View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8625_high_8 (Length: 239)
Name: NF8625_high_8
Description: NF8625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8625_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29136407 - 29136629
Alignment:
| Q |
1 |
cagaggagattagtcacaatcaaactcagttgaatactttgtacgtatgatatggctataaattcactgcatgttttctcagggtagtattgtactgagt |
100 |
Q |
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| T |
29136407 |
cagaggagattagtcacaatcaaactcagttgaatactttgtacgtatgatatggctataaattcactgcatgttttctcagggtagtattgtattgagt |
29136506 |
T |
|
| Q |
101 |
ctatttatttgtgtttctttattctaattatctgactcaattgaatttcaagttttagtattattgatctcatataacttcaccttaaagcattgatggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29136507 |
ctatttatttgtgtttctttattctaattatctgactcaattgaatttcaagttttagtattattgatctcatataacttcaccttaaagcattgatggc |
29136606 |
T |
|
| Q |
201 |
aattatacactgcatgttctttt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
29136607 |
aattatacactgcatgttctttt |
29136629 |
T |
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