgacttg 17423179  T
Q  119 aggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaa 218  Q
    | | ||||  |  |||||| |||||| |||||||||  |||||||| ||  |||| | |||||| |||||||||||||||||||| ||||||||||||||    
T  17423178 atgtgccagaactgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggtaacaacgccagaaaaa 17423079  T
Q  219 agc 221  Q
    |||    
T  17423078 agc 17423076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 22349176 - 22348980
Alignment:
Q  32 acttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaaga 129  Q
    ||||||||||||||||| || |||||| ||||| || ||||| || ||| |||||||||| || |||||  |||| |||||||||  ||| ||||||  |    
T  22349176 acttgggtcttttcagggggcaagaaa-tctggatattctgctcccccatccaaatgggtgaagagaaagatccctgctcctcgacatgatgcgccagaa 22349078  T
Q  130 tcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagccacagc 227  Q
      |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| |||||| || |||||||||| |||||    
T  22349077 gtgcctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaaagcaagaaaaaagcaacagc 22348980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 42927 - 43123
Alignment:
Q  32 acttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagat 130  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||| || ||||| || ||  |||||||| |||| | ||||  ||    
T  42927 acttgggtcttttcaggaggaagaaaatctggctattctgcccctccatccaaatgggtgaagagaaaggttccttctcctcgacttgatgtgccagaat 43026  T
Q  131 cgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagccacagc 227  Q
     ||||||||||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||||| ||||||||||| || |||||    
T  43027 tgcctactaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggtatcagcgccagaaaaaggcaacagc 43123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 11116 - 11339
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctg-ccctccaaccaaatgggtaaaaagaaaagtcc 103  Q
    |||||| ||||||  || |||||  |||||||||||||||||||||||||||| ||||| || |||| ||||||| |||||||||| || |||||||| |    
T  11116 aatccatctgcaaactcccccactgacacttgggtcttttcaggaggaagaaaatctggttattctgtccctccatccaaatgggtgaagagaaaagttc 11215  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
       |||||||| |||| ||||||  |  |||||| |||||| |||| ||||  |||||||| ||  |||||| |||||| ||||||||||||||||||||    
T  11216 ttactcctcgacttgaagcgccagaagtgcctaccaggtattcttacaataataattacaaaggtaagcagcctatgacacgaactcaatggcgtaggta 11315  T
Q  204 tcaacgccagaaaaaagccacagc 227  Q
    ||| |||||||||||||| |||||    
T  11316 tcagcgccagaaaaaagcaacagc 11339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 30 - 227
Target Start/End: Original strand, 9420 - 9618
Alignment:
Q  30 acacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaag 128  Q
    |||||||||||||||||||||||||||| ||||| || ||||||| |||| |||||||||| || ||||| || ||  |||||||| |||| ||||||      
T  9420 acacttgggtcttttcaggaggaagaaaatctggttaatctgcccctccatccaaatgggtgaagagaaaggttcctactcctcgacttgatgcgccaga 9519  T
Q  129 atcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagccacagc 227  Q
    |  |||||| |||||| |||||||||  |||||| | ||  |||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  9520 agtgcctaccaggtattcttataataataattacgaaggtaagcaacctatgacgcgaactcaatggcgtaggtatcagcgccagaaaaaagcaacagc 9618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 11412 - 11629
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    |||||| |||||| ||| |||||  |||||||||||||||||||||||||||| ||||| || ||||||| |||| |||||||||| || ||||| || |    
T  11412 aatccatctgcaaattcccccactgacacttgggtcttttcaggaggaagaaaatctggttattctgcccctccatccaaatgggtgaagagaaaggttc 11511  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    |   ||||||| | || ||||||  |  |||||| |||||| |||||||||  |||||||| ||  |||| | |||||||||||||||||||||||||||    
T  11512 ctaatcctcgactagatgcgccagaagtgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacgcgaactcaatggcgtaggta 11611  T
Q  204 tcaacgccagaaaaaagc 221  Q
    ||| ||||||||||||||    
T  11612 tcagcgccagaaaaaagc 11629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 126971 - 126781
Alignment:
Q  32 acttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagat 130  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||| |||||||| || || ||||||||| |||| | ||||  ||    
T  126971 acttgggtcttttcaggaggaagaaaatctggctattctgcccctccatccaaatgggtgaaaagaaaggttcctgctcctcgacttgatgtgccagaat 126872  T
Q  131 cgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
      ||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  126871 ttcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcagcgccagaaaaaagc 126781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 221
Target Start/End: Original strand, 22638100 - 22638290
Alignment:
Q  32 acttgggtcttttcaggaggaagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagat 130  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||| |||||||||| |||||||| || || ||||||||| |||| | ||||  ||    
T  22638100 acttgggtcttttcaggaggaagaaaatctggctattctgcacctccatccaaatgggtgaaaagaaaggttcctgctcctcgacttgatgtgccagaat 22638199  T
Q  131 cgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
      ||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  22638200 ttcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcagcgccagaaaaaagc 22638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 23201068 - 23200845
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    |||||| ||||||  || |||||  |||||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||| || ||||| || |    
T  23201068 aatccatctgcaaactcccccactgacacttgggtcttttcaggaggaagaaaatctggctattctgcccctccagccaaatgggtgaagagaaaggttc 23200969  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    | |||||||||  ||| | |||   || |||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||    
T  23200968 ctgctcctcgacctgatgtgccggaattgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggta 23200869  T
Q  204 tcaacgccagaaaaaagccacagc 227  Q
    ||| ||| |||||||||| |||||    
T  23200868 tcagcgctagaaaaaagcaacagc 23200845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 19035592 - 19035400
Alignment:
Q  30 acacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaag 128  Q
    ||||||||||||||||||||||||| || |||||||| ||||||| |||| |||||||||| ||||| ||||| || ||||||||| |||||||||||      
T  19035592 acacttgggtcttttcaggaggaaggaaatctggctattctgcccctccagccaaatgggtgaaaaggaaagttcctgctcctcgatttgaggcgccaga 19035493  T
Q  129 atcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    |  |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| |||||||||||||| |||||||||||||||||||||||    
T  19035492 agtgcctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgcaggtatcaacgccagaaaaaagc 19035400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 23434887 - 23435074
Alignment:
Q  32 acttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagat 130  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| |||| |||||||||| |||||||| ||||| ||| ||||| |||| | ||||  ||    
T  23434887 acttgggtcttttcaggaggaagaaaatctggctattctacccctccatccaaatgggtgaaaagaaaggtccctgctgctcgacttgatgtgccagaat 23434986  T
Q  131 cgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaa 218  Q
      ||||| |||||| |||||||||  |||||||| ||  |||| | |||||| ||||||||||||||||||||||| |||||||||||    
T  23434987 tacctaccaggtattcttataataataattacaaaggtaagcaacctatgacacgaactcaatggcgtaggtatcagcgccagaaaaa 23435074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 25963 - 26186
Alignment:
Q  5 aatccacctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcc 103  Q
    |||||| |||||| ||| |||||  |||||||||||||||||||||||||||| ||||| ||  |||||| |||| |||||||||| || ||||| || |    
T  25963 aatccatctgcaaattcccccactgacacttgggtcttttcaggaggaagaaaatctggttatgctgcccctccatccaaatgggtgaagagaaaggttc 26062  T
Q  104 cggctcctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggta 203  Q
    |  | ||||   | || || |||  |  |||||| |||||| |||||||||  |||||||| ||  |||| | |||||||||||||||||||||||||||    
T  26063 ctacccctcagctcgatgcaccagaagtgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacgcgaactcaatggcgtaggta 26162  T
Q  204 tcaacgccagaaaaaagccacagc 227  Q
    ||| ||| |||||||||| |||||    
T  26163 tcagcgctagaaaaaagcaacagc 26186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 227
Target Start/End: Complemental strand, 38025 - 37809
Alignment:
Q  12 ctgcaagttctcccaccaacacttgggtcttttcaggaggaagaaagtctggctactctgccc-tccaaccaaatgggtaaaaagaaaagtcccggctcc 110  Q
    |||||| ||| ||||| |||||||||||| |||||||||||||||| ||||| ||  |||||| | || |||||||||| || ||||| || ||  | ||    
T  38025 ctgcaaattcccccactaacacttgggtcatttcaggaggaagaaaatctggttatgctgccccttcatccaaatgggtgaagagaaaggttcctacccc 37926  T
Q  111 tcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgc 210  Q
    ||   | ||  |||||  |  |||||| |||||| |||||||||  |||||||| ||  |||| | |||||||||||||||||||||||||||||| |||    
T  37925 tcagctcgatacgccagaagtgcctaccaggtattcttataataataattacaaaggtaagcaacctatgacgcgaactcaatggcgtaggtatcagcgc 37826  T
Q  211 cagaaaaaagccacagc 227  Q
    ||||||||||| |||||    
T  37825 cagaaaaaagcaacagc 37809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 139385 - 139195
Alignment:
Q  32 acttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaaga 129  Q
    |||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||| || |||||  |||| |||||||||   || ||||||  |    
T  139385 acttgggtcttttcaggaggcaagaaa-tctggatactctgctcctccaaccaaatgggtgaagagaaagatcccagctcctcgacaggatgcgccagaa 139287  T
Q  130 tcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
      ||||| ||||||| |||| ||||  || ||||| ||  || | | |||||| ||||||||||||||||| || |||||||||||||||||    
T  139286 gtgcctagtaggtattcttacaataataactacaaaggtaagaaacctatgacacgaactcaatggcgtagataccaacgccagaaaaaagc 139195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 29402 - 29594
Alignment:
Q  30 acacttgggtcttttcaggaggaagaaagtctggctactctg-ccctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaag 128  Q
    ||||||||||||||||||||||||| || |||||||| || | ||||||| | |||||||| ||||||||||| || |||| || |  |||||| |||      
T  29402 acacttgggtcttttcaggaggaaggaaatctggctattccgcccctccagcaaaatgggtgaaaagaaaagttcctgctcttccatgtgaggcaccaga 29501  T
Q  129 atcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    |  |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| |||||||||||||| ||||| ||||||||||| |||||    
T  29502 agtgcctagcaggtatgcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgcaggtaccaacgccagaagaaagc 29594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 221
Target Start/End: Original strand, 66754 - 66941
Alignment:
Q  35 tgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagatcg 132  Q
    |||||||||||||| || |||||| ||||| || ||||| ||||||||||||||||| || |||||  |||| |||||||||  ||| ||||||  |  |    
T  66754 tgggtcttttcaggtggcaagaaa-tctggatattctgctcctccaaccaaatgggtgaagagaaagatccctgctcctcgacatgatgcgccagaagtg 66852  T
Q  133 cctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    ||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| ||||||||||||||||||||    
T  66853 cctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaacgccagaaaaaagc 66941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 11247 - 11446
Alignment:
Q  23 cccaccaacacttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgag 120  Q
    ||||| || |||||||||||||||||||| |||||| ||||| || ||||| || ||| |||||||||| || |||||  || | |||||||||  |||     
T  11247 cccactaatacttgggtcttttcaggaggtaagaaa-tctggatattctgctcccccatccaaatgggtgaagagaaagatcactgctcctcgacatgat 11345  T
Q  121 gcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaag 220  Q
    ||||||  |  |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| |||||||||||||||||||    
T  11346 gcgccagaagtgcctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaacgccagaaaaaag 11445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 65034 - 65230
Alignment:
Q  32 acttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaaga 129  Q
    |||||||||||| ||||||| |||||| ||||| || ||||| || ||| |||||||||| || |||||  || | |||||||||  ||| ||||||  |    
T  65034 acttgggtctttccaggaggtaagaaa-tctggatattctgctcccccatccaaatgggtgaagagaaagatctctgctcctcgacatgatgcgccagaa 65132  T
Q  130 tcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagccacagc 227  Q
      |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  65133 gtgcctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaacgccagaaaaaagcaacagc 65230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 74212 - 74408
Alignment:
Q  32 acttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaaga 129  Q
    |||||||||||| ||||||| |||||| ||||| || ||||| || ||| |||||||||| || |||||  || | |||||||||  ||| ||||||  |    
T  74212 acttgggtctttccaggaggtaagaaa-tctggatattctgctcccccatccaaatgggtgaagagaaagatctctgctcctcgacatgatgcgccagaa 74310  T
Q  130 tcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagccacagc 227  Q
      |||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  74311 gtgcctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaacgccagaaaaaagcaacagc 74408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 221
Target Start/End: Complemental strand, 5947 - 5760
Alignment:
Q  35 tgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctcctcgagttgaggcgccaagatcg 132  Q
    |||||||||||||| || |||||| ||||| || ||||| |||||||| |||||||| || |||||  |||| |||||||||  ||| ||||||  |  |    
T  5947 tgggtcttttcaggtggcaagaaa-tctggatattctgctcctccaactaaatgggtgaagagaaagatccctgctcctcgacgtgatgcgccagaagtg 5849  T
Q  133 cctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    ||||  |||||| |||| ||||  || ||||| ||  |||| | |||||| ||||||||||||||||| |||||| |||||||||||||    
T  5848 cctagcaggtattcttacaataataactacaaaggtaagcaacctatgacacgaactcaatggcgtagatatcaatgccagaaaaaagc 5760  T

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Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 21510918 - 21510961
Alignment:
Q  177 tatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaag 220  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  21510918 tatgacacgaactcaatggcgtaggtatcaacgccagaaaaaag 21510961  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 127026 - 126982
Alignment:
Q  177 tatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  127026 tatgacacgaactcaatggcgtagatatcaacgccagaaaaaagc 126982  T

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Target: scaffold0362 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 14368 - 14412
Alignment:
Q  177 tatgacgcgaactcaatggcgtaggtatcaacgccagaaaaaagc 221  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||    
T  14368 tatgacgagaactcaatggcgtaggtaccagcgccagaaaaaagc 14412  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 159498 - 159395
Alignment:
Q  12 ctgcaagttctcccaccaacacttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctc 109  Q
    ||||||| || |||||  |||||||||||||||||||||| |||||| ||||| || ||||| || |||||||||||||| || |||||  |||| ||||    
T  159498 ctgcaaggtcccccactgacacttgggtcttttcaggaggcaagaaa-tctggatattctgctcccccaaccaaatgggtgaagagaaagatccctgctc 159400  T
Q  110 ctcga 114  Q
    |||||    
T  159399 ctcga 159395  T

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Target: scaffold0656 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 4804 - 5012
Alignment:
Q  12 ctgcaagttctcccaccaacacttgggtcttttcaggagg-aagaaagtctggctactctgc-cctccaaccaaatgggtaaaaagaaaagtcccggctc 109  Q
    ||||||| || |||||  |||||||||||||||||||||| |||||| ||||| || ||||| || ||||| |||||||| || |||||  |||| ||||    
T  4804 ctgcaaggtcccccactgacacttgggtcttttcaggaggcaagaaa-tctggatattctgctcccccaactaaatgggtgaagagaaagatccctgctc 4902  T
Q  110 ctcgagttgaggcgccaagatcgcctactaggtatccttataatataaattacaaggggcagcagcttatgacgcgaactcaatggcgtaggtatcaacg 209  Q
    |||||   ||||||| |  |  ||||| ||||||  |||| ||||  || ||||| ||  |||| | ||||||  |||||||||||||||| || || ||    
T  4903 ctcgacaagaggcgctagaagtgcctagtaggtacgcttacaataataactacaaaggtaagcaacctatgacatgaactcaatggcgtagataccagcg 5002  T
Q  210 ccagaaaaaa 219  Q
    | ||||||||    
T  5003 ctagaaaaaa 5012  T

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