View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8626_low_6 (Length: 345)
Name: NF8626_low_6
Description: NF8626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8626_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 29696391 - 29696720
Alignment:
| Q |
1 |
agtaatcatatgtttacaaattgtgatttgaaaagattagcatctcacatcaatggtctgttggagaaataagtattttccttctgttttgtagttggat |
100 |
Q |
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| T |
29696391 |
agtaatcatatgtttacaaattgtgatttgaaaagattagcatctcacatcaatggtctgttggagaaataagtattttccttctgttttgtagttggat |
29696490 |
T |
|
| Q |
101 |
atcaatatttcttctctagtcagatacacagaagtatagtttatggagataaaccacgaaataggtatgctttatttatattttaactctgtattcatgg |
200 |
Q |
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| T |
29696491 |
atcaatatttcttctctagtcagatacacagaagtatagtttatggagataaaccacgaaataggtatgctttatttatattttaactctgcattcatag |
29696590 |
T |
|
| Q |
201 |
ttctaagtactgtaattttgattaatagtatatttcctttgcaggcttgacttgtttttgcctaaaaatagcgacggaccaaaaccagttgttgctttca |
300 |
Q |
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| T |
29696591 |
taataagtactgtaattttgattaatagtatatttcctttgcaggcttgacttgtttttgcctaaaaatagcgacgggccaaaaccagttgttgctttca |
29696690 |
T |
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| Q |
301 |
ttactggtggagcctggattattgggtatg |
330 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
29696691 |
ttactggtggagcctggattattgggtatg |
29696720 |
T |
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