View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8631_low_23 (Length: 293)
Name: NF8631_low_23
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8631_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 25839712 - 25839426
Alignment:
| Q |
1 |
acgaatagacacttgatagtaataacatgtttgcaaaaagaaaatgtataaatttaaagaaaattaactataattacatcaaagataagaaccattttca |
100 |
Q |
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| T |
25839712 |
acgaatagacacttgatagtaataacatgtttgcaaaaagaaaatgtataaatttaaagaaaattaactataattacatcaaagataagaaccattttca |
25839613 |
T |
|
| Q |
101 |
tcaatttggtacattaattctcaatcaaatcatttccaaatgtatttttgttaaccatggtgttatcgaaagaaagatctctaataattcggaattcaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
25839612 |
tcaatttggtacattaattctcaatcaaatcatttccaaatgtatttttgttaaccatggggttatcgaaagaaagatctctaataattcggaattcaac |
25839513 |
T |
|
| Q |
201 |
ctagatataagtaaaatctgattaaaaattgctccatccataaaccgaactcatattctcattaacatggttgttttttcttctcac |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
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| T |
25839512 |
ctagatataagtaaaatctgattaaaaattgctccatccataaaccgaactcatattctcattaacatggttttttttctttctcac |
25839426 |
T |
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