View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8630_high_7 (Length: 237)

Name: NF8630_high_7
Description: NF8630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8630_high_7
NF8630_high_7
[»] chr8 (6 HSPs)
chr8 (40-220)||(20130482-20130664)
chr8 (40-111)||(30359642-30359714)
chr8 (46-111)||(9608784-9608850)
chr8 (40-111)||(70327-70399)
chr8 (40-107)||(1513972-1514040)
chr8 (40-111)||(30359304-30359376)
[»] chr7 (7 HSPs)
chr7 (40-220)||(44361406-44361588)
chr7 (46-111)||(7554064-7554130)
chr7 (46-111)||(1085669-1085735)
chr7 (46-111)||(45754754-45754820)
chr7 (63-111)||(118354-118402)
chr7 (40-111)||(7517613-7517685)
chr7 (40-111)||(22566715-22566787)
[»] chr1 (4 HSPs)
chr1 (40-111)||(38804408-38804480)
chr1 (46-111)||(41759522-41759588)
chr1 (40-111)||(17294610-17294682)
chr1 (46-111)||(34364964-34365030)
[»] chr6 (6 HSPs)
chr6 (40-111)||(2578496-2578568)
chr6 (46-109)||(2378165-2378229)
chr6 (46-111)||(29518542-29518608)
chr6 (46-111)||(29518959-29519025)
chr6 (46-111)||(32741218-32741284)
chr6 (40-111)||(2377787-2377859)
[»] chr2 (5 HSPs)
chr2 (51-111)||(5367499-5367560)
chr2 (46-111)||(6422149-6422215)
chr2 (40-111)||(15880296-15880368)
chr2 (63-111)||(31259669-31259717)
chr2 (63-111)||(37632650-37632698)
[»] chr5 (3 HSPs)
chr5 (46-111)||(624235-624301)
chr5 (46-111)||(32487433-32487498)
chr5 (40-111)||(26074645-26074717)
[»] chr4 (3 HSPs)
chr4 (46-111)||(25483375-25483441)
chr4 (46-111)||(54017646-54017712)
chr4 (51-111)||(44620704-44620764)
[»] scaffold0702 (1 HSPs)
scaffold0702 (40-111)||(567-639)


Alignment Details
Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 20130482 - 20130664
Alignment:
Q  40 aaagactaaaagttgaacacttttaagtaagatgatccataaacccataaccttacggttttaggtaagagtaggttaatgnnnnnnnn--agccttcgt 137  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||||    
T  20130482 aaagagtaaaagttgaacacctttaagtaagatgatccataaacccataaccttacggttttaggtaagagtagattaatgttttttttttagccttcgt 20130581  T
Q  138 tagatcactaaattaattttcgagttatttatgttctcgtcatagatgtattggaaaatagttttaaatttattatatttttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20130582 tagatcactaaattaattttcgagttatttatgttctcgtcatagatgtattggaaaatagttttaaatttattatatttttg 20130664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 30359642 - 30359714
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||||||||||||| || ||||||||| ||  |||||||||||||||||| | |||| |||||||||    
T  30359642 aaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagt 30359714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 9608784 - 9608850
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || |||||||||||| |||||||||||| |||||| |||||| |||| ||||    
T  9608784 taaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggtatgagt 9608850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 70399 - 70327
Alignment:
Q  40 aaagactaaaagttgaaca-cttttaagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| |||||||| ||| ||||||||| || |||||||||||   ||||| ||||||||||||||||    
T  70399 aaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagt 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 1514040 - 1513972
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaa 107  Q
    ||||| |||| ||||||||| || ||||||||| || || |||||||||||||||| |||||| |||||    
T  1514040 aaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaa 1513972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 30359304 - 30359376
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || |||| |||| || ||||||||||||| ||||| |||||| |||||||||    
T  30359304 aaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaagagt 30359376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 44361588 - 44361406
Alignment:
Q  40 aaagactaaaagttgaacacttttaagtaagatgatccataaacccataaccttacggttttaggtaagagtaggttaatgnnnnnnnn--agccttcgt 137  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||||    
T  44361588 aaagagtaaaagttgaacacctttaagtaagatgatccataaacccataaccttacggttttaggtaagagtagattaatgttttttttttagccttcgt 44361489  T
Q  138 tagatcactaaattaattttcgagttatttatgttctcgtcatagatgtattggaaaatagttttaaatttattatatttttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44361488 tagatcactaaattaattttcgagttatttatgttctcgtcatagatgtattggaaaatagttttaaatttattatatttttg 44361406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 7554064 - 7554130
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||||||||| |||||||||||||||| ||||| |||||| |||||||||    
T  7554064 taaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggtaagagt 7554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 1085735 - 1085669
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| |||||||||||| ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  1085735 taaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 1085669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 45754754 - 45754820
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||||||||||||  |||||||||||| ||||| |||||| |||||||||    
T  45754754 taaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaagagt 45754820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 118402 - 118354
Alignment:
Q  63 taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||||||| ||||||||||||||| ||| || |||||| |||||||||    
T  118402 taagtaagaggatccataaacccattaccgtaaggttttgggtaagagt 118354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 7517613 - 7517685
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  7517613 aaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 7517685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 22566787 - 22566715
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  22566787 aaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 22566715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 38804480 - 38804408
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  38804480 aaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaagagt 38804408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 41759522 - 41759588
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||||||||||||| || |||||||||||||||||||| ||||  ||||| |||||| |||||||||    
T  41759522 taaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaagagt 41759588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 17294610 - 17294682
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| |||||||||||| ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  17294610 aaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 17294682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 34364964 - 34365030
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||||||||| || ||||||||||||| ||||| |||||| |||||||||    
T  34364964 taaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaagagt 34365030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 2578568 - 2578496
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| |||||||||||| ||||||||| || ||||||||||||| ||||| |||||| |||||||||    
T  2578568 aaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaagagt 2578496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 2378165 - 2378229
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaaga 109  Q
    |||| ||||||||| || ||||||||| || |||||||||||| |||||| ||||||||||||||    
T  2378165 taaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggtaaga 2378229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 29518542 - 29518608
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||||||||| || |||||||||||| |||||| |||||| |||||||||    
T  29518542 taaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagt 29518608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 29518959 - 29519025
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||||||||| || |||||||||||| |||||| |||||| |||||||||    
T  29518959 taaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagt 29519025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 32741218 - 32741284
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||||||||| || |||||||||||| |||||| |||||| |||||||||    
T  32741218 taaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagt 32741284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 2377787 - 2377859
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  2377787 aaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 2377859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 5367499 - 5367560
Alignment:
Q  51 gttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||||||| || ||||||||||||||||| ||| |||||||||| |||||| |||||||||    
T  5367499 gttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaagagt 5367560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 6422149 - 6422215
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || ||| ||||| || ||||||||||||| ||||| ||||||||||||||||    
T  6422149 taaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagt 6422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 15880296 - 15880368
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  15880296 aaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 15880368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 31259717 - 31259669
Alignment:
Q  63 taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||||||||||| ||||||||| || |||||| |||||| |||||||||    
T  31259717 taagtaagatgacccataaacctatcaccttaaggttttgggtaagagt 31259669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 37632698 - 37632650
Alignment:
Q  63 taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||||||| || ||||||||||||||| ||| |||||| |||||||||    
T  37632698 taagtaagaggacccataaacccataactttaaggttttgggtaagagt 37632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 624235 - 624301
Alignment:
Q  46 taaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| || |||||||||||| ||||||||||||| ||||  |||||| |||||||||    
T  624235 taaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaagagt 624301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 32487433 - 32487498
Alignment:
Q  46 taaaagttgaacacttttaagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| ||||||||| | ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  32487433 taaaggttgaacacctataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 32487498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 26074645 - 26074717
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  26074645 aaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 26074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 25483375 - 25483441
Alignment:
Q  46 taaaagttgaaca-cttttaagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| |||||||| ||| ||||||||| |||||||||||||||  ||||| |||||| |||||||||    
T  25483375 taaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggtaagagt 25483441  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 54017712 - 54017646
Alignment:
Q  46 taaaagttgaaca-cttttaagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||| |||||||| ||| ||||||||| || ||||||||||||  ||||| ||||||||||||||||    
T  54017712 taaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggtaagagt 54017646  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 44620704 - 44620764
Alignment:
Q  51 gttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    |||||||||||| ||||||||| || ||||||||| ||||||||| |||||| |||||||||    
T  44620704 gttgaacactttataagtaagaggacccataaacc-ataaccttaaggttttgggtaagagt 44620764  T

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Target: scaffold0702 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 639 - 567
Alignment:
Q  40 aaagactaaaagttgaacacttt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 111  Q
    ||||| |||| ||||||||| || ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  639 aaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 567  T

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