View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8637_low_11 (Length: 216)
Name: NF8637_low_11
Description: NF8637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8637_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 16559907 - 16560045
Alignment:
| Q |
21 |
tacgactccaaagccacactccctctccgtcttgtacaccagctgcccaccagaacaacataattgcat-ccctcttcattgtcgtacttactatcacag |
119 |
Q |
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| T |
16559907 |
tacgactccaaagccacactccctctccgtcttgtacaccagctgcccaccagaacaacataattgcatcccctcttcatcgtcgtacttactatcacag |
16560006 |
T |
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| Q |
120 |
tctttgcaagcgctagactcacacctcagctgcgaacaa |
158 |
Q |
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| T |
16560007 |
tctttgcaagcgctagactcacgcctcagctgcgaacaa |
16560045 |
T |
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