View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8631_high_16 (Length: 239)
Name: NF8631_high_16
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8631_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 25839725 - 25839947
Alignment:
| Q |
1 |
tattaatctcatcaaagaatttatttggaccatctttattgaagtcttccatttgaataatatttttctatcctcgagactatactataatattggtaaa |
100 |
Q |
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| T |
25839725 |
tattaatctcatcaaagaatttatttggaccatctttattgaagtcttccatttgaataatatttttctatcctcgagactatactataatattggtaaa |
25839824 |
T |
|
| Q |
101 |
aggttgaaacatatgtttgttgttgatttggattcaaattgagtttattgatcactatgttacacataaataaaattcgtggtaaaaattttggtgcatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25839825 |
aggttgaaacatatgtttgttgttgatttggattcaaattgagtttattgatcactatgttacacataaataaaattcgtggtaaaaattttggtgcatg |
25839924 |
T |
|
| Q |
201 |
tttgaattgtgatagttttgatc |
223 |
Q |
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|||||||| |||||||||||||| |
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| T |
25839925 |
tttgaattctgatagttttgatc |
25839947 |
T |
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