View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8631_high_11 (Length: 296)
Name: NF8631_high_11
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8631_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 16 - 283
Target Start/End: Original strand, 33816435 - 33816687
Alignment:
| Q |
16 |
tgtttttcagctgcctctgctgcttcaaaaaccttgtctgtcacattaaaagattagtatagtaatcaagttgatgctgccaattgttaaaaatataaga |
115 |
Q |
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| T |
33816435 |
tgtttttcagctgcctctgctgcttcaaaaaccttgtctgtcacattaaaagattagtatactaatcaagttgatgctaccacttgttaaaaatataaga |
33816534 |
T |
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| Q |
116 |
tggatgtgtactaaattggcttacatactttaatttaagcaatgttttaaaattaaatcggagatcaaacatgtgagacctccgtccgaatcatggttca |
215 |
Q |
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| T |
33816535 |
tggatgtgtactaaattggctgacatactttaatttaagcaatgttttgaaatcaaaccagagatcaaacatgtgagacc----tccgaatcatggttca |
33816630 |
T |
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| Q |
216 |
ataagttgaatcatggttgaattagatgaccaataaataagttttaaaaaatatagtattttgaagaa |
283 |
Q |
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| T |
33816631 |
ataagttgaatc-----------ggataaccaataaataagttttaaaaaatatagtattttgaagaa |
33816687 |
T |
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