View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8631_low_25 (Length: 282)
Name: NF8631_low_25
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8631_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 28294017 - 28294261
Alignment:
| Q |
18 |
atggaatgtatccgaaaaactgaggcatttatatattattaaggatacaacacgacaagtaaccttaaaaatacatcatgtgtgattccaaaatgaacta |
117 |
Q |
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| T |
28294017 |
atggaatgtatccgaaaaactgaggcatttatatattattaaggatacaacacgacaagtaaccttaaaaatacatcatgtgtgattccaaaatgaacta |
28294116 |
T |
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| Q |
118 |
tagaacgaatgaaacattgaaaactttgtaacttgctcgtcttacagaatgtatttgttgaaaagtaacttgaagtgtatgaaaagtaactcgaagttcg |
217 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28294117 |
tagaacgaatgaaacgttgaaaactttgtaacttgctcgtcttacagaatgtatttgttgaaaagtaacttgaagtgtatgaaaagtaactcgaagttcg |
28294216 |
T |
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| Q |
218 |
gttgcattgtcagcttccatataagcaatcatctggatcattctc |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28294217 |
gttgcattgtcagcttccatataagcaatcatctggatcattctc |
28294261 |
T |
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