View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8643_low_25 (Length: 224)
Name: NF8643_low_25
Description: NF8643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8643_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 35302781 - 35302592
Alignment:
| Q |
18 |
gtcctctccctcacatcgatcatctcctcacttctctctcttaccctaaaaccctcaaaaaccctacctccattcacctctcttcttacctcgatttcac |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35302781 |
gtcctctccctcacatcgatcatctcctcacttctctctcttaccctaaaaccctccaaaaccctacctccattcacctctcttcttacctcgatttcac |
35302682 |
T |
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| Q |
118 |
aaactttttctacaacaattgccccggcgtcgttaccttttccgacgctaactccgtcgctcaaaccgccacatttcacctccctgattt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35302681 |
aaactttttctacaacaattgccccggcgtcgttaccttttccgacgctaactccgtcgctcaaaccgccacatttcacctccctgattt |
35302592 |
T |
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