View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8643_high_2 (Length: 502)
Name: NF8643_high_2
Description: NF8643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8643_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 211 - 500
Target Start/End: Original strand, 27025000 - 27025289
Alignment:
| Q |
211 |
ggaggatgcatgaggaggttgtgcagtaggtgtcacctacacagttcatacaatcactttaaaaacagaaaatgtttaaataaaatttacttttttacga |
310 |
Q |
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| T |
27025000 |
ggaggatgcatgaggaggttgtgcagtaggtgtcacctacacagttcatacaatcactttaaaaacagaaaatgtttaaataaaatttacttttttacga |
27025099 |
T |
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| Q |
311 |
aggttttagtagcttctacgagtttagttctagttaaacttaactaaattttgaaagcatgtctccagaattcaacaattttaacaatatacatcaagaa |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27025100 |
aggttttagtagcttctacgagtttagttctagttaaacttaactaaattttgaaagcatgtctccagaattcaacaattttaacaatatacatcaagaa |
27025199 |
T |
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| Q |
411 |
gtatatatccaaaattgagattattatgtacctaatactagacatacatattgagattgttgtgtacctaatactatacatacattatac |
500 |
Q |
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| T |
27025200 |
gtatatatccaaaattgagattattatgtacctaatactagacatacatattgagattgctgtgtacctaatactatacatacattatac |
27025289 |
T |
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