View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8629_high_11 (Length: 324)
Name: NF8629_high_11
Description: NF8629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8629_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 41184147 - 41184297
Alignment:
| Q |
3 |
ttttgaggtgaaacataatttgtgtttgtataagaaaatgattacttcctatgtttcatagccgctatatttataacnnnnnnnntctcaaaaataatgt |
102 |
Q |
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| T |
41184147 |
ttttgaggtgaaacataatttgtgtttgtataagaaaatgatttcttcctatgtttcatagccgttatatttataacaaaaagaatctcaaaaataatgt |
41184246 |
T |
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| Q |
103 |
caattttaattttaaatggagttttaattgactatattttctacccgtatc |
153 |
Q |
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| T |
41184247 |
caattttaattttaaatggagttttaattgactatattttctacccgtatc |
41184297 |
T |
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