View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8627_high_2 (Length: 248)
Name: NF8627_high_2
Description: NF8627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8627_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 23192155 - 23192387
Alignment:
| Q |
16 |
gacatcagtcacgtcttcaatctgaagtatcagtgctatgctaggtgctaatttgtgttttgaatgtattgtctcaatgctttgttcaggctggctacag |
115 |
Q |
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| T |
23192155 |
gacatcagtcacgtcttcaatctgaagtatcagtgctatgctaggtgctaatttgtgttttgaatgtattgtctcaatgctttgttcaggctggctacag |
23192254 |
T |
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| Q |
116 |
acatatcgattgtgctcgggtatatgataatgaaaaagaggtaaccaaaattataaagtttatttgaaataaatagttttgtatactaatattctaggtg |
215 |
Q |
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| T |
23192255 |
acatatcgattgtgctcgggtatatgataatgaaaaagaggtaaccaaaattataaagtttatttgaaataaatagttttgtatactaatattctaggtg |
23192354 |
T |
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| Q |
216 |
gtcaagaaaaaattgtttttattgttctggttt |
248 |
Q |
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| T |
23192355 |
gtcaagaaaaaattgtttttattgttctggttt |
23192387 |
T |
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