View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8622_high_18 (Length: 243)
Name: NF8622_high_18
Description: NF8622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8622_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 37306345 - 37306141
Alignment:
| Q |
15 |
aataaacatttagtttgtggttatttaaaaaggttatttcagcttatctctcttatagtgacattatatatatcccgtggtgaaagtctcttatctcctc |
114 |
Q |
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| T |
37306345 |
aataaacatttactttctggttatttaaaaaagttatttcagcttatctctcttaatgtgacattatat----cccgtggtgaa---------tctcctc |
37306259 |
T |
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| Q |
115 |
ataactatgttgtaggatttgtgtagagtaacaaataaattagtttatcgtattgttagagcattatgttgcttgccttctcatagtttatagaattgtc |
214 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37306258 |
ataactatgttgtaggatttgtctagagtaacaaataaattagtttatcgtattgttagagcattatgttgcttgccttctcatagtttatagtattgtc |
37306159 |
T |
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| Q |
215 |
ccatattttctgtgatgt |
232 |
Q |
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||||||||||| |||||| |
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| T |
37306158 |
ccatattttctatgatgt |
37306141 |
T |
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