View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8631_low_45 (Length: 218)
Name: NF8631_low_45
Description: NF8631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8631_low_45 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 24 - 210
Target Start/End: Original strand, 37696557 - 37696743
Alignment:
| Q |
24 |
accacttccactctaatactcacaccaccctacatgtctacttgcactaccatgcaaacctcaccaaactttggcatagatttaactgcaccattccaaa |
123 |
Q |
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| T |
37696557 |
accacttccactctaatactcacaccaccctacatgtctacttgcactaccatgcaaacctcaccaaactttggcatagatttaactgcaccattccaaa |
37696656 |
T |
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| Q |
124 |
tatcttcctccactttcatcctcctctattgccaagtaaaaagttcaaccatttgtgacacttcttttgattacctctctgcttctc |
210 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
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| T |
37696657 |
tatcttcctccactttcatcctcctccattgccaagtaaaaagttcaaccatttgtgacacttcttttgattacctttgtgcttctc |
37696743 |
T |
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