View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8631_low_15 (Length: 410)

Name: NF8631_low_15
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8631_low_15
NF8631_low_15
[»] chr5 (43 HSPs)
chr5 (5-123)||(35932834-35932950)
chr5 (5-122)||(3246291-3246403)
chr5 (5-98)||(31146431-31146521)
chr5 (12-122)||(35987059-35987172)
chr5 (5-122)||(21100578-21100692)
chr5 (5-122)||(30116702-30116816)
chr5 (4-123)||(9399440-9399557)
chr5 (10-122)||(21199846-21199953)
chr5 (5-122)||(28138789-28138907)
chr5 (56-122)||(31487403-31487466)
chr5 (5-122)||(37395362-37395476)
chr5 (12-82)||(10848004-10848073)
chr5 (11-109)||(15516176-15516270)
chr5 (5-122)||(6498511-6498623)
chr5 (5-122)||(7746524-7746639)
chr5 (5-120)||(25097871-25097981)
chr5 (5-120)||(25156963-25157073)
chr5 (56-122)||(22000906-22000969)
chr5 (62-120)||(27276602-27276657)
chr5 (12-123)||(23407480-23407590)
chr5 (5-122)||(21076011-21076125)
chr5 (5-75)||(26764710-26764779)
chr5 (84-122)||(31144222-31144260)
chr5 (62-122)||(31589879-31589936)
chr5 (85-123)||(33021844-33021882)
chr5 (85-122)||(13533176-13533213)
chr5 (85-122)||(17456621-17456658)
chr5 (85-122)||(21702433-21702470)
chr5 (85-122)||(23477571-23477608)
chr5 (5-42)||(30742211-30742248)
chr5 (85-122)||(40033686-40033723)
chr5 (62-122)||(26120704-26120760)
chr5 (85-123)||(32753255-32753293)
chr5 (62-122)||(39799697-39799753)
chr5 (85-122)||(2157174-2157211)
chr5 (5-42)||(13546355-13546392)
chr5 (85-122)||(17446005-17446042)
chr5 (85-125)||(23407360-23407401)
chr5 (5-42)||(23880284-23880321)
chr5 (85-118)||(42242815-42242848)
chr5 (5-122)||(90261-90375)
chr5 (5-99)||(11993107-11993197)
chr5 (85-124)||(20625680-20625720)
[»] scaffold0488 (1 HSPs)
scaffold0488 (5-122)||(11396-11510)
[»] chr8 (38 HSPs)
chr8 (5-122)||(13431465-13431579)
chr8 (5-126)||(1744381-1744499)
chr8 (5-122)||(45292033-45292150)
chr8 (12-122)||(43773308-43773417)
chr8 (2-122)||(17541333-17541450)
chr8 (15-118)||(6406955-6407054)
chr8 (5-122)||(14990935-14991049)
chr8 (2-123)||(36104533-36104651)
chr8 (5-122)||(45539331-45539445)
chr8 (2-122)||(17007500-17007617)
chr8 (5-122)||(22672968-22673080)
chr8 (5-123)||(30422277-30422392)
chr8 (12-122)||(33561068-33561183)
chr8 (6-122)||(18121980-18122094)
chr8 (28-122)||(40846273-40846365)
chr8 (62-122)||(1210604-1210661)
chr8 (5-123)||(9319760-9319876)
chr8 (56-122)||(25163261-25163324)
chr8 (5-122)||(31445292-31445406)
chr8 (62-122)||(17287067-17287124)
chr8 (5-122)||(23264474-23264592)
chr8 (85-122)||(16376252-16376289)
chr8 (85-122)||(18565166-18565203)
chr8 (85-122)||(18676847-18676884)
chr8 (62-117)||(19490987-19491038)
chr8 (85-122)||(40213995-40214032)
chr8 (85-122)||(43638954-43638991)
chr8 (5-75)||(16206465-16206535)
chr8 (62-122)||(23192706-23192764)
chr8 (5-122)||(43644073-43644185)
chr8 (5-75)||(15336934-15337003)
chr8 (5-75)||(15425999-15426068)
chr8 (5-75)||(15517303-15517372)
chr8 (85-123)||(40002374-40002412)
chr8 (85-122)||(7019247-7019284)
chr8 (56-122)||(16188462-16188523)
chr8 (56-122)||(19957235-19957299)
chr8 (85-122)||(22212192-22212229)
[»] chr2 (44 HSPs)
chr2 (5-122)||(16494541-16494655)
chr2 (5-122)||(28551712-28551825)
chr2 (5-123)||(22188898-22189014)
chr2 (49-122)||(31328808-31328878)
chr2 (49-122)||(31335529-31335599)
chr2 (11-122)||(22782429-22782536)
chr2 (5-123)||(24851463-24851578)
chr2 (5-122)||(28702015-28702129)
chr2 (5-122)||(40780504-40780618)
chr2 (5-122)||(45087788-45087902)
chr2 (5-122)||(1587825-1587938)
chr2 (5-123)||(22455750-22455866)
chr2 (62-122)||(22797604-22797661)
chr2 (5-122)||(6391861-6391975)
chr2 (11-122)||(22786453-22786562)
chr2 (5-122)||(39038431-39038545)
chr2 (12-122)||(44839629-44839734)
chr2 (56-122)||(27294685-27294749)
chr2 (60-122)||(19539647-19539706)
chr2 (5-122)||(23185123-23185233)
chr2 (5-122)||(23596386-23596496)
chr2 (56-120)||(20569591-20569652)
chr2 (12-120)||(31968574-31968677)
chr2 (85-122)||(1041528-1041565)
chr2 (85-122)||(24450319-24450356)
chr2 (56-119)||(25828352-25828412)
chr2 (85-122)||(28732716-28732753)
chr2 (85-122)||(38040814-38040851)
chr2 (62-120)||(16735817-16735872)
chr2 (56-122)||(17964145-17964208)
chr2 (62-122)||(14794631-14794689)
chr2 (6-122)||(40330984-40331096)
chr2 (85-123)||(22682641-22682679)
chr2 (5-82)||(23234185-23234262)
chr2 (5-75)||(34322720-34322789)
chr2 (85-125)||(22763026-22763067)
chr2 (56-122)||(24376312-24376376)
chr2 (56-122)||(24575226-24575290)
chr2 (85-125)||(30794184-30794225)
chr2 (56-122)||(38780591-38780654)
chr2 (85-122)||(41122546-41122583)
chr2 (85-124)||(20319524-20319564)
chr2 (85-124)||(26866448-26866488)
chr2 (94-122)||(38630927-38630955)
[»] scaffold0275 (1 HSPs)
scaffold0275 (5-122)||(23824-23937)
[»] chr7 (63 HSPs)
chr7 (5-123)||(19340098-19340214)
chr7 (12-122)||(48806736-48806846)
chr7 (15-124)||(1292245-1292351)
chr7 (5-122)||(21382278-21382391)
chr7 (5-122)||(4493739-4493853)
chr7 (12-122)||(24795563-24795676)
chr7 (5-123)||(32265559-32265674)
chr7 (5-122)||(15705343-15705458)
chr7 (5-124)||(8182151-8182265)
chr7 (5-122)||(14186880-14186995)
chr7 (11-122)||(48063666-48063772)
chr7 (5-122)||(11792065-11792179)
chr7 (12-124)||(16557466-16557575)
chr7 (12-124)||(16608087-16608196)
chr7 (5-122)||(13138774-13138889)
chr7 (5-125)||(22580103-22580221)
chr7 (5-122)||(33604099-33604213)
chr7 (2-82)||(19711857-19711939)
chr7 (5-126)||(21691613-21691733)
chr7 (5-75)||(27870957-27871026)
chr7 (5-123)||(13034702-13034819)
chr7 (5-122)||(2499223-2499337)
chr7 (5-122)||(9710683-9710797)
chr7 (56-122)||(10884070-10884133)
chr7 (5-79)||(13473336-13473410)
chr7 (85-123)||(1559969-1560007)
chr7 (85-123)||(6045156-6045194)
chr7 (5-112)||(15574457-15574561)
chr7 (85-122)||(4433466-4433503)
chr7 (85-122)||(13259369-13259406)
chr7 (5-99)||(13879361-13879452)
chr7 (85-122)||(14746545-14746582)
chr7 (5-99)||(16546186-16546277)
chr7 (5-99)||(16619385-16619476)
chr7 (85-122)||(18440584-18440621)
chr7 (85-130)||(19237985-19238030)
chr7 (85-122)||(21284300-21284337)
chr7 (85-122)||(24883269-24883306)
chr7 (28-122)||(33420949-33421040)
chr7 (56-122)||(39285439-39285503)
chr7 (56-122)||(12367657-12367720)
chr7 (56-122)||(13027851-13027914)
chr7 (56-122)||(13902553-13902616)
chr7 (2-118)||(16315383-16315497)
chr7 (5-122)||(33692571-33692686)
chr7 (62-122)||(12223314-12223372)
chr7 (85-120)||(13261601-13261636)
chr7 (5-75)||(28623202-28623272)
chr7 (5-124)||(4820678-4820794)
chr7 (85-123)||(9802128-9802166)
chr7 (7-41)||(16155591-16155625)
chr7 (5-122)||(23280824-23280941)
chr7 (5-42)||(4832173-4832210)
chr7 (5-42)||(15087825-15087862)
chr7 (85-122)||(16033134-16033171)
chr7 (63-118)||(23125160-23125212)
chr7 (56-122)||(30025128-30025192)
chr7 (85-122)||(38594555-38594592)
chr7 (49-122)||(330846-330916)
chr7 (63-121)||(9802280-9802334)
chr7 (2-99)||(13731522-13731616)
chr7 (5-41)||(16310804-16310840)
chr7 (94-122)||(31117407-31117435)
[»] chr1 (44 HSPs)
chr1 (5-123)||(21983792-21983908)
chr1 (5-126)||(1577040-1577158)
chr1 (5-122)||(7308986-7309099)
chr1 (5-124)||(22153019-22153135)
chr1 (5-122)||(42283840-42283952)
chr1 (5-122)||(44824523-44824638)
chr1 (5-124)||(48571022-48571137)
chr1 (5-123)||(32786708-32786823)
chr1 (5-97)||(21135927-21136016)
chr1 (7-122)||(29214995-29215107)
chr1 (55-122)||(12625366-12625430)
chr1 (12-122)||(46088187-46088294)
chr1 (62-123)||(9345973-9346031)
chr1 (5-122)||(25449357-25449469)
chr1 (5-122)||(30892260-30892374)
chr1 (62-123)||(27857980-27858038)
chr1 (62-122)||(2820096-2820153)
chr1 (56-122)||(20959851-20959911)
chr1 (5-99)||(21205629-21205717)
chr1 (5-99)||(21215444-21215532)
chr1 (85-123)||(23975685-23975723)
chr1 (62-118)||(24218569-24218622)
chr1 (85-122)||(17017778-17017815)
chr1 (85-122)||(19037165-19037202)
chr1 (85-122)||(19171211-19171248)
chr1 (5-74)||(30571443-30571511)
chr1 (85-122)||(39194937-39194974)
chr1 (85-122)||(51657289-51657326)
chr1 (56-122)||(17025821-17025884)
chr1 (5-122)||(10250194-10250302)
chr1 (62-122)||(18517884-18517942)
chr1 (12-122)||(37640208-37640313)
chr1 (5-122)||(23037293-23037409)
chr1 (85-123)||(46181693-46181731)
chr1 (85-122)||(5973087-5973124)
chr1 (5-42)||(14264198-14264235)
chr1 (40-99)||(21121856-21121912)
chr1 (85-122)||(22018513-22018550)
chr1 (85-122)||(22465659-22465696)
chr1 (94-127)||(23926227-23926260)
chr1 (5-42)||(38281635-38281672)
chr1 (85-124)||(13223380-13223420)
chr1 (49-99)||(19214828-19214875)
chr1 (62-120)||(25398671-25398725)
[»] chr6 (51 HSPs)
chr6 (12-123)||(26588793-26588903)
chr6 (5-117)||(19066854-19066964)
chr6 (5-123)||(16332923-16333038)
chr6 (5-123)||(17317331-17317442)
chr6 (5-122)||(10631331-10631446)
chr6 (5-122)||(21234350-21234465)
chr6 (5-126)||(14101284-14101402)
chr6 (5-99)||(18912632-18912723)
chr6 (5-122)||(32543458-32543572)
chr6 (5-122)||(19687928-19688042)
chr6 (56-125)||(15301410-15301476)
chr6 (5-124)||(21624284-21624401)
chr6 (5-122)||(17380757-17380872)
chr6 (5-122)||(13435080-13435194)
chr6 (5-122)||(19833829-19833942)
chr6 (62-122)||(15551235-15551292)
chr6 (5-122)||(15532470-15532585)
chr6 (5-122)||(21617450-21617562)
chr6 (5-124)||(17304106-17304224)
chr6 (5-122)||(22077211-22077328)
chr6 (5-123)||(22801338-22801452)
chr6 (85-124)||(30451904-30451943)
chr6 (85-124)||(32756754-32756793)
chr6 (5-124)||(9717018-9717135)
chr6 (5-120)||(16528511-16528624)
chr6 (85-122)||(7752044-7752081)
chr6 (85-122)||(12352932-12352969)
chr6 (85-122)||(16124339-16124376)
chr6 (85-122)||(19453473-19453510)
chr6 (85-122)||(28252369-28252406)
chr6 (11-122)||(33353093-33353199)
chr6 (85-122)||(33866498-33866535)
chr6 (56-122)||(19624971-19625034)
chr6 (86-122)||(22385963-22385999)
chr6 (5-122)||(3680299-3680411)
chr6 (2-122)||(13601362-13601479)
chr6 (85-123)||(20634878-20634917)
chr6 (5-122)||(16876107-16876217)
chr6 (85-122)||(19085327-19085364)
chr6 (85-122)||(19875067-19875104)
chr6 (5-42)||(20113473-20113510)
chr6 (5-42)||(20731546-20731583)
chr6 (85-122)||(21034236-21034273)
chr6 (56-122)||(25593269-25593329)
chr6 (85-122)||(31930802-31930839)
chr6 (85-124)||(11021310-11021350)
chr6 (5-41)||(18434783-18434819)
chr6 (85-124)||(25583262-25583302)
chr6 (56-125)||(29537812-29537879)
chr6 (85-124)||(31571767-31571807)
chr6 (66-120)||(32335030-32335081)
[»] chr3 (67 HSPs)
chr3 (5-122)||(40850174-40850289)
chr3 (5-118)||(21639128-21639237)
chr3 (5-122)||(30055022-30055138)
chr3 (5-122)||(1241921-1242035)
chr3 (5-122)||(46797241-46797354)
chr3 (5-122)||(12727082-12727196)
chr3 (5-122)||(14954607-14954721)
chr3 (5-122)||(49554356-49554470)
chr3 (11-122)||(49669338-49669446)
chr3 (8-122)||(31302547-31302657)
chr3 (11-123)||(2025292-2025397)
chr3 (5-122)||(6089925-6090039)
chr3 (40-122)||(22465361-22465439)
chr3 (5-122)||(29854607-29854721)
chr3 (56-122)||(28581292-28581355)
chr3 (2-122)||(19889782-19889899)
chr3 (5-122)||(40799085-40799201)
chr3 (11-77)||(5212805-5212870)
chr3 (85-131)||(19888148-19888194)
chr3 (11-122)||(21640035-21640143)
chr3 (5-122)||(22804867-22804980)
chr3 (5-122)||(50299431-50299549)
chr3 (5-122)||(14968561-14968680)
chr3 (5-122)||(29952283-29952400)
chr3 (5-122)||(30001437-30001554)
chr3 (5-122)||(52282991-52283106)
chr3 (49-123)||(3237890-3237961)
chr3 (56-122)||(15902393-15902455)
chr3 (85-125)||(17960802-17960842)
chr3 (5-98)||(20628308-20628398)
chr3 (56-122)||(23539122-23539185)
chr3 (57-122)||(12963984-12964046)
chr3 (7-122)||(13823266-13823379)
chr3 (85-123)||(17910800-17910838)
chr3 (85-123)||(28165379-28165417)
chr3 (85-122)||(4433164-4433201)
chr3 (85-122)||(15663532-15663569)
chr3 (56-122)||(17667566-17667630)
chr3 (56-123)||(19250285-19250349)
chr3 (85-122)||(21735576-21735613)
chr3 (85-122)||(22150404-22150441)
chr3 (85-122)||(41044900-41044937)
chr3 (85-121)||(2560383-2560419)
chr3 (56-122)||(11189191-11189253)
chr3 (57-122)||(12967511-12967574)
chr3 (5-122)||(14393841-14393956)
chr3 (5-122)||(19885924-19886038)
chr3 (56-122)||(52919622-52919684)
chr3 (85-123)||(12410636-12410675)
chr3 (85-124)||(24707352-24707391)
chr3 (85-127)||(9994687-9994729)
chr3 (66-122)||(22770761-22770814)
chr3 (40-99)||(1728887-1728943)
chr3 (5-42)||(2782760-2782797)
chr3 (5-42)||(2783150-2783187)
chr3 (89-122)||(4403677-4403710)
chr3 (56-122)||(8875022-8875086)
chr3 (85-122)||(13601637-13601674)
chr3 (85-118)||(16076336-16076369)
chr3 (5-42)||(24776358-24776395)
chr3 (85-122)||(33582415-33582452)
chr3 (5-42)||(47206937-47206974)
chr3 (85-122)||(53057648-53057685)
chr3 (85-124)||(13200043-13200083)
chr3 (5-41)||(25399101-25399137)
chr3 (62-120)||(27849428-27849483)
chr3 (85-124)||(38194121-38194161)
[»] chr4 (53 HSPs)
chr4 (42-122)||(40859900-40859977)
chr4 (12-122)||(38513105-38513215)
chr4 (5-118)||(3500455-3500565)
chr4 (5-122)||(17399482-17399596)
chr4 (2-122)||(19611171-19611288)
chr4 (5-122)||(3106218-3106329)
chr4 (12-122)||(20976646-20976756)
chr4 (5-126)||(54679050-54679168)
chr4 (5-122)||(37436332-37436445)
chr4 (5-120)||(56033722-56033835)
chr4 (12-122)||(9752351-9752464)
chr4 (5-122)||(14605707-14605823)
chr4 (5-123)||(29120559-29120675)
chr4 (5-122)||(22676362-22676475)
chr4 (5-122)||(24628699-24628814)
chr4 (5-99)||(6516701-6516791)
chr4 (5-122)||(13576950-13577064)
chr4 (12-68)||(39420515-39420571)
chr4 (85-124)||(31267590-31267629)
chr4 (7-122)||(12599948-12600060)
chr4 (59-119)||(15134915-15134972)
chr4 (5-75)||(16852710-16852779)
chr4 (62-122)||(18773282-18773339)
chr4 (85-123)||(33377562-33377600)
chr4 (85-122)||(5872796-5872833)
chr4 (85-122)||(11514459-11514496)
chr4 (85-122)||(14154869-14154906)
chr4 (85-122)||(14836902-14836939)
chr4 (5-122)||(14905127-14905242)
chr4 (56-122)||(16631631-16631695)
chr4 (85-122)||(19570440-19570477)
chr4 (7-122)||(41115618-41115728)
chr4 (5-122)||(55379504-55379619)
chr4 (5-122)||(3792527-3792640)
chr4 (5-76)||(17246846-17246917)
chr4 (12-68)||(17701566-17701622)
chr4 (5-99)||(19883909-19884000)
chr4 (62-124)||(24618885-24618944)
chr4 (59-116)||(6640891-6640945)
chr4 (56-122)||(10072079-10072146)
chr4 (85-120)||(13026985-13027020)
chr4 (62-123)||(17527237-17527295)
chr4 (85-124)||(20571887-20571926)
chr4 (85-124)||(49002779-49002818)
chr4 (62-122)||(13890030-13890087)
chr4 (85-122)||(14711619-14711657)
chr4 (85-123)||(21810758-21810796)
chr4 (85-127)||(22089473-22089514)
chr4 (85-122)||(15560463-15560500)
chr4 (62-124)||(16325353-16325413)
chr4 (85-122)||(21546542-21546579)
chr4 (85-122)||(25656555-25656592)
chr4 (89-122)||(56533866-56533899)
[»] scaffold0045 (1 HSPs)
scaffold0045 (5-127)||(88398-88518)
[»] scaffold0471 (1 HSPs)
scaffold0471 (2-123)||(2650-2767)
[»] scaffold0439 (1 HSPs)
scaffold0439 (5-122)||(7509-7623)
[»] scaffold0069 (1 HSPs)
scaffold0069 (5-99)||(6067-6158)
[»] scaffold0056 (2 HSPs)
scaffold0056 (5-122)||(26449-26564)
scaffold0056 (5-82)||(35543-35620)
[»] scaffold0205 (1 HSPs)
scaffold0205 (5-124)||(752-868)
[»] scaffold0352 (1 HSPs)
scaffold0352 (5-122)||(1617-1735)
[»] scaffold0249 (1 HSPs)
scaffold0249 (5-122)||(18559-18672)
[»] scaffold0004 (1 HSPs)
scaffold0004 (5-122)||(210603-210715)
[»] scaffold0035 (2 HSPs)
scaffold0035 (5-122)||(110392-110509)
scaffold0035 (7-120)||(20267-20376)
[»] scaffold0247 (1 HSPs)
scaffold0247 (5-122)||(16514-16627)
[»] scaffold0210 (1 HSPs)
scaffold0210 (5-122)||(817-932)
[»] scaffold0011 (3 HSPs)
scaffold0011 (6-122)||(145249-145363)
scaffold0011 (6-99)||(66206-66295)
scaffold0011 (63-122)||(250845-250901)
[»] scaffold0859 (1 HSPs)
scaffold0859 (5-124)||(2164-2280)
[»] scaffold0081 (1 HSPs)
scaffold0081 (5-122)||(13191-13303)
[»] scaffold0217 (1 HSPs)
scaffold0217 (5-124)||(22956-23071)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-122)||(211555-211671)
[»] scaffold0479 (1 HSPs)
scaffold0479 (5-122)||(9158-9277)
[»] scaffold0280 (1 HSPs)
scaffold0280 (5-122)||(3483-3598)
[»] scaffold0084 (2 HSPs)
scaffold0084 (56-122)||(31786-31849)
scaffold0084 (56-122)||(48512-48576)
[»] scaffold0022 (2 HSPs)
scaffold0022 (56-122)||(36626-36689)
scaffold0022 (56-122)||(134686-134749)
[»] scaffold0315 (1 HSPs)
scaffold0315 (9-122)||(7866-7976)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-121)||(102752-102866)
[»] scaffold0267 (1 HSPs)
scaffold0267 (85-124)||(7191-7230)
[»] scaffold0622 (1 HSPs)
scaffold0622 (85-123)||(1862-1900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (64-120)||(63534-63587)
[»] scaffold1539 (1 HSPs)
scaffold1539 (85-122)||(1558-1595)
[»] scaffold0752 (1 HSPs)
scaffold0752 (85-122)||(614-651)
[»] scaffold0738 (1 HSPs)
scaffold0738 (85-122)||(5636-5673)
[»] scaffold0391 (1 HSPs)
scaffold0391 (85-122)||(3054-3091)
[»] scaffold0116 (1 HSPs)
scaffold0116 (85-122)||(21812-21849)
[»] scaffold0068 (1 HSPs)
scaffold0068 (85-122)||(11440-11477)
[»] scaffold0047 (1 HSPs)
scaffold0047 (85-122)||(33736-33773)
[»] scaffold0038 (1 HSPs)
scaffold0038 (85-122)||(52569-52606)
[»] scaffold0018 (1 HSPs)
scaffold0018 (56-122)||(50480-50544)
[»] scaffold0002 (2 HSPs)
scaffold0002 (85-122)||(476168-476205)
scaffold0002 (85-122)||(482688-482725)
[»] scaffold1657 (1 HSPs)
scaffold1657 (56-122)||(1014-1077)
[»] scaffold0026 (1 HSPs)
scaffold0026 (56-122)||(7076-7139)
[»] scaffold0364 (1 HSPs)
scaffold0364 (85-120)||(5372-5407)
[»] scaffold0028 (1 HSPs)
scaffold0028 (85-124)||(13963-14002)
[»] scaffold0037 (2 HSPs)
scaffold0037 (62-122)||(87092-87149)
scaffold0037 (85-122)||(76448-76485)
[»] scaffold0009 (2 HSPs)
scaffold0009 (5-82)||(83594-83672)
scaffold0009 (56-122)||(83494-83556)
[»] scaffold1747 (1 HSPs)
scaffold1747 (56-122)||(517-581)
[»] scaffold1745 (1 HSPs)
scaffold1745 (56-122)||(830-894)
[»] scaffold0607 (1 HSPs)
scaffold0607 (5-122)||(5326-5443)
[»] scaffold0547 (1 HSPs)
scaffold0547 (85-122)||(123-160)
[»] scaffold0330 (1 HSPs)
scaffold0330 (56-122)||(522-586)
[»] scaffold0311 (1 HSPs)
scaffold0311 (85-122)||(19320-19357)
[»] scaffold0073 (1 HSPs)
scaffold0073 (85-122)||(57747-57784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (85-122)||(112800-112837)
[»] scaffold0072 (1 HSPs)
scaffold0072 (85-124)||(37569-37609)


Alignment Details
Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 35932834 - 35932950
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacc-ccccatct 103  Q
    ||||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||   ||||||||||| |||| |||    
T  35932834 acatctcttcagaagtagaactctatctgcttctgaactgcttatttcagataggagaaaaagaagaaaaagctaac---acaattcaacctccccttct 35932930  T
Q  104 tgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||    
T  35932931 tgtgtttttctcaccttcag 35932950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 3246291 - 3246403
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | |||||||||||||||||  | |||||| ||||||||||||||||||||   |||   ||||||||||||||| ||||    
T  3246291 acatctcttcagaagtagaactctatctgcttctgatctg--tatttcagttaggagaaaaagaagaaaaagaaaac---acaattcaaccccccttctt 3246385  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  3246386 gtgtttttctcaccttca 3246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 31146431 - 31146521
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccc 98  Q
    ||||| ||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  31146431 acatctctttagaagtagaactctatctgcttctgaactgcttgtttcagataggagaaaaagaagaaaaagctaac---acaattcaaccccc 31146521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 35987059 - 35987172
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag---aagaaaaaactaacagtacaattcaa---ccccccatcttg 105  Q
    ||||||||||||| | ||||||||||||| ||||||||||||| ||||||||||||   |||||||| |||||   | |||||||   |||||| |||||    
T  35987059 ttcagaagtagaactctatctgcttctgaactgcttgtttcagttaggagaaaaagattaagaaaaagctaac---ataattcaacccccccccctcttg 35987155  T
Q  106 tgtttttctcaccttca 122  Q
    |||||||||||||||||    
T  35987156 tgtttttctcaccttca 35987172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 21100578 - 21100692
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||| |||| ||| | ||||||||||||||| |  | |||||| | ||||||||| ||||||||||||||||   |||||||||||||| |||    
T  21100578 acatcacttcaaaagtggaactctatctgcttctgatcagtgt-tttcagcttaggagaaaatgaagaaaaaactaaca---caattcaaccccccttct 21100673  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||| ||||||||||||||    
T  21100674 tgtgcttttctcaccttca 21100692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 30116702 - 30116816
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-ct 103  Q
    ||||| ||||||||| |||| | |||||||||||||||||  | |||||| |||||||||||||||||||| | |||||   |||| |||||||| | ||    
T  30116702 acatctcttcagaagcagaactctatctgcttctgatctgtat-tttcagttaggagaaaaagaagaaaaagccaacag---aatttaacccccccttct 30116797  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  30116798 tgtgtttttctcaccttca 30116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 9399440 - 9399557
Alignment:
Q  4 gacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccc-cccat 101  Q
    ||||||||||||||| ||||||| ||||||||||||||  |  | |||||| | ||||||||| |||||||||||||||   |||||||||||| ||  |    
T  9399440 gacatcacttcagaaatagaattctatctgcttctgattagtgt-tttcagcttaggagaaaatgaagaaaaaactaac---acaattcaaccctccttt 9399535  T
Q  102 cttgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||||    
T  9399536 cttgtgtttttctcaccttcag 9399557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 21199846 - 21199953
Alignment:
Q  10 acttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtt 109  Q
    ||||||||||| ||| | ||||||||||||||| | |   ||||| |||||||||| ||||||||| ||||||   |||||||||||||| |||||||||    
T  21199846 acttcagaagttgaactctatctgcttctgatcag-tgacttcag-taggagaaaacgaagaaaaagctaaca---caattcaaccccccttcttgtgtt 21199940  T
Q  110 tttctcaccttca 122  Q
    |||||||||||||    
T  21199941 tttctcaccttca 21199953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 28138907 - 28138789
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaacta--acagtacaattcaaccccccatc 102  Q
    ||||| |||||||||||||| | |||||| |||||||||| |  |||||| ||||||||||||||||||||   |  ||| | |||| | ||||||| ||    
T  28138907 acatctcttcagaagtagaactctatctgtttctgatctg-tattttcagttaggagaaaaagaagaaaaagtcaacacaattcaatcccaccccccttc 28138809  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  28138808 ttgtgtttttctcaccttca 28138789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 31487466 - 31487403
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||||| ||||   |||||||||||||| ||||||||||||||||||||||    
T  31487466 taggagaaaacgaagaaaaaaccaaca---caattcaaccccccttcttgtgtttttctcaccttca 31487403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 37395476 - 37395362
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||| ||||||| ||||||||||| ||| |  | |||||| | ||||||| |||||||||||   ||||   |||||||||||||| |||    
T  37395476 acatcacttcagaaatagaattctatctgcttctaatcagtgt-tttcagcttaggagaagaagaagaaaaagtaaaca---caattcaaccccccttct 37395381  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  37395380 tgtgtttttctcaccttca 37395362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 10848073 - 10848004
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaaca 82  Q
    ||||||||||||| | ||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||    
T  10848073 ttcagaagtagaactctatctgcttctgaactgcat-tttcagttaggagaaaaagaagaaaaacctaaca 10848004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 15516270 - 15516176
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgt-ttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtt 109  Q
    |||||||||||||| | |||||||||||||| ||  ||| ||||| |||||||||||||||||||| | |||   ||||||||||||||| |||||||||    
T  15516270 cttcagaagtagaactctatctgcttctgatatg--tgtcttcagttaggagaaaaagaagaaaaagccaac---acaattcaaccccccttcttgtgtt 15516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 6498623 - 6498511
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||| ||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||||||||  |||    
T  6498623 acatcacttcagaagtagaactctatctgcttctaatcagtgt-tttcagcttaggagaaaacgaagaaaaagctaaca---caattcaaccccc--tct 6498530  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||| ||||||||||    
T  6498529 tgtgttttactcaccttca 6498511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 7746524 - 7746639
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| ||||||||| | |||   ||||||||||||||| | |    
T  7746524 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaagcaaac---acaattcaaccccccttat 7746619  T
Q  104 tgtg-tttttctcaccttca 122  Q
    |||| |||||||||||||||    
T  7746620 tgtgttttttctcaccttca 7746639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 25097871 - 25097981
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||  ||| | ||||||||||||||| | || |||||| |||||||||| ||||||||| | ||||    ||||||||| ||| ||||    
T  25097871 acatcacttcagaagctgaaatctatctgcttctgatcag-ttatttcag-taggagaaaacgaagaaaaagcaaacat---aattcaaccacccttctt 25097965  T
Q  105 gtgtttttctcacctt 120  Q
    ||||||||||||||||    
T  25097966 gtgtttttctcacctt 25097981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 25156963 - 25157073
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||  ||| | ||||||||||||||| | || |||||| |||||||||| ||||||||| | ||||    ||||||||| ||| ||||    
T  25156963 acatcacttcagaagctgaaatctatctgcttctgatcag-ttatttcag-taggagaaaacgaagaaaaagcaaacat---aattcaaccacccttctt 25157057  T
Q  105 gtgtttttctcacctt 120  Q
    ||||||||||||||||    
T  25157058 gtgtttttctcacctt 25157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 22000906 - 22000969
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   ||| |||||||||| ||||||||||||||||||||||    
T  22000906 taggagaaaacgaagaaaaagctaaca---caactcaaccccccttcttgtgtttttctcaccttca 22000969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 27276602 - 27276657
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||||||||||||    
T  27276602 aaaaagaagaaaaatctaaca---caattcaaccccccttcttgtgtttttctcacctt 27276657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 23407480 - 23407590
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttt 111  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||||| || ||||||||||  | | ||  || | |||||||||||||| | |||||||||||    
T  23407480 ttcagaagtggaattctatctgcttatgaactgcttgtttcagttaagagaaaaagataagacaaagaa-aatacaattcaacccctcttcttgtgtttt 23407578  T
Q  112 tctcaccttcag 123  Q
     || ||||||||    
T  23407579 cctgaccttcag 23407590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 21076011 - 21076125
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtt-tcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatc 102  Q
    |||||||||||||||||||| |  |||||||||||||| |  |||| |||| | ||||||||| ||||||||| ||||||    |||||||||| || ||    
T  21076011 acatcacttcagaagtagaactcaatctgcttctgatcag--tgttatcagcttaggagaaaacgaagaaaaagctaacat---aattcaaccctccttc 21076105  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||    
T  21076106 ttgtgtttttctcacattca 21076125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 26764779 - 26764710
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    ||||| |||||||||||||| | ||||||||||||||||  |  |||||| ||||||||||||||||||||    
T  26764779 acatctcttcagaagtagaactctatctgcttctgatct-atgttttcagttaggagaaaaagaagaaaaa 26764710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 31144222 - 31144260
Alignment:
Q  84 tacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31144222 tacaattcaaccccccttcttgtgtttttctcaccttca 31144260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 31589879 - 31589936
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   |||||||||||||| | ||||||||||||||||||||    
T  31589879 aaaaagaagaaaaagctaaca---caattcaaccccccttattgtgtttttctcaccttca 31589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 33021882 - 33021844
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33021882 acaattcaaccccccttcttgtgtttttctcaccttcag 33021844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 13533213 - 13533176
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13533213 acaattcaaccccccttcttgtgtttttctcaccttca 13533176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17456658 - 17456621
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17456658 acaattcaaccccccttcttgtgtttttctcaccttca 17456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 21702470 - 21702433
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21702470 acaattcaaccccccttcttgtgtttttctcaccttca 21702433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 23477608 - 23477571
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  23477608 acaattcaaccccccttcttgtgtttttctcaccttca 23477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 30742248 - 30742211
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30742248 acatcacttcagaagtagaactatatctgcttctgatc 30742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 40033686 - 40033723
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40033686 acaattcaaccccccttcttgtgtttttctcaccttca 40033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 26120704 - 26120760
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   |||||||||||||  ||||||||||||||||||||||    
T  26120704 aaaaagaagaaaaagctaaca---caattcaaccccct-tcttgtgtttttctcaccttca 26120760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 32753293 - 32753255
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  32753293 acaattcaaccccccttcttatgtttttctcaccttcag 32753255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 39799697 - 39799753
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||   ||||||||| |||  ||||||||||||||||||||||    
T  39799697 aaaaagaagaaaaaactaaca---caattcaactccct-tcttgtgtttttctcaccttca 39799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 2157174 - 2157211
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  2157174 acaattcaacctcccttcttgtgtttttctcaccttca 2157211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 13546355 - 13546392
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  13546355 acatcacttcagaagtagaactctatctgcttctgatc 13546392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17446042 - 17446005
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  17446042 acaattcaacctcccttcttgtgtttttctcaccttca 17446005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 23407360 - 23407401
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcagaa 125  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  23407360 acaattcaacccccccttcttgtgtttttctcaccttcagaa 23407401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 23880321 - 23880284
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  23880321 acatcacttcagaagtagaactctatctgcttctgatc 23880284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 42242848 - 42242815
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcacc 118  Q
    ||||||||||||||| ||||||||||||||||||    
T  42242848 acaattcaaccccccttcttgtgtttttctcacc 42242815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 90261 - 90375
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||| |||| |||| | ||| ||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||||| |   |||    
T  90261 acatcacttcggaagcagaactctatttgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaagctaaca---caattcaacctcat-tct 90356  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  90357 tgtgtttttctcaccttca 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 11993197 - 11993107
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||||||||||||| |||| | |||||||| |||||| | |  ||| || |||||||||||||||||||| | |||   |||||||||||||||    
T  11993197 acatcacttcagaagcagaactctatctgctcctgatcag-tgtttttagttaggagaaaaagaagaaaaagcaaac---acaattcaacccccc 11993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 20625680 - 20625720
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  20625680 acaattcaacccccccttcttgtgtttttctcaccttcaga 20625720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 11510 - 11396
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||| ||| | ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||   ||||||||||||||| ||||    
T  11510 acatctcttcagaagtggaactttatctgcttctgaactgcttttttcagttaggagaaaaagaagaaaaaactaac---acaattcaaccccccttctt 11414  T
Q  105 gtgtttttctcaccttca 122  Q
    |||||||||||| |||||    
T  11413 gtgtttttctcaacttca 11396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 13431465 - 13431579
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||| | || |||||||||||||| |||||||||||||||| |||||   ||||||||||||||| ||||    
T  13431465 acatctcttcagaagtagaactctatctgcttctaaactacttgtttcagatagaagaaaaagaagaaaaagctaac---acaattcaaccccccttctt 13431561  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  13431562 gtgtttttctcaccttca 13431579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 1744499 - 1744381
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| | ||||||||  ||||   ||||||||||| ||| ||||    
T  1744499 acatctcttcagaagtagaattctatctgcttctgatctgcctgtttcagataggagaaataaaagaaaaagttaac---acaattcaacctcccttctt 1744403  T
Q  105 gtgtttttctcaccttcagaaa 126  Q
    | ||||||||||| ||||||||    
T  1744402 gcgtttttctcacattcagaaa 1744381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 45292150 - 45292033
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag--aagaaaaaactaacagtacaattcaac-cccccat 101  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||  |||||||| |||||   |||||||||| ||||| |    
T  45292150 acatctcttcagaagtagaactatatctgcttctgaactgcttgtttcagttaggagaaaaagaaaagaaaaagctaac---acaattcaactccccctt 45292054  T
Q  102 cttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||    
T  45292053 cttgtgtttttctcaccttca 45292033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 43773417 - 43773308
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag--aagaaaaaactaacagtacaattcaaccccccatcttgtgtt 109  Q
    ||||||||||||| | ||||||||||| | ||||||||||||| ||||||||||||  |||||||| |||||   ||||||||||||||| |||||||||    
T  43773417 ttcagaagtagaactttatctgcttctaaactgcttgtttcagttaggagaaaaagaaaagaaaaagctaac---acaattcaaccccccttcttgtgtt 43773321  T
Q  110 tttctcaccttca 122  Q
    |||||||||||||    
T  43773320 tttctcaccttca 43773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 17541333 - 17541450
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca 100  Q
    |||| ||||||||||||| |||| ||||| ||||||||||| |  | |||||| | ||||||||| ||||||||||||||||   ||||||||||||||     
T  17541333 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgt-tttcagcttaggagaaaatgaagaaaaaactaaca---caattcaacccccct 17541428  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||    
T  17541429 tcttgtgtttttctcaccttca 17541450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 6407054 - 6406955
Alignment:
Q  15 agaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttct 114  Q
    |||||||||| | |||||||||||||||||  | |||||| |||||||||||||||||||||| ||||   |||||||||||||  ||||||||||||||    
T  6407054 agaagtagaactctatctgcttctgatctgtat-tttcagttaggagaaaaagaagaaaaaaccaaca---caattcaacccccattcttgtgtttttct 6406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 14990935 - 14991049
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc-atct 103  Q
    ||||| |||||||||||||| | ||| ||||||||| |||  | |||||| |||||||||||||||||||| | ||||   |||||||||||||| ||||    
T  14990935 acatctcttcagaagtagaactctatatgcttctgacctgtat-tttcagttaggagaaaaagaagaaaaagccaaca---caattcaaccccccgatct 14991030  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  14991031 tgtgtttttctcaccttca 14991049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 36104651 - 36104533
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccat 101  Q
    |||||||| |||||||||||||| |  |||||||||||||||| |  |||||| |||||||||| ||||||||| | |||   ||||||||||||||| |    
T  36104651 tggacatctcttcagaagtagaactcaatctgcttctgatctg-tgttttcagttaggagaaaatgaagaaaaagccaac---acaattcaacccccctt 36104556  T
Q  102 cttgtg-tttttctcaccttcag 123  Q
    |||||| ||||||||||||||||    
T  36104555 cttgtgttttttctcaccttcag 36104533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 45539331 - 45539445
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | |||||||||||||||||||   ||||   |||||||||||||| |||    
T  45539331 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagaaaaca---caattcaaccccccttct 45539426  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  45539427 tgtgtttttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 17007617 - 17007500
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca 100  Q
    |||| ||||||||||||| |||| ||||| ||||||||||| |  | |||||| | ||||||||| ||||||||||| ||||   ||||||||||||||     
T  17007617 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaaacaaaca---caattcaacccccct 17007522  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||    
T  17007521 tcttgtgtttttctcaccttca 17007500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 22673080 - 22672968
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||| |||||||| | |||   ||||||||| ||||| ||||    
T  22673080 acatctcttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaaacaagaaaaagccaac---acaattcaa-cccccttctt 22672986  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  22672985 gtgtttttctcaccttca 22672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 30422277 - 30422392
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||| ||||||||||| |  | |||||| | ||||||||||||||||||| | ||||   |||||||||||| | |||    
T  30422277 acatcacttcagaagtagaactctatttgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagcaaaca---caattcaacccctcttct 30422372  T
Q  104 tgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||    
T  30422373 tgtgtttttctcaccttcag 30422392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 33561068 - 33561183
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag---aagaaaaaactaacagtacaattcaacccccca-----tct 103  Q
    ||||||||||||| | ||||||||||||| ||||||||||||| |||||||| |||   |||||||| | |||   ||||||||||||||||     |||    
T  33561068 ttcagaagtagaactctatctgcttctgaactgcttgtttcagttaggagaagaagatcaagaaaaagcaaac---acaattcaaccccccaccccttct 33561164  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  33561165 tgtgtttttctcaccttca 33561183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 18121980 - 18122094
Alignment:
Q  6 catcacttcagaagtagaattatatctgcttctgatctgcttgtttcagata-ggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||||||||||| | |||||||||||||||    | |||||| || |||||||||||||||||| | ||||   |||||||||||||| ||||    
T  18121980 catcacttcagaagtagaactctatctgcttctgatcaatgt-tttcagctaaggagaaaaagaagaaaaagccaaca---caattcaaccccccttctt 18122075  T
Q  105 gtg-tttttctcaccttca 122  Q
    ||| |||||||||||||||    
T  18122076 gtgttttttctcaccttca 18122094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 40846273 - 40846365
Alignment:
Q  28 tatctgcttctgatctgcttgtttcagataggagaaaaa--gaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||  | |||||| |||||||||||  ||||||||| ||||||   |||||||||||||| |||||| |||||||||||||||    
T  40846273 tatctgcttctgatctgtat-tttcagttaggagaaaaaaagaagaaaaagctaaca---caattcaaccccccttcttgtatttttctcaccttca 40846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 1210604 - 1210661
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  1210604 aaaaagaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttca 1210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 9319876 - 9319760
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatc 102  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  ||| |||||||||| ||||||  |||   ||||||||| |||||| ||    
T  9319876 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttagaagaaaaagaataaaaaatcaac---acaattcaacccccccttc 9319781  T
Q  103 ttgtgtttttctcaccttcag 123  Q
    |||||||||||||||||||||    
T  9319780 ttgtgtttttctcaccttcag 9319760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 25163324 - 25163261
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||||||| |||| |||||||||||||||||    
T  25163324 taggagaaaacgaagaaaaagctaaca---caattcaaccccccttcttatgtttttctcaccttca 25163261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 31445406 - 31445292
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  ||||| ||||| || ||||||| |||   ||||||||||||||  |||    
T  31445406 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggaaaaaaaaaaaaaaaaaccaac---acaattcaacccccattct 31445311  T
Q  104 tgtgtttttctcaccttca 122  Q
    ||||||||| |||||||||    
T  31445310 tgtgtttttgtcaccttca 31445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 17287067 - 17287124
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| | ||||   |||||||||||||| ||||||||||||||||||||||    
T  17287067 aaaaagaagaaaaagccaaca---caattcaaccccccttcttgtgtttttctcaccttca 17287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23264474 - 23264592
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccca--t 101  Q
    |||||||||||||||||||||| ||||| ||||||||| | |  ||||||  |||||||||| ||||||||| | |||   ||||||||||||||||  |    
T  23264474 acatcacttcagaagtagaattctatctacttctgatcag-tgttttcagcttaggagaaaaggaagaaaaagccaac---acaattcaaccccccatgt 23264569  T
Q  102 cttgtg--tttttctcaccttca 122  Q
    ||||||  |||||||||||||||    
T  23264570 cttgtgtttttttctcaccttca 23264592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 16376252 - 16376289
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  16376252 acaattcaaccccccttcttgtgtttttctcaccttca 16376289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18565203 - 18565166
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18565203 acaattcaaccccccttcttgtgtttttctcaccttca 18565166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18676884 - 18676847
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18676884 acaattcaaccccccttcttgtgtttttctcaccttca 18676847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 19491038 - 19490987
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcac 117  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  19491038 aaaaagaagaaaaaactaac---acaattcaacccccc-tcttgtgtttttctcac 19490987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 40213995 - 40214032
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40213995 acaattcaaccccccttcttgtgtttttctcaccttca 40214032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 43638991 - 43638954
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43638991 acaattcaaccccccctcttgtgtttttctcaccttca 43638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 16206535 - 16206465
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaa 75  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  ||||||||||||||||||||    
T  16206535 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaaagaagaaaaa 16206465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 23192706 - 23192764
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccc-cccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||   |||||||||||| ||| ||||||||||||||| ||||||    
T  23192706 aaaaagaagaaaaaactaac---acaattcaacccacccttcttgtgtttttctctccttca 23192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 43644185 - 43644073
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||  ||| | ||||||||||||||| | |   ||||| ||||| |||| ||| ||||| ||||||   |||||||||||||| ||||    
T  43644185 acatcacttcagaagctgaactctatctgcttctgatcag-tgaattcag-taggaaaaaatgaaaaaaaagctaaca---caattcaaccccccttctt 43644091  T
Q  105 gtgtttttctcaccttca 122  Q
     |||||||||||||||||    
T  43644090 atgtttttctcaccttca 43644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15336934 - 15337003
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    ||||||||||||||| |||| | |||||||| |||||| | |  |||||| ||||||||||||||||||||    
T  15336934 acatcacttcagaagcagaactctatctgctcctgatcag-tgatttcagttaggagaaaaagaagaaaaa 15337003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15425999 - 15426068
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    ||||||||||||||| |||| | |||||||| |||||| | |  |||||| ||||||||||||||||||||    
T  15425999 acatcacttcagaagcagaactctatctgctcctgatcag-tgatttcagttaggagaaaaagaagaaaaa 15426068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15517303 - 15517372
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    ||||||||||||||| |||| | |||||||| |||||| | |  |||||| ||||||||||||||||||||    
T  15517303 acatcacttcagaagcagaactctatctgctcctgatcag-tgatttcagttaggagaaaaagaagaaaaa 15517372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 40002412 - 40002374
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  40002412 acaattcaaccccccttcttgtgtttttcccaccttcag 40002374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 7019247 - 7019284
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  7019247 acaattcaaccccccttcttatgtttttctcaccttca 7019284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 16188523 - 16188462
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||| |||||||| |||||||||||   |||||||||||||||  || ||||||||||||||||||    
T  16188523 taggaaaaaaagaataaaaaactaac---acaattcaacccccc--ctggtgtttttctcaccttca 16188462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 19957235 - 19957299
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaacc-ccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||| | |||| ||||||||||||||||||||||    
T  19957235 taggagaaaacgaagaaaaagctaaca---caattcaatctccccttcttgtgtttttctcaccttca 19957299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22212192 - 22212229
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  22212192 acaattcaaccccccttcttatgtttttctcaccttca 22212229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 16494655 - 16494541
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||| |||||    |||||||||||||| ||||    
T  16494655 acatctcttcagaagtagaactctatctgcttctgaattgcttgtttcagataggagaaaaagaagaaaaagctaac---ccaattcaaccccccttctt 16494559  T
Q  105 gtgtttttctcaccttca 122  Q
    |||||||||||| |||||    
T  16494558 gtgtttttctcaacttca 16494541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 28551712 - 28551825
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||||| |||| | |||||| || ||||||||||||||||| ||||||   |||||||||||||| ||||    
T  28551712 acatctcttcagaagtagaactctatctgcttctgaactgcat-tttcagttatgagaaaaagaagaaaaagctaaca---caattcaaccccccttctt 28551807  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  28551808 gtgtttttctcaccttca 28551825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 22188898 - 22189014
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatc 102  Q
    |||||||||||||||||||| ||||||||||||||||| | |  |||||| ||||||||||||||||||||||| |||   ||||||||| |||||  ||    
T  22188898 acatcacttcagaagtagaactatatctgcttctgatcag-tgttttcagcataggagaaaaagaagaaaaaaccaac---acaattcaatcccccgttc 22188993  T
Q  103 ttgtgtttttctcaccttcag 123  Q
    |||||||||||||||||||||    
T  22188994 ttgtgtttttctcaccttcag 22189014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 31328808 - 31328878
Alignment:
Q  49 tttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||||||||| ||||   |||||||||||||| ||||||||||||||||||||||    
T  31328808 tttcagataggagaaaaagaagaaaaaacaaaca---caattcaaccccccttcttgtgtttttctcaccttca 31328878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 31335529 - 31335599
Alignment:
Q  49 tttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||||||||| ||||   |||||||||||||| ||||||||||||||||||||||    
T  31335529 tttcagataggagaaaaagaagaaaaaacaaaca---caattcaaccccccttcttgtgtttttctcaccttca 31335599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 22782429 - 22782536
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgttt 110  Q
    |||||||||||||| | ||||| ||||||| | |||| ||| || |||||||||||||||||||| ||||||   |||||||||||||| ||||||||||    
T  22782429 cttcagaagtagaactttatcttcttctgaacagctttttt-aggtaggagaaaaagaagaaaaagctaaca---caattcaaccccccttcttgtgttt 22782524  T
Q  111 ttctcaccttca 122  Q
    || |||||||||    
T  22782525 ttatcaccttca 22782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 24851463 - 24851578
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||| ||||||||| | ||||   ||||||||||| || |||    
T  24851463 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaagcaaaca---caattcaaccctccttct 24851558  T
Q  104 tgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||    
T  24851559 tgtgtttttctcaccttcag 24851578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 28702015 - 28702129
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||| ||||||||||| |  | |||||| | |||||||||||||||||||   ||||   |||||||||||||| |||    
T  28702015 acatcacttcagaagtagaactctatttgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagaaaaca---caattcaaccccccttct 28702110  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  28702111 tgtgtttttctcaccttca 28702129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 40780618 - 40780504
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||||||| |||| | ||| ||||||||||| |  | |||||| | ||||||||| ||||||||||||||||   ||||||||||| || |||    
T  40780618 acatcacttcagaagcagaactctatttgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaaactaaca---caattcaaccctccttct 40780523  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  40780522 tgtgtttttctcaccttca 40780504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 45087788 - 45087902
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||||||||| || | ||||||||||||||| |  | |||||| | |||||||||||||||||||   ||||   |||||||||||||| |||    
T  45087788 acatcacttcagaagtataaatctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagaaaaca---caattcaaccccccttct 45087883  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  45087884 tgtgtttttctcaccttca 45087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1587825 - 1587938
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | |||||||||||||  ||  | |||||| |||||||||||||||||||| | || |   |||| ||||||||| ||||    
T  1587825 acatctcttcagaagtagaactctatctgcttctgacttgtat-tttcagttaggagaaaaagaagaaaaagccaaga---caatgcaaccccccttctt 1587920  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  1587921 gtgtttttctcaccttca 1587938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 22455750 - 22455866
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-c 102  Q
    |||||||||||||||||||| | ||||||||||||||| |  | ||| || | ||||||||| ||||||||| ||||||   |||||||||||||| | |    
T  22455750 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttgagcttaggagaaaacgaagaaaaagctaaca---caattcaacccccccttc 22455845  T
Q  103 ttgtgtttttctcaccttcag 123  Q
    |||||||||||||||||||||    
T  22455846 ttgtgtttttctcaccttcag 22455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 22797661 - 22797604
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||||    
T  22797661 aaaaagaagaaaaaactaaca---caattcaaccccccttcttgtgtttttctcaccttca 22797604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 6391975 - 6391861
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||| ||||||||||| |  | |||||| | | || | |||||||||||||| ||||   |||||||||||||| |||    
T  6391975 acatcacttcagaagtagaactctatatgcttctgatcagtgt-tttcagcttaagaaagaaagaagaaaaaaccaaca---caattcaaccccccttct 6391880  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  6391879 tgtgtttttctcaccttca 6391861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 22786453 - 22786562
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa--ccccccatcttgtgt 108  Q
    |||||||||||||| | ||||||||| ||| |  ||| |||||| ||||| |||||||||||||| ||||||   ||||||||  |||||| ||||||||    
T  22786453 cttcagaagtagaactctatctgcttatgaacaactt-tttcagctaggataaaaagaagaaaaagctaaca---caattcaaacccccccctcttgtgt 22786548  T
Q  109 ttttctcaccttca 122  Q
    ||||||||||||||    
T  22786549 ttttctcaccttca 22786562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 39038431 - 39038545
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||||||||| || | ||||||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   ||||||||| |||| |||    
T  39038431 acatcacttcagaagtataactctatctgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaagctaaca---caattcaactccccttct 39038526  T
Q  104 tgtgtttttctcaccttca 122  Q
    ||| |||||||||||||||    
T  39038527 tgtttttttctcaccttca 39038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 44839734 - 44839629
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg-ttt 110  Q
    ||||||||||||| | ||||||||||| | |||| | |||||| |||||||||||||||||||| | |||   ||||||||||||||  ||||||| |||    
T  44839734 ttcagaagtagaactctatctgcttctaaactgcat-tttcagttaggagaaaaagaagaaaaatcaaac---acaattcaaccccc--tcttgtgtttt 44839641  T
Q  111 ttctcaccttca 122  Q
    ||||||||||||    
T  44839640 ttctcaccttca 44839629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 27294749 - 27294685
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||||||||||   |||||||||||||| | |||||||||||||||||||||    
T  27294749 taggagaaaacgaagaaaaaactaaca---caattcaacccccccttcttgtgtttttctcaccttca 27294685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 19539706 - 19539647
Alignment:
Q  60 agaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||| ||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  19539706 agaaaatgaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttca 19539647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23185123 - 23185233
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||| ||| | |||||||||||||||   |   ||||| |||||||||||||||||||| |||||   |||||||||||||||  |||    
T  23185123 acatcacttcagaagttgaactctatctgcttctgatcaa-tgacttcag-taggagaaaaagaagaaaaagctaac---acaattcaacccccc--ctt 23185215  T
Q  105 gtgtttttctcaccttca 122  Q
    |||||||||| |||||||    
T  23185216 gtgtttttcttaccttca 23185233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23596386 - 23596496
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||| ||| | |||||||||||||||   |   ||||| |||||||||||||||||||| |||||   |||||||||||||||  |||    
T  23596386 acatcacttcagaagttgaactctatctgcttctgatcaa-tgacttcag-taggagaaaaagaagaaaaagctaac---acaattcaacccccc--ctt 23596478  T
Q  105 gtgtttttctcaccttca 122  Q
    |||||||||| |||||||    
T  23596479 gtgtttttcttaccttca 23596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 20569591 - 20569652
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    |||||||||| |||||||||  |||||   |||||||||||||| ||||||||||||||||||||    
T  20569591 taggagaaaacgaagaaaaagttaaca---caattcaaccccccttcttgtgtttttctcacctt 20569652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 31968574 - 31968677
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttt 111  Q
    ||||||||||||||| ||||||||||||| |||| | |||||  ||| || |||| || ||||| |||||   ||||||||| ||||| |||||||||||    
T  31968574 ttcagaagtagaattctatctgcttctgaactgcat-tttcaattagtagcaaaaaaataaaaagctaac---acaattcaa-cccccttcttgtgtttt 31968668  T
Q  112 tctcacctt 120  Q
    |||||||||    
T  31968669 tctcacctt 31968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 1041565 - 1041528
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1041565 acaattcaaccccccttcttgtgtttttctcaccttca 1041528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 24450319 - 24450356
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  24450319 acaattcaaccccccttcttgtgtttttctcaccttca 24450356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 25828412 - 25828352
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacct 119  Q
    |||||||||| ||||||||| ||||||    ||||||||||||| |||||||||||||||||||    
T  25828412 taggagaaaacgaagaaaaagctaacat---aattcaaccccccttcttgtgtttttctcacct 25828352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 28732716 - 28732753
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  28732716 acaattcaaccccccttcttgtgtttttctcaccttca 28732753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 38040814 - 38040851
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38040814 acaattcaaccccccctcttgtgtttttctcaccttca 38040851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 16735817 - 16735872
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    |||||||||||||||||||||   |||||||||| | | ||||||||||||||||||||    
T  16735817 aaaaagaagaaaaaactaaca---caattcaacctctcttcttgtgtttttctcacctt 16735872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 17964145 - 17964208
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||  |||||   |||||||||||||| |||| |||||||||||||||||    
T  17964145 taggagaaaacgaagaaaaagttaaca---caattcaaccccccttcttttgtttttctcaccttca 17964208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 14794631 - 14794689
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||||||||| ||||   |||||||||||||| | |||||||||||||||||||||    
T  14794631 aaaaagaagaaaaaacaaaca---caattcaacccccccttcttgtgtttttctcaccttca 14794689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 40331096 - 40330984
Alignment:
Q  6 catcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttg 105  Q
    |||| |||||||||||||| | ||||||||| ||| |||| | ||| || ||||||||| |||||||||||| |||   ||||||||| ||||  |||||    
T  40331096 catctcttcagaagtagaactctatctgcttatgaactgcat-ttttagttaggagaaatagaagaaaaaacaaac---acaattcaa-cccctttcttg 40331002  T
Q  106 tg-tttttctcaccttca 122  Q
    || |||||||||||||||    
T  40331001 tgttttttctcaccttca 40330984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 22682679 - 22682641
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22682679 acaattcaaccccccttcttgtgtttttcacaccttcag 22682641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 23234262 - 23234185
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaaca 82  Q
    ||||||||||||||||| || | ||||||||||||||| | |  |||||| ||||||||||||||| ||||||| ||||    
T  23234262 acatcacttcagaagtaaaactctatctgcttctgatcag-tgttttcagcataggagaaaaagaaaaaaaaaccaaca 23234185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 34322720 - 34322789
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    ||||| |||||||||||||| || ||||| || |||||||  | |||||| ||||||||||||||||||||    
T  34322720 acatctcttcagaagtagaactacatctgtttttgatctgtgt-tttcagttaggagaaaaagaagaaaaa 34322789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 22763067 - 22763026
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcagaa 125  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  22763067 acaattcaacccccccttcttgtgtttttctcaccttcagaa 22763026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 24376376 - 24376312
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||  |||||   |||||||||||||| | |||||||||||||||||||||    
T  24376376 taggagaaaacgaagaaaaacttaaca---caattcaacccccccttcttgtgtttttctcaccttca 24376312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 24575290 - 24575226
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||||  ||| |||||||||||||||||||||    
T  24575290 taggagaaaatgaagaaaaagctaaca---caattcaacccttcattcttgtgtttttctcaccttca 24575226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 30794225 - 30794184
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcagaa 125  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  30794225 acaattcaacccccccttcttgtgtttttctcaccttcagaa 30794184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 38780654 - 38780591
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg-tttttctcaccttca 122  Q
    |||||||||||||||||||||| |||   ||||||| ||||||| ||||||| |||||||||||||||    
T  38780654 taggagaaaaagaagaaaaaaccaac---acaattc-accccccttcttgtgttttttctcaccttca 38780591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 41122546 - 41122583
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||| || ||||||||||||||||||||||    
T  41122546 acaattcaaccctccttcttgtgtttttctcaccttca 41122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 20319524 - 20319564
Alignment:
Q  85 acaattcaaccccc-catcttgtgtttttctcaccttcaga 124  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  20319524 acaattcaaccccctcttcttgtgtttttctcaccttcaga 20319564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 26866488 - 26866448
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  26866488 acaattcaacccccccttcttgtgtttttctcaccttcaga 26866448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 122
Target Start/End: Complemental strand, 38630955 - 38630927
Alignment:
Q  94 ccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||||||||||    
T  38630955 ccccccatcttgtgtttttctcaccttca 38630927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 23937 - 23824
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||||| ||||||||||||||||| |  |||||| |||||||||||||||||||||| |||   |||||||||||| || ||||    
T  23937 acatctcttcagaagtagaattctatctgcttctgatctg-tattttcagttaggagaaaaagaagaaaaaaccaac---acaattcaaccctccttctt 23842  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  23841 gtgtttttctcaccttca 23824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 19340098 - 19340214
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| | ||||||||  ||||   ||||||||| |||||| |||    
T  19340098 acatctcttcagaagtagaattctatttgcttctgacctgcttgtttcagataggagaaagaaaagaaaaagataac---acaattcaacccccccttct 19340194  T
Q  104 tgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||    
T  19340195 tgtgtttttctcaccttcag 19340214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 48806736 - 48806846
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag---aagaaaaaactaacagtacaattcaaccccccatcttgtgt 108  Q
    ||||||||||||| | ||||||||||||| ||||||||||||| ||||||||||||   ||||||||  ||||   ||||||||||||||| ||||||||    
T  48806736 ttcagaagtagaactctatctgcttctgaactgcttgtttcagttaggagaaaaagattaagaaaaagataac---acaattcaaccccccttcttgtgt 48806832  T
Q  109 ttttctcaccttca 122  Q
    ||||||||||||||    
T  48806833 ttttctcaccttca 48806846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 1292351 - 1292245
Alignment:
Q  15 agaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacc-ccccatcttgtgtttttc 113  Q
    |||||||||||| ||||||||||||| |||| | |||||| |||||||||||||||||||| |||||   ||||||||||| |||| |||||||||||||    
T  1292351 agaagtagaattctatctgcttctgaactgcat-tttcagttaggagaaaaagaagaaaaagctaac---acaattcaacctccccttcttgtgtttttc 1292256  T
Q  114 tcaccttcaga 124  Q
    |||||||||||    
T  1292255 tcaccttcaga 1292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 21382278 - 21382391
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||| | ||| | || |||||   ||||||||||||||| ||||    
T  21382278 acatctcttcagaagtagaattctatatgcttctgacctgcttgtttcagataggaaaaagaaaag-agaagctaac---acaattcaaccccccttctt 21382373  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  21382374 gtgtttttctcaccttca 21382391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 4493853 - 4493739
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||||||||| |||    
T  4493853 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaagctaaca---caattcaaccccccttct 4493758  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  4493757 tgtgtttttctcaccttca 4493739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 24795563 - 24795676
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa------ccccccatcttg 105  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||| |||||   |||||||||      |||||  |||||    
T  24795563 ttcagaagtagaattctatctgcttctgatctgcctgtttcagataggagaaagaaaagaaaaagctaac---acaattcaacccaccccccctttcttg 24795659  T
Q  106 tgtttttctcaccttca 122  Q
    |||||||||||||||||    
T  24795660 tgtttttctcaccttca 24795676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 32265559 - 32265674
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaac-cccccatct 103  Q
    ||||| |||||||||||||| | ||||||||||||| |||| | ||| || || ||||||||||||||||| |||||   |||||||||| ||||| |||    
T  32265559 acatctcttcagaagtagaactctatctgcttctgaactgcat-ttttagttaagagaaaaagaagaaaaacctaac---acaattcaactcccccttct 32265654  T
Q  104 tgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||    
T  32265655 tgtgtttttctcaccttcag 32265674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 15705343 - 15705458
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||| ||||||||||||| |  |||||| |||||||||||||||||||| | |||   ||||||||||||||| ||||    
T  15705343 acatctcttcagaagtagaactctatttgcttctgatctg-tgttttcagttaggagaaaaagaagaaaaagccaac---acaattcaaccccccttctt 15705438  T
Q  105 gtg--tttttctcaccttca 122  Q
    |||  |||||||||||||||    
T  15705439 gtgtttttttctcaccttca 15705458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 8182265 - 8182151
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||| ||||| | |||||||||||||||||| | |||||| ||||||||||| ||||||||   |||   ||||||||| ||||| ||||    
T  8182265 acatctcttcagaaatagaactctatctgcttctgatctgcat-tttcagttaggagaaaaacaagaaaaaggcaac---acaattcaa-cccccttctt 8182171  T
Q  105 gtgtttttctcaccttcaga 124  Q
    ||||||||||||||||||||    
T  8182170 gtgtttttctcaccttcaga 8182151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 14186995 - 14186880
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatc 102  Q
    |||||||||||||||||||||| ||||||||||||||| | |  ||||||  ||||||||||||||||||||   |||   ||||||||| |||||| ||    
T  14186995 acatcacttcagaagtagaattctatctgcttctgatcag-tgttttcagcctaggagaaaaagaagaaaaagtaaac---acaattcaacccccccttc 14186900  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  14186899 ttgtgtttttctcaccttca 14186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 48063666 - 48063772
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgttt 110  Q
    |||||||||||||| | ||||||||| ||| |||| | |||||| |||||||||||||||||||||||   || | ||||||| ||||| ||||||||||    
T  48063666 cttcagaagtagaactctatctgcttttgaactgcat-tttcagttaggagaaaaagaagaaaaaact---agcataattcaa-cccccttcttgtgttt 48063760  T
Q  111 ttctcaccttca 122  Q
    ||||||||||||    
T  48063761 ttctcaccttca 48063772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 11792179 - 11792065
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||||||||||||   ||||||||||||||| |  | ||  |  |||||||||| |||||||||  |||||   |||||||||||||| ||||    
T  11792179 acatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagataaca---caattcaaccccccttctt 11792083  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  11792082 gtgtttttctcaccttca 11792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 16557466 - 16557575
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgttt 110  Q
    ||||||||||||| | ||||||||||||||| |  | |||||| | |||||| |||||||||||| | ||||   |||||||||||||| ||||||||||    
T  16557466 ttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagataaagaagaaaaagccaaca---caattcaaccccccttcttgtgttt 16557561  T
Q  111 ttctcaccttcaga 124  Q
    ||||||||||||||    
T  16557562 ttctcaccttcaga 16557575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 16608196 - 16608087
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgttt 110  Q
    ||||||||||||| | ||||||||||||||| |  | |||||| | |||||| |||||||||||| | ||||   |||||||||||||| ||||||||||    
T  16608196 ttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagataaagaagaaaaagccaaca---caattcaaccccccttcttgtgttt 16608101  T
Q  111 ttctcaccttcaga 124  Q
    ||||||||||||||    
T  16608100 ttctcaccttcaga 16608087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 13138774 - 13138889
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccc-catc 102  Q
    |||||||||||||||||||| | |||||||||||||||    | |||||| ||| ||||||||||||||||| | ||||   ||||||||||||| | ||    
T  13138774 acatcacttcagaagtagaactctatctgcttctgatcaatgt-tttcagcataagagaaaaagaagaaaaagccaaca---caattcaaccccctcttc 13138869  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  13138870 ttgtgtttttctcaccttca 13138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 22580103 - 22580221
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatc- 102  Q
    |||||| ||||||||||||| | ||||||||| ||||| |  | |||||| ||||||||||||||||||||| | ||||   ||||||||||||||  |     
T  22580103 acatcagttcagaagtagaactttatctgcttttgatcagtgt-tttcagcataggagaaaaagaagaaaaagccaaca---caattcaacccccccccc 22580198  T
Q  103 ttgtgtttttctcaccttcagaa 125  Q
    |||||||||||||||||||||||    
T  22580199 ttgtgtttttctcaccttcagaa 22580221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 33604213 - 33604099
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||| ||||||| |||||| ||| ||||||||||| |  | |||||| | ||||||||| ||||||||| | ||||   |||||||||||||| |||    
T  33604213 acatcacgtcagaagcagaattctatttgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaagccaaca---caattcaaccccccttct 33604118  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  33604117 tgtgtttttctcaccttca 33604099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 19711857 - 19711939
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag--aagaaaaaactaaca 82  Q
    ||||||||  ||||||||| ||||| ||||||||||||| || |||||||||| ||||||||||||  |||||||| ||||||    
T  19711857 tggacatctattcagaagtggaattctatctgcttctgaactacttgtttcagttaggagaaaaaggaaagaaaaagctaaca 19711939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 21691733 - 21691613
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccc--at 101  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| | ||||||| | |||   |||||||||||||||   |    
T  21691733 acatcacttcagaagtagaactttatctgcttctgatcag-tgttttcagcttaggagaaaatgtagaaaaagccaac---acaattcaacccccccttt 21691638  T
Q  102 cttgtgtttttctcaccttcagaaa 126  Q
    |||||||||||||||||||||||||    
T  21691637 cttgtgtttttctcaccttcagaaa 21691613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 27871026 - 27870957
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    ||||| |||||||||||||||| ||||||||||||| |||| | ||| || ||||||||||||||||||||    
T  27871026 acatctcttcagaagtagaattctatctgcttctgaactgcatcttt-agttaggagaaaaagaagaaaaa 27870957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 13034702 - 13034819
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatc 102  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| ||||||||||  || |  ||||||||| |||||| ||    
T  13034702 acatcacttcagaagtagaactgtatctgcttctgatcag-tgttttcagcttaggagaaaatgaagaaaaaa--aataacacaattcaacccccccttc 13034798  T
Q  103 ttgtgtttttctcaccttcag 123  Q
    |||||||||| ||||||||||    
T  13034799 ttgtgtttttatcaccttcag 13034819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 2499337 - 2499223
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||| ||||||||||||| | ||||||||||||||  |  | |||||| | ||||||||| |||||||||  |||||   |||||||| ||||| |||    
T  2499337 acatcatttcagaagtagaactctatctgcttctgattagtgt-tttcagcttaggagaaaatgaagaaaaagttaaca---caattcaatcccccttct 2499242  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  2499241 tgtgtttttctcaccttca 2499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 9710683 - 9710797
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | ||||||  ||||||||||||||  |||| | |||   ||||||||||| ||| |||    
T  9710683 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaac---acaattcaaccgcccttct 9710778  T
Q  104 tgtgtttttctcaccttca 122  Q
    || ||||||||||||||||    
T  9710779 tgcgtttttctcaccttca 9710797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 10884070 - 10884133
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||  |||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  10884070 taggagaaaacaaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttca 10884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 13473336 - 13473410
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaacta 79  Q
    |||||||||||||||||||| ||||||||||||||||| | |  ||||||  |||||||||| |||||||||||||    
T  13473336 acatcacttcagaagtagaactatatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaaacta 13473410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 1559969 - 1560007
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1559969 acaattcaaccccccttcttgtgtttttctcaccttcag 1560007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 6045156 - 6045194
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  6045156 acaattcaaccccccttcttgtgtttttctcaccttcag 6045194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 15574457 - 15574561
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||| ||||||| | ||||||||||||||||| |  |||||  |||||||||||||||||||| | |||   ||||||||| |||||| |||    
T  15574457 acatctcttcagtagtagaactctatctgcttctgatctg-tattttcaattaggagaaaaagaagaaaaagccaac---acaattcaacccccccttct 15574552  T
Q  104 tgtgttttt 112  Q
    |||||||||    
T  15574553 tgtgttttt 15574561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 4433466 - 4433503
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4433466 acaattcaaccccccttcttgtgtttttctcaccttca 4433503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 13259369 - 13259406
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13259369 acaattcaaccccccttcttgtgtttttctcaccttca 13259406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 13879452 - 13879361
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||||||||||||||||||| | ||||||||||||||| | |  |||||| ||| ||||||||||||||||| | |||   |||||||||||||||    
T  13879452 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcataagagaaaaagaagaaaaagcaaac---acaattcaacccccc 13879361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 14746545 - 14746582
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14746545 acaattcaaccccccttcttgtgtttttctcaccttca 14746582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 16546186 - 16546277
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||||||||||||| | |||   |||||||||||||||    
T  16546186 acatcacttcagaagtagaactttatctgcttctgatcag-tgttttcagcttaggagaaaaagaagaaaaagccaac---acaattcaacccccc 16546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 16619476 - 16619385
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||||||||||||| | |||   |||||||||||||||    
T  16619476 acatcacttcagaagtagaactttatctgcttctgatcag-tgttttcagcttaggagaaaaagaagaaaaagccaac---acaattcaacccccc 16619385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18440621 - 18440584
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18440621 acaattcaaccccccttcttgtgtttttctcaccttca 18440584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 19237985 - 19238030
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcagaaacaac 130  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||    
T  19237985 acaattcaaccccccttcttttgtttttctcaccttcagcaacaac 19238030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 21284300 - 21284337
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21284300 acaattcaaccccccttcttgtgtttttctcaccttca 21284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 24883269 - 24883306
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  24883269 acaattcaaccccccttcttgtgtttttctcaccttca 24883306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 33421040 - 33420949
Alignment:
Q  28 tatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg-tttttctcaccttca 122  Q
    |||| ||||||||||||  | |||||| |||||||||||||||||||| | |||   |||||||||||| || ||||||| |||||||||||||||    
T  33421040 tatccgcttctgatctgtgt-tttcagttaggagaaaaagaagaaaaagccaac---acaattcaaccctccgtcttgtgttttttctcaccttca 33420949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 39285439 - 39285503
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||| |||||   |||||||| |||||| ||||||||||||||||||||||    
T  39285439 taggagaaaatgaagaaaaaagtaaca---caattcaatccccccttcttgtgtttttctcaccttca 39285503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 12367657 - 12367720
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||  |||||   |||||||||||||| |||||||||||||||| |||||    
T  12367657 taggagaaaacgaagaaaaagataaca---caattcaaccccccgtcttgtgtttttctcaacttca 12367720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 13027851 - 13027914
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| | ||||   |||||||||| ||| ||||||||||||||||||||||    
T  13027851 taggagaaaatgaagaaaaagcaaaca---caattcaacctcccttcttgtgtttttctcaccttca 13027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 13902553 - 13902616
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||| ||| ||||||||||||||| ||||||    
T  13902553 taggagaaaacgaagaaaaagctaaca---caattcaacctcccttcttgtgtttttctccccttca 13902616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 16315383 - 16315497
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccc-cc 99  Q
    |||| ||||||||||||| |||| | ||| ||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||||||| ||    
T  16315383 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaacctaaca---caattcaacccctcc 16315478  T
Q  100 atcttgtgtttttctcacc 118  Q
     ||||||||||||||||||    
T  16315479 ttcttgtgtttttctcacc 16315497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 33692571 - 33692686
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||| ||| | ||||| |||||||||    | |||||| | ||||||||| |||||||||  |||||   ||||||||| |||| | |    
T  33692571 acatcacttcagaagtggaactctatctacttctgatcaatgtttttcagcttaggagaaaaggaagaaaaagttaaca---caattcaactcccctttt 33692667  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  33692668 tgtgtttttctcaccttca 33692686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 12223314 - 12223372
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   ||||||||||| |||| |||||||||||||||||||||    
T  12223314 aaaaagaagaaaaatctaaca---caattcaaccctccattcttgtgtttttctcaccttca 12223372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 13261601 - 13261636
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcacctt 120  Q
    ||||||||||||||| ||||||||||||||||||||    
T  13261601 acaattcaaccccccttcttgtgtttttctcacctt 13261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 28623202 - 28623272
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaa 75  Q
    |||||||||||||||||||| | ||||||||||||||| |  || |||||  ||||||||||||||||||||    
T  28623202 acatcacttcagaagtagaactctatctgcttctgatcagtgtg-ttcagcttaggagaaaaagaagaaaaa 28623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 4820794 - 4820678
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||| |||||||| | ||||||||||||||  |  | |||||| || ||||||  ||| ||||| | ||||   |||||||||||||||||||    
T  4820794 acatcacttcaaaagtagaactctatctgcttctgattagtgt-tttcagttatgagaaattgaataaaaagcaaaca---caattcaaccccccatctt 4820699  T
Q  105 gtgt-ttttctcaccttcaga 124  Q
    |||| |||| |||||||||||    
T  4820698 gtgttttttttcaccttcaga 4820678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 9802166 - 9802128
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  9802166 acaattcaacccctaatcttgtgtttttctcaccttcag 9802128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 16155591 - 16155625
Alignment:
Q  7 atcacttcagaagtagaattatatctgcttctgat 41  Q
    |||||||||||||||||||| ||||||||||||||    
T  16155591 atcacttcagaagtagaattctatctgcttctgat 16155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23280824 - 23280941
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattc-aaccccccatc 102  Q
    ||||||||| |||||| |||   ||||||||||||||| |  | |||||| | ||||||||||||||||||| |||||   ||||||| | |||||| ||    
T  23280824 acatcactttagaagtggaacactatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaac---acaattctacccccccttc 23280920  T
Q  103 ttgtg-tttttctcaccttca 122  Q
    ||||| |||||||||||||||    
T  23280921 ttgtgttttttctcaccttca 23280941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 4832173 - 4832210
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  4832173 acatcacttcagaagtagaactctatctgcttctgatc 4832210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 15087862 - 15087825
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  15087862 acatcacttcagaagtagaactctatctgcttctgatc 15087825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 16033171 - 16033134
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  16033171 acaattcaacccctcttcttgtgtttttctcaccttca 16033134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 23125212 - 23125160
Alignment:
Q  63 aaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacc 118  Q
    ||||||||||||| ||||||   ||||||||||| || ||||||||||||||||||    
T  23125212 aaaagaagaaaaagctaaca---caattcaaccctccttcttgtgtttttctcacc 23125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 30025192 - 30025128
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| | ||||   |||||||||||||| | |||||||||||||||||||||    
T  30025192 taggagaaaacgaagaaaaagcaaaca---caattcaacccccccttcttgtgtttttctcaccttca 30025128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 38594555 - 38594592
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  38594555 acaattcaaccccccttcttgtgtatttctcaccttca 38594592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 330916 - 330846
Alignment:
Q  49 tttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||| |||||||||  ||||||||||| ||||   |||||||||||||| | |||||||||||||||||||||    
T  330916 tttcagttaggagaaac-gaagaaaaaaccaaca---caattcaacccccccttcttgtgtttttctcaccttca 330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 9802334 - 9802280
Alignment:
Q  63 aaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttc 121  Q
    ||||||||||||| ||||||   |||||||||||||  |||||||||||||||||||||    
T  9802334 aaaagaagaaaaatctaaca---caattcaaccccct-tcttgtgtttttctcaccttc 9802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 13731522 - 13731616
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||| ||||||||||||| |||| | ||| ||||||||||||| |  ||||||  |||||||||| ||||||||| |||||   |||||||||||||||    
T  13731522 tggaaatcacttcagaagcagaactctatttgcttctgatctg-tgttttcagcttaggagaaaacgaagaaaaagctaac---acaattcaacccccc 13731616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 16310804 - 16310840
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgat 41  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  16310804 acatcacttcagaagcagaattatatttgcttctgat 16310840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 31117407 - 31117435
Alignment:
Q  94 ccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||||||||||    
T  31117407 ccccccatcttgtgtttttctcaccttca 31117435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 21983908 - 21983792
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc-atct 103  Q
    ||||| |||||||||||||| | ||||||||||||| |||||| |||||||||||||||||||||||||||   |||   |||||||||||||||  |||    
T  21983908 acatctcttcagaagtagaactctatctgcttctgaactgcttatttcagataggagaaaaagaagaaaaagaaaac---acaattcaaccccccgttct 21983812  T
Q  104 tgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||    
T  21983811 tgtgtttttctcaccttcag 21983792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 1577158 - 1577040
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| ||| ||||||||||||||||||| ||||   |||||||||||||| ||     
T  1577158 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcataagagaaaaagaagaaaaaaccaaca---caattcaaccccccttcg 1577063  T
Q  104 tgtgtttttctcaccttcagaaa 126  Q
    | |||||||||||||||||||||    
T  1577062 tatgtttttctcaccttcagaaa 1577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 7309099 - 7308986
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||| ||||| |||||| ||| ||||||||||| |  | |||||| |||||||||| ||||||||||| ||||   |||||||||||||| ||||    
T  7309099 acatcactttagaagcagaattctatttgcttctgatcagtgt-tttcagttaggagaaaacgaagaaaaaaccaaca---caattcaaccccccttctt 7309004  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  7309003 gtgtttttctcaccttca 7308986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 22153135 - 22153019
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagata-ggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | |||||||||||||||    | |||||| || |||||||||||||||||| | ||||   |||||||||||||| |||    
T  22153135 acatcacttcagaagtagaactctatctgcttctgatcaaagt-tttcagctaaggagaaaaagaagaaaaagccaaca---caattcaaccccccttct 22153040  T
Q  104 tgtgtttttctcaccttcaga 124  Q
    |||||||||||||||||||||    
T  22153039 tgtgtttttctcaccttcaga 22153019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 42283952 - 42283840
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||||| || |||||||||| |||||||||||||||| |||||| | ||||||||  ||||   ||| ||||| ||||| ||||    
T  42283952 acatctcttcagaagtagaattctacctgcttctgacctgcttgtttcagata-gagaaagaaaagaaaaagttaac---acacttcaa-cccccttctt 42283858  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  42283857 gtgtttttctcaccttca 42283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 44824523 - 44824638
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| || |||||||||||||||| |  |||||| |||||||||||||||||||  | |||   ||||||||||||||| ||||    
T  44824523 acatctcttcagaagtagaactacatctgcttctgatctg-tgttttcagttaggagaaaaagaagaaaaggccaac---acaattcaaccccccttctt 44824618  T
Q  105 gtgttt--ttctcaccttca 122  Q
    ||||||  ||||||||||||    
T  44824619 gtgttttgttctcaccttca 44824638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 48571022 - 48571137
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| ||| |||||||||| | |||||| |||| |||||  | |||||| |||||||||||||||||||||  ||||   |||||||||||||  ||||    
T  48571022 acatctctttagaagtagaactctatctgtttctaatctgtat-tttcagttaggagaaaaagaagaaaaaatcaaca---caattcaacccccattctt 48571117  T
Q  105 gtgtttttctcaccttcaga 124  Q
    ||||||||||||||||||||    
T  48571118 gtgtttttctcaccttcaga 48571137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 32786708 - 32786823
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||| ||| | ||||||||||||||| |  | |   |  |||||||||||||| ||||| ||||||   |||||||||||||| ||||    
T  32786708 acatcacttcagaagtggaactttatctgcttctgatcagtgtttacaacttaggagaaaaagaaaaaaaatctaaca---caattcaaccccccttctt 32786804  T
Q  105 gtgtttttctcaccttcag 123  Q
    |||||||||||||||||||    
T  32786805 gtgtttttctcaccttcag 32786823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 21135927 - 21136016
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccc 97  Q
    ||||| |||||||||||||| |  |||||||||||| |||| | |||||| |||||||||||||||||||| |||||   |||||||||||||    
T  21135927 acatctcttcagaagtagaactcgatctgcttctgaactgcatttttcagttaggagaaaaagaagaaaaagctaac---acaattcaacccc 21136016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 29215107 - 29214995
Alignment:
Q  7 atcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttg 105  Q
    |||||||||||||| ||| | ||||||||||||||| |  | |||||| | || |||||||||||||||||||||   ||||||||||| |||| ||||     
T  29215107 atcacttcagaagtggaactctatctgcttctgatcagtgt-tttcagcttagaagaaaaagaagaaaaaactaa---tacaattcaacaccccttctta 29215012  T
Q  106 tgtttttctcaccttca 122  Q
    |||||||||||||||||    
T  29215011 tgtttttctcaccttca 29214995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 12625366 - 12625430
Alignment:
Q  55 ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||||||||||||||||   ||||||||||| || ||||||||||||||||||||||    
T  12625366 ataggagaaaacgaagaaaaaactaaca---caattcaaccctccttcttgtgtttttctcaccttca 12625430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 46088294 - 46088187
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg-ttt 110  Q
    ||||||||||||| | |||||| |||||| |||| | |||||| |||||||||||| ||||||| |||||   |||||||||||| || ||||||| |||    
T  46088294 ttcagaagtagaactctatctgattctgaactgcat-tttcagttaggagaaaaaggagaaaaacctaac---acaattcaaccctccttcttgtgtttt 46088199  T
Q  111 ttctcaccttca 122  Q
    ||||||||||||    
T  46088198 ttctcaccttca 46088187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 9346031 - 9345973
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    |||||||||||||||||||||   ||||||||||| || |||||||||||||||||||||||    
T  9346031 aaaaagaagaaaaaactaaca---caattcaaccctccttcttgtgtttttctcaccttcag 9345973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 25449357 - 25449469
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||||||||| || | ||||||||||||||| | |  |||||| |||||||||||||| ||| | | |||   ||||||||| ||||| ||||    
T  25449357 acatcacttcagaagtataactctatctgcttctgatcag-tgttttcagttaggagaaaaagaaaaaatagccaac---acaattcaa-cccccttctt 25449451  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  25449452 gtgtttttctcaccttca 25449469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 30892374 - 30892260
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||| |||||||||| | ||| ||||||||||| |  | |||||| | || |||||  ||||||||| ||||||   |||||||||||||| |||    
T  30892374 acatcactttagaagtagaactctatttgcttctgatcagtgt-tttcagcttagaagaaatcgaagaaaaagctaaca---caattcaaccccccttct 30892279  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  30892278 tgtgtttttctcaccttca 30892260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 27858038 - 27857980
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    |||||||||||||| ||||||   ||||||||||| || |||||||||||||||||||||||    
T  27858038 aaaaagaagaaaaagctaaca---caattcaaccctccttcttgtgtttttctcaccttcag 27857980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 2820096 - 2820153
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||   |||||||||| ||| |||| |||||||||||||||||    
T  2820096 aaaaagaagaaaaaactaaca---caattcaacctcccttcttatgtttttctcaccttca 2820153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 20959851 - 20959911
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||||||||   ||||||||||||||   |||||||||||||||||||||    
T  20959851 taggagaaaacgaagaaaaaactaac---acaattcaaccccc---cttgtgtttttctcaccttca 20959911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 21205629 - 21205717
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||| ||||| |||||||| | ||||||||||||| |||| |   |||| |||||||||||||||||||| |||||   |||||||||||||||    
T  21205629 acatctcttcaaaagtagaactctatctgcttctgaactgcat---tcagttaggagaaaaagaagaaaaagctaac---acaattcaacccccc 21205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 21215444 - 21215532
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||| ||||| |||||||| | ||||||||||||| |||| |   |||| |||||||||||||||||||| |||||   |||||||||||||||    
T  21215444 acatctcttcaaaagtagaactctatctgcttctgaactgcat---tcagttaggagaaaaagaagaaaaagctaac---acaattcaacccccc 21215532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 23975685 - 23975723
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23975685 acaattcaaccccccttcttgtgtttttctcaccttcag 23975723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 24218622 - 24218569
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacc 118  Q
    |||||||||||||||||||||   ||||||||| |||| ||||||||||||||||||    
T  24218622 aaaaagaagaaaaaactaaca---caattcaacaccccttcttgtgtttttctcacc 24218569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17017815 - 17017778
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17017815 acaattcaaccccccttcttgtgtttttctcaccttca 17017778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19037202 - 19037165
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19037202 acaattcaaccccccttcttgtgtttttctcaccttca 19037165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 19171211 - 19171248
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19171211 acaattcaaccccccttcttgtgtttttctcaccttca 19171248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 30571511 - 30571443
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaa 74  Q
    ||||| |||||||||||||| | || |||||||||||||| |  |||||| |||||||||||||||||||    
T  30571511 acatctcttcagaagtagaactctacctgcttctgatctg-tattttcagttaggagaaaaagaagaaaa 30571443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 39194937 - 39194974
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  39194937 acaattcaaccccccctcttgtgtttttctcaccttca 39194974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 51657289 - 51657326
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  51657289 acaattcaaccccccttcttgtgtttttctcaccttca 51657326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 17025821 - 17025884
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||  |||||||| ||||||   |||||||||||||| ||||||||||||||||| ||||    
T  17025821 taggagaaaacaaagaaaaatctaaca---caattcaaccccccttcttgtgtttttctcactttca 17025884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 10250302 - 10250194
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| ||| |||||||||| | ||| ||||| |||||||  | |||||| |||||||||||||||||||||| |||   |||||||| |||     |||    
T  10250302 acatctctttagaagtagaactctatatgcttttgatctgtat-tttcagttaggagaaaaagaagaaaaaaccaac---acaattcacccc-----ctt 10250212  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  10250211 gtgtttttctcaccttca 10250194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 18517884 - 18517942
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    ||||||||| |||||||||||   |||||||||||||| | |||||||||||||||||||||    
T  18517884 aaaaagaagcaaaaactaaca---caattcaacccccctttcttgtgtttttctcaccttca 18517942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 37640313 - 37640208
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatcttgtgttt 110  Q
    ||||||||||||| | ||||||||||| |  |||||||||||| ||| |||||   ||||||||  ||||   ||||||||| |||||| |||| |||||    
T  37640313 ttcagaagtagaactctatctgcttctaaattgcttgtttcagttagaagaaa---aagaaaaagataac---acaattcaacccccccttcttatgttt 37640220  T
Q  111 ttctcaccttca 122  Q
    ||||||||||||    
T  37640219 ttctcaccttca 37640208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23037293 - 23037409
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccccca-tc 102  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  || || |||||||||||||| | |||    ||||||||||||||| ||    
T  23037293 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttatgataaaaagaagaaaaagccaac---ccaattcaaccccccattc 23037388  T
Q  103 ttgtg-tttttctcaccttca 122  Q
    ||||| |||||||||||||||    
T  23037389 ttgtgttttttctcaccttca 23037409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 46181693 - 46181731
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  46181693 acaattcaacccctcttcttgtgtttttctcaccttcag 46181731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 5973124 - 5973087
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  5973124 acaattcaaccccccttcttgtgtttttcacaccttca 5973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 14264198 - 14264235
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  14264198 acatcacttcagaagtagaattctatctgcttttgatc 14264235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 21121856 - 21121912
Alignment:
Q  40 atctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||||| | |||||| |||||||||||||||||||| |||||   |||||||||||||||    
T  21121856 atctgcatttttcagttaggagaaaaagaagaaaaagctaac---acaattcaacccccc 21121912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 22018550 - 22018513
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  22018550 acaattcacccccccttcttgtgtttttctcaccttca 22018513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22465659 - 22465696
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  22465659 acaattcaaccccccttcttgtatttttctcaccttca 22465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 23926260 - 23926227
Alignment:
Q  94 ccccccatcttgtgtttttctcaccttcagaaac 127  Q
    |||||| |||||||||||||||||||||||||||    
T  23926260 ccccccttcttgtgtttttctcaccttcagaaac 23926227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 38281672 - 38281635
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  38281672 acatcacttcagaagtagaactatatctgtttctgatc 38281635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 13223420 - 13223380
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  13223420 acaattcaacccccccttcttgtgtttttctcaccttcaga 13223380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 19214875 - 19214828
Alignment:
Q  49 tttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||||||||||||||||||||||||| | |||   |||||||||||||||    
T  19214875 tttcagataggagaaaaagaagaaaaagcaaac---acaattcaacccccc 19214828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 25398725 - 25398671
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    ||||||||||||||| |||||   |||||||||||||  ||||||||||||||||||||    
T  25398725 aaaaagaagaaaaaattaaca---caattcaaccccct-tcttgtgtttttctcacctt 25398671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 26588903 - 26588793
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag--aagaaaaaactaacagtacaattcaaccccccatcttgtgtt 109  Q
    ||||||||||||| | ||||||||||||| ||||||||||||| ||||||||||||  |||||||| |||||   ||||||||||||||  |||||||||    
T  26588903 ttcagaagtagaactctatctgcttctgaactgcttgtttcagttaggagaaaaagaaaagaaaaagctaac---acaattcaacccccattcttgtgtt 26588807  T
Q  110 tttctcaccttcag 123  Q
    ||||||||||||||    
T  26588806 tttctcaccttcag 26588793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 19066854 - 19066964
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||||||||||| | ||||||||||||| ||||||||||||||||||||||| | |||||||| |||||   ||||||||| |||||| |||    
T  19066854 acatctcttcagaagtagaactctatctgcttctgacctgcttgtttcagataggagaaagaaaagaaaaagctaac---acaattcaagccccccttct 19066950  T
Q  104 tgtgtttttctcac 117  Q
    ||||||||||||||    
T  19066951 tgtgtttttctcac 19066964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 16333038 - 16332923
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||||||| | ||||||||||||||||| |  |||||| |||||||||||||||||||| | |||   ||||||||||||||| ||||    
T  16333038 acatcacttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaaagaagaaaaagccaac---acaattcaaccccccttctt 16332943  T
Q  105 gtg-tttttctcaccttcag 123  Q
    ||| ||||||||||||||||    
T  16332942 gtgttttttctcaccttcag 16332923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 17317331 - 17317442
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| ||||| |||||||||| |||||||||||||  || ||||||||||||||||||| | |||||||| |||||   |||||||||||||||    |    
T  17317331 acatctcttcaaaagtagaattctatctgcttctgacatgtttgtttcagataggagaaataaaagaaaaagctaac---acaattcaacccccc----t 17317423  T
Q  105 gtgtttttctcaccttcag 123  Q
    |||||||||||||||||||    
T  17317424 gtgtttttctcaccttcag 17317442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 10631446 - 10631331
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca-tc 102  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||||||||||||| |||||   |||||||||||| ||| ||    
T  10631446 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagctaac---acaattcaaccctccattc 10631351  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  10631350 ttgtgtttttctcaccttca 10631331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 21234465 - 21234350
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca-tc 102  Q
    |||||||||||||||||||||| ||||||||||||||| |  | |||||| | |||||||||||| |||||| |||||   |||||||||||||||| ||    
T  21234465 acatcacttcagaagtagaattctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaggaaaaagctaac---acaattcaaccccccattc 21234370  T
Q  103 ttgtgtttttctcaccttca 122  Q
    |||| |||||||||||||||    
T  21234369 ttgtatttttctcaccttca 21234350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 14101284 - 14101402
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||| |||||||| | ||||||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||||||||  |||    
T  14101284 acatcacttcataagtagaactctatctgcttctgatcagtat-tttcagcttaggagaaaacgaagaaaaagctaaca---caattcaaccccctttct 14101379  T
Q  104 tgtgtttttctcaccttcagaaa 126  Q
    |||||||||||||||||||||||    
T  14101380 tgtgtttttctcaccttcagaaa 14101402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 18912723 - 18912632
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||| | |||||||| ||   | ||||||||||||||||    
T  18912723 acatctcttcagaagtagaattctatctgcttctgacctgcatgtttcagataggagaaagaaaagaaaaagct---attacaattcaacccccc 18912632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 32543572 - 32543458
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||| ||| | ||||||||||||||| |  | |||||| | ||||||||||||||||||| ||||||   ||||||||||| || |||    
T  32543572 acatcacttcagaagtggaactctatctgcttctgatcagtgt-tttcaggttaggagaaaaagaagaaaaagctaaca---caattcaaccctccttct 32543477  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  32543476 tgtgtttttctcaccttca 32543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 19688042 - 19687928
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccc-catct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | ||  | ||||||||||| ||||||||||| ||||   ||||||||||||| | |||    
T  19688042 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcaacataggagaaaa-gaagaaaaaaccaaca---caattcaaccccctcttct 19687947  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  19687946 tgtgtttttctcaccttca 19687928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 15301476 - 15301410
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcagaa 125  Q
    |||||||||| ||||||||| ||||||   |||||||||||||| |||||||||||||||||||||||||    
T  15301476 taggagaaaacgaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttcagaa 15301410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 21624401 - 21624284
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-c 102  Q
    ||||||||||||||||| || | ||||||||||||||| |  | |||||| | ||||||||||||||||||| | ||||   |||||||||||||| | |    
T  21624401 acatcacttcagaagtaaaactctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagccaaca---caattcaacccccccttc 21624306  T
Q  103 ttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||||||||||    
T  21624305 ttgtgtttttctcaccttcaga 21624284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 17380872 - 17380757
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-c 102  Q
    |||||||||||||||||||| | ||| ||||||||||| |  | |||||| | ||||||||||||||||||| | ||||   |||||||||||||| | |    
T  17380872 acatcacttcagaagtagaactctatttgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagccaaca---caattcaacccccccttc 17380777  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  17380776 ttgtgtttttctcaccttca 17380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 13435194 - 13435080
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | |||||||||  |||||||| | ||||   |||||||||||||| |||    
T  13435194 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaacaaagaaaaagcaaaca---caattcaaccccccttct 13435099  T
Q  104 tgtgtttttctcaccttca 122  Q
    ||| |||||||||||||||    
T  13435098 tgtttttttctcaccttca 13435080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 19833829 - 19833942
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||||| || | | | ||||||||||||||| |  | |||||| ||||||||||||| ||||||   ||||   |||||||||||||| ||||    
T  19833829 acatcacttcagaggtggtactctatctgcttctgatcagtgt-tttcagttaggagaaaaagatgaaaaagaaaaca---caattcaaccccccttctt 19833924  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  19833925 gtgtttttctcaccttca 19833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 15551292 - 15551235
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  15551292 aaaaagaagaaaaatctaaca---caattcaaccccccttcttgtgtttttctcaccttca 15551235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 15532470 - 15532585
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccc-ccatc 102  Q
    |||||||||||||||||||| | ||| |||| |||||| |  | |||||| | ||||||||||||||||||| |||||   |||||||||||||  | ||    
T  15532470 acatcacttcagaagtagaactctatttgctcctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagctaac---acaattcaaccccttcttc 15532565  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  15532566 ttgtgtttttctcaccttca 15532585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 21617562 - 21617450
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| |||||||||||||||||| | | |||   ||||||||||||||  | ||    
T  21617562 acatctcttcagaagtagaactctatctgcttctgatctg-tgttttcagttaggagaaaaagaagaaacagccaac---acaattcaaccccc--tttt 21617469  T
Q  105 gtg-tttttctcaccttca 122  Q
    ||| |||||||||||||||    
T  21617468 gtgttttttctcaccttca 21617450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 17304106 - 17304224
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccca---- 100  Q
    |||||||||||||||  ||| | ||||||||||||||| | |   ||||| |||||||||| ||||||||| ||||||   |||||||||||||||        
T  17304106 acatcacttcagaagctgaactctatctgcttctgatcag-tgacttcag-taggagaaaacgaagaaaaagctaaca---caattcaaccccccaccct 17304200  T
Q  101 tcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||||||||||||    
T  17304201 tcttgtgtttttctcaccttcaga 17304224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 22077211 - 22077328
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggag--aaaaagaagaaaaaactaacagtacaattcaa-ccccccat 101  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| ||||||  |||||||||||||| | |||||   ||||||| |||||| |    
T  22077211 acatctcttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaaaaagaagaaaaagccaacag---aattcaaccccccctt 22077306  T
Q  102 cttgtg-tttttctcaccttca 122  Q
    |||||| |||||||||||||||    
T  22077307 cttgtgttttttctcaccttca 22077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 22801452 - 22801338
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||||||| | ||||||||||||||| |  |  ||    |||| |||||| |||||||| ||||||   |||||||||||||  ||||    
T  22801452 acatcacttcagaagtagaactctatctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaaca---caattcaaccccct-tctt 22801357  T
Q  105 gtgtttttctcaccttcag 123  Q
    |||||||||||||||||||    
T  22801356 gtgtttttctcaccttcag 22801338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 30451904 - 30451943
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30451904 acaattcaaccccccttcttgtgtttttctcaccttcaga 30451943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 32756793 - 32756754
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32756793 acaattcaaccccccttcttgtgtttttctcaccttcaga 32756754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 9717135 - 9717018
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacc-ccccatct 103  Q
    |||||||||||||||| ||| | ||||||||| ||||| |  | ||  |  |||||||||||||||||||  | |||   ||||||||||| |||| |||    
T  9717135 acatcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgcaaac---acaattcaacctccccttct 9717039  T
Q  104 tgtgtttttctcaccttcaga 124  Q
    |||||||||||||||||||||    
T  9717038 tgtgtttttctcaccttcaga 9717018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 16528624 - 16528511
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-ct 103  Q
    |||||||||||||| ||||| | ||||||||||| ||| |  | ||  |  |||||||||| ||||||||| ||||||   |||||||||||||| | ||    
T  16528624 acatcacttcagaaatagaactctatctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaaca---caattcaacccccccttct 16528528  T
Q  104 tgtgtttttctcacctt 120  Q
    |||||||||||||||||    
T  16528527 tgtgtttttctcacctt 16528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 7752044 - 7752081
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  7752044 acaattcaaccccccttcttgtgtttttctcaccttca 7752081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 12352969 - 12352932
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  12352969 acaattcaaccccccttcttgtgtttttctcaccttca 12352932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 16124339 - 16124376
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  16124339 acaattcaaccccccttcttgtgtttttctcaccttca 16124376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 19453473 - 19453510
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19453473 acaattcaaccccccttcttgtgtttttctcaccttca 19453510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 28252369 - 28252406
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  28252369 acaattcaaccccccttcttgtgtttttctcaccttca 28252406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 33353093 - 33353199
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgttt 110  Q
    |||||||||||||| | ||||||||||||| |||| | |||||| ||  ||||||||||||||||   |||   ||||||||| ||||| || |||||||    
T  33353093 cttcagaagtagaactctatctgcttctgaactgcat-tttcagttacaagaaaaagaagaaaaagaaaac---acaattcaa-cccccttcctgtgttt 33353187  T
Q  111 ttctcaccttca 122  Q
    ||||||||||||    
T  33353188 ttctcaccttca 33353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 33866535 - 33866498
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33866535 acaattcaaccccccttcttgtgtttttctcaccttca 33866498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 19625034 - 19624971
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||| ||||| ||||||||| ||||||    ||||||||||||| ||||||||||||||||||||||    
T  19625034 taggtgaaaacgaagaaaaagctaacat---aattcaaccccccgtcttgtgtttttctcaccttca 19624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 22385999 - 22385963
Alignment:
Q  86 caattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22385999 caattcaaccccccttcttgtgtttttctcaccttca 22385963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 3680411 - 3680299
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||| |||||||  ||| | ||||||||||||||| | |  |||||| ||||| |||  ||||||||||| ||||   |||||||||| ||| ||||    
T  3680411 acatcacctcagaagctgaactctatctgcttctgatcag-tgatttcag-taggataaatcgaagaaaaaacaaaca---caattcaaccacccttctt 3680317  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  3680316 gtgtttttctcaccttca 3680299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 13601479 - 13601362
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca 100  Q
    |||| ||||||||||||| |||| | ||| ||||||||||| |  | |||||| | |||||||||  |||||||| ||||||   | ||||||||||||     
T  13601479 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgt-tttcagcttaggagaaaactaagaaaaagctaaca---cgattcaacccccct 13601384  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    ||||||||| ||||||||||||    
T  13601383 tcttgtgttattctcaccttca 13601362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 20634917 - 20634878
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcag 123  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  20634917 acaattcaaccccccattcttgtgtttttctcaccttcag 20634878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 16876217 - 16876107
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||||||| |||| | ||||| || |||||| |  | |||||| || |||||||| |||||||||| ||||    |||||||||||||   ||    
T  16876217 acatcacttcagaagcagaactctatctactcctgatcagtgt-tttcagttaagagaaaaataagaaaaaacaaacat---aattcaacccccc---tt 16876125  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  16876124 gtgtttttctcaccttca 16876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19085364 - 19085327
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  19085364 acaattcaaccccccttcttgtgtttttcacaccttca 19085327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19875104 - 19875067
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| || |||||||||||||||||||    
T  19875104 acaattcaaccccccttcatgtgtttttctcaccttca 19875067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 20113473 - 20113510
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  20113473 acatcacttcagaagtagaactctatctgcttctgatc 20113510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 20731546 - 20731583
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  20731546 acatcacttcagaagtagaactctatctgcttctgatc 20731583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 21034273 - 21034236
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21034273 acaattcaacccccgttcttgtgtttttctcaccttca 21034236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 25593329 - 25593269
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||| |||||   ||||||||||||||  |||||||||||||||||||||    
T  25593329 taggagaaaacgaagaaaaaa-taaca---caattcaacccccc--cttgtgtttttctcaccttca 25593269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 31930839 - 31930802
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  31930839 acaattcaacctcccttcttgtgtttttctcaccttca 31930802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 11021350 - 11021310
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  11021350 acaattcaacccccccttcttgtgtttttctcaccttcaga 11021310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 18434819 - 18434783
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgat 41  Q
    |||||||||||||||||||| | ||||||||||||||    
T  18434819 acatcacttcagaagtagaactctatctgcttctgat 18434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 25583302 - 25583262
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  25583302 acaattcaacccccccttcttgtgtttttctcaccttcaga 25583262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 29537879 - 29537812
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccc-cccatcttgtgtttttctcaccttcagaa 125  Q
    |||||| ||| ||||||||||||||||   ||||||||||  ||| |||||||||||||||||||| ||||    
T  29537879 taggagtaaacgaagaaaaaactaaca---caattcaaccatcccttcttgtgtttttctcacctttagaa 29537812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 31571807 - 31571767
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  31571807 acaattcaacccccccttcttgtgtttttctcaccttcaga 31571767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 32335081 - 32335030
Alignment:
Q  66 agaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    |||||||||| ||||||   |||||||||||||  ||||||||||||||||||||    
T  32335081 agaagaaaaagctaaca---caattcaaccccctttcttgtgtttttctcacctt 32335030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 40850289 - 40850174
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc-atct 103  Q
    ||||| |||||||||||||| | |||| |||||||| |||| | |||||| ||||||||||||||||||||||||||   |||||||||||||||  |||    
T  40850289 acatctcttcagaagtagaactctatcggcttctgaactgcatttttcagttaggagaaaaagaagaaaaaactaac---acaattcaaccccccgttct 40850193  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  40850192 tgtgtttttctcaccttca 40850174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 21639128 - 21639237
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | |||||||||||||||||  | |||||| |||||||||||||||||||| | ||||   |||||||||||||| ||||    
T  21639128 acatctcttcagaagtagaactctatctgcttctgatctgtat-tttcagttaggagaaaaagaagaaaaagccaaca---caattcaaccccccttctt 21639223  T
Q  105 gtgtttttctcacc 118  Q
    ||||||||||||||    
T  21639224 gtgtttttctcacc 21639237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 30055022 - 30055138
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||||| |||| | |||||| |||||||||||||| |||||||||||   ||||||||||||||| | ||    
T  30055022 acatctcttcagaagtagaactctatctgcttctgaactgcatttttcagttaggagaaaaagaaaaaaaaactaac---acaattcaaccccccttttt 30055118  T
Q  105 gtg--tttttctcaccttca 122  Q
    |||  |||||||||||||||    
T  30055119 gtgtttttttctcaccttca 30055138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1241921 - 1242035
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||||||||||||||| ||||   |||||||||||| | |||    
T  1241921 acatcacttcagaagtagaaatctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaaaccaaca---caattcaaccccacttct 1242016  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  1242017 tgtgtttttctcaccttca 1242035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 46797241 - 46797354
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | |||||||||||||| ||  | |||||| |||||||||||||||||||||  ||||   || ||||||||||| ||||    
T  46797241 acatctcttcagaagtagaactctatctgcttctgatttgtat-tttcagttaggagaaaaagaagaaaaaatcaaca---cagttcaaccccccttctt 46797336  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  46797337 gtgtttttctcaccttca 46797354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 12727082 - 12727196
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||||| ||||||||||||||| | |  ||||||  |||||||||| ||| ||||| |||||   |||||||||||| || |||    
T  12727082 acatcacttcagaagtagaattctatctgcttctgatcag-tgttttcagcttaggagaaaacgaaaaaaaagctaac---acaattcaaccctccttct 12727177  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  12727178 tgtgtttttctcaccttca 12727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 14954721 - 14954607
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||| ||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||||||||||||| | ||||   |||||||||||||| |||    
T  14954721 acattacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagccaaca---caattcaaccccccttct 14954626  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  14954625 tgtgtttttctcaccttca 14954607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 49554356 - 49554470
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | |||||||||||||||    | |||||| | ||||||||||||||||||||| ||||   |||||||||||||| ||     
T  49554356 acatcacttcagaagtagaactctatctgcttctgatcaatgt-tttcagcttaggagaaaaagaagaaaaaaccaaca---caattcaaccccccttcg 49554451  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  49554452 tgtgtttttctcaccttca 49554470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 49669338 - 49669446
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg-tt 109  Q
    |||||||||||||| | ||||||||||||||||| |  |||||  |||||||||||||||||||||| |||   ||||||||||| ||| ||||||| ||    
T  49669338 cttcagaagtagaactctatctgcttctgatctg-tactttcaattaggagaaaaagaagaaaaaacgaac---acaattcaacctcccttcttgtgttt 49669433  T
Q  110 tttctcaccttca 122  Q
    |||||||||||||    
T  49669434 tttctcaccttca 49669446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 31302657 - 31302547
Alignment:
Q  8 tcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgt 106  Q
    |||||| |||||||||| | ||||||||||||||| |  | |||||| ||||||||||||||||||||||| |||   ||||||||||||||| ||||||    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgt-tttcagcataggagaaaaagaagaaaaaaccaac---acaattcaaccccccttcttgt 31302562  T
Q  107 gtttttctcaccttca 122  Q
    | ||||||||||||||    
T  31302561 g-ttttctcaccttca 31302547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 2025397 - 2025292
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgttt 110  Q
    |||||||||||||| | ||||||||||||| |||| | |||||| |||||||||||||| || |||   |||   |||||||||||||| ||||||||||    
T  2025397 cttcagaagtagaactctatctgcttctgaactgcat-tttcagttaggagaaaaagaaaaagaaa---aca---caattcaaccccccttcttgtgttt 2025305  T
Q  111 ttctcaccttcag 123  Q
    |||||||||||||    
T  2025304 ttctcaccttcag 2025292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 6090039 - 6089925
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||| || |||||| ||||||   |||||||||| ||| |||    
T  6090039 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaacgatgaaaaagctaaca---caattcaacctcccttct 6089944  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  6089943 tgtgtttttctcaccttca 6089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 22465361 - 22465439
Alignment:
Q  40 atctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||||||||| ||||||||| |||||   |||||||||||||||  |||||||||||||||||||||    
T  22465361 atctgcttgtttcagttaggagaaaaggaagaaaaagctaac---acaattcaacccccc-ccttgtgtttttctcaccttca 22465439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 29854721 - 29854607
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacc-ccccatc 102  Q
    ||||||||||||| |||||| | |||||||||||||||   ||  ||||| | ||||||||||||||||||| ||||||   |||||||||| |||| ||    
T  29854721 acatcacttcagatgtagaactctatctgcttctgatcgtgtt--ttcagtttaggagaaaaagaagaaaaagctaaca---caattcaacctccccttc 29854627  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  29854626 ttgtgtttttctcaccttca 29854607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 28581355 - 28581292
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||| ||||||   |||||||||||||  ||||||||||||||||||||||    
T  28581355 taggagaaaaagaagaaaaagctaaca---caattcaacccccattcttgtgtttttctcaccttca 28581292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 19889782 - 19889899
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca 100  Q
    |||||||||||||||||| |||| | ||| ||||||| ||| |  | |||||| | ||||||||| ||||||||| ||||||    |||||||||||||     
T  19889782 tggacatcacttcagaagcagaactctatttgcttctaatcagtgt-tttcagcttaggagaaaacgaagaaaaagctaacaa---aattcaacccccct 19889877  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||    
T  19889878 tcttgtgtttttctcaccttca 19889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 40799201 - 40799085
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccc--cccat 101  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  ||||||||||||||||||||   |||   ||||||||||||  ||| |    
T  40799201 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaaagaagaaaaagaaaac---acaattcaaccccaccctt 40799106  T
Q  102 cttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||    
T  40799105 cttgtgtttttctcaccttca 40799085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 5212870 - 5212805
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaac 77  Q
    |||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||||||||||||||    
T  5212870 cttcagaagtagaactctatctgcttctgatctg-tgttttcagttaggagaaaaagaagaaaaaac 5212805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 19888148 - 19888194
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcagaaacaact 131  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  19888148 acaattcaaccccccttcttgtgtttttctcaccttcagaatcaact 19888194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 21640143 - 21640035
Alignment:
Q  11 cttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatcttgtgtt 109  Q
    |||||||||||||| | ||||||||||||| |||| | |||||| |  |||||||||||||||||   |||   ||||||||| |||||| |||||||||    
T  21640143 cttcagaagtagaactttatctgcttctgaactgcat-tttcagttgtgagaaaaagaagaaaaagtaaac---acaattcaacccccccttcttgtgtt 21640048  T
Q  110 tttctcaccttca 122  Q
    |||||||||||||    
T  21640047 tttctcaccttca 21640035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 22804867 - 22804980
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacc-ccccatct 103  Q
    ||||||||||| |||||||| | ||||||||||||||| |  | ||  |  |||||||||| |||||||||||||     ||||||||||| |||| |||    
T  22804867 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaaacta-----acaattcaacctccccttct 22804961  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  22804962 tgtgtttttctcaccttca 22804980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 50299549 - 50299431
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaa-aactaacagtacaattcaaccccccatct 103  Q
    |||||| ||||||||||||| | ||||||||||||||| |  | ||  |  ||||||||||||||||||| ||  || |  ||||||||||||||| |||    
T  50299549 acatcagttcagaagtagaaatctatctgcttctgatcagtgttttcaacttaggagaaaaagaagaaaagaaaaaaaaacacaattcaaccccccttct 50299450  T
Q  104 tgtgtttttctcaccttca 122  Q
    | |||||||||||||||||    
T  50299449 tatgtttttctcaccttca 50299431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 14968680 - 14968561
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-----ccccc 98  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||||||||||||| | |||   |||||||||     |||||    
T  14968680 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaaagaagaaaaagccaac---acaattcaacccctccccc 14968585  T
Q  99 catcttgtgtttttctcaccttca 122  Q
    | ||||||||||||||||||||||    
T  14968584 cttcttgtgtttttctcaccttca 14968561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 29952283 - 29952400
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa---cccccca 100  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| ||||||||| |||||   |||||||||   ||||||     
T  29952283 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaagctaac---acaattcaacccccccccc 29952378  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    |||||||||||| |||||||||    
T  29952379 tcttgtgtttttgtcaccttca 29952400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 30001437 - 30001554
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa---cccccca 100  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| ||||||||| |||||   |||||||||   ||||||     
T  30001437 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaagctaac---acaattcaacccccccccc 30001532  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    |||||||||||| |||||||||    
T  30001533 tcttgtgtttttgtcaccttca 30001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 52283106 - 52282991
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatc 102  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||||||| |||||   |||   ||||||||| |||||| ||    
T  52283106 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaaagaataaaaagtcaac---acaattcaacccccccttc 52283011  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  52283010 ttgtgtttttctcaccttca 52282991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 3237961 - 3237890
Alignment:
Q  49 tttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    |||||| ||| |||||| | ||||||| ||||||   |||||||||||||| |||||||||||||||||||||||    
T  3237961 tttcagttagaagaaaatgtagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttcag 3237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 15902455 - 15902393
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||| ||||||   |||||||||||||  ||||||||||||||||||||||    
T  15902455 taggagaaaaagaagaaaaagctaaca---caattcaaccccct-tcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 17960842 - 17960802
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcagaa 125  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  17960842 acaattcaaccccccttcttgtgtttttctcaccttcagaa 17960802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 20628308 - 20628398
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccc 98  Q
    |||||||||||||||||||| | |||||||||||||||  ||  ||||||  |||||||||||||||||||| |||||   ||||||||||||||    
T  20628308 acatcacttcagaagtagaactctatctgcttctgatc-actgttttcagcttaggagaaaaagaagaaaaagctaac---acaattcaaccccc 20628398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 23539122 - 23539185
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||| |||| ||||||||||||||||   |||||||||| ||| ||||||||||||||||||||||    
T  23539122 taggaaaaaacgaagaaaaaactaaca---caattcaacctcccttcttgtgtttttctcaccttca 23539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 12963984 - 12964046
Alignment:
Q  57 aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||| ||||||||| ||||||   ||||||||||| || ||||||||||||||||||||||    
T  12963984 aggagaaaatgaagaaaaagctaaca---caattcaaccctccttcttgtgtttttctcaccttca 12964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 13823379 - 13823266
Alignment:
Q  7 atcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttg 105  Q
    |||||||||||| ||||| | ||||||||||||||| |  | |||| | | ||||||||||||||||||| | ||||   |||||||||||||| |||||    
T  13823379 atcacttcagaattagaactttatctgcttctgatcagtgt-tttcggcttaggagaaaaagaagaaaaatccaaca---caattcaaccccccttcttg 13823284  T
Q  106 tgtttt-tctcaccttca 122  Q
    |||||| |||||||||||    
T  13823283 tgttttctctcaccttca 13823266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 17910800 - 17910838
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17910800 acaattcaaccccccttcttgtgtttttctcaccttcag 17910838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 28165417 - 28165379
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  28165417 acaattcaaccccccttcttgtgtttttctcaccttcag 28165379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 4433201 - 4433164
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4433201 acaattcaaccccccttcttgtgtttttctcaccttca 4433164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 15663532 - 15663569
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15663532 acaattcaaccccccttcttgtgtttttctcaccttca 15663569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 17667630 - 17667566
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaacccccc-atcttgtgtttttctcaccttca 122  Q
    |||||||||| |||||||||||||||   |||||||||||||||  |||| |||||||||||||||||    
T  17667630 taggagaaaatgaagaaaaaactaac---acaattcaaccccccgttcttttgtttttctcaccttca 17667566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 19250285 - 19250349
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    |||||||||| |||| |||| ||||||   |||||||||||| | |||||||||||||||||||||||    
T  19250285 taggagaaaacgaagtaaaagctaaca---caattcaacccctcttcttgtgtttttctcaccttcag 19250349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 21735613 - 21735576
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21735613 acaattcaaccccccttcttgtgtttttctcaccttca 21735576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 22150441 - 22150404
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22150441 acaattcaaccccccttcttgtgtttttctcaccttca 22150404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 41044937 - 41044900
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  41044937 acaattcaaccccccctcttgtgtttttctcaccttca 41044900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 2560419 - 2560383
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttc 121  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2560419 acaattcaaccccccttcttgtgtttttctcaccttc 2560383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 11189253 - 11189191
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||| |||   ||||||||| | ||| ||||||||||||||||||||||    
T  11189253 taggagaaaaagaagaaaaaaccaac---acaattcaa-cacccttcttgtgtttttctcaccttca 11189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 12967574 - 12967511
Alignment:
Q  57 aggagaaaaagaagaaaaaactaacagtacaattcaac-cccccatcttgtgtttttctcaccttca 122  Q
    ||||||||| ||||||||| ||||||   ||||||||| ||||| ||||||||||||||||||||||    
T  12967574 aggagaaaacgaagaaaaagctaaca---caattcaactcccccttcttgtgtttttctcaccttca 12967511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 14393841 - 14393956
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaac-cccccatct 103  Q
    |||||||||||||||||||| | ||| | ||||||||| |  | ||  |  |||||||||| ||||||||| ||||||   ||||||||| ||||| |||    
T  14393841 acatcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagctaaca---caattcaacgcccccttct 14393937  T
Q  104 tgtgtttttctcaccttca 122  Q
    ||| |||||||||||||||    
T  14393938 tgtatttttctcaccttca 14393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 19885924 - 19886038
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||| ||||||||||  |  | |||||| | ||||||||| |||||||||  |||||   || ||||||||||| | |    
T  19885924 acatcacttcagaagtagaactctatttgcttctgataagtgt-tttcagcttaggagaaaacgaagaaaaagataaca---catttcaacccccctttt 19886019  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  19886020 tgtgtttttctcaccttca 19886038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 52919684 - 52919622
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||||||||||   ||||||| |||||  ||||||||||||||||||||||    
T  52919684 taggagaaaacgaagaaaaaactaaca---caattcagccccct-tcttgtgtttttctcaccttca 52919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 12410636 - 12410675
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcag 123  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  12410636 acaattcaaccccccattcttgtgtttttctcaccttcag 12410675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 24707352 - 24707391
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  24707352 acaattcaaccccccttcttgtgtttttctaaccttcaga 24707391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 9994687 - 9994729
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcagaaac 127  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||    
T  9994687 acaattcaaccccccttcttatgtttttctcaccttcaaaaac 9994729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 22770761 - 22770814
Alignment:
Q  66 agaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||   || ||||||||||| ||||||||||||||||||||||    
T  22770761 agaagaaaaagctaaca---cacttcaaccccccttcttgtgtttttctcaccttca 22770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1728887 - 1728943
Alignment:
Q  40 atctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||||||||||||||||||||||| | ||||||||  ||||   |||||||||||||||    
T  1728887 atctgcttgtttcagataggagaaagaaaagaaaaagttaac---acaattcaacccccc 1728943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 2782797 - 2782760
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  2782797 acatcacttcagaagtagaattctatctgattctgatc 2782760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 2783187 - 2783150
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  2783187 acatcacttcagaagtagaattctatctgattctgatc 2783150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 4403710 - 4403677
Alignment:
Q  89 ttcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||||||||||||||||||||||    
T  4403710 ttcaaccccccttcttgtgtttttctcaccttca 4403677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 8875022 - 8875086
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaacccc-ccatcttgtgtttttctcaccttca 122  Q
    ||||| |||| ||||||||||| ||||   |||||||||||| || ||||||||||||||||||||||    
T  8875022 taggaaaaaacgaagaaaaaaccaaca---caattcaacccctccttcttgtgtttttctcaccttca 8875086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 13601674 - 13601637
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  13601674 acaattcaaccccccttcttgtgtttttcacaccttca 13601637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 16076369 - 16076336
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcacc 118  Q
    ||||||||||||||| ||||||||||||||||||    
T  16076369 acaattcaaccccccttcttgtgtttttctcacc 16076336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 24776358 - 24776395
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  24776358 acatcacttcagaagtagaactctatctgcttctgatc 24776395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 33582452 - 33582415
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  33582452 acaattcaaccccccttcttgtgtttttatcaccttca 33582415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 47206974 - 47206937
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatc 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  47206974 acatcacttcagaagtagaactctatctgcttctgatc 47206937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 53057648 - 53057685
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  53057648 acaattcaaccccctttcttgtgtttttctcaccttca 53057685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 13200043 - 13200083
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  13200043 acaattcaacccccccttcttgtgtttttctcaccttcaga 13200083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 25399101 - 25399137
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgat 41  Q
    |||||||||||||||||||| | ||||||||||||||    
T  25399101 acatcacttcagaagtagaactctatctgcttctgat 25399137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 27849483 - 27849428
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    |||||||||||||| ||||   ||||||||||||||   ||||||||||||||||||||    
T  27849483 aaaaagaagaaaaagctaa---tacaattcaacccctattcttgtgtttttctcacctt 27849428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 38194161 - 38194121
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  38194161 acaattcaacccccccttcttgtgtttttctcaccttcaga 38194121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 40859977 - 40859900
Alignment:
Q  42 ctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||||||||||||||| |||||   ||||||||||||||| ||||||||||||||||||||||    
T  40859977 ctgcttgtttcagataggagaaaaagaagaaaaagctaac---acaattcaaccccccttcttgtgtttttctcaccttca 40859900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 38513215 - 38513105
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag--aagaaaaaactaacagtacaattcaaccccccatcttgtg-t 108  Q
    ||||||||||||| | ||||||||||||| ||||||||||||| ||||||||||||  |||||||| |||||   ||||||||||||||| ||||||| |    
T  38513215 ttcagaagtagaactctatctgcttctgaactgcttgtttcagttaggagaaaaagaaaagaaaaagctaac---acaattcaaccccccttcttgtgtt 38513119  T
Q  109 ttttctcaccttca 122  Q
    ||||||||||||||    
T  38513118 ttttctcaccttca 38513105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 3500455 - 3500565
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | |||||||||  || ||||||||||||||||||||||| | ||||||||  ||||   ||||||||||||||| ||||    
T  3500455 acatcccttcagaagtagaactctatctgctttcgacctgcttgtttcagataggagaaagaaaagaaaaagttaac---acaattcaaccccccttctt 3500551  T
Q  105 gtgtttttctcacc 118  Q
    ||||||||||||||    
T  3500552 gtgtttttctcacc 3500565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 17399482 - 17399596
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||||||||||| | |||||||||||||  ||| | |||||| |||||||||||||||||||| |||||   ||||||||| |||||| |||    
T  17399482 acatctcttcagaagtagaactctatctgcttctgaattgcat-tttcagttaggagaaaaagaagaaaaacctaac---acaattcaacccccccttct 17399577  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  17399578 tgtgtttttctcaccttca 17399596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 19611171 - 19611288
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgttt-cagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||| ||||||||||||| |||| | ||| |||||||||||||  ||||| ||| | ||||||||| ||||||||||||||||   ||||||||||||||    
T  19611171 tggaaatcacttcagaagcagaactctatgtgcttctgatctg--tgtttacagtttaggagaaaacgaagaaaaaactaaca---caattcaacccccc 19611265  T
Q  100 atcttgtgtttttctcaccttca 122  Q
     ||||||||||||||||||||||    
T  19611266 ttcttgtgtttttctcaccttca 19611288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 3106218 - 3106329
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||||| |||| | |||||| |||||||||||||||||||| |||||   |||||||||  |||| ||||    
T  3106218 acatctcttcagaagtagaactctatctgcttctgaactgcat-tttcagttaggagaaaaagaagaaaaagctaac---acaattcaa--ccccttctt 3106311  T
Q  105 gtgtttttctcaccttca 122  Q
    |||||||||| |||||||    
T  3106312 gtgtttttcttaccttca 3106329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 20976756 - 20976646
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag--aagaaaaaactaacagtacaattcaa-ccccccatcttgtgt 108  Q
    |||| |||||||| | ||||||||||||| ||||||||||||| ||||||||||||  |||||||| | |||   ||||||||| |||||| ||||||||    
T  20976756 ttcaaaagtagaactctatctgcttctgaactgcttgtttcagttaggagaaaaagaaaagaaaaagcaaac---acaattcaacccccccttcttgtgt 20976660  T
Q  109 ttttctcaccttca 122  Q
    ||||||||||||||    
T  20976659 ttttctcaccttca 20976646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 54679168 - 54679050
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||| ||||| |  | |||||| | |||||||||||||||||||   ||||   |||||||||||||| |||    
T  54679168 acatcacttcagaagtagaactctatctgcttttgatcagtgt-tttcagcttaggagaaaaagaagaaaaagaaaaca---caattcaaccccccttct 54679073  T
Q  104 tgtgtttttctcaccttcagaaa 126  Q
    ||||||||||||||| |||||||    
T  54679072 tgtgtttttctcaccatcagaaa 54679050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 37436332 - 37436445
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||||||||| |||||||| | ||||||||||||||| |  | ||  | ||||||||||||||||||||| | ||||   ||||| |||||||| ||||    
T  37436332 acatcacttcataagtagaactctatctgcttctgatcagtgttttcaacataggagaaaaagaagaaaaacc-aaca---caatttaaccccccttctt 37436427  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  37436428 gtgtttttctcaccttca 37436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 56033835 - 56033722
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaacccccca-tc 102  Q
    |||||||||||||||||||| | ||||||||||||||  |  | |||||| | ||||||||||||||||||||| |||   |||||||||||| ||| ||    
T  56033835 acatcacttcagaagtagaactctatctgcttctgataagtgt-tttcagcttaggagaaaaagaagaaaaaaccaac---acaattcaaccctccattc 56033740  T
Q  103 ttgtgtttttctcacctt 120  Q
    ||||||||||||||||||    
T  56033739 ttgtgtttttctcacctt 56033722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 9752351 - 9752464
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaa-----gaaaaaactaacagtacaattcaaccccccat-cttg 105  Q
    ||||||||||||| | ||||||||||||| || ||||||| ||  |||||||||||||     |||||| ||||||   |||||||||||||||| ||||    
T  9752351 ttcagaagtagaactctatctgcttctgaactacttgttttagtcaggagaaaaagaaaagaagaaaaagctaaca---caattcaaccccccattcttg 9752447  T
Q  106 tgtttttctcaccttca 122  Q
    |||||||||||||||||    
T  9752448 tgtttttctcaccttca 9752464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 14605707 - 14605823
Alignment:
Q  5 acatcacttcagaa-gtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccat 101  Q
    |||||||||||||| |||||||||||||||||||||||| | |  ||||||  |||||||||| ||| ||||| |||||   ||||||||| |||||| |    
T  14605707 acatcacttcagaaagtagaattatatctgcttctgatcag-tgttttcagcttaggagaaaacgaataaaaagctaac---acaattcaatcccccctt 14605802  T
Q  102 cttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||    
T  14605803 cttgtgtttttctcaccttca 14605823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 29120675 - 29120559
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-c 102  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||| | ||||||||||||||| ||| | ||||   |||||||||||||| | |    
T  29120675 acatcacttcagaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagagaaagccaaca---caattcaacccccccttc 29120580  T
Q  103 ttgtgtttttctcaccttcag 123  Q
    |||||||||||||||||||||    
T  29120579 ttgtgtttttctcaccttcag 29120559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 22676362 - 22676475
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||| |||||||| | ||||||||||||||| |  | |||||| | ||||||||||||||||||| | ||||   ||||||| |||||| |||    
T  22676362 acatcacttcaaaagtagaactctatctgcttctgatcagtgt-tttcagcttaggagaaaaagaagaaaaagccaaca---caattca-ccccccttct 22676456  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  22676457 tgtgtttttctcaccttca 22676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 24628699 - 24628814
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaac-cccccatc 102  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| ||||||||| |||||   |||||||||| || || ||    
T  24628699 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaagctaac---acaattcaactcctccttc 24628794  T
Q  103 ttgtgtttttctcaccttca 122  Q
    |||| |||||||||||||||    
T  24628795 ttgtatttttctcaccttca 24628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 6516791 - 6516701
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| |||||||||||||| ||||| | |||   |||||||||||||||    
T  6516791 acatctcttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaaagaataaaaagccaac---acaattcaacccccc 6516701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 13576950 - 13577064
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| |  | ||||||  ||||||||||||||  |||| | |||   ||||||||||| ||| |||    
T  13576950 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaac---acaattcaaccgcccttct 13577045  T
Q  104 tgtgtttttctcaccttca 122  Q
    || ||||||||||||||||    
T  13577046 tgcgtttttctcaccttca 13577064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 39420515 - 39420571
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaaga 68  Q
    ||||||||| ||||| ||||||||||||| |||||||||| || |||||||||||||    
T  39420515 ttcagaagtggaattctatctgcttctgaactgcttgttttagttaggagaaaaaga 39420571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 31267590 - 31267629
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  31267590 acaattcaaccccccttcttgtgtttttctcaccttcaga 31267629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 12600060 - 12599948
Alignment:
Q  7 atcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttg 105  Q
    |||||||||||||||||| | ||| ||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||| ||||| ||||     
T  12600060 atcacttcagaagtagaactttatttgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaagctaaca---caattcaatcccccttctta 12599965  T
Q  106 tgtttttctcaccttca 122  Q
    |||||||||||| ||||    
T  12599964 tgtttttctcacattca 12599948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 15134972 - 15134915
Alignment:
Q  59 gagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacct 119  Q
    ||||||| ||||||| ||||||||   |||||||||||||| |||||||||||||||||||    
T  15134972 gagaaaacgaagaaataactaaca---caattcaaccccccttcttgtgtttttctcacct 15134915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 16852779 - 16852710
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaa 75  Q
    |||| ||||||||||||||| | ||||||||||||||| | |  ||||| |||||||||||||||||||||    
T  16852779 acattacttcagaagtagaactttatctgcttctgatcag-tattttcaaataggagaaaaagaagaaaaa 16852710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 18773339 - 18773282
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||   | |||||||||||  ||||||||||||||||||||||    
T  18773339 aaaaagaagaaaaaactaaca---cgattcaaccccctttcttgtgtttttctcaccttca 18773282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 33377600 - 33377562
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33377600 acaattcaaccccccttcttgtgtttttctcaccttcag 33377562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 5872833 - 5872796
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5872833 acaattcaaccccccttcttgtgtttttctcaccttca 5872796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 11514496 - 11514459
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11514496 acaattcaaccccccttcttgtgtttttctcaccttca 11514459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 14154869 - 14154906
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14154869 acaattcaaccccccctcttgtgtttttctcaccttca 14154906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 14836902 - 14836939
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14836902 acaattcaaccccccttcttgtgtttttctcaccttca 14836939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 14905127 - 14905242
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatc 102  Q
    |||||||||||||||||||| | |||||||||||||||   |  ||||||  |||||||||||||||||||| | |||   ||||||||| |||||| |     
T  14905127 acatcacttcagaagtagaactctatctgcttctgatc-aatgttttcagcttaggagaaaaagaagaaaaagccaac---acaattcaatccccccttg 14905222  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||| ||||||||    
T  14905223 ttgtgtttttcccaccttca 14905242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 16631695 - 16631631
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccc-catcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||||| ||||   ||||||||||||| | ||||||||||||||||||||||    
T  16631695 taggagaaaaggaagaaaaaaccaaca---caattcaaccccctcttcttgtgtttttctcaccttca 16631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19570477 - 19570440
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19570477 acaattcaaccccccttcttgtgtttttctcaccttca 19570440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 41115618 - 41115728
Alignment:
Q  7 atcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgt 106  Q
    |||||||||||||  ||| | ||||||||||||||| ||   || ||| |||||||||| |||||||||  |||||   |||||||| ||||| ||||||    
T  41115618 atcacttcagaagctgaactctatctgcttctgatcagcgactt-cag-taggagaaaacgaagaaaaagttaaca---caattcaaacccccttcttgt 41115712  T
Q  107 gtttttctcaccttca 122  Q
    ||||||||||||||||    
T  41115713 gtttttctcaccttca 41115728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 55379619 - 55379504
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||| |||| ||||||| ||   ||||||||| ||||| ||     
T  55379619 acatcacttcagaagtagaactttatctgcttctgatcag-tgttttcagcttaggagaaaatgaaggaaaaactcac---acaattcaaacccccttcc 55379524  T
Q  104 tgtg-tttttctcaccttca 122  Q
    |||| |||||||||||||||    
T  55379523 tgtgttttttctcaccttca 55379504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 3792640 - 3792527
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    |||||||||||||||||||| | ||||||||||| | | |  | |||||| | ||||||||||||||||||| | ||||   |||||||||||||  |||    
T  3792640 acatcacttcagaagtagaactctatctgcttctaagcagtgt-tttcagcttaggagaaaaagaagaaaaagccaaca---caattcaacccccg-tct 3792546  T
Q  104 tgtgtttttctcaccttca 122  Q
    || ||||||||||||||||    
T  3792545 tgcgtttttctcaccttca 3792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 17246917 - 17246846
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaa 76  Q
    |||||||||||||||||||| | ||||||||||||||| | |  ||||||  |||||||||||||||||||||    
T  17246917 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagcttaggagaaaaagaagaaaaaa 17246846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 17701566 - 17701622
Alignment:
Q  12 ttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaaga 68  Q
    ||||||||| ||| | ||||||||||||| || |||||||||| |||||||||||||    
T  17701566 ttcagaagtggaactctatctgcttctgaactacttgtttcagttaggagaaaaaga 17701622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 19884000 - 19883909
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||||||| |||||| ||||| ||||||||||||||  |  | |||    ||||||||||||||||||||||||||   |||||||||||||||    
T  19884000 acatcacttaagaagtggaattctatctgcttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaac---acaattcaacccccc 19883909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 24618944 - 24618885
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||| || ||||||   |||||||||| ||| ||||||||||||||||||||||||    
T  24618944 aaaaagaagaataagctaaca---caattcaaccgcccttcttgtgtttttctcaccttcaga 24618885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 6640945 - 6640891
Alignment:
Q  59 gagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctca 116  Q
    ||||||| ||||||||| ||||||   |||||||||||||| ||||||||||||||||    
T  6640945 gagaaaacgaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctca 6640891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 10072146 - 10072079
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccc----catcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||| ||||||   |||||||||||||    | ||||||||||||||||||||||    
T  10072146 taggagaaaaagaagaaaaagctaaca---caattcaaccccctccccttcttgtgtttttctcaccttca 10072079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 13027020 - 13026985
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcacctt 120  Q
    ||||||||||||||| ||||||||||||||||||||    
T  13027020 acaattcaaccccccttcttgtgtttttctcacctt 13026985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 17527237 - 17527295
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    |||||||||||||| ||||||   ||||||||||| || |||| ||||||||||||||||||    
T  17527237 aaaaagaagaaaaagctaaca---caattcaacccgccttcttttgtttttctcaccttcag 17527295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 20571887 - 20571926
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  20571887 acaattcaaccccccttcttttgtttttctcaccttcaga 20571926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 49002779 - 49002818
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  49002779 acaattcaacccccattcttgtgtttttctcaccttcaga 49002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 13890087 - 13890030
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   |||||||||||||| |||| | |||||||||||||||    
T  13890087 aaaaagaagaaaaatctaaca---caattcaaccccccttcttttatttttctcaccttca 13890030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 14711619 - 14711657
Alignment:
Q  85 acaattcaacccc-ccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  14711619 acaattcaacccccccatcttgtgtttttctcaccttca 14711657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 21810758 - 21810796
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  21810758 acaattcaaccccccttcttatgtttttctcaccttcag 21810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 22089514 - 22089473
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcagaaac 127  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  22089514 acaattcaaccccct-tcttgtgtttttctcaccttcagaaac 22089473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 15560500 - 15560463
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  15560500 acaattcaaccccccttcttgtgtttttttcaccttca 15560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 16325353 - 16325413
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    |||||||||||||||||||||   ||||| |||||||| | ||||||||| |||||||||||||    
T  16325353 aaaaagaagaaaaaactaaca---caatttaacccccccttcttgtgtttatctcaccttcaga 16325413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 21546542 - 21546579
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  21546542 acaattcaacctcccttcttgtgtttttctcaccttca 21546579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 25656592 - 25656555
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  25656592 acaattcaaccccccttcttgtgtttttcacaccttca 25656555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 56533866 - 56533899
Alignment:
Q  89 ttcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||||||||||||||||||||||    
T  56533866 ttcaaccccccttcttgtgtttttctcaccttca 56533899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 88398 - 88518
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaa-gaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||| |||||||||||||| | ||||||||||||| ||||||||||||| || || ||||| |||||||||  |||||   |||||||||||||| |||    
T  88398 acatctcttcagaagtagaactctatctgcttctgaactgcttgtttcagttaagaaaaaaaagaagaaaaagttaaca---caattcaaccccccttct 88494  T
Q  104 tgtgtttttctcaccttcagaaac 127  Q
    ||||||||||||||||||| ||||    
T  88495 tgtgtttttctcaccttcataaac 88518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 2767 - 2650
Alignment:
Q  2 tggacatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccat 101  Q
    |||||||| |||||||||||||| |  ||||||||||||||||  | |||||| |||||||||| ||||||||| | ||||   |||||||||||||| |    
T  2767 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgt-tttcagttaggagaaaatgaagaaaaagccaaca---caattcaacccccctt 2672  T
Q  102 cttgtgtttttctcaccttcag 123  Q
    ||||||||||||||||||||||    
T  2671 cttgtgtttttctcaccttcag 2650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 7509 - 7623
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||||||| | ||||||||||||||| | |  |||||| |||||||||||||||||||| | |||   ||||||||||||||| ||||    
T  7509 acatcacttcagaagtagaactctatctgcttctgatcag-tgttttcagttaggagaaaaagaagaaaaagccaac---acaattcaaccccccttctt 7604  T
Q  105 gtg-tttttctcaccttca 122  Q
    ||| |||||||||||||||    
T  7605 gtgttttttctcaccttca 7623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 6067 - 6158
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||  ||||   |||||||||||||||    
T  6067 acatctcttcagaagtagaattctatctgcttctgacctgcttgtttcagataggagaaagaaaagaaaaagttaac---acaattcaacccccc 6158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 26449 - 26564
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| ||||||||||| || | |||||| |||||| |||| | |||||| |||||||||||||||||||| |||||   ||||||||| |||||| |||    
T  26449 acatctcttcagaagtataactctatctgtttctgaactgcatttttcagttaggagaaaaagaagaaaaagctaac---acaattcaacccccccttct 26545  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  26546 tgtgtttttctcaccttca 26564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 35543 - 35620
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaaca 82  Q
    ||||| |||||||||||||| | ||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||    
T  35543 acatctcttcagaagtagaactctatctgcttctgaactgcatttttcagttaggagaaaaagaagaaaaagctaaca 35620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 752 - 868
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatct 103  Q
    ||||||||||||||||||||||  |||||||||||||| |  | |||||| | |||||||| ||||||||||  |||||   |||||||||||||| |||    
T  752 acatcacttcagaagtagaattccatctgcttctgatcagtgt-tttcagcttaggagaaatagaagaaaaagttaaca---caattcaaccccccttct 847  T
Q  104 tgtgtttttctcaccttcaga 124  Q
    |||||||||||||||||||||    
T  848 tgtgtttttctcaccttcaga 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1617 - 1735
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaag---aagaaaaaactaacagtacaattcaa-cccccca 100  Q
    ||||| |||||||||||||| | ||||||||||||| ||||||||||||| |||||  |||||   |||||||| |||||   ||||||||| ||||||     
T  1617 acatctcttcagaagtagaactctatctgcttctgaactgcttgtttcagttaggatgaaaagattaagaaaaacctaac---acaattcaaccccccct 1713  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||    
T  1714 tcttgtgtttttctcaccttca 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 18559 - 18672
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||| ||||||| |||| | |||||| ||||||||||||||| |||||| ||||    |||||||||| || ||||    
T  18559 acatctcttcagaagtagaactctatctacttctgaactgcat-tttcagttaggagaaaaagaagcaaaaacaaacat---aattcaaccctccttctt 18654  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  18655 gtgtttttctcaccttca 18672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 210715 - 210603
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||| |||||||| | |||   ||||||||| ||||| ||||    
T  210715 acatctcttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaaacaagaaaaagccaac---acaattcaa-cccccttctt 210621  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  210620 gtgtttttctcaccttca 210603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 110392 - 110509
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccc----cca 100  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| |||||||||| ||||||||||| |||   |||||||||||||    ||     
T  110392 acatctcttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaacgaagaaaaaaccaac---acaattcaaccccccctcct 110487  T
Q  101 tcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||||    
T  110488 tcttgtgtttttctcaccttca 110509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 20267 - 20376
Alignment:
Q  7 atcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgt 106  Q
    ||||||||||||| |||| | ||| | ||||||||| | || |||    |||||||||| |||||||||||||||   ||||||||| ||||| |||| |    
T  20267 atcacttcagaagcagaactctatttacttctgatcagtttttttagcttaggagaaaacgaagaaaaaactaac---acaattcaa-cccccttctttt 20362  T
Q  107 gtttttctcacctt 120  Q
    ||||||||||||||    
T  20363 gtttttctcacctt 20376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 16514 - 16627
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||||||||||||||||   |||   | ||||||| |||||| |||    
T  16514 acatctcttcagaagtagaattttatctgcttctgatctg--tttttcagttaggagaaaaagaagaaaaaggcaac---aaaattcaacccccccctct 16608  T
Q  104 tgtgtttttctcaccttca 122  Q
    ||||||| |||||||||||    
T  16609 tgtgtttatctcaccttca 16627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 932 - 817
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattc-aaccccccatc 102  Q
    |||||||||||||||||||||| ||||||||||||||| | |  ||||||  |||||||||| |||||||||  ||||   ||||||| |||||||| ||    
T  932 acatcacttcagaagtagaattctatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaagttaac---acaattcaaaccccccttc 837  T
Q  103 ttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||    
T  836 ttgtgtttttctcaccttca 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 145249 - 145363
Alignment:
Q  6 catcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccc--ccatct 103  Q
    |||| |||||||||||||| | |||||||||||||||| | | |||||| ||| |||||||||||||||| | |||   |||||||||||||  || |||    
T  145249 catctcttcagaagtagaactctatctgcttctgatctacat-tttcagttagaagaaaaagaagaaaaagccaac---acaattcaaccccatccttct 145344  T
Q  104 tgtgtttttctcaccttca 122  Q
    |||||||||||||||||||    
T  145345 tgtgtttttctcaccttca 145363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 66206 - 66295
Alignment:
Q  6 catcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaacccccc 99  Q
    |||| ||| |||||||||| | |||||||||||||||||| | |||||| |||||||||||||||||||| | |||   |||||||||||||||    
T  66206 catctctttagaagtagaactctatctgcttctgatctgcat-tttcagttaggagaaaaagaagaaaaagccaac---acaattcaacccccc 66295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 250901 - 250845
Alignment:
Q  63 aaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||||||||   |||||||||| | | ||||||||||||||||||||||    
T  250901 aaaagaagaaaaaactaaca---caattcaacctctcttcttgtgtttttctcaccttca 250845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 2280 - 2164
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgt-ttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatc 102  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||| ||||| | |||||||||||||||||||   ||||   |||||||||||| | ||    
T  2280 acatcacttcagaagtagaactctatctgcttctgatcag--tgtattcagcttaggagaaaaagaagaaaaagaaaaca---caattcaaccccacttc 2186  T
Q  103 ttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||||||||||    
T  2185 ttgtgtttttctcaccttcaga 2164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 13303 - 13191
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaaccccccatctt 104  Q
    |||||||||||||||| ||| | ||||||||||||||| | |   ||||| |||||||||| ||||||||| ||||||   |||||||||||||| | ||    
T  13303 acatcacttcagaagttgaactctatctgcttctgatcag-tgacttcag-taggagaaaacgaagaaaaagctaaca---caattcaaccccccttttt 13209  T
Q  105 gtgtttttctcaccttca 122  Q
    ||||||||||||||||||    
T  13208 gtgtttttctcaccttca 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 22956 - 23071
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||||||||||| | ||||||||| ||||||| |  |||||| ||||||||||||||| |||| | |||   ||||||||| |||||| |||    
T  22956 acatctcttcagaagtagaactctatctgcttttgatctg-tattttcagttaggagaaaaagaag-aaaagccaac---acaattcaacccccccttct 23050  T
Q  104 tgtgtttttctcaccttcaga 124  Q
    |||||||||||||||||||||    
T  23051 tgtgtttttctcaccttcaga 23071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 211671 - 211555
Alignment:
Q  5 acatcacttcagaa-gtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccat 101  Q
    |||||||||||||| |||||||||||||||||||||||| | |  ||||||  |||||||||| ||| ||||| |||||   ||||||||| |||||| |    
T  211671 acatcacttcagaaagtagaattatatctgcttctgatcag-tgttttcagcttaggagaaaacgaataaaaagctaac---acaattcaatcccccctt 211576  T
Q  102 cttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||||    
T  211575 cttgtgtttttctcaccttca 211555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 9277 - 9158
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcag-ataggagaaaaagaagaaaaaactaacagtacaattcaacccc-----c 98  Q
    |||||||||||||||||||||| ||||||||||||||| | |  ||||||  |||||||||| ||||||||| |||||   |||||||||||||     |    
T  9277 acatcacttcagaagtagaattctatctgcttctgatcag-tgttttcagcttaggagaaaacgaagaaaaagctaac---acaattcaaccccctaggc 9182  T
Q  99 catcttgtgtttttctcaccttca 122  Q
    | ||||||||||||||||||||||    
T  9181 cttcttgtgtttttctcaccttca 9158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 3483 - 3598
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatct 103  Q
    ||||| |||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||||||||||||   |||   ||||||||| |||||| |||    
T  3483 acatctcttcagaagtagaactctatctgcttctgatctg-tattttcagttaggagaaaaagaagaaaaagaaaac---acaattcaacccccccttct 3578  T
Q  104 tgtg-tttttctcaccttca 122  Q
    |||| |||||||||||||||    
T  3579 tgtgttttttctcaccttca 3598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 31849 - 31786
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  31849 taggagaaaacgaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttca 31786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 48576 - 48512
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccat-cttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||||||| | |||||||||||||| ||||||    
T  48576 taggagaaaatgaagaaaaagctaaca---caattcaacccccccttcttgtgtttttctctccttca 48512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 36689 - 36626
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  36689 taggagaaaacgaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttca 36626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 134749 - 134686
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||    
T  134749 taggagaaaacgaagaaaaagctaaca---caattcaaccccccttcttgtgtttttctcaccttca 134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 7976 - 7866
Alignment:
Q  9 cacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg 107  Q
    |||||||||||| ||| | ||||||||||||||| |  | |||||| | ||||||||| ||||||||| ||||||   |||||||||||| | |||| ||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgt-tttcagcttaggagaaaacgaagaaaaagctaaca---caattcaacccctcttcttatg 7881  T
Q  108 tttttctcaccttca 122  Q
    |||||||||||||||    
T  7880 tttttctcaccttca 7866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 102866 - 102752
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaacagtacaattcaac-cccccatc 102  Q
    |||||||||||||||||||| | ||||||||| ||||| |  | |||||| | ||||||||| |||||||||  |||   ||||||||||| ||||| ||    
T  102866 acatcacttcagaagtagaactctatctgcttatgatcagtgt-tttcagcttaggagaaaacgaagaaaaagttaa---tacaattcaacacccccttc 102771  T
Q  103 ttgtgtttttctcaccttc 121  Q
    |||||||||||||||||||    
T  102770 ttgtgtttttctcaccttc 102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 7191 - 7230
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7191 acaattcaaccccccttcttgtgtttttctcaccttcaga 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 1900 - 1862
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcag 123  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1900 acaattcaaccccccttcttgtgtttttctcaccttcag 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 63587 - 63534
Alignment:
Q  64 aaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcacctt 120  Q
    |||||||||||||| ||||   |||||||||||||| ||||||||||||||||||||    
T  63587 aaagaagaaaaaacaaaca---caattcaaccccccttcttgtgtttttctcacctt 63534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 1595 - 1558
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1595 acaattcaaccccccctcttgtgtttttctcaccttca 1558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 651 - 614
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  651 acaattcaaccccccttcttgtgtttttctcaccttca 614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 5636 - 5673
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5636 acaattcaaccccccctcttgtgtttttctcaccttca 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 3054 - 3091
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3054 acaattcaaccccccttcttgtgtttttctcaccttca 3091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 21812 - 21849
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21812 acaattcaaccccccttcttgtgtttttctcaccttca 21849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 11440 - 11477
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11440 acaattcaaccccccttcttgtgtttttctcaccttca 11477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 33736 - 33773
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33736 acaattcaaccccccttcttgtgtttttctcaccttca 33773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 52569 - 52606
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  52569 acaattcaaccccccttcttgtgtttttctcaccttca 52606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 50544 - 50480
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaac-cccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||||||||||    |||||||| ||||| ||||||||||||||||||||||    
T  50544 taggagaaaacgaagaaaaaactaacat---aattcaactcccccttcttgtgtttttctcaccttca 50480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 476168 - 476205
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  476168 acaattcaaccccccttcttgtgtttttctcaccttca 476205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 482688 - 482725
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  482688 acaattcaaccccccttcttgtgtttttctcaccttca 482725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 1077 - 1014
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| | ||||   |||||||||||||| ||||||||||| ||||||||||    
T  1077 taggagaaaacgaagaaaaatcaaaca---caattcaaccccccttcttgtgttttgctcaccttca 1014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 7139 - 7076
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||| ||||||||  ||||||   | ||||||||||| ||||||||||||||||||||||    
T  7139 taggagaaaaataagaaaaagttaacag---agttcaaccccccttcttgtgtttttctcaccttca 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 5407 - 5372
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcacctt 120  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5407 acaattcaaccccccttcttgtgtttttctcacctt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 14002 - 13963
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  14002 acaattcaaccccccttcttgtgtttttcacaccttcaga 13963  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 87149 - 87092
Alignment:
Q  62 aaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||| ||||||   ||||||||||| || ||||||||||||||||| ||||    
T  87149 aaaaagaagaaaaagctaaca---caattcaaccctccttcttgtgtttttctcactttca 87092  T

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Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 76485 - 76448
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  76485 acaattcaaacccccttcttgtgtttttctcaccttca 76448  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 83672 - 83594
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagat-aggagaaaaagaagaaaaaactaaca 82  Q
    |||| ||||||||||| ||| | ||||||||||||||| |  | |||||| | ||||||||||||||||||| ||||||    
T  83672 acataacttcagaagtggaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaaca 83594  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 83556 - 83494
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||||||||||||| ||||||   |||||||||| |   ||||||||||||||||||||||    
T  83556 taggagaaaaagaagaaaaagctaaca---caattcaacctcat-tcttgtgtttttctcaccttca 83494  T

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Target: scaffold1747 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 581 - 517
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| | ||||   |||||||| |||||| ||||||||||||||||||||||    
T  581 taggagaaaacgaagaaaaagcaaaca---caattcaatccccccttcttgtgtttttctcaccttca 517  T

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Target: scaffold1745 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 830 - 894
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaa-ccccccatcttgtgtttttctcaccttca 122  Q
    |||||||||| ||||||||| | ||||   |||||||| |||||| ||||||||||||||||||||||    
T  830 taggagaaaacgaagaaaaagcaaaca---caattcaatccccccttcttgtgtttttctcaccttca 894  T

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Target: scaffold0607 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 5443 - 5326
Alignment:
Q  5 acatcacttcagaagtagaattatatctgcttctgatctgcttgtttcagataggagaaaaagaagaaaaaactaacagtacaattcaa---ccccccat 101  Q
    ||||| ||||| |||||||| | ||||||||||||||||  |  |||||| ||||| |||||||||||||| | |||   |||||||||   |||||| |    
T  5443 acatctcttcaaaagtagaactctatctgcttctgatct-atattttcagttaggataaaaagaagaaaaagccaac---acaattcaaaccccccccct 5348  T
Q  102 cttgtg-tttttctcaccttca 122  Q
    |||||| |||||||||||||||    
T  5347 cttgtgttttttctcaccttca 5326  T

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Target: scaffold0547 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 160 - 123
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  160 acaattcaaccccccttcttctgtttttctcaccttca 123  T

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Target: scaffold0330 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 522 - 586
Alignment:
Q  56 taggagaaaaagaagaaaaaactaacagtacaattcaaccccccatcttgtg-tttttctcaccttca 122  Q
    |||||||||||||||||||||| |||    |||||||||||||  ||||||| |||||||||||||||    
T  522 taggagaaaaagaagaaaaaaccaac---tcaattcaacccccattcttgtgttttttctcaccttca 586  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19357 - 19320
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  19357 acaattcaaccccccttcttgtgtttttctcaacttca 19320  T

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Target: scaffold0073 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 57784 - 57747
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  57784 acaattcaaccccccttcttctgtttttctcaccttca 57747  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 112800 - 112837
Alignment:
Q  85 acaattcaaccccccatcttgtgtttttctcaccttca 122  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  112800 acaattcaaccccctttcttgtgtttttctcaccttca 112837  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 37569 - 37609
Alignment:
Q  85 acaattcaaccccccat-cttgtgtttttctcaccttcaga 124  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  37569 acaattcaacccccccttcttgtgtttttctcaccttcaga 37609  T

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