View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8639_high_11 (Length: 234)
Name: NF8639_high_11
Description: NF8639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8639_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 51822325 - 51822530
Alignment:
| Q |
11 |
agattattctgaagaagaagaagtgcgtacatttttcctttgttgcacatgtttggtggaattgaacccgttaagaaattctccgaaacgtcgatgtatt |
110 |
Q |
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| T |
51822325 |
agattgttctgaagaagaagaagtgcgtacatttttcctttgttgcacatgtttggtggaattgaacccgttaagaaattctccgaaacgtcgatgtatt |
51822424 |
T |
|
| Q |
111 |
caaattctgaccatgatccagtcttctgaggaattggacctgttaatctgtttctgtaaagagacagttcccggaggtttttaaactcacctatctccgg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51822425 |
caaattctgaccatgatccagtcttctgaggaattggacctgttaatctgtttctgtaaagagacagttcccggaggtttttaaactcacctatctccgg |
51822524 |
T |
|
| Q |
211 |
tggaat |
216 |
Q |
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|||||| |
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| T |
51822525 |
tggaat |
51822530 |
T |
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