View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8631_low_26 (Length: 277)
Name: NF8631_low_26
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8631_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 9 - 258
Target Start/End: Original strand, 364148 - 364397
Alignment:
| Q |
9 |
aatgagatgaacaaaccacctttgaagaagacaaagacacttccttccctcaatctcagagtttcagttactcctcccaatcccaatgacaacaatggaa |
108 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
364148 |
aatgtgatgaacaaaccacctttgaagaagacaaagacacttccttccctcaatctcagagtttctgttactcctcccaatcccaatgacaacaatggaa |
364247 |
T |
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| Q |
109 |
ttggaggaacttcaactactaaaactgatttctcagaacaacaatggaactacccttctttccttggcattggcagcacctccagaaaaagaagacaacc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
364248 |
ttggaggaacttcaactactaaaactgatttctcagaacaacaatggaactacccttctttccttggcattggcagcacctccagaaaaagaagacaacc |
364347 |
T |
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| Q |
209 |
accccctcctccttccaaacctcctgtaaacctcattcctcctcatcccc |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
364348 |
accccctcctccttccaaacctcctgtaaacctcattcctcctcatcccc |
364397 |
T |
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