View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8638_low_17 (Length: 358)
Name: NF8638_low_17
Description: NF8638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8638_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 15 - 337
Target Start/End: Original strand, 26452029 - 26452351
Alignment:
| Q |
15 |
ctgtgatgaaaatgcttgaattgggattctatcctgagtatttggatagagttgctgttatgcaaggtttaaggaaaaggatacagcaatatggaaattt |
114 |
Q |
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| T |
26452029 |
ctgtaatgaaaatgcttgaattgggattctatcctgagtatttggatagagttgctgttatgcaaggtttaaggaaaaggatacagcaatatggaaattt |
26452128 |
T |
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| Q |
115 |
agatctttatatcaagctttgtaagtcactgtctgaagcaaatcttataggaccttgtcttgtgtatttgtatgttagaaaatataagctttgggttgtg |
214 |
Q |
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| T |
26452129 |
agatctttatatcaagctttgtaagtcactgtctgaagcaaatcttataggaccttgtcttgtgtatttgtatgttagaaaatataagctttgggttgtg |
26452228 |
T |
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| Q |
215 |
aaaatgatctaagaaaagttcttgtaaaaaacctgccaatttttcaaacctttggttttagaggcttagttgtgtattgtaactagagcatcgattttgt |
314 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26452229 |
aaaatgatctaagaaaagtacttgtaaaaaacctgccaatttttcaaacctttggttttagaggcttagttgtgtattgtaactagagcatcgattttgt |
26452328 |
T |
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| Q |
315 |
tggtgcttgtataaatttgtata |
337 |
Q |
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||||||||||||||||||||||| |
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| T |
26452329 |
tggtgcttgtataaatttgtata |
26452351 |
T |
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