View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8643_low_6 (Length: 478)

Name: NF8643_low_6
Description: NF8643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8643_low_6
NF8643_low_6
[»] chr1 (31 HSPs)
chr1 (1-370)||(45599211-45599572)
chr1 (3-370)||(40313105-40313464)
chr1 (70-370)||(33062370-33062662)
chr1 (96-364)||(17012013-17012275)
chr1 (56-370)||(52436700-52437008)
chr1 (56-337)||(17038218-17038494)
chr1 (67-264)||(26972386-26972578)
chr1 (67-264)||(4246016-4246207)
chr1 (67-264)||(11667850-11668040)
chr1 (67-210)||(17851406-17851550)
chr1 (56-210)||(47941373-47941527)
chr1 (71-264)||(1973298-1973484)
chr1 (56-262)||(23477924-23478123)
chr1 (56-208)||(12753031-12753184)
chr1 (114-264)||(20841252-20841394)
chr1 (67-264)||(14745770-14745960)
chr1 (113-211)||(13165422-13165521)
chr1 (77-264)||(17379610-17379790)
chr1 (77-264)||(17355818-17355998)
chr1 (66-158)||(15804196-15804289)
chr1 (76-148)||(18390200-18390273)
chr1 (75-143)||(49086692-49086761)
chr1 (67-145)||(20859641-20859720)
chr1 (106-210)||(51472126-51472230)
chr1 (56-151)||(10340249-10340345)
chr1 (83-143)||(50057518-50057579)
chr1 (225-335)||(10340075-10340184)
chr1 (59-148)||(41330897-41330987)
chr1 (77-157)||(8281911-8281992)
chr1 (75-143)||(23600515-23600584)
chr1 (76-143)||(25123330-25123398)
[»] chr5 (40 HSPs)
chr5 (1-370)||(7897796-7898158)
chr5 (1-370)||(17920666-17921027)
chr5 (1-370)||(20498033-20498398)
chr5 (1-341)||(26183144-26183478)
chr5 (66-339)||(20740849-20741115)
chr5 (56-264)||(20845782-20845983)
chr5 (56-202)||(22130877-22131022)
chr5 (67-264)||(22404749-22404940)
chr5 (67-264)||(30605679-30605869)
chr5 (67-264)||(26329202-26329392)
chr5 (70-211)||(26036794-26036936)
chr5 (67-264)||(24189843-24190034)
chr5 (56-264)||(13734961-13735163)
chr5 (67-211)||(25105453-25105599)
chr5 (67-211)||(25164546-25164692)
chr5 (67-264)||(13338573-13338762)
chr5 (66-211)||(23420594-23420741)
chr5 (77-339)||(13941912-13942166)
chr5 (56-264)||(22184586-22184786)
chr5 (118-211)||(22246384-22246478)
chr5 (76-145)||(11204712-11204781)
chr5 (102-264)||(23623894-23624048)
chr5 (72-264)||(18221096-18221281)
chr5 (124-211)||(22252074-22252162)
chr5 (70-264)||(20714724-20714912)
chr5 (56-264)||(9522506-9522705)
chr5 (57-152)||(17661503-17661598)
chr5 (76-143)||(24394622-24394690)
chr5 (77-157)||(24117586-24117667)
chr5 (76-143)||(15116782-15116850)
chr5 (222-312)||(22130790-22130879)
chr5 (67-163)||(9422549-9422646)
chr5 (223-264)||(9422505-9422546)
chr5 (215-264)||(22979868-22979917)
chr5 (116-184)||(20127026-20127093)
chr5 (77-152)||(22979736-22979811)
chr5 (76-148)||(11756301-11756373)
chr5 (76-143)||(19006639-19006706)
chr5 (76-143)||(19663578-19663646)
chr5 (56-104)||(20286777-20286825)
[»] chr3 (56 HSPs)
chr3 (1-370)||(8748955-8749316)
chr3 (7-370)||(9036629-9036984)
chr3 (7-312)||(9031321-9031618)
chr3 (67-293)||(13917825-13918041)
chr3 (67-211)||(295441-295586)
chr3 (56-337)||(13913762-13914038)
chr3 (56-294)||(7479096-7479324)
chr3 (67-264)||(17702387-17702578)
chr3 (56-264)||(18064193-18064394)
chr3 (57-264)||(6580854-6581054)
chr3 (67-264)||(13790660-13790851)
chr3 (56-259)||(7495921-7496115)
chr3 (61-267)||(11558308-11558501)
chr3 (61-267)||(11567577-11567770)
chr3 (56-211)||(8224810-8224966)
chr3 (67-264)||(15635860-15636051)
chr3 (72-211)||(18547634-18547775)
chr3 (71-264)||(28051121-28051307)
chr3 (56-211)||(18034928-18035084)
chr3 (72-207)||(20748200-20748335)
chr3 (74-211)||(11656010-11656148)
chr3 (67-264)||(24195505-24195695)
chr3 (72-264)||(23954544-23954730)
chr3 (56-207)||(12054485-12054635)
chr3 (74-211)||(17042786-17042924)
chr3 (56-211)||(18476901-18477055)
chr3 (67-262)||(44452461-44452650)
chr3 (114-211)||(19633915-19634012)
chr3 (72-211)||(13524714-13524853)
chr3 (102-177)||(19531950-19532025)
chr3 (115-264)||(21718913-21719054)
chr3 (57-142)||(10082375-10082461)
chr3 (77-210)||(31649682-31649814)
chr3 (57-143)||(10189299-10189386)
chr3 (73-175)||(15686226-15686329)
chr3 (113-198)||(1919281-1919367)
chr3 (77-184)||(3552274-3552381)
chr3 (76-143)||(8531382-8531450)
chr3 (53-151)||(14406722-14406821)
chr3 (68-337)||(286807-287069)
chr3 (87-143)||(20976090-20976147)
chr3 (102-152)||(980456-980506)
chr3 (215-264)||(215333-215382)
chr3 (76-143)||(8147641-8147709)
chr3 (102-158)||(21094787-21094842)
chr3 (75-125)||(42243780-42243831)
chr3 (215-264)||(14406616-14406665)
chr3 (76-143)||(19584010-19584078)
chr3 (76-143)||(43902135-43902202)
chr3 (223-335)||(21094619-21094730)
chr3 (102-151)||(3445098-3445146)
chr3 (75-143)||(15962262-15962330)
chr3 (171-211)||(18483403-18483444)
chr3 (81-118)||(40199885-40199922)
chr3 (92-143)||(20962162-20962214)
chr3 (140-207)||(21254029-21254097)
[»] chr4 (43 HSPs)
chr4 (1-369)||(23541159-23541520)
chr4 (1-370)||(19894693-19895047)
chr4 (1-364)||(24143049-24143406)
chr4 (7-370)||(25354517-25354874)
chr4 (1-364)||(11325031-11325390)
chr4 (1-369)||(22554884-22555249)
chr4 (7-211)||(46741783-46741987)
chr4 (71-264)||(21478093-21478279)
chr4 (68-300)||(11905077-11905299)
chr4 (67-264)||(25116804-25116997)
chr4 (67-208)||(15700347-15700490)
chr4 (67-264)||(33898976-33899167)
chr4 (74-264)||(9068933-9069116)
chr4 (102-211)||(16383907-16384017)
chr4 (67-211)||(28019285-28019431)
chr4 (72-211)||(10190872-10191013)
chr4 (114-264)||(23400182-23400325)
chr4 (233-370)||(46739146-46739278)
chr4 (67-264)||(8163763-8163956)
chr4 (68-210)||(13399338-13399481)
chr4 (103-210)||(18618150-18618258)
chr4 (56-264)||(10721954-10722154)
chr4 (68-264)||(10724241-10724430)
chr4 (56-264)||(10935723-10935923)
chr4 (68-264)||(10938010-10938199)
chr4 (56-211)||(33745933-33746089)
chr4 (110-264)||(19659463-19659610)
chr4 (56-211)||(15162521-15162677)
chr4 (56-264)||(10198239-10198439)
chr4 (76-155)||(33737973-33738053)
chr4 (116-203)||(19183722-19183809)
chr4 (75-211)||(50907840-50907977)
chr4 (75-143)||(13268835-13268904)
chr4 (56-175)||(41785404-41785524)
chr4 (102-184)||(32861664-32861746)
chr4 (76-143)||(11865215-11865283)
chr4 (76-143)||(24608696-24608764)
chr4 (76-261)||(2679839-2680013)
chr4 (102-179)||(16655405-16655481)
chr4 (83-143)||(17871604-17871665)
chr4 (57-144)||(11289438-11289525)
chr4 (73-143)||(13875961-13876031)
chr4 (76-143)||(19564825-19564893)
[»] chr7 (79 HSPs)
chr7 (1-370)||(3290564-3290928)
chr7 (9-358)||(7620004-7620347)
chr7 (1-364)||(48797506-48797863)
chr7 (1-370)||(14975348-14975711)
chr7 (1-370)||(15404824-15405187)
chr7 (1-358)||(14984589-14984938)
chr7 (1-358)||(15414200-15414549)
chr7 (66-370)||(11628620-11628915)
chr7 (77-294)||(42782747-42782957)
chr7 (77-263)||(30226076-30226256)
chr7 (56-337)||(9564227-9564503)
chr7 (66-300)||(11560457-11560683)
chr7 (67-264)||(13455099-13455289)
chr7 (60-312)||(4794527-4794772)
chr7 (56-312)||(9566876-9567122)
chr7 (56-207)||(10658353-10658505)
chr7 (67-264)||(4458720-4458911)
chr7 (74-208)||(15436037-15436172)
chr7 (61-211)||(15506243-15506394)
chr7 (67-205)||(20991523-20991662)
chr7 (67-211)||(11521442-11521588)
chr7 (56-264)||(42636217-42636418)
chr7 (74-211)||(14926635-14926773)
chr7 (74-211)||(15350101-15350239)
chr7 (102-211)||(16207913-16208023)
chr7 (67-264)||(645114-645305)
chr7 (67-264)||(11588445-11588636)
chr7 (67-211)||(16436755-16436900)
chr7 (102-264)||(29546125-29546279)
chr7 (67-262)||(11998860-11999049)
chr7 (102-262)||(10279832-10279983)
chr7 (56-158)||(26133000-26133103)
chr7 (113-264)||(14165193-14165337)
chr7 (76-145)||(2076496-2076565)
chr7 (76-145)||(2082915-2082984)
chr7 (75-158)||(23174966-23175050)
chr7 (56-210)||(7586563-7586718)
chr7 (75-157)||(24813914-24813997)
chr7 (56-157)||(15708142-15708243)
chr7 (215-333)||(24049572-24049691)
chr7 (75-150)||(31269148-31269224)
chr7 (117-207)||(12325845-12325936)
chr7 (76-152)||(23057196-23057273)
chr7 (56-184)||(26195518-26195645)
chr7 (102-264)||(9894054-9894208)
chr7 (66-139)||(4547851-4547924)
chr7 (56-150)||(20596918-20597013)
chr7 (123-207)||(20925138-20925222)
chr7 (56-261)||(23956847-23957045)
chr7 (77-151)||(7508426-7508501)
chr7 (77-264)||(23579941-23580121)
chr7 (56-157)||(24902078-24902178)
chr7 (77-158)||(10251431-10251513)
chr7 (76-143)||(12505697-12505766)
chr7 (56-264)||(20588695-20588895)
chr7 (102-175)||(23082842-23082915)
chr7 (102-150)||(10309583-10309631)
chr7 (76-142)||(10260231-10260298)
chr7 (57-151)||(14687339-14687433)
chr7 (104-158)||(6045340-6045393)
chr7 (111-302)||(10038677-10038861)
chr7 (75-143)||(9732836-9732905)
chr7 (76-143)||(12484267-12484336)
chr7 (77-148)||(19353122-19353193)
chr7 (74-184)||(21260503-21260614)
chr7 (102-152)||(11407041-11407091)
chr7 (218-264)||(31269044-31269090)
chr7 (75-143)||(2392878-2392947)
chr7 (79-143)||(5299140-5299205)
chr7 (75-143)||(21546902-21546971)
chr7 (215-264)||(23057328-23057377)
chr7 (221-264)||(7508562-7508605)
chr7 (221-264)||(23296631-23296674)
chr7 (225-264)||(26132903-26132942)
chr7 (218-264)||(14687492-14687538)
chr7 (222-264)||(24902234-24902276)
chr7 (56-121)||(24049508-24049572)
chr7 (216-264)||(10660986-10661034)
chr7 (215-263)||(11406938-11406986)
[»] chr8 (36 HSPs)
chr8 (1-370)||(8726776-8727121)
chr8 (1-370)||(17279801-17280166)
chr8 (1-370)||(39080881-39081242)
chr8 (56-370)||(17880620-17880928)
chr8 (1-370)||(37155406-37155770)
chr8 (56-369)||(33466043-33466348)
chr8 (67-264)||(24091938-24092128)
chr8 (102-264)||(22476247-22476402)
chr8 (56-268)||(1683948-1684150)
chr8 (113-214)||(22874206-22874307)
chr8 (67-264)||(11221260-11221445)
chr8 (375-469)||(8734332-8734426)
chr8 (56-157)||(23249705-23249806)
chr8 (71-211)||(33977043-33977184)
chr8 (56-211)||(9996469-9996625)
chr8 (67-211)||(23541443-23541589)
chr8 (102-265)||(13660359-13660513)
chr8 (102-265)||(13719002-13719156)
chr8 (56-210)||(25240375-25240531)
chr8 (102-210)||(12814626-12814734)
chr8 (75-293)||(23864426-23864637)
chr8 (129-264)||(22485177-22485305)
chr8 (71-184)||(33961746-33961860)
chr8 (56-152)||(1562459-1562556)
chr8 (67-150)||(45133645-45133729)
chr8 (73-184)||(24850493-24850603)
chr8 (126-264)||(27925434-27925564)
chr8 (154-264)||(45136184-45136286)
chr8 (74-184)||(20254943-20255054)
chr8 (106-211)||(24384582-24384687)
chr8 (76-153)||(12240228-12240306)
chr8 (76-143)||(24482308-24482376)
chr8 (74-143)||(32179295-32179365)
chr8 (216-264)||(12240365-12240413)
chr8 (221-264)||(23249863-23249906)
chr8 (77-152)||(18753875-18753951)
[»] chr6 (60 HSPs)
chr6 (1-370)||(16137462-16137825)
chr6 (1-370)||(19215869-19216231)
chr6 (1-370)||(15038261-15038624)
chr6 (66-358)||(9384594-9384879)
chr6 (66-358)||(15003055-15003341)
chr6 (73-369)||(12444604-12444891)
chr6 (66-302)||(20003117-20003346)
chr6 (56-268)||(16309342-16309545)
chr6 (67-264)||(20558283-20558473)
chr6 (56-210)||(15007370-15007524)
chr6 (72-264)||(17855180-17855366)
chr6 (72-264)||(20470191-20470376)
chr6 (67-264)||(33665774-33665965)
chr6 (102-264)||(9281696-9281851)
chr6 (67-211)||(34657184-34657329)
chr6 (102-264)||(13195340-13195495)
chr6 (72-208)||(15897710-15897847)
chr6 (74-211)||(24501812-24501950)
chr6 (102-264)||(25805470-25805624)
chr6 (56-264)||(28623499-28623699)
chr6 (67-294)||(23882652-23882872)
chr6 (71-264)||(29254904-29255089)
chr6 (67-264)||(17864413-17864603)
chr6 (109-210)||(21723442-21723543)
chr6 (67-264)||(14258891-14259082)
chr6 (67-207)||(20989802-20989943)
chr6 (106-214)||(32449271-32449379)
chr6 (67-208)||(17527920-17528063)
chr6 (56-335)||(26965488-26965760)
chr6 (67-210)||(21706383-21706528)
chr6 (113-264)||(25964722-25964866)
chr6 (113-264)||(25969369-25969513)
chr6 (113-264)||(25973809-25973953)
chr6 (102-211)||(12039715-12039824)
chr6 (67-260)||(17234572-17234759)
chr6 (68-167)||(25782793-25782893)
chr6 (61-344)||(21323181-21323457)
chr6 (117-210)||(13870399-13870493)
chr6 (122-264)||(19171452-19171587)
chr6 (73-285)||(3567389-3567592)
chr6 (236-358)||(32452131-32452252)
chr6 (67-211)||(8465705-8465846)
chr6 (76-143)||(22885237-22885305)
chr6 (79-264)||(20764982-20765160)
chr6 (76-143)||(3904767-3904834)
chr6 (219-264)||(18152694-18152739)
chr6 (56-148)||(30424905-30424998)
chr6 (77-152)||(18152798-18152874)
chr6 (76-143)||(22903195-22903263)
chr6 (115-210)||(11960511-11960608)
chr6 (75-143)||(12464156-12464225)
chr6 (80-143)||(1103411-1103474)
chr6 (76-143)||(3357097-3357165)
chr6 (84-143)||(13553349-13553409)
chr6 (275-369)||(15004177-15004272)
chr6 (76-138)||(22918045-22918108)
chr6 (143-208)||(19894656-19894722)
chr6 (75-135)||(16176583-16176644)
chr6 (83-143)||(28045031-28045092)
chr6 (76-143)||(14448583-14448651)
[»] chr2 (39 HSPs)
chr2 (66-369)||(29565993-29566288)
chr2 (69-370)||(18765659-18765954)
chr2 (70-345)||(13314872-13315141)
chr2 (67-264)||(23758606-23758797)
chr2 (72-264)||(36398782-36398968)
chr2 (109-264)||(26860284-26860432)
chr2 (67-264)||(12910470-12910661)
chr2 (67-264)||(24790146-24790337)
chr2 (56-211)||(19466556-19466712)
chr2 (76-189)||(15328299-15328412)
chr2 (67-264)||(22610873-22611064)
chr2 (56-262)||(20649547-20649746)
chr2 (104-207)||(21530404-21530507)
chr2 (56-335)||(21250116-21250387)
chr2 (102-213)||(25347210-25347321)
chr2 (77-264)||(27111071-27111250)
chr2 (75-184)||(24317871-24317981)
chr2 (77-158)||(31587467-31587548)
chr2 (76-152)||(12952462-12952539)
chr2 (76-143)||(31067586-31067654)
chr2 (76-143)||(17395546-17395614)
chr2 (102-152)||(19198371-19198420)
chr2 (102-152)||(24283621-24283671)
chr2 (215-264)||(27107632-27107681)
chr2 (76-143)||(17363507-17363575)
chr2 (76-143)||(45550031-45550098)
chr2 (56-211)||(24317222-24317380)
chr2 (87-140)||(25867173-25867227)
chr2 (83-143)||(20378326-20378387)
chr2 (111-264)||(20475264-20475409)
chr2 (76-143)||(8163074-8163142)
chr2 (76-143)||(30947324-30947392)
chr2 (106-152)||(20476669-20476715)
chr2 (215-264)||(12952594-12952643)
chr2 (79-143)||(21713452-21713517)
chr2 (80-136)||(28645773-28645830)
chr2 (76-108)||(18593566-18593598)
chr2 (112-184)||(23801868-23801939)
chr2 (131-214)||(27107556-27107639)
[»] scaffold0328 (1 HSPs)
scaffold0328 (9-356)||(16867-17209)
[»] scaffold0143 (1 HSPs)
scaffold0143 (56-369)||(36268-36573)
[»] scaffold0032 (1 HSPs)
scaffold0032 (70-345)||(103090-103358)
[»] scaffold0022 (1 HSPs)
scaffold0022 (74-364)||(3111-3392)
[»] scaffold0064 (2 HSPs)
scaffold0064 (57-294)||(52886-53112)
scaffold0064 (215-339)||(45778-45903)
[»] scaffold0338 (1 HSPs)
scaffold0338 (67-264)||(16201-16391)
[»] scaffold0102 (1 HSPs)
scaffold0102 (67-264)||(36986-37177)
[»] scaffold0103 (1 HSPs)
scaffold0103 (67-264)||(25661-25852)
[»] scaffold0037 (1 HSPs)
scaffold0037 (106-264)||(110244-110395)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-264)||(40316-40506)
[»] scaffold0259 (1 HSPs)
scaffold0259 (56-264)||(17266-17467)
[»] scaffold0226 (3 HSPs)
scaffold0226 (67-264)||(7528-7718)
scaffold0226 (70-264)||(18115-18302)
scaffold0226 (70-264)||(27509-27696)
[»] scaffold0003 (1 HSPs)
scaffold0003 (67-211)||(26385-26530)
[»] scaffold0059 (3 HSPs)
scaffold0059 (56-264)||(61461-61662)
scaffold0059 (67-205)||(50130-50270)
scaffold0059 (223-264)||(48332-48373)
[»] scaffold0088 (1 HSPs)
scaffold0088 (102-207)||(36609-36715)
[»] scaffold0006 (1 HSPs)
scaffold0006 (67-210)||(87716-87861)
[»] scaffold0190 (1 HSPs)
scaffold0190 (67-211)||(16657-16803)
[»] scaffold0185 (1 HSPs)
scaffold0185 (67-259)||(2351-2537)
[»] scaffold0333 (1 HSPs)
scaffold0333 (67-198)||(5627-5759)
[»] scaffold0035 (1 HSPs)
scaffold0035 (113-262)||(37393-37536)
[»] scaffold0072 (1 HSPs)
scaffold0072 (76-143)||(18540-18607)
[»] scaffold0062 (1 HSPs)
scaffold0062 (76-140)||(2182-2247)
[»] scaffold0015 (2 HSPs)
scaffold0015 (106-158)||(202416-202468)
scaffold0015 (222-312)||(202523-202612)
[»] scaffold0505 (2 HSPs)
scaffold0505 (77-152)||(10128-10204)
scaffold0505 (221-264)||(10024-10067)
[»] scaffold0205 (1 HSPs)
scaffold0205 (83-143)||(9969-10030)
[»] scaffold0423 (2 HSPs)
scaffold0423 (75-150)||(13596-13672)
scaffold0423 (215-264)||(13729-13778)
[»] scaffold0054 (1 HSPs)
scaffold0054 (76-143)||(8754-8822)
[»] scaffold0520 (2 HSPs)
scaffold0520 (77-158)||(5409-5491)
scaffold0520 (223-264)||(5548-5589)
[»] scaffold0070 (1 HSPs)
scaffold0070 (78-121)||(3650-3694)


Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 45599572 - 45599211
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  45599572 tgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaagtaaaaggcacagtgagtttgttaactcaattcggtgcaacg 45599473  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||    
T  45599472 tcacctactctcggggctaccaagccaggaaggaaatccactaatgtagtccgtattcaatagttctcaacaaactcctcatttgcactaatgacctagg 45599373  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    ||||||||||        ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  45599372 acctacccgt--------actgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatcacaacccttgtgattctcaaa 45599281  T
Q  301 ttgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||    
T  45599280 ttacaaacacaatgaaatgaagttactttcaaacaaaacaactaaacaccatacttcacagcttaggtgc 45599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 3 - 370
Target Start/End: Complemental strand, 40313464 - 40313105
Alignment:
Q  3 aataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtc 102  Q
    |||||||| |||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  40313464 aataaaatatttcgaacatgaagctaacacaagacaaggaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcagtgcaacgtt 40313365  T
Q  103 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggac 202  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40313364 acctactcagggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgtttgcactaatgacctaggac 40313265  T
Q  203 ctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaatt 302  Q
    |||        |||||||||||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |    
T  40313264 cta--------gccgtactgacttcaacctaggaactcatatatctgagatctcatctcactcccttacaactgatcacaacccctgtgattctcaaact 40313173  T
Q  303 gcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
     ||||||||||||||| ||||||||||||||||||| ||||||| || |||||||| ||||| |||||    
T  40313172 acaaacacaatgaaataaagttaccttcaaacaaaataactaaaaactgtacttcacagctttggtgc 40313105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 70 - 370
Target Start/End: Original strand, 33062370 - 33062662
Alignment:
Q  70 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  33062370 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagaaaggaaatccactagtgtagtccttattcaatagctctta 33062469  T
Q  170 gcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccct 268  Q
    ||||||||||||||||||||| ||||||||||||||||        || |||||||||||||||| |||||||||||| ||||| | ||||||| ||||     
T  33062470 gcaaactcctcgtttgcactatatgacctaggacctac--------ccttactgacttcaacctaggaactcctagatctgagaccccatctcattcccg 33062561  T
Q  269 tacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagcttagg 367  Q
    |||   |||||||| ||| ||||||||||||| | |||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||    
T  33062562 tac--ttgatcacaacccctgtgattctcaaaatacaaatacaatcaaatgaagttaccttcaaacaaaaacaactaaacaccgtacttcatagctttgg 33062659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 96 - 364
Target Start/End: Original strand, 17012013 - 17012275
Alignment:
Q  96 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atga 194  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||| ||||    
T  17012013 caacatcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaacagctttcagcaaactcctcgtttgcactatatga 17012112  T
Q  195 cctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgatt 294  Q
    ||||||||||||| ||||        ||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  17012113 cctaggacctacctgtac--------tgacttcaacctaggaactcctggatctgagatctcatctcattcccttacaactgatcacaacccctgtgatt 17012204  T
Q  295 ctcaaattgcaaacacaatga-aatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 364  Q
    |||||||| |||| ||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17012205 ctcaaattacaaatacaatcagaatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagctt 17012275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 56 - 370
Target Start/End: Complemental strand, 52437008 - 52436700
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||  ||||| ||    
T  52437008 aaagtaaaagtcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccgagtcaggaagaaaatccactagtacagtcctta 52436909  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||||||||| | || |||||||||||| |||||| ||||| ||||| ||||||||||||        ||||||||||| |||||||||||| |||||||    
T  52436908 ttcaatagctttcagtaaactcctcgttcgcactatatgacataggatctacccgtactg--------acttcaacctaggaactcctagatctgagatc 52436817  T
Q  255 tcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgta 353  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  | |||||||||| |||||||||| ||||| |||||||||||||||| |||||     
T  52436816 tcatcccactcccttacaaatgatcacagcccctgtgattctcaatatacaaacacaatcaaatgaagttgccttcaaaacaaaacaactaaacaccgtg 52436717  T
Q  354 cttcagagcttaggtgc 370  Q
    ||||| ||||| |||||    
T  52436716 cttcatagctttggtgc 52436700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 56 - 337
Target Start/End: Original strand, 17038218 - 17038494
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||||||||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  17038218 aaagtaaaaaacacaggaagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtcctta 17038316  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||||||| |||||| ||| |||||||||||| | ||       ||||||||||||| |||||||||||| |||||||     
T  17038317 ttctctagctctcagcaaactcctcgtttacactaaagacataggacctacccat-ct-------tgacttcaacctaggaactcctagatctgagatcc 17038408  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacac-----aatgaaatgaagttaccttcaaacaaa 337  Q
    |||||| ||||| ||||||  ||||||||||  |||||| |||  || |||||||     ||| | |||||||||||||||||||||    
T  17038409 catctctctccc-tacaaccaatcacagccccagtgattatcaggttacaaacacaaacaaatcatatgaagttaccttcaaacaaa 17038494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 26972578 - 26972386
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  26972578 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtagtccttattcaatagct 26972479  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||  |    |||   ||||||||| |||||||||||| ||||||| |||||||||    
T  26972478 ctcagcaaactcctcgtttacactatatgacctaggacctacccgtatag----act---ttcaacctaggaactcctagatctgagatcccatctcact 26972386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 4246016 - 4246207
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  4246016 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagacaggaaggaaatccactagtgtagtccttattcaatagct 4246115  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| ||||||||||||||||| |||      ||  |||||||||||| |||||||||||| |||||||  ||||||||    
T  4246116 ctcagcaaactcctcgtttacactatatgacctaggacctacctgta------ta--gacttcaacctaggaactcctagatctgagatcctatctcact 4246207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 11668040 - 11667850
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| |||||||||| ||  ||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  11668040 cacagtgagtttgttgacccagttcgatgagaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattctatagct 11667941  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| ||||  |||||||||||||      ||  |||||||||||| |||||||||||| ||||||  |||||||||    
T  11667940 ctcagcaaactcctcgtttacactaaagaccatggacctacccgta------ta--gacttcaacctaggaactcctagatctgagattccatctcact 11667850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 17851550 - 17851406
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||| ||||||||| |||   ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||    
T  17851550 cacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaagaaggaaatccactagtgtagtccttattctatagct 17851451  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgt 210  Q
    || |||||||||||||||| |||||| ||||||||||||| ||||    
T  17851450 ctcagcaaactcctcgtttacactaaagacctaggacctagccgt 17851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 47941527 - 47941373
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| ||||||| |||||||||||||| |||||  |||| |||||||| |||||| ||||| ||| || |||||||||||||||||||||||| |    
T  47941527 aaagtaaaaggcacagtaagtttgttaacccaattcggcacaac-tcacctacatctgggagctacaaagtcaagaaggaaatccactagtgtagtcctt 47941429  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 210  Q
    |||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  47941428 attctatagctcttagcaaactcctcgtttacactaaagacataggacctacccgt 47941373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 1973298 - 1973484
Alignment:
Q  71 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    ||||||||||| ||||||||||||| |||   | ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||| |    
T  1973298 gtgagtttgttgacccagttcggtgacaaacactcctactctgggggataccaagtcaggaaggaaatccactagtgtagtccttattctatagctctca 1973397  T
Q  170 gcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    | ||||||||| ||| |||||| ||||||||||||||        ||||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  1973398 gaaaactcctcatttacactaaagacctaggacctac--------ccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 1973484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 56 - 262
Target Start/End: Complemental strand, 23478123 - 23477924
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||  |||||||||||||||| ||| ||||| ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23478123 aaagtaaatggcacagtgagtttgttgacctagttcagtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 23478024  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| |||||||| |||||||  || |||| || ||| ||||||| |||||||        |||| ||| ||||||||| |||||||||||| |||||||    
T  23478023 attctatagctctcagcaaacaacttgtttacaataaagacctagaacctacc--------cgtattgatttcaacctaggaactcctagatctgagatc 23477932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 56 - 208
Target Start/End: Original strand, 12753031 - 12753184
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||   ||||||||||||||||||||||  ||   |||||||||||| |||||||||||||||||| ||||||||||| ||||||| |    
T  12753031 aaagtaaaaggcacaacaagtttgttaacccagttcggtgagaaacacacctactctggaggctaccaagccaggaagtaaatccactagcgtagtcctt 12753130  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 208  Q
    |||| |||||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  12753131 attctatagctctcagcgaactcctcgtttacactaaagacctaggacctaccc 12753184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 20841394 - 20841252
Alignment:
Q  114 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||| ||||||||||||||           
T  20841394 gggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctcttagcaaactcctcgtttacactaaagacctaggacctac------- 20841302  T
Q  214 gccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
       |||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  20841301 -atgtacagacttcaacctaggaactcctagatctgagatcccatctcact 20841252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 14745960 - 14745770
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||| ||||||||| |||||| |||||| |||   |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14745960 cacagcgagtttgttgacccagctcggtgacaaacacaccaactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagct 14745861  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||| ||||||| ||||| ||||| || ||||||||||||      ||  |||||||||||| |||||| ||||| ||||||| |||||||||    
T  14745860 ctcagcaaactactcgtttacactatatgacata-gacctacccgta------ta--gacttcaacctaggaactcttagatctgagatcacatctcact 14745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 13165422 - 13165521
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||| || || |||||||||||||||||||||    
T  13165422 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcatactcctcgtttacagtatatgacctaggacctacccgta 13165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 17379790 - 17379610
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |  ||| |||||||    
T  17379790 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-atttctcagcaaac 17379692  T
Q  176 tcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||| | |||   |||||||||||||||||| ||       |||||||||||||  ||||||||||| ||||||| |||||||||    
T  17379691 tcctcgtttacaactctagacctaggacctacccgt-ct-------tgacttcaacctagaaactcctagatctgagatcccatctcact 17379610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 17355998 - 17355818
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| | |  ||| |||||||    
T  17355998 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccaccagtgtagtccttattcta-atttctcagcaaac 17355900  T
Q  176 tcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||| | |||    ||||||||||||||||| ||       ||||||||||||| |||||| ||||| ||||||| |||||||||    
T  17355899 tcctcgtttacaactctacacctaggacctacccgt-ct-------tgacttcaacctaggaactcatagatctgagatcccatctcact 17355818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 15804289 - 15804196
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    |||||| ||||||||||||||||||| ||| |||   |||||||| |||||||||||||||||||||| |||| |||||||||||||| |||||    
T  15804289 gcacagcgagtttgttaacccagttcagtgacaaacacacctactatgggggctaccaagccaggaagaaaattcactagtgtagtccttattc 15804196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 18390273 - 18390200
Alignment:
Q  76 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 148  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18390273 tttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgta 18390200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 49086761 - 49086692
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  49086761 gtttgttaacccagttcggtgcaacgtcacctacatgtgggggctaccaagccaggaaagaaattcacta 49086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 20859720 - 20859641
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 145  Q
    |||| ||| |||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||    
T  20859720 cacaatgattttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagt 20859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 51472230 - 51472126
Alignment:
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 204  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||| | || ||| | |||||||||||||| | |||   ||||||||||||    
T  51472230 tactctgggggctaccaaaccaagaaggaaatccactagtgtagtccttattcta-agttctcatcaaactcctcgtttacaactctagacctaggacct 51472132  T
Q  205 acccgt 210  Q
    ||||||    
T  51472131 acccgt 51472126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 10340345 - 10340249
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgt-cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 151  Q
    ||||||||| ||||||  |||||||| ||||||||||||   | || ||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  10340345 aaagtaaaaggcacagaaagtttgttgacccagttcggtaacaagtacacctactctgggggctactaagtcaggaaggaaatccactattgtagtc 10340249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 50057518 - 50057579
Alignment:
Q  83 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  50057518 acccagttcagtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 50057579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 335
Target Start/End: Complemental strand, 10340184 - 10340075
Alignment:
Q  225 ttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagtt 324  Q
    ||||||||| |||||||||||| |||||||||||||||||  | |||||   |||||||||| ||||||| |||||||  ||||||||     |||||||    
T  10340184 ttcaacctaggaactcctagatctgagatctcatctcactatcctacaatcaatcacagcccctgtgattatcaaatt-taaacacaaaatggtgaagtt 10340086  T
Q  325 accttcaaaca 335  Q
    |||||||||||    
T  10340085 accttcaaaca 10340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 41330987 - 41330897
Alignment:
Q  59 gtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 148  Q
    |||||| |||||  ||||||||| ||||||||||||| |||   |||||||| |||||||||| ||||||||||| ||| |||||||||||    
T  41330987 gtaaaaggcacaaagagtttgttgacccagttcggtgacaaacacacctactttgggggctactaagccaggaagtaaaaccactagtgta 41330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 8281911 - 8281992
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 157  Q
    ||||||||| ||||||||| |||   ||||||||| || ||| |||||||||||||||||| |||||| |||||||| ||||    
T  8281911 ttgttaacctagttcggtgacaaacacacctactccggaggcgaccaagccaggaaggaaacccactattgtagtccttatt 8281992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 23600584 - 23600515
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||| ||||||||||||| |||||||| ||||| |||||||||| || |||| |||| |||||    
T  23600584 gtttgttaacctagttcggtgcaacttcacctacatctggaggctaccaaggcaagaagaaaattcacta 23600515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 25123330 - 25123398
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||| || ||||||| |||||||||||| | |||||||   ||||||| |||||||||||||||    
T  25123330 tttgttaacacaattcggtgtaacgtcacctacatgtgggggcattcaagccatgaaggaaatccacta 25123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 7898158 - 7897796
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  7898158 tgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaagtaaaagacacagtgagtttgttaacccagttcggtgcaacg 7898059  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  7898058 tcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaatgacctagg 7897959  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    ||||||||||        ||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  7897958 acctacccgt--------actgacttcaacctaggaactcttagatctgagatcccatctcactcccttacaactgatcacagcccctgtgatactcaaa 7897867  T
Q  301 ttgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || |||| |||||  |||||||||||||||||||||| |||||| || ||||||||||| ||||| |||||    
T  7897866 ttacaaatacaatcaaaatgaagttaccttcaaacaacacaactgaacaccgtacttcacagctttggtgc 7897796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 17921027 - 17920666
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  17921027 tgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaaataaaaggcacagtgagtttgttaacccagttcggtgcaacg 17920928  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  17920927 tcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaaaagctctcagcaaactcctcgtttgcacttatgacctagg 17920828  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    ||||||||||        ||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||||||||||||||||| |||||| ||| ||    
T  17920827 acctacccgt--------actgacttcaacctaggaactcctagatctgagatcccatcttactcctttacaactgatcacagcccctgtgatactc-aa 17920737  T
Q  301 ttgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
     | |||| |||||  |||||||||||||||||||||| |||||| || ||||||||||| ||||| |||||    
T  17920736 gtacaaatacaatcaaaatgaagttaccttcaaacaacacaactgaacaccgtacttcacagctttggtgc 17920666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 20498398 - 20498033
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatg-cacagtgagtttgttaacccagttcggtgcaa 98  Q
    ||||| ||||||||||||||| ||||||||| |||||||| |||| | |||||||||| |||||| | |||||||| |||||||||||||||||||||||    
T  20498398 tgaatgaaatgtttcgaacactaagctaaca-aaaacaagtaaaacgtaaagcataaaagtaaaaagacacagtgaatttgttaacccagttcggtgcaa 20498300  T
Q  99 cgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacct 197  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||    
T  20498299 cgtcacctactctggaggctaccaagtcaggaaggaaatccactcgtgtagtccttattcaatagctctcagcaaactcctcgtttgcactatatgacct 20498200  T
Q  198 aggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctc 297  Q
    |||||||||        ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  20498199 aggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatcacagcccttgtgatactc 20498108  T
Q  298 aaattgcaaacacaat-gaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||||  |||| |||||  |||||||||||||||||||| |||||||||  | ||||||||||  ||||| |||||    
T  20498107 aaataacaaatacaatcaaaatgaagttaccttcaaacaaaaacaactggacaccgtacttcgcagctttggtgc 20498033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 26183478 - 26183144
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||||||||||||||||| ||||||||| || ||||| ||||  ||||||||||| |||||  |||||| |||||||||||||||||||||||||||    
T  26183478 tgaataaaatgtttcgaacactaagctaaca-aagacaagtaaaacacaaagcataaaagtaaatggcacagagagtttgttaacccagttcggtgcaac 26183380  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 198  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||    
T  26183379 gtcacctactctgggggctaccaagccaggaaggaaatacactagtgtagtccttattcaatagctctcagcaaacttctcgtttgcactatatgaccta 26183280  T
Q  199 ggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctca 298  Q
    | ||||||        ||||||||||||||||||| |||||||||||| ||||||| ||||||||||| ||| ||||||||||||||| |||||| ||||    
T  26183279 gaacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcactcctttaaaactgatcacagcccctgtgatactca 26183188  T
Q  299 aattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaa 341  Q
    |||  |||  |||||  ||||||||||||||| |||||||||||    
T  26183187 aataacaattacaatcaaaatgaagttacctttaaacaaaacaa 26183144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 66 - 339
Target Start/End: Complemental strand, 20741115 - 20740849
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||  |||||    
T  20741115 gcacagtgagtctgttaacccaattcggttcaacgtcacctactctgggggctaccaagcgaggagggaaatccactagtgtagtccttattctctagct 20741016  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    || |||||||||||||||| |||||| ||||||||||||| |||| ||       ||||||||||||| |||||||||||| ||||||||||||||||||    
T  20741015 ctcagcaaactcctcgtttacactaaagacctaggacctatccgt-ct-------tgacttcaacctaggaactcctagatctgagatctcatctcactc 20740924  T
Q  266 ccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaa--atgaagttaccttcaaacaaaac 339  Q
    || ||||||  |||||||| | ||||||| |||| ||   |||||||  ||  ||||||| |||||||||||||||    
T  20740923 cc-tacaaccaatcacagctcttgtgattatcaagttatcaacacaacaaaagatgaagtaaccttcaaacaaaac 20740849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 20845983 - 20845782
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||    
T  20845983 aaagtaaaaggcacacagagtttgttaacccagttcggtgcaacgtcacctactatgggggctaccaagtcaggaaggaaatccactagtgtagtcctta 20845884  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    ||||| | |||| |||||||||||||||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| |||||||    
T  20845883 ttcaaaatctctcagcaaactcctcgtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatc 20845792  T
Q  255 tcatctcact 264  Q
    | ||||||||    
T  20845791 ttatctcact 20845782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 22131022 - 22130877
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||    
T  22131022 aaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtaatcctta 22130924  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggac 202  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||    
T  22130923 ttctctagctctcagcaaactcctcgtttacactaaagacctaggac 22130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 22404940 - 22404749
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  22404940 cacaatgagtttgttgacccagttcggtgacaaacacacctgctctaggggctaccaagccaggaaggaaatccactagtatagtccttattcaatagct 22404841  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  22404840 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 22404749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 30605869 - 30605679
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||    
T  30605869 cacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaatccaggaaggaaatccactagtgcagtccttattctatagct 30605770  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| ||||||||||||||        || || ||| ||||| ||| |||||||||||| |||||||||||||||||    
T  30605769 ctcagcaaactcctcgtttacactaaagacctaggacctac--------ccatattgatttcaatctaggaactcctagatctgagatctcatctcact 30605679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 26329392 - 26329202
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| |||||||||||||  ||   ||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  26329392 cacagtgagtttgttgacccagttcggtgataaacacacctactctgtgagctaccaagccaggaaggaaatccactggtgtagtccttattctatagct 26329293  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| |||||||||||||||        |||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  26329292 ctcagcaaactcctcgtttacactaaagacctaggacctacc--------cgtattgatttcaacctaggaactcctagatctgagatcccatctcact 26329202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 26036794 - 26036936
Alignment:
Q  70 agtgagtttgttaacccagttcggtgcaacgt-cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 168  Q
    |||||||||||| ||||||||||||| ||    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||     
T  26036794 agtgagtttgttgacccagttcggtggaaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgttgtccttattctatagctctc 26036893  T
Q  169 agcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    ||||||||| |||||| |||||| |||||||||||||||||||    
T  26036894 agcaaactcatcgtttacactaaagacctaggacctacccgta 26036936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 24189843 - 24190034
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||| ||||||||| |||   ||| ||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||    
T  24189843 cacagtgagtttgttgacctagttcggtgacaaacacacatactctgggggctaccaagccgggaaggaaattcactagtgtagtctttattcaatagct 24189942  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||| ||||| ||||||| |||||||||    
T  24189943 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcatagatctgagatcccatctcact 24190034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 13735163 - 13734961
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  ||||||||||||||| ||||| ||||||| |||   ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |    
T  13735163 aaagtaaaagacacagtgagtttgttgacccacttcggtgacaaacacacctactctgggggttaccaagtcaggaaggaaatccattagtgtagtcctt 13735064  T
Q  155 attcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
    |||||| |||||| |||||||||||||||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||    
T  13735063 attcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagat 13734972  T
Q  254 ctcatctcact 264  Q
    | |||||||||    
T  13734971 cccatctcact 13734961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 25105599 - 25105453
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||| ||||| ||||||||||||| |||   ||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  25105599 cacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 25105500  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
     | |||||||||||||||| ||||| |||||||||||||||||||||    
T  25105499 ttcagcaaactcctcgtttacactatatgacctaggacctacccgta 25105453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 25164692 - 25164546
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||| ||||| ||||||||||||| |||   ||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  25164692 cacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 25164593  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
     | |||||||||||||||| ||||| |||||||||||||||||||||    
T  25164592 ttcagcaaactcctcgtttacactatatgacctaggacctacccgta 25164546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 13338573 - 13338762
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||||||||||||||||| |||   ||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||| ||    
T  13338573 cacagtgagtttgttaacccagttcggtgacaaacacacatactctgggg-ctaccaagccaggaaggaaatccactagtgtaatccttattctataact 13338671  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| |||||||||| |||        | ||| ||| ||| ||||| |||||||||||| |||||||||||||||||    
T  13338672 ctcagcaaactcctcgtttacactaaagacctaggacatac--------cggtattgatttctacctaggaactcctagatctgagatctcatctcact 13338762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 66 - 211
Target Start/End: Complemental strand, 23420741 - 23420594
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 164  Q
    ||||| |||||||| | ||||||||||||| |||   ||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  23420741 gcacaatgagtttgctgacccagttcggtgacaaatacacctactctaagggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagc 23420642  T
Q  165 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    ||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  23420641 tctcagcaaactcctcatttacactatatgacctaggacctacccgta 23420594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 77 - 339
Target Start/End: Complemental strand, 13942166 - 13941912
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||||| ||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||    
T  13942166 ttgttaacctagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 13942067  T
Q  176 tcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaac 274  Q
    ||||||||| | ||| |  ||||||||||||||||| || |       ||||||||||| |||||||||||| ||||||| ||||||| |  | |||||     
T  13942066 tcctcgtttacaacttaaaacctaggacctacccgt-ctac-------acttcaacctaggaactcctagatctgagatcccatctcattatcctacaat 13941975  T
Q  275 tgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaac 339  Q
      |||||| ||| ||||||||||| |||  ||||||||    |||||||||||||||||||||||    
T  13941974 caatcacaacccctgtgattctcagatt--aaacacaaaatgatgaagttaccttcaaacaaaac 13941912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 22184786 - 22184586
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||  |||||| |||||||||| ||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||||| |||| |||||||     
T  22184786 aaagtaaacggcacagagagtttgttatcccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaatccattagtctagtccga 22184688  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| | |||||| |||||||||||||||| |||| | |||||| |||||||        ||| | ||| ||||||||| |||||||||||| |||||||    
T  22184687 attctaaagctctcagcaaactcctcgtttacacttaagacctatgacctac--------ccgcattgatttcaacctaggaactcctagatctgagatc 22184596  T
Q  255 tcatctcact 264  Q
     |||||||||    
T  22184595 ccatctcact 22184586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 22246478 - 22246384
Alignment:
Q  118 taccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||    
T  22246478 taccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgta 22246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 11204712 - 11204781
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11204712 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 11204781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 264
Target Start/End: Original strand, 23623894 - 23624048
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||  ||||| |||||||| |||||||||||| ||| ||||||  ||||||||    
T  23623894 cacctactctgggggctactaacctaggaaggaaatccactagtgtagtcgttattctatagctctcagcaaactcctcatttacactaaatacctagga 23623993  T
Q  202 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||        ||||| ||| ||||||||| |||||| ||||| |||||||||||||||||    
T  23623994 cctac--------ccgtattgatttcaacctaggaactcttagatttgagatctcatctcact 23624048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 72 - 264
Target Start/End: Original strand, 18221096 - 18221281
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| | ||||||||||| |||   |||||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||| |     
T  18221096 tgagtttgttgatccagttcggtgacaaacacacctactttggggtctaccaagccaagaaggaaatccactagtgtagtccttattccatagctctcac 18221195  T
Q  171 caaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||| ||||||| |||||| ||||||||| ||||        | ||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  18221196 caaacttctcgtttacactaaagacctaggagctac--------cagtattgagttcaacctaggaactcctagatctgagatcccatctcact 18221281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 22252162 - 22252074
Alignment:
Q  124 gccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||||    
T  22252162 gccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgta 22252074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 264
Target Start/End: Complemental strand, 20714912 - 20714724
Alignment:
Q  70 agtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 168  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||| |  | |||     
T  20714912 agtgagtttgttgacctagttcggtgacaaacacacctactctgagggctaccaagtcaggtaggaaatccactagtgtagtccttattctaatgttctc 20714813  T
Q  169 agcaaactcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||||| | ||  | ||||||||||||||        ||||| ||| ||||||||| |||||||||||| |||||| ||||||||||    
T  20714812 agcaaactcctcgtttacaacacaagacctaggacctac--------ccgtattgatttcaacctaggaactcctagatctgagatttcatctcact 20714724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 264
Target Start/End: Original strand, 9522506 - 9522705
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||||  |||||||||||||||||||  |||| |||| ||| | |||||||||||||| || ||||||||| |||||||||||||| |    
T  9522506 aaagtaaaaggcacagttggtttgttaacccagttcggcacaac-tcacttacatttgggggctaccaagtcaagaaggaaattcactagtgtagtcctt 9522604  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| | || | | | |||||||||| ||| |    | |||||||||||||||||||      || ||||||||||||| |||||||||||| |||||||    
T  9522605 attcta-agttatcaacaaactcctcttttac----aagacctaggacctacccgta----tatattgacttcaacctaggaactcctagatctgagatc 9522695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 17661598 - 17661503
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||||||||| || ||||||||||||||||||||||| |||   |||||||| |||||||||||||||| |||||||||| ||||||||| ||||    
T  17661598 aagtaaaatgcatag-gagtttgttaacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagtgttgtcc 17661503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 24394622 - 24394690
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  24394622 tttgttaacccatttcggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatccacta 24394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 24117586 - 24117667
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 157  Q
    ||||||||||||||||||| |||   | |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  24117586 ttgttaacccagttcggtgacaaacacgcctactctggtggctaccaagccaggaatgaaatccactagtgtagtccttatt 24117667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 15116782 - 15116850
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||| ||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  15116782 tttgttgacccagttcagtgcaacctcacctacgtctgggggctaccaagtcaggaaggaaattcacta 15116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 22130879 - 22130790
Alignment:
Q  222 gacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaa 312  Q
    ||||||||||||  ||||||||||| ||||||| |||||||||||| ||||||  |||||||||| ||||||| |||  || |||||||||    
T  22130879 gacttcaacctagaaactcctagatctgagatcccatctcactccc-tacaaccaatcacagcccctgtgattatcaggttacaaacacaa 22130790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 9422646 - 9422549
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatag 163  Q
    |||| |||||||||| ||| ||||||||| |||   ||||||| ||||||| || ||||| |||||||||||||||||||||| |||| ||||||||||    
T  9422646 cacaatgagtttgttgacctagttcggtgacaaacacacctacatctggggact-ccaagtcaggaaggaaatccactagtgttgtccttattcaatag 9422549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 9422546 - 9422505
Alignment:
Q  223 acttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  9422546 acttcaacctatgaactcctagatctgagatcccatctcact 9422505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 22979868 - 22979917
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||| ||||||||||||| |||||| ||||| |||||||||||||||||    
T  22979868 ccgtattgacttcaacctaggaactcttagatctgagatctcatctcact 22979917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 20127026 - 20127093
Alignment:
Q  116 gctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 184  Q
    |||||||| | |||||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  20127026 gctaccaatctaggaaggaaatccactagtgtaatccttattcta-agttctcagcaaactcctcgttt 20127093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 22979736 - 22979811
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    ||||||||||||||||||| |||   |||||||| ||||| ||||||||| |||||| |||| ||||||||||||||    
T  22979736 ttgttaacccagttcggtgacaaacacacctactatgggg-ctaccaagcaaggaagcaaatacactagtgtagtcc 22979811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 11756373 - 11756301
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgta 148  Q
    |||||||||||||||||  ||||| |||||||| | ||||||||| |||| |||||||||||| |||| |||||    
T  11756373 tttgttaacccagttcgacgcaac-tcacctacatttgggggctaacaaggcaggaaggaaattcacttgtgta 11756301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 19006706 - 19006639
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||| |||||||||| |||||| || |||||||||| |||||  |||| ||||||||||||    
T  19006706 tttgttaacccatttcggtgcaatgtcaccgacatctgggggct-ccaagtaaggacggaaatccacta 19006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 19663578 - 19663646
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||| ||||||||||||||||| |||||||| | || ||||||| |||||| ||| ||||| |||||    
T  19663578 tttgttgacccagttcggtgcaacctcacctacatatgcgggctacaaagccatgaatgaaattcacta 19663646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 20286777 - 20286825
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcac 104  Q
    ||||||||  |||||||  |||||||||||||||||||| |||||||||    
T  20286777 aaagtaaatggcacagtcggtttgttaacccagttcggtacaacgtcac 20286825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 8748955 - 8749316
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||  ||| |||||||||||||||||| ||| ||||||||    
T  8748955 tgaataaaatgtttcgaacactaagctaacacaagaaaagaaaaatgcaaagcataaagtaaagggcatagtgagtttgttaacccaattcagtgcaacg 8749054  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    | | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8749055 ttagctactctggggactaccaagctaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaagctcctcgtttgcactaatgacctagg 8749154  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    | ||||        ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  8749155 atctac--------ccgtactaacttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatcacaacccctgtgattctcaaa 8749246  T
Q  301 ttgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  8749247 ttacaaacacaatgaaatgaagttaccttcaaacaaaacaactaaacaccgtaattcacagcttaggtgc 8749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 7 - 370
Target Start/End: Original strand, 9036629 - 9036984
Alignment:
Q  7 aaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacc 105  Q
    ||||||||||||||| ||||||| | || ||||||||||||||||||||||| ||  || ||||||||| |||||||||||||||||||||||| ||||     
T  9036629 aaatgtttcgaacactaagctaata-aagacaagaaaaatgcaaagcataaaagtggaaggcacagtgaatttgttaacccagttcggtgcaacatcaca 9036727  T
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 205  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9036728 tactctgggggctaccaaaccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaaagacctaggaccta 9036827  T
Q  206 cccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgca 305  Q
    |        ||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||    
T  9036828 c--------ccgtattgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaattgatcacaacccctgtgattctcaaattaca 9036919  T
Q  306 aacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||  |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  9036920 aattcaatgaaatgaagttaccatcaaacaaaacaactaaacaccgtacttcacagcttaggtgc 9036984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 312
Target Start/End: Complemental strand, 9031618 - 9031321
Alignment:
Q  7 aaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacc 105  Q
    ||||||||||||||| ||||||||| || |||||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  9031618 aaatgtttcgaacactaagctaaca-aagacaagaaaaacgcaaagcataaaagtaaaaagcacaatgagtttgttaacccagttcggtgcaacgtcacc 9031520  T
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 205  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  9031519 tactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgtgctaatgacctaggaccta 9031420  T
Q  206 cccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgca 305  Q
    |||||        ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||    
T  9031419 cccgt--------actgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaattgatcacatcccctgtgattctcaaattaca 9031328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 67 - 293
Target Start/End: Original strand, 13917825 - 13918041
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||  ||||||    
T  13917825 cacagagagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagcca-gaaggaaatccaatagtgtactccttattctctagctc 13917923  T
Q  167 ttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcc 266  Q
    | |||||| ||||||||| |||||| ||||||||||||||        | || |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  13917924 tcagcaaattcctcgtttacactaaagacctaggacctac--------ctgtcctgacttcaacctaggaactcctagatatgagatttcatctcactcc 13918015  T
Q  267 cttacaactgatcacagcccgtgtgat 293  Q
    | || |||  |||||||||| ||||||    
T  13918016 c-taaaaccaatcacagcccctgtgat 13918041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 67 - 211
Target Start/End: Original strand, 295441 - 295586
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  295441 cacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagct 295540  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    || |||||||||||||||| |||||| |||||||||||||||||||    
T  295541 ctcagcaaactcctcgtttacactaaagacctaggacctacccgta 295586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 56 - 337
Target Start/End: Original strand, 13913762 - 13914038
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||    
T  13913762 aaagtaaaaaacacagagagtttgttaacccggttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccgctagtgtactcctta 13913860  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||| ||||        ||||  | ||||||||||| |||||||||||| |||||| |    
T  13913861 ttctctagctctcagcaaactcctcgtttacactaaagacctaggatctac--------ccgttttaacttcaacctaggaactcctagatctgagattt 13913952  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacac-----aatgaaatgaagttaccttcaaacaaa 337  Q
    |||||||||||| || |||  |||||||||| ||||||  |||  || |||||||     ||| | |||||||||||||||||||||    
T  13913953 catctcactccc-tagaaccaatcacagcccctgtgatcatcaggttacaaacacaaacaaatcagatgaagttaccttcaaacaaa 13914038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 56 - 294
Target Start/End: Complemental strand, 7479324 - 7479096
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||| ||| |||||  |||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||    
T  7479324 aaagtgaaaagcacaaagagtttgttaactcagttcggtgcaacgtcgcctaatctgggggctaccaagccagga-ggaaatccactagtgtagtcctta 7479226  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||||||        || || |||||||||| |||||| |||||||| |||||||     
T  7479225 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctac--------ccatattgacttcaacatatgaagtcctagatctgagatcc 7479134  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgatt 294  Q
    |||||| ||||| ||||||  |||||| ||| |||||||    
T  7479133 catctccctccc-tacaaccaatcacatcccctgtgatt 7479096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 17702387 - 17702578
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17702387 cacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 17702486  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||      ||  ||||| |||||| |||||||||||| ||||||| |||||||||    
T  17702487 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttaaacctaggaactcctagatctgagatcccatctcact 17702578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 18064394 - 18064193
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  |||| |||||||||||||||||||||||| |||   |||||||||| | |||||||||| ||||||||||||||||||||||||||| |    
T  18064394 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagtgtagtcctt 18064295  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| |||||||| | |||||||||||||| |||||| |||||||||||||         ||||| ||| ||||||||| |||||||||||| |||||||    
T  18064294 attctatagctctcaacaaactcctcgtttacactaaagacctaggaccta--------accgtattgatttcaacctaggaactcctagatctgagatc 18064203  T
Q  255 tcatctcact 264  Q
    ||||||||||    
T  18064202 tcatctcact 18064193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 57 - 264
Target Start/End: Complemental strand, 6581054 - 6580854
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||||||| |||||   |||||||||||||||||||||| |||   |||||||||||  |||||||||||||| ||||||||||||||||||||||| ||    
T  6581054 aagtaaaaggcacaacaagtttgttaacccagttcggtgacaaacacacctactctgaaggctaccaagccagcaaggaaatccactagtgtagtcctta 6580955  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    ||| |||||||| |||||||||||||||| |||||| |||||||||||||||        |||| ||| ||||||||| |||||||||||| |||||||     
T  6580954 ttctatagctctcagcaaactcctcgtttacactaaagacctaggacctacc--------cgtattgatttcaacctaggaactcctagatctgagatcc 6580863  T
Q  256 catctcact 264  Q
    |||||||||    
T  6580862 catctcact 6580854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 13790660 - 13790851
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   |||||||| ||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  13790660 cacaatgagtttgttgacccagttcggtgacaaacacacctactatgggggctaccaagccaagaaggaaatatactagtgtagtccttattcaatagct 13790759  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  13790760 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 13790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 56 - 259
Target Start/End: Complemental strand, 7496115 - 7495921
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||  |||||||||||| |||||||||||||| || |||| | ||||||||| |||||||||| ||||||||||||||||||||| ||    
T  7496115 aaagtaaaaagcacaaagagtttgttaactcagttcggtgcaacatcgcctaatttgggggctatcaagccagga-ggaaatccactagtgtagtcctta 7496017  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||||||        || || ||||||||||||| |||||||||||| |||||||     
T  7496016 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctac--------ccatattgacttcaacctaggaactcctagatctgagatcc 7495925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 11558501 - 11558308
Alignment:
Q  61 aaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 159  Q
    ||||||||||| ||||||||||||| ||||||||| ||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11558501 aaaatgcacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattca 11558403  T
Q  160 atagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatc 259  Q
    | |||| | ||||||  || ||||||||||||||||||||||||||||           ||||| ||||||||| |||||||||||| ||||||| ||||    
T  11558402 aaagctttcagcaaa--ccacgtttgcactaatgacctaggacctacc-----------actgatttcaacctaggaactcctagatttgagatcccatc 11558316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 11567770 - 11567577
Alignment:
Q  61 aaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 159  Q
    ||||||||||| ||||||||||||| ||||||||| ||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11567770 aaaatgcacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattca 11567672  T
Q  160 atagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatc 259  Q
    | |||| | ||||||  || ||||||||||||||||||||||||||||           ||||| ||||||||| |||||||||||| ||||||| ||||    
T  11567671 aaagctttcagcaaa--ccacgtttgcactaatgacctaggacctacc-----------actgatttcaacctaggaactcctagatttgagatcccatc 11567585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 8224810 - 8224966
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||   ||||||||||||||||| ||   ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  8224810 aaagtaaaaggcacacaaagtttgttaacccagtttggcaaaac-tcacctacatctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 8224908  T
Q  155 attcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||    
T  8224909 attcaatagctctcagcaaactcctcgtttacactatatgacctaagacctacccgta 8224966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 15636051 - 15635860
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||| | ||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  15636051 cacaatgagtttgatgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcaatagct 15635952  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || || ||||||||||||| ||||| |||| ||||||||||||||||      ||  |||||||| ||| |||||||||||||||||||| |||| ||||    
T  15635951 ctcagtaaactcctcgtttacactatatgatctaggacctacccgta------ta--gacttcaaactaggaactcctagatatgagatcccatcacact 15635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 18547634 - 18547775
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| ||||| ||||||| |||   ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  18547634 tgagtttgttgacccaattcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattcaatagctcttgg 18547733  T
Q  171 caaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    |||||||||||||| ||||| |||||||| ||||||||||||    
T  18547734 caaactcctcgtttacactatatgacctaagacctacccgta 18547775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 28051121 - 28051307
Alignment:
Q  71 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    ||||||||||| |||||||| |||| |||   ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |    
T  28051121 gtgagtttgttgacccagtttggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattctatagctctca 28051220  T
Q  170 gcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||||| |||||| | |||||||| |||        | ||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  28051221 gcaaactcctcgtttacactaaaggcctaggacatac--------ctgtattgatttcaacctaggaactcctagatctgagatctcatctcact 28051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 56 - 211
Target Start/End: Complemental strand, 18035084 - 18034928
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  |||| |||||||||||||||||||||||| |||   |||||||||| | |||||||||||||||||||||||||||||||||||||| |    
T  18035084 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagtgtagtcctt 18034985  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||| |||| ||| |||||||||||| ||| ||| || |||||||||||||||||||    
T  18034984 attctataggtctcagcaaactcctcatttacaccaaagacctaggacctacccgta 18034928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 20748335 - 20748200
Alignment:
Q  72 tgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 171  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| || |||||| | |    
T  20748335 tgagtttgttaacccagttcggtgcaacatcacctactttgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattgaaaagctctcaac 20748237  T
Q  172 aaactcctcgtttgcac-taatgacctaggacctacc 207  Q
    |||||| |||||| ||| | |||||||||||||||||    
T  20748236 aaactcatcgtttacactttatgacctaggacctacc 20748200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 11656010 - 11656148
Alignment:
Q  74 agtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 173  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||||||||| ||| ||| |||||| |||||    
T  11656010 agtttgttaacccagtttggtgcaatgtcacctactctggaggctaccaagtcaggaaagaaattcactagtgtagtccttatccaaaagctctcagcaa 11656109  T
Q  174 actcctcgtttgcac-taatgacctaggacctacccgta 211  Q
    ||||||||||| ||| | |||||||||||||| ||||||    
T  11656110 actcctcgtttacactttatgacctaggacctgcccgta 11656148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 24195505 - 24195695
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgt-cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| ||    |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  24195505 cacaatgagtttgttgacccagttcggtgaaaaacacacctactctgggg-ctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 24195603  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||| ||| ||||| ||||||||||| ||||| |||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  24195604 ctcagcaaactcctcatttacactatatgacctaggagctacctgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 24195695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 23954730 - 23954544
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| | ||||||||||| |||   |||||||||||| |||||||||||||||||||||||||| |||| |||||  |||||||||||||| ||    
T  23954730 tgagtttgttgatccagttcggtggcaaacacacctactctggaggctaccaagccaggaaggaaatccattagtttagtcattattcaatagctctcag 23954631  T
Q  171 caaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||| ||||| ||||||||||||||||| |||      ||   ||||||||||| |||||||||||| ||||||| |||||||||    
T  23954630 caaactcctcgtttacactatatgacctaggacctacctgta------ta--tacttcaacctaggaactcctagatttgagatcccatctcact 23954544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 12054635 - 12054485
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||  || |||||||| || |||||||||| ||    
T  12054635 aaagtaaatggcacagtgagtttcttaacccagttcggtgcaatgtcacctactctaggggataccaagctcgg-aggaaatctacaagtgtagtcctta 12054537  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 207  Q
    |||  ||||||| |||||||||||||||| |||||| ||||| |||||||||    
T  12054536 ttctctagctctcagcaaactcctcgtttacactaaagaccttggacctacc 12054485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 17042924 - 17042786
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    |||||||||| |||||| |||| |||   |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| | ||    
T  17042924 agtttgttaaaccagtttggtgacaaacacacctactctggaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaaca 17042825  T
Q  173 aactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    ||||||||||||  ||||| |||||||||||||||||||    
T  17042824 aactcctcgtttaaactaaagacctaggacctacccgta 17042786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 18476901 - 18477055
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||  |||||||||||||||||||||  |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |    
T  18476901 aaagtaaaaggcacaaagagtttgttaacccagttcggcacaac-tcacctacatctgggg-ctaccaagccaggaaggaaatccactagtgtagtcctt 18476998  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||| | |||||| |||||||||||||||| |||| | ||| || ||||||| ||||    
T  18476999 attctaaagctctcagcaaactcctcgtttacacttaagacataagacctactcgta 18477055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 262
Target Start/End: Original strand, 44452461 - 44452650
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 164  Q
    |||| |||||||||| ||||||||||||| |||   ||||||| ||| |||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  44452461 cacaatgagtttgttgacccagttcggtgacaaacacacctacgtctaggggct-ccaagccaggaaggaaatccactagtgtagttcttattcaatagc 44452559  T
Q  165 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 262  Q
    ||| |||||||||||||||| ||||| |||||| | ||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||    
T  44452560 tctcagcaaactcctcgtttacactatatgacccatgacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctca 44452650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 19633915 - 19634012
Alignment:
Q  114 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| ||  |||||||||||||||    
T  19633915 gggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagatataggacctacccgta 19634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 13524853 - 13524714
Alignment:
Q  72 tgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 171  Q
    |||||||||| ||||||||||||   |   ||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||| |||| ||| |||    
T  13524853 tgagtttgttgacccagttcggtcacaaaacacctactctgggggctaccaagtcaagaaggaaatccactggtgtagtccttattctatagttctcagc 13524754  T
Q  172 aaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    ||||||||| ||| |||||| ||||||| ||||| |||||    
T  13524753 aaactcctcatttacactaaagacctagtacctatccgta 13524714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 19532025 - 19531950
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactc 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||    
T  19532025 cacctactttgggggctaccaagccaggaaggaaatccactagtgtcgtccttattcaatagctctcagaaaactc 19531950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 264
Target Start/End: Complemental strand, 21719054 - 21718913
Alignment:
Q  115 ggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 214  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | || | | | |||| ||||||||| |||| | ||||||||| |||||||| ||     
T  21719054 ggctaccaagccaggaaggaaatccactagtgtagtccttattctaaagttttcaacaaaatcctcgtttacacttaagacctaggatctacccgt-ct- 21718957  T
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
           ||||| |||||| |||||||||||| |||||||||||||||||    
T  21718956 ------agactttaacctaggaactcctagatctgagatctcatctcact 21718913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 10082461 - 10082375
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccact 142  Q
    ||||||||||||||    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  10082461 aagtaaaatgcacaagttgtttgttaacccagttcggtgcaacgtcacctacatctaggggctaccaagctaggaaggaaattcact 10082375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 31649682 - 31649814
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||| ||||||||||| |||   |||||||||||||  |||||||||||||||||||||||||| ||||||||| |||||  ||| ||| |||||||    
T  31649682 ttgttaatccagttcggtgacaaacacacctactctgggt-ctaccaagccaggaaggaaatccactcgtgtagtccttattc--tagttctcagcaaac 31649778  T
Q  176 tcctcgtttgc-actaatgacctaggacctacccgt 210  Q
    ||||||||| | |||   ||||||||||||||||||    
T  31649779 tcctcgtttacaactctagacctaggacctacccgt 31649814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 10189386 - 10189299
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||    |||||||||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||| |||||    
T  10189386 aagtaaaatgcacaagttgtttgttaacccagttcggtgcaacgtcacctacatgtaggggctaccaagctaggaaggaaattcacta 10189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 15686329 - 15686226
Alignment:
Q  73 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 171  Q
    ||||||||| |||||||||| || |||   |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| | || ||| |||    
T  15686329 gagtttgttgacccagttcgatgacaaacacacctactctaggggctaccaagccaggaaggaaatccattagtgtagtccttattctaaagttctcagc 15686230  T
Q  172 aaac 175  Q
    ||||    
T  15686229 aaac 15686226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 1919367 - 1919281
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 198  Q
    ||||||||||||||| ||||||||||||||  |||||||| |||||||||||| | ||||||||| |||||| ||||| ||||||||    
T  1919367 ggggctaccaagccaagaaggaaatccactgatgtagtccttattcaatagctttcagcaaactcttcgtttacactatatgaccta 1919281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 3552381 - 3552274
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||| ||||||||||| |||   |||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| | || ||| | |||||    
T  3552381 ttgttaatccagttcggtgacaaacgcacctactcttggggctaccaagccaggaagaaaatccagtagtgtagtccttattcta-agttctaaacaaac 3552283  T
Q  176 tcctcgttt 184  Q
    |||||||||    
T  3552282 tcctcgttt 3552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 8531382 - 8531450
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||||||||||||||||||||| |||||| |||  ||||||||| ||||||||||||||    
T  8531382 tttgttaacccagttcggtgcaacgtcacctacctctggtggcatccaagccagaaaggaaatccacta 8531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 151
Target Start/End: Complemental strand, 14406821 - 14406722
Alignment:
Q  53 cataaagtaaaatgcacagtgag-tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 150  Q
    |||||||||||| ||||| |||| |||||||||||||||||||| |||   |||||||| || |||||||||||||||||||||||||||| | ||||||    
T  14406821 cataaagtaaaaggcaca-tgaggtttgttaacccagttcggtgacaaacacacctactttgtgggctaccaagccaggaaggaaatccaccaatgtagt 14406723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 337
Target Start/End: Complemental strand, 287069 - 286807
Alignment:
Q  68 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    |||||||||||||||||| |||||| || |||   ||| |||| ||||| ||||||| ||||||||||||||||||||| |||||| ||||| |  | ||    
T  287069 acagtgagtttgttaacctagttcgatgacaaacacacttactatggggactaccaaaccaggaaggaaatccactagtatagtccttattctaatgttc 286970  T
Q  167 ttagcaaactcctcgttt-gcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    | || |||||||| ||||   ||  | |||||||||||||||||| ||        || ||||||||| |||||||||||| ||||||| |||||||||     
T  286969 tcaggaaactccttgtttataacacaagacctaggacctacccgt-ct-------agatttcaacctaggaactcctagatctgagatcccatctcacta 286878  T
Q  266 ccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaa 337  Q
     | ||  ||  |||||| ||| ||||||| ||| |||  ||||||||  | |||||||||||||||||||||    
T  286877 tcctaacaccaatcacaacccctgtgattatcagattcaaaacacaa-aagatgaagttaccttcaaacaaa 286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 20976147 - 20976090
Alignment:
Q  87 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  20976147 agttcggtgcaacttcacctacatctgggggctaccaaaccaggaaggaaatccacta 20976090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 980506 - 980456
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  980506 cacctattttgggggctaccaagcaaggaaggaaatccactagtgtagtcc 980456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 215382 - 215333
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  215382 ccgtattgacttcaacctaggaacttctagatatgagatctcatctcact 215333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 8147709 - 8147641
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||| ||||||||||| ||||||   ||| ||||||||||||||||||||||||| |||||    
T  8147709 tttgttaacccaattcggtgcaacttcacctttatctaggggctaccaagccaggaaggaaattcacta 8147641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 21094842 - 21094787
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||    
T  21094842 cacctactctgggg-ctaccaagtcaggaaggaaattcactagtgtagtccttattc 21094787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 42243780 - 42243831
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagc 125  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  42243780 gtttgttaacccagttcggtgcaacatcacctacatcttggggctaccaagc 42243831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 14406665 - 14406616
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||| |||||||| |||||||||||| ||||||| |||||||||    
T  14406665 ccgtactgacctcaacctaagaactcctagatctgagatcccatctcact 14406616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 19584078 - 19584010
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||||| |||||| ||||||||| ||| ||||   ||||||||||||| ||||||||||    
T  19584078 tttgttaacccagttcagtgcaatgtcacctacatctaggggaatccaagccaggaagaaaatccacta 19584010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 43902202 - 43902135
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||| ||| |||||||||||||||||||| | |||||||| |||||||||||| |||||| ||||    
T  43902202 tttgttaatccaattcggtgcaacgtcacctacatttgggggct-ccaagccaggaaagaaatctacta 43902135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 335
Target Start/End: Complemental strand, 21094730 - 21094619
Alignment:
Q  223 acttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaa-acacaatgaaatgaa 321  Q
    ||||||||||| |||||||||||| ||||||| | |||||||  | ||||| | |||||||||| | ||||| ||| |||  || ||| ||||||  |||    
T  21094730 acttcaacctaggaactcctagatctgagatcccgtctcactatcctacaattaatcacagcccctatgattatcatatttaaacacaaaatgaa--gaa 21094633  T
Q  322 gttaccttcaaaca 335  Q
    ||||||||||||||    
T  21094632 gttaccttcaaaca 21094619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 3445146 - 3445098
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 151  Q
    ||||||||||| || ||| |||| ||||||||||||||||||||||||||    
T  3445146 cacctactctgagg-ctatcaagtcaggaaggaaatccactagtgtagtc 3445098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 15962262 - 15962330
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||| |||||||||| ||||||||| |||   ||||||||||| ||||||||||| |||||    
T  15962262 gtttgttaacccacttcggtgcaatgtcacctacatct-aaggctaccaagctaggaaggaaattcacta 15962330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 18483444 - 18483403
Alignment:
Q  171 caaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgta 18483403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 40199885 - 40199922
Alignment:
Q  81 taacccagttcggtgcaacgtcacctactctgggggct 118  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  40199885 taacctagttcggtgcaacgtaacctactctgggggct 40199922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 20962214 - 20962162
Alignment:
Q  92 ggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||| ||||||    
T  20962214 ggtgcaacttcacctacatctgggggttaccaagtcaggaaggaaagccacta 20962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 21254097 - 21254029
Alignment:
Q  140 actagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacc 207  Q
    ||||||||||||| ||||| |||| ||| | |||||||||||||  | ||||| |||||||||||||||    
T  21254097 actagtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacc 21254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 233; Significance: 1e-128; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 369
Target Start/End: Original strand, 23541159 - 23541520
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  23541159 tgaataaaatgttttgaacactaagctaacacaacacaagaaaaatgcaaagcataaagtaaatggcacagtgagtttgttaacccagttcggtgcaacg 23541258  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  23541259 tcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgtttgcactaaagacctagg 23541358  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    ||||||        |||||||||||||||||   ||||  |||||| ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  23541359 acctac--------ccgtactgacttcaacccgggaacaactagatctgagatctcatctcactcccttacaactgatcatagcccctgtgatactcaaa 23541450  T
Q  301 ttgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtg 369  Q
    |  |||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  23541451 taacaaatacaatcaaaacgaagttaccttcaaacaaaacaactaaacaccgtacttcacaacttaggtg 23541520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 19895047 - 19894693
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  19895047 tgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgtaaagcataaagtaaaaggcacagtgagtttgttaacctagttcggtgcaacg 19894948  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    |||| |||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  19894947 tcacatactctaggagctaccaagccaggaacgaaatccactagtgtagttcgtattcaatagctctcagcaaactcctcgtttgaactaatgacctagg 19894848  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    ||||||||||        |||||||||||||||  |||||||| || ||||||| ||||||||||||||       |||||| ||| |||||||||||||    
T  19894847 acctacccgt--------actgacttcaacctagaaactcctaaatctgagatcccatctcactccctt-------atcacaacccctgtgattctcaaa 19894763  T
Q  301 ttgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  19894762 ttacaaacacaatgaaatgaagttaccttcaaacaaaacaactaaacgccgtacttcacagcttaggtgc 19894693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 24143049 - 24143406
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||| ||||||||||||||| ||||||||| || ||||| ||||  ||||||||||| |||||  |||||| ||||||||||||| |||||||||||||    
T  24143049 tgaatgaaatgtttcgaacactaagctaacaaaagacaagtaaaacacaaagcataaaagtaaatggcacagagagtttgttaacctagttcggtgcaac 24143148  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  24143149 gtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaaatcctcgtttgcactaatgacctag 24143248  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
    |||||||        |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| || |||||    
T  24143249 gacctac--------ccgtactgactttaacctatgaactcctagatctgagatcccatctcactcccttacaactgatcacagcccctgtaatactcaa 24143340  T
Q  300 attgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 364  Q
    ||  |||| |||||  |||||||| ||||||||||||| |||||| || ||||||||||| |||||    
T  24143341 ataacaaatacaatcaaaatgaagctaccttcaaacaacacaactgaacaccgtacttcacagctt 24143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 7 - 370
Target Start/End: Complemental strand, 25354874 - 25354517
Alignment:
Q  7 aaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggtgcaacgtcacc 105  Q
    |||||||| |||||| ||||||||| || ||||| ||||  |||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||    
T  25354874 aaatgttttgaacactaagctaacaaaagacaagtaaaacacaaagcataaaagtaaatgacacagtgagtttgttaacccagttcggtgcaacgtcacc 25354775  T
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||    
T  25354774 tactctgggggctaccaagccaggaaggaaatccactagtgtagttcgtattcaatatctctcagcaaactccttgtttgcactaatgacctaggaccta 25354675  T
Q  206 cccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgca 305  Q
    |||||        ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||  ||    
T  25354674 cccgt--------actgacttcaacctaggaactcctagatttgagatcacatctcactcccttacaactgatcacagcccctgtgatactcaaataaca 25354583  T
Q  306 aacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || |||||  |||||||||||||||||||||| |||||| || | ||||||||| ||||| |||||    
T  25354582 aatacaatcaaaatgaagttaccttcaaacaatacaactgaacatcgtacttcacagctttggtgc 25354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 11325390 - 11325031
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatg-cacagtgagtttgttaacccagttcggtgcaa 98  Q
    ||||| ||||||||||||||| ||||||||| || ||||| |||| |||||||||||| |||||| | ||||||||| ||||||||||  ||| ||||||    
T  11325390 tgaatgaaatgtttcgaacactaagctaaca-aagacaagtaaaacgcaaagcataaatgtaaaaagacacagtgagattgttaacccgattccgtgcaa 11325292  T
Q  99 cgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacct 197  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  11325291 cgtcacctgctctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatatgacct 11325192  T
Q  198 aggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctc 297  Q
    |||||||||        ||||||| ||||||||||| |||||| ||||| | ||||  ||||||||||||||||||||||||||||||| |||||| |||    
T  11325191 aggacctac--------ccgtactaacttcaacctaggaactcgtagatctaagattccatctcactcccttacaactgatcacagcccctgtgatactc 11325100  T
Q  298 aaattgcaaacacaat-gaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagctt 364  Q
    ||||  |||| |||||  |||||||||||||||||||| |||||||||  | ||||||||||| |||||    
T  11325099 aaataacaaatacaatcaaaatgaagttaccttcaaacaaaaacaactggacaccgtacttcacagctt 11325031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 369
Target Start/End: Original strand, 22554884 - 22555249
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatg-cacagtgagtttgttaacccagttcggtgcaa 98  Q
    ||||| ||||||||| ||||| ||||||||| || ||||| |||| |||||  ||||| |||||| | ||||||||||||||||||||||||||||||||    
T  22554884 tgaatgaaatgtttcaaacactaagctaaca-aagacaagtaaaacgcaaatgataaaagtaaaaagacacagtgagtttgttaacccagttcggtgcaa 22554982  T
Q  99 cgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-at-gacc 196  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| || ||||    
T  22554983 cgtcacctactctgaaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtatgcactatatggacc 22555082  T
Q  197 taggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattct 296  Q
    |||||||||         ||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||| |||||||||| ||||| |||||| ||    
T  22555083 taggaccta--------tccgtactgacttcaacctaggaactcgtagatctgagatcccatctcactcccttgcaactgatcatagcccctgtgatact 22555174  T
Q  297 caaattgcaaacacaat-gaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagcttaggtg 369  Q
    |||||  |||| |||||  ||||||||||| |||||||| |||||||||  | ||||||||||| ||||| ||||    
T  22555175 caaataacaaatacaatcaaaatgaagttatcttcaaacaaaaacaactggacaccgtacttcacagctttggtg 22555249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 46741987 - 46741783
Alignment:
Q  7 aaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacc 105  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||    
T  46741987 aaatgtttcgaacactaagctaaca-aagacaagaaaaatgcaaagcataaaagtaaaaggcacaatgagtttgttaacccatttcggtgcaacgtcacc 46741889  T
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 205  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  46741888 tactctgggggctaccaagccatgaaggaaatccactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcacttatgacctaggaccta 46741789  T
Q  206 cccgta 211  Q
    ||||||    
T  46741788 cccgta 46741783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 21478093 - 21478279
Alignment:
Q  71 gtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||    
T  21478093 gtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatacactagtgtagtccttattcaaaagctctcag 21478192  T
Q  171 caaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  21478193 caaactcctcgtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 21478279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 68 - 300
Target Start/End: Original strand, 11905077 - 11905299
Alignment:
Q  68 acagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 167  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  11905077 acagtgagtttgttaacccagttcggtgcaacgtcacctactttggggt-taccaagtcaggaaggaaatccactagtgcagtccttattcaatagctct 11905175  T
Q  168 tagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccc 267  Q
     || ||||| ||||||| |||||| |||||| ||| |||        | ||| ||||||||||||| |||||||||||| | ||||| ||||| ||||||    
T  11905176 cagtaaacttctcgtttacactaaagacctatgacttac--------ctgtattgacttcaacctaggaactcctagatcttagatcccatctaactccc 11905267  T
Q  268 ttacaactgatcacagcccgtgtgattctcaaa 300  Q
     ||||| | |||||||||| |||||||||||||    
T  11905268 -tacaaataatcacagcccatgtgattctcaaa 11905299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 25116804 - 25116997
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctac--caagccaggaaggaaatccactagtgtagtccgtattcaatag 163  Q
    |||| ||||||| || ||||||||||||| |||   |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  25116804 cacaatgagtttattgacccagttcggtgacaaacacacctactctgggggctacaccaagccaggaaggaaatccactagtgtagtccttattcaatag 25116903  T
Q  164 ctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 262  Q
    |||| |||||||| ||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||    
T  25116904 ctctcagcaaacttctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctca 25116995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 15700490 - 15700347
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactct-gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 164  Q
    ||||||||||||||| ||||||||||||| |||   |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15700490 cacagtgagtttgttgacccagttcggtgacaaacacacctactcttgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagc 15700391  T
Q  165 tcttagcaaactcctcgtttgcactaatgacctaggacctaccc 208  Q
    | | |||||||||||||||| |||||| ||||||||||||||||    
T  15700390 tttcagcaaactcctcgtttacactaaagacctaggacctaccc 15700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 33899167 - 33898976
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||| |||||||||||| ||||||| ||||||||| |||||||||  |||||||||||    
T  33899167 cacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactggtgtagtcctcattcaatagct 33899068  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||| | |||||||||||||||||    
T  33899067 cttagcaaacttctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctaggtttgagatctcatctcact 33898976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 74 - 264
Target Start/End: Original strand, 9068933 - 9069116
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    |||||||||||||||||||||  |||   |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| ||||    
T  9068933 agtttgttaacccagttcggtaacaaacacacctactctggaggctaccaagcgaggaaggaaatccactagtgtagtccttattctattgctctcagca 9069032  T
Q  173 aactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||| |||||| || |||||||||||        ||||| ||| ||||| ||| |||||||||||| |||||||||||||||||    
T  9069033 aactcctcgtttacactaaagatctaggacctac--------ccgtattgatttcaatctaggaactcctagatctgagatctcatctcact 9069116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 16383907 - 16384017
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  16383907 cacctactctgggggcttccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 16384006  T
Q  201 acctacccgta 211  Q
    |||||||||||    
T  16384007 acctacccgta 16384017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 211
Target Start/End: Original strand, 28019285 - 28019431
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||| | |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  28019285 cacaatgagtttgttgacccagttcggtgacaaacacacatgctctgggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 28019384  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    || |||||||||||||||| ||||| |||||||||||| ||||||||    
T  28019385 ctcagcaaactcctcgtttacactatatgacctaggacatacccgta 28019431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 10190872 - 10191013
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||    
T  10190872 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaccagtgtagtccttattcaatagctctaag 10190971  T
Q  171 caaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    |||||||||||||| ||||| ||||| |||||| ||| ||||    
T  10190972 caaactcctcgtttacactatatgacataggacttactcgta 10191013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 23400325 - 23400182
Alignment:
Q  114 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtac 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||     
T  23400325 gggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgta- 23400227  T
Q  213 tgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
         ||  |||||||||||| |||||||||||| ||| ||| |||||||||    
T  23400226 -----ta--gacttcaacctaggaactcctagatctgatatcccatctcact 23400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 233 - 370
Target Start/End: Complemental strand, 46739278 - 46739146
Alignment:
Q  233 atgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa 332  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||     |||||||||||||| |||| ||||| ||||||||||||||||||    
T  46739278 atgaactcctagatctgagatctcatctcactcccttaaaactgatcacag-----gtgattctcaaattacaaatacaataaaatgaagttaccttcaa 46739184  T
Q  333 acaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    |||||||||||||| ||| ||||||| | |||||||||    
T  46739183 acaaaacaactaaacaccatacttcacaacttaggtgc 46739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 8163763 - 8163956
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggcta-----ccaagccaggaaggaaatccactagtgtagtccgtattcaat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||     |||||||||||||||||| |||||||| ||||| |||||||     
T  8163763 cacagtgagtttgttaacccagttcggtgcaacgtcacctactct-agggctaccaagccaagccaggaaggaaattcactagtgcagtccttattcaaa 8163861  T
Q  162 agctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctc 261  Q
    |||||  |||||||||||||||| |  | |||||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||| ||||||    
T  8163862 agctcccagcaaactcctcgtttacctttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctc 8163953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 13399481 - 13399338
Alignment:
Q  68 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    |||||||||||||| ||||||||||||| |||   |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | |||||    
T  13399481 acagtgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagctc 13399382  T
Q  167 ttagcaaactcctcgtttgcactaatgacctaggacctacccgt 210  Q
    | |||||||||||||||| |||| | ||| ||||||||||||||    
T  13399381 tcagcaaactcctcgtttacacttaagacttaggacctacccgt 13399338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 18618258 - 18618150
Alignment:
Q  103 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagga 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||| ||||| |||||||||||    
T  18618258 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactcctcgtttacactatatgacctagga 18618159  T
Q  202 cctacccgt 210  Q
    | |||||||    
T  18618158 catacccgt 18618150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 56 - 264
Target Start/End: Original strand, 10721954 - 10722154
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| | | || |||||| ||||||||||||||  |||| |||||||| ||| |||| |||||| |||||||||||||| ||||||||||||| |    
T  10721954 aaagtaaaaggtatagagagtttattaacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtcctt 10722052  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| | |||||| | |||||||||||||| |||| | |||||||||||||||||||      ||  |||||||||||| |||||||||||| |||||||    
T  10722053 attctaaagctctcaacaaactcctcgtttacacttaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatc 10722144  T
Q  255 tcatctcact 264  Q
    ||||||||||    
T  10722145 tcatctcact 10722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 10724241 - 10724430
Alignment:
Q  68 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    |||||||||||||| ||| ||||||||| |||   |||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||    
T  10724241 acagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctc 10724340  T
Q  167 ttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    | |||||||||||| ||| || ||| ||||||  |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  10724341 tcagcaaactcctcatttacattaaagacctaaaacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 10724430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 56 - 264
Target Start/End: Original strand, 10935723 - 10935923
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| | | || |||||| ||||||||||||||  |||| |||||||| ||| |||| |||||| |||||||||||||| ||||||||||||| |    
T  10935723 aaagtaaaaggtatagagagtttattaacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtcctt 10935821  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| | |||||| | |||||||||||||| |||| | |||||||||||||||||||      ||  |||||||||||| |||||||||||| |||||||    
T  10935822 attctaaagctctcaacaaactcctcgtttacacttaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatc 10935913  T
Q  255 tcatctcact 264  Q
    ||||||||||    
T  10935914 tcatctcact 10935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 10938010 - 10938199
Alignment:
Q  68 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    |||||||||||||| ||| ||||||||| |||   |||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||    
T  10938010 acagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctc 10938109  T
Q  167 ttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    | |||||||||||| ||| || ||| ||||||  |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  10938110 tcagcaaactcctcatttacattaaagacctaaaacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 10938199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 33745933 - 33746089
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||   ||||||||||| |||||||||| |||   |||||||| ||| ||||||||||| |||||||||||||||||||||||||| |    
T  33745933 aaagtaaaaggcacaacaagtttgttaacacagttcggtgacaaaaacacctactatggaggctaccaagctaggaaggaaatccactagtgtagtcctt 33746032  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||  |||||||| || ||| ||||||||| |||||| |||||||||||||||||||    
T  33746033 attttatagctctcagtaaattcctcgtttacactaaagacctaggacctacccgta 33746089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 110 - 264
Target Start/End: Original strand, 19659463 - 19659610
Alignment:
Q  110 ctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctaccc 208  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||      
T  19659463 ctgggggccaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacat 19659562  T
Q  209 gtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||       ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  19659563 gtt------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 19659610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 56 - 211
Target Start/End: Complemental strand, 15162677 - 15162521
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  |||| | |||||||| ||| ||||||||| |||   ||||||||||||||||| |||| ||| |||||||||||||||||||||||| |    
T  15162677 aaagtaaaagacacaataagtttgttgacctagttcggtgacaaacacacctactctgggggctgccaacccaagaaggaaatccactagtgtagtcctt 15162578  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||| ||| |||| | ||||||| |||||| |||||| |||| || |||||||||||    
T  15162577 attctataactctcaacaaactcttcgtttacactaaagaccgagaacctacccgta 15162521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 10198439 - 10198239
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||| |||||||   | ||||||||| ||||||||| |||   |||||||||| ||| ||||||||||||||||||||||||| |||||||||| |    
T  10198439 aaagtaaagtgcacaggaggattgttaacctagttcggtgacaaacacacctactctaggg-ctaccaagccaggaaggaaatccaccagtgtagtcctt 10198341  T
Q  155 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
    |||| | || ||| ||||||||||  |||| | |||   |||||||||||||||||| ||       ||||||||||||| |||||||||||| ||||||    
T  10198340 attcta-agttctcagcaaactccaagtttacaactctagacctaggacctacccgt-ct-------tgacttcaacctaggaactcctagatctgagat 10198250  T
Q  254 ctcatctcact 264  Q
    |||||||||||    
T  10198249 ctcatctcact 10198239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 33737973 - 33738053
Alignment:
Q  76 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||||||||||||||||||| |||   |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  33737973 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagtgtagtccgta 33738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 19183809 - 19183722
Alignment:
Q  116 gctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 203  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| | |||||| || |||| |||||| |||||||||||    
T  19183809 gctaccaagccaggaaggaaatccactagtgtattctgtattctatagctctcaacaaacttcttgtttacactaaagacctaggacc 19183722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 50907840 - 50907977
Alignment:
Q  75 gtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 173  Q
    |||||||||| |||||||||| |||   ||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||| | || | | |||||    
T  50907840 gtttgttaactcagttcggtgacaaacacacctactctgagggctaccaagtcaggaagaaaatccactagtgtagtccttattcta-agttatcagcaa 50907938  T
Q  174 actcctcgtttgc-actaatgacctaggacctacccgta 211  Q
    ||||||||||| | |||   |||||||||||||||||||    
T  50907939 actcctcgtttacaactctagacctaggacctacccgta 50907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 13268835 - 13268904
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  13268835 gtttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 13268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 41785404 - 41785524
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||||||| || ||||||||| ||||||||| ||| |||   ||| ||||  |||||||||||||||| |||||||||||||||||||||||| |    
T  41785404 aaagtaaaatgcatagagagtttgttgacccagttctgtgacaaacacacatactacgggggctaccaagccaagaaggaaatccactagtgtagtccct 41785503  T
Q  155 attcaatagctcttagcaaac 175  Q
    |||| | || ||| |||||||    
T  41785504 attctaaagttctcagcaaac 41785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 32861664 - 32861746
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 184  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||| | || ||| | ||||||||||||||    
T  32861664 cacctactctaggggctaccaagtcaggaagaaaatccactagtgtagtccttattctaaagttctcaacaaactcctcgttt 32861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 11865283 - 11865215
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||| |||||    
T  11865283 tttgttaacccagttcggtgcaacgtcttctacgtctgggggctaccaagccaggaagaaaattcacta 11865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 24608696 - 24608764
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||  | |||||||| |||||    
T  24608696 tttgttaacccagttcggtgcaacgtcacctacgtctggggactaccaagcttgaaaggaaattcacta 24608764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 76 - 261
Target Start/End: Original strand, 2679839 - 2680013
Alignment:
Q  76 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaa 174  Q
    |||||||||||||| ||||| |||   |||||||||||||||| ||||||  ||||||||||||||||| |||||||| | ||| | || ||| ||||||    
T  2679839 tttgttaacccagtacggtgacaaacacacctactctgggggcaaccaagttaggaaggaaatccactattgtagtccttgttcta-agttctcagcaaa 2679937  T
Q  175 ctcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctc 261  Q
    ||||  ||||  ||| || || ||||||||||         |||||||||||||||||| || ||||||||| ||||||||||||||    
T  2679938 ctccaagttt--act-atcacataggacctac--------tcgtactgacttcaacctaggagctcctagatctgagatctcatctc 2680013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 16655481 - 16655405
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 179  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||| | || ||| |||||||||||    
T  16655481 cacctactctaggggctaacaagccaagaaggaaatccactagggtagtccttattcta-agttctcagcaaactcct 16655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 17871665 - 17871604
Alignment:
Q  83 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| |||||||||||| |||||    
T  17871665 acccagttcggtgcaacttcacctacatctgagggctaccaagtcaggaaggaaattcacta 17871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 11289525 - 11289438
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactag 144  Q
    |||||||| |||||  | ||||||||||||||||||||||||||||||| || ||| |||| || |||||||||||| |||| ||||||    
T  11289525 aagtaaaaggcacatggtgtttgttaacccagttcggtgcaacgtcaccaacgtct-ggggttaacaagccaggaagaaaattcactag 11289438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 13875961 - 13876031
Alignment:
Q  73 gagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||| |||| |||||||| | ||||||    ||||||||||||||||||||||||| |||||    
T  13875961 gagtttgttaacctagtttggtgcaacttaacctacatatggggctaccaagccaggaaggaaattcacta 13876031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 19564825 - 19564893
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacct-actctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||| |||||||||||| || | ||| | || |||||||||| |||||||||||||||    
T  19564825 tttgttaacccagtttggtgcaacgtcatctaagtctagaggttaccaagccaagaaggaaatccacta 19564893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 3290928 - 3290564
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||||||||||||||||| ||||||||| || ||||| ||||  ||||||||||| |||||  ||||||||||||||||||||||||| ||||||||    
T  3290928 tgaataaaatgtttcgaacactaagctaacaaaagacaagtaaaacacaaagcataaaagtaaatggcacagtgagtttgttaacccagtttggtgcaac 3290829  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 198  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||    
T  3290828 gtcaccaactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttttcactatatgaccta 3290729  T
Q  199 ggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctca 298  Q
    ||||||||        ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  3290728 ggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatctcatttcactcccttacaactgatcacagcccctgtgatactca 3290637  T
Q  299 aattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||| ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3290636 aatagcaaatacaatcaaaatgaagttaccttcaaacaaaacaactaaataccgtacttcacagcttaggtgc 3290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 358
Target Start/End: Original strand, 7620004 - 7620347
Alignment:
Q  9 atgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac 108  Q
    ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7620004 atgtttcgaacactaagctaacataggacaagaaaaatgcaaagcataaagtaaaaggcacagtgagtttgttaacccagttcggtgcaacgtcacctac 7620103  T
Q  109 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 208  Q
    | ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |||      
T  7620104 tttggaggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaaatcctcgtttgcactaatgacctaggacttac-- 7620201  T
Q  209 gtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaac 308  Q
          ||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| ||| | ||||||| ||||| |||||    
T  7620202 ------ccgtactaacttcaacctaggaactcctagatctgagatcccatctcactcccttacaactgatcacaacccctatgattcttaaattacaaac 7620295  T
Q  309 acaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttca 358  Q
    ||||| ||||||||||||||||||  |||||||||||||| |||||||||||    
T  7620296 acaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtacttca 7620347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 48797863 - 48797506
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa--gtaaaatg-cacagtgagtttgttaacccagttcggtgca 97  Q
    ||||| ||||||||||||||| ||||||||| || ||||| ||||  |||||||||||  |||||| | ||||||||||||||||||||||||| |||||    
T  48797863 tgaatgaaatgtttcgaacactaagctaaca-aagacaagtaaaactcaaagcataaaaagtaaaaaggcacagtgagtttgttaacccagttcagtgca 48797765  T
Q  98 acgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacct 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  48797764 acgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaatgacct 48797665  T
Q  198 aggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctc 297  Q
    |||||||||||||        ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  48797664 aggacctacccgt--------actgacttcaacctaggaactcctagatctgagatctcat-tcactcccttacaactgatcacaacccctgtgattctc 48797574  T
Q  298 aaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 364  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  48797573 aaattacaaatacaatcaaaatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagctt 48797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 14975348 - 14975711
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaag-taaaatgcacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||| |||||| |||||| ||||||||| || ||||| ||||  |||||||||||  ||||  |||||  || ||||||||||||||||||||||||    
T  14975348 tgaataagatgttttgaacactaagctaaca-aagacaagtaaaacacaaagcataaaaataaacagcacacagattttgttaacccagttcggtgcaac 14975446  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 199  Q
    ||||||||||| |||||| |||| |||||||| |||||| ||||||||| ||| |||||||||||||| | |||||| ||||||||||||||||||||||    
T  14975447 gtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctcgtttgcactaatgacctag 14975546  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
    |||||||        ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||| ||||  |||||||||||    
T  14975547 gacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaaatgatcactgccccagtgattctcaa 14975638  T
Q  300 attgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||| |||||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  14975639 attacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtacttcacagctttggtgc 14975711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 15404824 - 15405187
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaag-taaaatgcacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||| |||||| |||||| ||||||||| || ||||| ||||  |||||||||||  ||||  |||||  || ||||||||||||||||||||||||    
T  15404824 tgaataagatgttttgaacactaagctaaca-aagacaagtaaaacacaaagcataaaaataaacagcacacagattttgttaacccagttcggtgcaac 15404922  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 199  Q
    ||||||||||| |||||| |||| |||||||| |||||| ||||||||| ||| |||||||||||||| | |||||| ||||||||||||||||||||||    
T  15404923 gtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctcgtttgcactaatgacctag 15405022  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
    |||||||        ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||| ||||  |||||||||||    
T  15405023 gacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaaatgatcactgccccagtgattctcaa 15405114  T
Q  300 attgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||| |||||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  15405115 attacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtacttcacagctttggtgc 15405187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 14984589 - 14984938
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||| |||||| |||||| ||||||||| || ||||| || |  |||||||||||   ||||| ||||  |||||||||||||||||||||||||||    
T  14984589 tgaataagatgttttgaacactaagctaaca-aagacaagtaaca--caaagcataaaaataaatggcacatagagtttgttaacccagttcggtgcaac 14984685  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||  |||||||||||||||||||    
T  14984686 gtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactccctgtttgcactaatgacctag 14984785  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
     ||||||        ||||||||||||||||||| ||| |||||||| ||||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  14984786 aacctac--------ccgtactgacttcaacctaggaattcctagatctgagatcccatctcacgcccttacaactgatcacaacccctgtgattctcaa 14984877  T
Q  300 attgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttca 358  Q
    ||| |||||||||| ||||||||||||||||||  |||||||||||||| | |||||||||    
T  14984878 attacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacatcgtacttca 14984938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 15414200 - 15414549
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||| |||||| |||||| ||||||||| || ||||| || |  |||||||||||   ||||| ||||  |||||||||||||||||||||||||||    
T  15414200 tgaataagatgttttgaacactaagctaaca-aagacaagtaaca--caaagcataaaaataaatggcacatagagtttgttaacccagttcggtgcaac 15414296  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||  |||||||||||||||||||    
T  15414297 gtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactccctgtttgcactaatgacctag 15414396  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
     ||||||        ||||||||||||||||||| ||| |||||||| ||||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  15414397 aacctac--------ccgtactgacttcaacctaggaattcctagatctgagatcccatctcacgcccttacaactgatcacaacccctgtgattctcaa 15414488  T
Q  300 attgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttca 358  Q
    ||| |||||||||| ||||||||||||||||||  |||||||||||||| | |||||||||    
T  15414489 attacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacatcgtacttca 15414549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 66 - 370
Target Start/End: Original strand, 11628620 - 11628915
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||  |||||||| ||||||||||||    
T  11628620 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactttgggggttaccaaactaggaaggaaatccactcttgtagtccttattcaatagct 11628719  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| |||| ||||||||||||   ||||| || ||||||    
T  11628720 cttagcaaactcctcgtttgcactatatgacctaggacctac--------ccgtactgacttcagcctaggaactcctagatcgaagatcccacctcact 11628811  T
Q  265 cccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 364  Q
    |||||||||||||||||| ||| ||||||||||||| | |||| ||||| |||||||||||||||||||||||  ||||||  ||||||||||| |||||    
T  11628812 cccttacaactgatcacaacccctgtgattctcaaaatacaaaaacaatcaaatgaagttaccttcaaacaaa--aactaatcaccgtacttcacagctt 11628909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 294
Target Start/End: Original strand, 42782747 - 42782957
Alignment:
Q  77 ttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaact 176  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  42782747 ttgttaacccagttcggtgcaatgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaact 42782846  T
Q  177 cctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaact 275  Q
    ||||||||||| || ||||||||||||||||        ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||     
T  42782847 cctcgtttgcaatatatgacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaacc 42782938  T
Q  276 gatcacagcccgtgtgatt 294  Q
     |||||||||| |||||||    
T  42782939 aatcacagcccctgtgatt 42782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 77 - 263
Target Start/End: Original strand, 30226076 - 30226256
Alignment:
Q  77 ttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30226076 ttgttaacccagttcggtgcaacgtcacctacatctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 30226175  T
Q  176 tcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcac 263  Q
    ||||||||||||||| ||||||||||||||||        ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  30226176 tcctcgtttgcactatatgacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcac 30226256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 56 - 337
Target Start/End: Original strand, 9564227 - 9564503
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||    
T  9564227 aaagtaaaaggcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctacaaagccagg-aggaaatccaatagtgtagtcctta 9564325  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||||||| ||| || ||||||||||||||||     |||    ||||||||||||| |||||||||||| |||||||     
T  9564326 ttctctagctctcagcaaactcctcgtttacacaaaagacctaggacctaccc-----gcc---ttgacttcaacctaggaactcctagatctgagatcc 9564417  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacac-----aatgaaatgaagttaccttcaaacaaa 337  Q
    |||||||||||| ||||||  |||||| |||  |||||| |||  || |||||||     ||| | |||||||||||||||||||||    
T  9564418 catctcactccc-tacaaccaatcacatccccggtgattatcaggttacaaacacaaacaaatcagatgaagttaccttcaaacaaa 9564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 66 - 300
Target Start/End: Complemental strand, 11560683 - 11560457
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||| | ||||||||||||    
T  11560683 gcacagtgagtttgttaacccagttcggtgcactgtcacctactctgggggctaccaagctaggaaggaaatccgctattgtagtgcttattcaatagct 11560584  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    || || ||||||||| ||| |||||| ||||||  |||||||        |||| ||||||||||||| |||||||| ||| ||| ||||||||||||||    
T  11560583 ctcagtaaactcctcatttacactaaagacctacaacctacc--------cgtattgacttcaacctaggaactcctggatctgatatctcatctcactc 11560492  T
Q  266 ccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    |||| ||| | |||||||||  |||||||||||||    
T  11560491 ccttgcaaataatcacagcctctgtgattctcaaa 11560457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 13455289 - 13455099
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  13455289 cacaatgagtttgttaacctagttcggtgcaacgtcacctactctgggggctaccaagcaaggaaggaaatccactagtgtagtccttattcaaaagctc 13455190  T
Q  167 ttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || ||||||||||||||| ||| | ||||| |||||||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  13455189 ttggcaaactcctcgtttacactttatgacttaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 13455099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 60 - 312
Target Start/End: Complemental strand, 4794772 - 4794527
Alignment:
Q  60 taaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 159  Q
    ||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||     
T  4794772 taaaaagcacagagagttttttaacccagttcagtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtccttattct 4794674  T
Q  160 atagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacct---atgaactcctagatatgagatctc 256  Q
     |||||||  | ||||||||||||| |||||| |||||||||||||||||| ||       ||||||||||||   | |||||||||||| ||||||| |    
T  4794673 ctagctctcggaaaactcctcgtttacactaaagacctaggacctacccgt-ct-------tgacttcaacctaggaggaactcctagatctgagatcgc 4794582  T
Q  257 atctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaa 312  Q
    ||||||||||| ||||||  |||||||||| ||||||| |||  || |||||||||    
T  4794581 atctcactccc-tacaaccaatcacagcccctgtgattatcaggttacaaacacaa 4794527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 56 - 312
Target Start/End: Original strand, 9566876 - 9567122
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||| ||    
T  9566876 aaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgttacctactcagggggctaccaagccagg-aggaaatccacaagtgtagtcctta 9566974  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||| ||| |||||| |||||||||||||||| | ||       ||| ||||||||| |||||| ||||| |||||||     
T  9566975 ttctctagctctcagcaaactcctcatttacactaaagacctaggacctacccat-ct-------tgagttcaacctaggaactcatagatctgagatcc 9567066  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaa 312  Q
    |||||||||||| ||||||  |||||| ||| ||||||| |||  || |||||||||    
T  9567067 catctcactccc-tacaaccaatcacaacccctgtgattatcaggttacaaacacaa 9567122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 10658353 - 10658505
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| ||||||  |||||||||||||||||| ||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  10658353 aaagtaaaaggcacagcaagtttgttaacccagttccgtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtcctt 10658452  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 207  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||||||||||    
T  10658453 attctatagctctcagcaaactcctcgtttacactaaagacctaggacctacc 10658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 4458720 - 4458911
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||||||| |||||| ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  4458720 cacagtgaatttgttgaccgagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattcaaaagct 4458819  T
Q  166 cttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||| | |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  4458820 ctcagcaaactcctcgtttacactttatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 4458911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 15436037 - 15436172
Alignment:
Q  74 agtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 173  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||    
T  15436037 agtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaaaggaaatccactagtgtagtccttattcaaaagctctcagcaa 15436136  T
Q  174 actcctcgtttgcac-taatgacctaggacctaccc 208  Q
    ||||||||||| ||| | ||||| ||||||||||||    
T  15436137 actcctcgtttacactttatgacttaggacctaccc 15436172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 61 - 211
Target Start/End: Original strand, 15506243 - 15506394
Alignment:
Q  61 aaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaa 160  Q
    |||| ||||||  |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||||    
T  15506243 aaaaggcacaggaagtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaatggaaatccactagtgtagtccttattcaa 15506342  T
Q  161 tagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccgta 211  Q
     |||||| |||||||||||||||| ||  | |||||||||||||||||||||    
T  15506343 aagctctcagcaaactcctcgtttacattttatgacctaggacctacccgta 15506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 20991523 - 20991662
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||    
T  20991523 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattttatagct 20991622  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggaccta 205  Q
    || |||||||||||||||| |||||| |||||||||||||    
T  20991623 ctcagcaaactcctcgtttacactaaagacctaggaccta 20991662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 11521588 - 11521442
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| |||||||| |||| |||   |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  11521588 cacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagccaggaaggaaatctactagtgtagtccttattcaatagct 11521489  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  11521488 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 11521442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 56 - 264
Target Start/End: Original strand, 42636217 - 42636418
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||   |||||||||||| ||||||||| |||    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |    
T  42636217 aaagtaaaaggcacatcaagtttgttaaccaagttcggtgacaaacatacctactctggaggctaccaagcaaggaaggaaatccactagtgtagtcctt 42636316  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| |||||||| ||||||||||| |||| |||||| ||||||||||||||        || || ||| ||||||||| |||||||||||| |||||||    
T  42636317 attctatagctctcagcaaactccttgtttacactaaagacctaggacctac--------ccatattgatttcaacctaggaactcctagatctgagatc 42636408  T
Q  255 tcatctcact 264  Q
    ||||||||||    
T  42636409 tcatctcact 42636418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 14926635 - 14926773
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    ||||||||||||||||| |||| ||    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||    
T  14926635 agtttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagca 14926734  T
Q  173 aactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||||||||||| || ||| |||||||||||||||||||    
T  14926735 aactcctcgtttacagtaaagacctaggacctacccgta 14926773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 15350101 - 15350239
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    ||||||||||||||||| |||| ||    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||    
T  15350101 agtttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagca 15350200  T
Q  173 aactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||||||||||| || ||| |||||||||||||||||||    
T  15350201 aactcctcgtttacagtaaagacctaggacctacccgta 15350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 16208023 - 16207913
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| | |||||||||     
T  16208023 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagc 16207924  T
Q  201 acctacccgta 211  Q
    |||||||||||    
T  16207923 acctacccgta 16207913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 645114 - 645305
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| ||| |||||||||||||||| ||| |||   |||||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  645114 cacaatgaatttgttaacccagttcagtgacaaacacacctactatgggggctacgaagccaggaaggaaatccaccagtgtagtccttattcaatagct 645213  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||| ||||||| ||||| |||||||||||||| ||||||      ||  || ||||||||| |||||||||||| ||||||| |||||||||    
T  645214 ctcagcaaacttctcgtttacactacatgacctaggacctccccgta------ta--gatttcaacctaggaactcctagatctgagatcccatctcact 645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 11588445 - 11588636
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| |||||| |||||| |||   |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11588445 cacagtgagtttgttgacccagctcggtgacaaacacacctactctagcggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 11588544  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||    ||||||||||||| |||||  ||||||||||||||||||||      ||  |||||||||||| ||||||||| || ||||||| |||||||||    
T  11588545 ctctaaaaactcctcgtttacactatttgacctaggacctacccgta------ta--gacttcaacctaggaactcctatatctgagatcccatctcact 11588636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 211
Target Start/End: Original strand, 16436755 - 16436900
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||||| ||||||| |||   |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||  |||||    
T  16436755 cacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagct 16436854  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    || | |||||||||| ||| |||||| |||||||||||||||||||    
T  16436855 ctcaacaaactcctcatttacactaaagacctaggacctacccgta 16436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 102 - 264
Target Start/End: Complemental strand, 29546279 - 29546125
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| |||||||| ||||||| |||||| |||||||||    
T  29546279 cacctactctcggggctaccaagccaggaaggaaatccactactgtagtccttattctataactctcagcaaacttctcgtttacactaaagacctagga 29546180  T
Q  202 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||      ||  ||||| | |||| |||||||||||| |||||||||||||||||    
T  29546179 cctacccgta------ta--gactttagcctaggaactcctagatctgagatctcatctcact 29546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 262
Target Start/End: Original strand, 11998860 - 11999049
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 164  Q
    |||| |||||||||| |||||||||| || |||   ||||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  11998860 cacaatgagtttgttgacccagttcgatgacaaacacacctacgtccgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagc 11998958  T
Q  165 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 262  Q
    ||| | |||||||||| ||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||    
T  11998959 tctcaacaaactcctcatttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctca 11999049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 10279832 - 10279983
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  10279832 cacctactctgggg-ctaccaagccaggaaggaaattcaccagtgtagtccttattctatagctctcagcaaactcctcgtttgcactaaatacctagga 10279930  T
Q  202 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 262  Q
    ||||         ||||| ||| ||||||||| |||||| ||||| |||||||||||||||    
T  10279931 ccta--------tccgtattgatttcaacctaggaactcgtagatctgagatctcatctca 10279983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 26133103 - 26133000
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  |||| |||||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  26133103 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatccactagtgtagtcctt 26133004  T
Q  155 attc 158  Q
    ||||    
T  26133003 attc 26133000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 14165193 - 14165337
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| |||| |||| |||||||||||    
T  14165193 ggggctacatagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgatctagaacctacccgta 14165292  T
Q  212 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
          ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  14165293 ------ta--gacttcaacctaggaactcctagatctgagatcacatctcact 14165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 2076496 - 2076565
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2076496 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2076565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 2082915 - 2082984
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2082915 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2082984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 23175050 - 23174966
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  23175050 gtttgttaacccagttcggtgcaacatcacctacatctaggggctaccaagccaggaaggaaatccactagtgtagtccttattc 23174966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 7586718 - 7586563
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| ||||||  | |||||| ||||||||||||| |||    ||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  7586718 aaagtaaaaggcacagacaatttgttgacccagttcggtgacaaacatacctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtcctt 7586620  T
Q  155 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 210  Q
    |||| | |  ||| |||||| ||||||||| | ||| | ||||||||||||||||||    
T  7586619 attctaaacttctcagcaaaatcctcgtttacaacttaagacctaggacctacccgt 7586563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 24813914 - 24813997
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 157  Q
    ||||||||||||||||||||||||| | |||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24813914 gtttgttaacccagttcggtgcaacatgacctacataggggggctaccaagccaggaaggaaatccactagtgtagtccttatt 24813997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 15708142 - 15708243
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||||  |||||||||||||||| |||||||| |||||| | ||||||| ||||||||| |||||||||||||||||||||||||| |    
T  15708142 aaagtaaaaggcacagttggtttgttaacccagtttggtgcaac-tcacctgcatctggggtctaccaagctaggaaggaaatccactagtgtagtcctt 15708240  T
Q  155 att 157  Q
    |||    
T  15708241 att 15708243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 333
Target Start/End: Original strand, 24049572 - 24049691
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatg 314  Q
    ||||| ||||||||||||| |||||||||||| ||||||| |||||||||||| ||||| | |||||||||| |||||||||||  || || |||||||     
T  24049572 ccgtattgacttcaacctaggaactcctagatctgagatcacatctcactccc-tacaaataatcacagcccctgtgattctcagtttacagacacaatc 24049670  T
Q  315 aaa--tgaagttaccttcaaa 333  Q
    |||  ||||||||||||||||    
T  24049671 aaagttgaagttaccttcaaa 24049691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 31269224 - 31269148
Alignment:
Q  75 gtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 150  Q
    ||||||||||||||||||||| |||  |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31269224 gtttgttaacccagttcggtgacaaactcacctactccgggggctaccaagccatgaaggaaatccactagtgtagt 31269148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 12325845 - 12325936
Alignment:
Q  117 ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacc 207  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||| ||| ||| | ||||||| |||||||||    
T  12325845 ctaccaagccaggaaggaaatccactagtgtagtcattattcaaaagctctcagcaaactcctcatttacactttatgaccttggacctacc 12325936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 23057196 - 23057273
Alignment:
Q  76 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||||||||||||||||| |||   ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23057196 tttgttaacccagttcggtgacaaacacacctactctgagggctaccaagccaggaaggaaattcactagtgtagtcc 23057273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 26195645 - 26195518
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||| |||| ||||| |||| ||| |    
T  26195645 aaagtaaaacgcacagttggtttgttaacccagttcggtgcaac-tcacctacatctggaggctaccaagccaagaagaaaattcactactgtattcctt 26195547  T
Q  155 attcaatagctcttagcaaactcctcgttt 184  Q
    |||| | || ||| |||||| |||||||||    
T  26195546 attcta-agttctcagcaaattcctcgttt 26195518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 264
Target Start/End: Complemental strand, 9894208 - 9894054
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 200  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||| | || ||| |||||| |||  |||| | ||| | ||||||||    
T  9894208 cacctactctggggactaccaagtcagtaaggaaatccactagtgtagtccttattcta-agttctcagcaaattccaagtttacaacttaagacctagg 9894110  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||        ||||| ||||||||||||| |||||||||||| ||||||| |||||||||    
T  9894109 acatac--------ccgtattgacttcaacctaggaactcctagatctgagatcccatctcact 9894054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 4547924 - 4547851
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatcc 139  Q
    ||||| |||||||||||||||| |||| ||||||  |||||||||| ||||||| |||||||||||||||||||    
T  4547924 gcacaatgagtttgttaacccaattcgatgcaacagcacctactctaggggctatcaagccaggaaggaaatcc 4547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 20597013 - 20596918
Alignment:
Q  56 aaagtaaaatgcaca-gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 150  Q
    ||||||||| ||||| |||| |||||||||| ||||||||| |||   |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20597013 aaagtaaaaggcacaagtga-tttgttaaccgagttcggtgacaaacacacctactctgggggctaccaagccaagaaggaaatcgactagtgtagt 20596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 20925222 - 20925138
Alignment:
Q  123 agccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 207  Q
    ||||| ||||||||||||||||| | |||| ||||| |||||||| | |||||||||||||| |||||| |||||| ||||||||    
T  20925222 agccaagaaggaaatccactagtttcgtccttattctatagctctcaacaaactcctcgtttacactaaagacctaagacctacc 20925138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 261
Target Start/End: Original strand, 23956847 - 23957045
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||| ||||||||| ||| ||||||||| |||   || ||||| | | |||||||||||||||||| ||||||||||||||||||| |    
T  23956847 aaagtaaaaggcacagagagtttgttgacctagttcggtgacaaacacatctactttagaggctaccaagccaggaagaaaatccactagtgtagtcctt 23956946  T
Q  155 attcaatagctcttagcaaactcctcgtttgcac--taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgaga 252  Q
    |||| | || ||| |||||||  | ||||| ||   | | ||||||||||||||||||       ||  |||||||||||| |||||||||||| |||||    
T  23956947 attctaaagttctcagcaaac--cacgtttacaactttaagacctaggacctacccgtc------ta--gacttcaacctaggaactcctagatctgaga 23957036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 7508426 - 7508501
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 151  Q
    |||||||||||||||| || |||   |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7508426 ttgttaacccagttcgatgacaaacacacctacttttggggctaccaagccaggaaggaaatccactagtgtagtc 7508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 23580121 - 23579941
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||||||||||||||| | |   |||||||| |||||| |||||||||| |||||||||| ||||||||||||| ||||  | || | | |||||||    
T  23580121 ttgttaacccagttcggtgactaacacacctactatgggggttaccaagccaagaaggaaatctactagtgtagtccttatttta-agttttcagcaaac 23580023  T
Q  176 tcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||| | ||||   ||||||||||||||||| ||       ||| ||||||||| |||||||||||| || ||||||||||||||    
T  23580022 tcctcgtttacaactataaacctaggacctacccgt-ct-------tgaattcaacctaagaactcctagatctgggatctcatctcact 23579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 24902078 - 24902178
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| ||||||  |||||||| ||||||||| ||| |||   |||||| | | |||||||||||||||||||||||||||||||||||||||| |    
T  24902078 aaagtaaaaggcacag--agtttgttgacccagttcagtgacaaacacacctattataggggctaccaagccaggaaggaaatccactagtgtagtcctt 24902175  T
Q  155 att 157  Q
    |||    
T  24902176 att 24902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 10251431 - 10251513
Alignment:
Q  77 ttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    |||||||||||||||||||  ||   |||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||    
T  10251431 ttgttaacccagttcggtgataaacacacctactctggaggctaccaagccaggaaggaaatcttctagtgtagtccttattc 10251513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 12505697 - 12505766
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tct-gggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  12505697 tttgttaacccagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 20588895 - 20588695
Alignment:
Q  56 aaagtaaaatgcacag-tgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||||||||| ||| ||||||||| ||||||||||  |    | ||||| |||||||||||||||||||||||||||| ||||||||||||  |    
T  20588895 aaagtaaaatgcacagatga-tttgttaactcagttcggtgacaaacaaactactttgggggctaccaagccaggaaggaaatcaactagtgtagtcgtt 20588797  T
Q  155 attcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
     ||| | || ||| | ||||||||  |||| || || || |||||||||||||         || ||| ||||||||||| |||||||||||| ||||||    
T  20588796 gttcta-agttctcaacaaactccaagtttacaatatatcacctaggacctac--------tcgcactaacttcaacctaagaactcctagatctgagat 20588706  T
Q  254 ctcatctcact 264  Q
    |||||||||||    
T  20588705 ctcatctcact 20588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 23082915 - 23082842
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||    
T  23082915 cacctactctacgggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 23082842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 10309631 - 10309583
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 150  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10309631 cacctactctgggggctaccaagccaagaaggaagtccactagtgtagt 10309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 10260298 - 10260231
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccact 142  Q
    ||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||||| ||||    
T  10260298 tttgttaactcagttcggtgcaacttcaccttcatctgggggctaccaaaccaggaaggaaattcact 10260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 14687339 - 14687433
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 151  Q
    |||||||||||| || ||| ||||||||| ||||||||| |||   |||||||| ||| ||||||||||| ||||||||||| |||||||||||||    
T  14687339 aagtaaaatgcatag-gaggttgttaacctagttcggtgacaaacacacctactatggaggctaccaagctaggaaggaaattcactagtgtagtc 14687433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 6045340 - 6045393
Alignment:
Q  104 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  6045340 cctactctgggg-ctaccaagccaggaagaaaatccactagtgtagtccttattc 6045393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 10038861 - 10038677
Alignment:
Q  111 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccg 209  Q
    |||||||||| |||| |  ||||||||||||||||||||||| ||||| | || |||  |||||||| |||||| || || | |||||||||||| | ||    
T  10038861 tgggggctactaagcaaataaggaaatccactagtgtagtccttattctaaagttctcggcaaactcttcgtttacaacttaagacctaggacctgctcg 10038762  T
Q  210 tactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaatt 302  Q
    |       ||  |||||||||||| |||||||||||| ||||||| |||||||||  | |||||   |||||||||| ||||||| |||||||    
T  10038761 tc------ta--gacttcaacctaagaactcctagatctgagatcccatctcactatcctacaatcaatcacagcccctgtgattatcaaatt 10038677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 9732905 - 9732836
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| |||||| |||||||||||||||  ||||||||||||||||||| ||| ||||| |||||    
T  9732905 gtttgttaactcagttcagtgcaacgtcacctagatctgggggctaccaagccatgaacgaaattcacta 9732836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 12484267 - 12484336
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tct-gggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| ||||||||| |||||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  12484267 tttgttaaccaagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12484336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 19353122 - 19353193
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 148  Q
    |||||||||||||||| || ||||  ||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  19353122 ttgttaacccagttcgatgacaaca-cacctactctgagggctactaagccaagaaggaaatccactagtgta 19353193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 21260503 - 21260614
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    |||||||| | ||||||||||| |||   ||||||||||||||||||||||   |||||| ||||||| ||||||||||| ||||| | || ||| | ||    
T  21260503 agtttgttgatccagttcggtgacaaacacacctactctgggggctaccaacttaggaagaaaatccattagtgtagtccttattctaaagttctcaaca 21260602  T
Q  173 aactcctcgttt 184  Q
    |||| |||||||    
T  21260603 aactactcgttt 21260614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 11407091 - 11407041
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    ||||||||||||||||||||| |||||||||||| ||| ||| ||||||||    
T  11407091 cacctactctgggggctaccatgccaggaaggaagtccgctaatgtagtcc 11407041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 31269090 - 31269044
Alignment:
Q  218 tactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||    
T  31269090 tactgatttcaacctaggaactcctagatctgagatctcatctcact 31269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 2392947 - 2392878
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||| |||||||||||||||||||||||| | || |||||||||||| | ||| ||||| |||||    
T  2392947 gtttgttaatccagttcggtgcaacgtcacctacgtttgagggctaccaagctaagaatgaaattcacta 2392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 5299140 - 5299205
Alignment:
Q  79 gttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||| ||| |||| || ||||  ||| |||||||||||||||||||||||||||||||    
T  5299140 gttaacccagtttggtacaacatcgcctagatctaggggctaccaagccaggaaggaaatccacta 5299205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 21546971 - 21546902
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||||| ||||||| |||||||| ||||| ||||||||||  ||| ||||||| |||||    
T  21546971 gtttgttaacccagttccgtgcaacttcacctacatctggaggctaccaagttagggaggaaattcacta 21546902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 23057328 - 23057377
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||| || | |||||||||||| |||||||||||||||||    
T  23057328 ccgtactgacttcagccgaggaactcctagatttgagatctcatctcact 23057377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 7508562 - 7508605
Alignment:
Q  221 tgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  7508562 tgacttcaacctaggaactcctagatctgagatcccatctcact 7508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 23296631 - 23296674
Alignment:
Q  221 tgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  23296631 tgacttcaacctaggaactcctagatctgagatcccatctcact 23296674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 26132942 - 26132903
Alignment:
Q  225 ttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  26132942 ttcaacctaggaactcctagatctgagatctcatctcact 26132903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 14687492 - 14687538
Alignment:
Q  218 tactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||||| |||||||||||| ||||||  |||||||||    
T  14687492 tactgacttcaacctaggaactcctagatctgagattccatctcact 14687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 24902234 - 24902276
Alignment:
Q  222 gacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||| |||||||||||| ||||||| |||||||||    
T  24902234 gacttcaacctaggaactcctagatctgagatcccatctcact 24902276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 24049508 - 24049572
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctacc 121  Q
    ||||||||  |||||||||||||| ||||| || |||||||||| ||||||||| || ||||||||    
T  24049508 aaagtaaatggcacagtgagtttgctaacctag-tcggtgcaacatcacctactttgagggctacc 24049572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 10660986 - 10661034
Alignment:
Q  216 cgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  10660986 cgtattgatttcaacctaggaactcctagatctgagatcccatctcact 10661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 11406986 - 11406938
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcac 263  Q
    ||||| ||||||||||||| |||||||||||| ||||||  ||||||||    
T  11406986 ccgtattgacttcaacctaggaactcctagatctgagattccatctcac 11406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 228; Significance: 1e-125; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 8726776 - 8727121
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||                |||||    
T  8726776 tgaataaaatgtttcgaacaccaagctaacataagacaagaaaaatgcaaagcataaagtaaaagggacagtgagtttg----------------caacg 8726859  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  8726860 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccatattcaatagctctcagcaaactcctcgtttgcactaacgacctagg 8726959  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    ||||||||||| ||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  8726960 acctacccgtaatg--------acttcaacctatgaactcctagatctgagatctcatctcactcccttacaactgatcacaacccgtgtgattctcaag 8727051  T
Q  301 ttgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  8727052 ttacaaacacaatgaaatgaagttaccttcaaacaaaacaactaaacactgtacttcacagcttaggtgc 8727121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 17279801 - 17280166
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaa---tgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgca 97  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||||   | ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17279801 tgaataaaatgtttcgaacactaagctaccacaagacaagaaaaaaaattcaaagcataaagtaaaaggcacagagagtttgttaacccagttcggtgca 17279900  T
Q  98 acgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacct 197  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17279901 acgtcacctactctgggggataccaagccaggaaggaaatccactagtgtagttcgtattcaatagctctaagcaaactcctcgtttgcactaatgacct 17280000  T
Q  198 aggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctc 297  Q
    |||||||||        || |||||||||||||||| ||||| |||||| ||||||| ||||||| ||||||||||||||||||||||| | |||| |||    
T  17280001 aggacctac--------ccatactgacttcaacctaggaacttctagatctgagatcccatctcagtcccttacaactgatcacagcccctttgatactc 17280092  T
Q  298 aaattgcaaacacaatgaa-atgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||||  |||| ||||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17280093 aaataacaaatacaatcaatatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagcttaggtgc 17280166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 39080881 - 39081242
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||||| |||||| |||||  ||||||||| || ||||| ||||  |||||||||||   ||||| ||||| |||||||||||| |||| |  ||||||    
T  39080881 tgaataagatgttttgaacattaagctaaca-aagacaagtaaaacacaaagcataaaaataaatggcacagagagtttgttaactcagtacaatgcaac 39080979  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||||    
T  39080980 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttgcactaatgacctag 39081079  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
     ||||||        ||||||||||||||||||| ||||| |||||| ||||||| ||||||||| ||||||||||||||||||||| | ||||||||||    
T  39081080 aacctac--------ccgtactgacttcaacctaggaactactagatctgagatcccatctcactaccttacaactgatcacagcccctatgattctcaa 39081171  T
Q  300 attgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  39081172 attacaaatacaatgaaatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagcttaggtgc 39081242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 56 - 370
Target Start/End: Complemental strand, 17880928 - 17880620
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |    
T  17880928 aaagtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggggggctaccaagccaagaaggaaatccactagtgtagttctt 17880829  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||        ||||||||||||||||||| |||||||||||| |||||||    
T  17880828 attcaatagctctcagcaaactcctcgtttgcactaatgacctaggaacgac--------ccgtactgacttcaacctaggaactcctagatctgagatc 17880737  T
Q  255 tcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgta 353  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||| ||||||| |||||||| |||||||| ||||||| ||||||    
T  17880736 tcatctcactcccttacaactgatcacaacccctgtgattctcaaattacaaatacaatcaaatgaatttaccttcaaaacaaaataactaaacaccgta 17880637  T
Q  354 cttcagagcttaggtgc 370  Q
    ||||| ||||| |||||    
T  17880636 cttcacagctttggtgc 17880620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 37155770 - 37155406
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaac 99  Q
    ||||| ||||||||| ||||| ||||||||| || ||||| ||||  ||||| ||||| |||||  |||||  |||||||||| |||||||||||  |||    
T  37155770 tgaatgaaatgtttcaaacactaagctaacaaaagacaagtaaaacacaaagaataaaagtaaatggcacaaagagtttgttagcccagttcggtataac 37155671  T
Q  100 gtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 198  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  37155670 gtcacctactctgggggctaccaagccaggaaggaaattcactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcactatatgaccta 37155571  T
Q  199 ggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctca 298  Q
    ||||||||        ||||||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||| | | |||||| ||||    
T  37155570 ggacctac--------ccgtactgacttcaacctaggaactccaagatctgagatcccatctcactcccttacaactgatcacaacgcctgtgatactca 37155479  T
Q  299 aattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    ||| ||||| |||||  |||| ||||||||||||||||||||||||||| ||  ||||||| | |||||||||    
T  37155478 aatagcaaatacaatcaaaataaagttaccttcaaacaaaacaactaaacacaatacttcacaacttaggtgc 37155406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 56 - 369
Target Start/End: Complemental strand, 33466348 - 33466043
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  33466348 aaagaaaaaggcacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtcctta 33466249  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||||        | ||||||||||||||||| |||||||||||| ||||| |     
T  33466248 ttcaaaagctctcagcaaacttctcgtttgcactaatgacctaggacctac--------cggtactgacttcaacctaggaactcctagatctgaga-cc 33466158  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttca-aacaaaacaactaaataccgtac 354  Q
    |||||||||||||||||| | |||||||||| ||||||||||| |||  | ||||||| ||||||||||||||||| ||||||||||||||  ||||| |    
T  33466157 catctcactcccttacaaataatcacagcccctgtgattctcagattatagacacaatcaaatgaagttaccttcagaacaaaacaactaatcaccgtgc 33466058  T
Q  355 ttcagagcttaggtg 369  Q
    |||| ||||| ||||    
T  33466057 ttcacagctttggtg 33466043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 24091938 - 24092128
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||| ||||||||| |||   |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||||    
T  24091938 cacagtgagtttgttgacctagttcggtgacaaacacacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattctacagct 24092037  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| ||||||||||||||        ||||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  24092038 ctcagcaaactcctcgtttacactaaagacctaggacctac--------ccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 24092128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 102 - 264
Target Start/End: Original strand, 22476247 - 22476402
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 200  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  22476247 cacctactttgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 22476346  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||| ||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  22476347 acctacccata------ta--gacttcaacctaggaactcctagatttgagatcccatctcact 22476402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 56 - 268
Target Start/End: Original strand, 1683948 - 1684150
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||   |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||    
T  1683948 aaagtaaaaggcacaagaagtttgttaacccaattcggtgcaacgtcacctactctggcg-ctaccaagccagga-ggaaatccactagtgtagtcctta 1684045  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  || |||  |||||||||||||||| |||||| |||||||| | ||||||| ||       ||||||||||||| |||||||||| | |||||||     
T  1684046 ttctctaactcccagcaaactcctcgtttacactaaagacctaggtcatacccgt-ct-------tgacttcaacctaagaactcctagttctgagatcc 1684137  T
Q  256 catctcactccct 268  Q
    |||||||||||||    
T  1684138 catctcactccct 1684150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 22874206 - 22874307
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtac 212  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22874206 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcatttgcactaatgacctaggacctacccgtac 22874305  T
Q  213 tg 214  Q
    ||    
T  22874306 tg 22874307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 11221445 - 11221260
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||| ||||||||| |||   |||||||||||||||||||||| |||||||||||||     |||||||||| ||||| ||||||    
T  11221445 cacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccaggaaggaaat-----agtgtagtccttattctatagct 11221351  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| |||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  11221350 ctcagcaaactcctcgtttacactaaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 11221260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 375 - 469
Target Start/End: Original strand, 8734332 - 8734426
Alignment:
Q  375 accacaaaatttgctcaaatagccataaattgattagaaacaaaatagcattaagatgatgtatttgatgtgacattaccatcatatatctctgc 469  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  8734332 accacaaaatttgctcaaatatccataaattgattagaaacaaaatagcattaagatgatgtatttgatgtgatattaacatgatatatctctgc 8734426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 23249705 - 23249806
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  23249705 aaagtaaaaggcacaacgagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagccaagaaggaaatccactagtgtagtcctta 23249804  T
Q  156 tt 157  Q
    ||    
T  23249805 tt 23249806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 33977043 - 33977184
Alignment:
Q  71 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    ||||||||||| ||||||||||||  |||   ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||| |    
T  33977043 gtgagtttgttgacccagttcggtaacaaacgcacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctca 33977142  T
Q  170 gcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||||||||| |||| |||||| ||||||| |||||||||||    
T  33977143 gcaaactccttgtttacactaaagacctagaacctacccgta 33977184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 9996469 - 9996625
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  |||||  |||||||||||||||||||||| |||   |||||||||||| | |||||||| |||||| ||||||||||| |||||||| |    
T  9996469 aaagtaaaagacacagcaagtttgttaacccagttcggtgacaaacacacctactctggagactaccaagtcaggaatgaaatccactattgtagtcctt 9996568  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||| |||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  9996569 attctatagctctcagcaaactcctcatttacactaaagacctaggacctacccgta 9996625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 23541589 - 23541443
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||| ||||||||| |||   |||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||    
T  23541589 cacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccgggaaggaaatccactagtgtagtacttattcaatagct 23541490  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    || |||||||||  ||||| ||||| || ||||||||||||| ||||    
T  23541489 ctcagcaaactcgccgtttacactatattacctaggacctactcgta 23541443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 13660513 - 13660359
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||| | |||||| |||||||||||||||| | |||| ||||| |||    
T  13660513 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13660415  T
Q  202 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| ||||||||||    
T  13660414 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcactc 13660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 13719156 - 13719002
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||| | |||||| |||||||||||||||| | |||| ||||| |||    
T  13719156 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13719058  T
Q  202 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| ||||||||||    
T  13719057 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcactc 13719002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 56 - 210
Target Start/End: Original strand, 25240375 - 25240531
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| | ||| |||||||||| ||||||||||||| |||   |||||||   |||||||||||| ||||||||||||||||| |||||||||| |    
T  25240375 aaagtaaaaggtacattgagtttgtttacccagttcggtgacaaacacacctaccaagggggctaccaaaccaggaaggaaatccaccagtgtagtcctt 25240474  T
Q  155 attcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 210  Q
    |||||| |||||| |||||||||||  ||| ||| | | ||||||||||||||||||    
T  25240475 attcaaaagctctcagcaaactccttctttacactttacgacctaggacctacccgt 25240531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 12814734 - 12814626
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | || ||| |||||||||||||||| | |||   ||||||||    
T  12814734 cacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcta-agttctcagcaaactcctcgtttacaactgtagacctagg 12814636  T
Q  201 acctacccgt 210  Q
    ||||||||||    
T  12814635 acctacccgt 12814626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 293
Target Start/End: Complemental strand, 23864637 - 23864426
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 173  Q
    |||| |||||||| || |||||||| |||||||| |||||||| ||||||| ||||||| ||||||||||||||||||| ||||| | || ||| |||||    
T  23864637 gttttttaacccaatttggtgcaacatcacctacatctgggggataccaagtcaggaagaaaatccactagtgtagtccttattcta-agttctcagcaa 23864539  T
Q  174 actcctcgtttgcactaat-gacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttaca 272  Q
    |||||||| || || |  | ||||||||||||||        ||||  ||||||||||||| |||||||||||| ||||||| |||||||||  | ||||    
T  23864538 actcctcgcttacaattctagacctaggacctac--------ccgttttgacttcaacctaggaactcctagatctgagatcccatctcactttcctaca 23864447  T
Q  273 actgatcacagcccgtgtgat 293  Q
    |   |||||||||| ||||||    
T  23864446 atcaatcacagcccatgtgat 23864426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 264
Target Start/End: Original strand, 22485177 - 22485305
Alignment:
Q  129 gaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttc 227  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||  || |||||      ||  ||||||    
T  22485177 gaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggaattatccgta------ta--gacttc 22485268  T
Q  228 aacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||| |||||||||||| ||||||| |||||||||    
T  22485269 aacctaagaactcctagatctgagatcccatctcact 22485305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 33961746 - 33961860
Alignment:
Q  71 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    ||||||||||| ||||||||||||  |||  |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||  || |    
T  33961746 gtgagtttgttgacccagttcggtaacaaactcacctactctgggggctaccacgtcaggaaggaaatcaactagtgtagtccgtattctataggactca 33961845  T
Q  170 gcaaactcctcgttt 184  Q
     ||||||||| ||||    
T  33961846 acaaactccttgttt 33961860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 1562556 - 1562459
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    ||||||||| ||||||   ||||||||||||||||||| | |||   |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1562556 aaagtaaaaagcacaggaggtttgttaacccagttcggcgacaaacacacctactttgggggctaccaagccaggaaggaaatccactagtgtagtcc 1562459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 45133645 - 45133729
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 150  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45133645 cacattgagtttgttgacccagttcggtgacaaacacacctactctgggggctatcaagccaggaaggaaatccactagtgtagt 45133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 24850603 - 24850493
Alignment:
Q  73 gagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 171  Q
    |||||||||||||||||| ||  |||| |||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| | || | | |||    
T  24850603 gagtttgttaacccagtttggcacaac-tcacctacatatgggggctaccaagctaggaaggaaatccactagtgtagtccttattcta-agttatcagc 24850506  T
Q  172 aaactcctcgttt 184  Q
    |||||||||||||    
T  24850505 aaactcctcgttt 24850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 126 - 264
Target Start/End: Complemental strand, 27925564 - 27925434
Alignment:
Q  126 caggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgact 225  Q
    ||||||||||||||||||||||||||| ||||| |||||||| | |||||||| | ||| ||| || ||| |||||||||||||||      ||  ||||    
T  27925564 caggaaggaaatccactagtgtagtccttattctatagctctcaacaaactccacatttacaccaaagacataggacctacccgta------ta--gact 27925473  T
Q  226 tcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||| |||| |||||||||||| ||||||| |||||||||    
T  27925472 tcatcctaggaactcctagatctgagatcccatctcact 27925434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 45136184 - 45136286
Alignment:
Q  154 tattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
    ||||| |||||||| |||||||||||| ||| |||||| |||||||||||||||||||      ||  |||||||||||| |||||||||||||||||||    
T  45136184 tattcgatagctctcagcaaactcctcatttacactaaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatatgagat 45136275  T
Q  254 ctcatctcact 264  Q
    | |||||||||    
T  45136276 cccatctcact 45136286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 20255054 - 20254943
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    |||||||| ||||||||||||| |||   ||  |||| ||||||||||||||| ||||||||||||||||||||| |||| ||||| | || ||| ||||    
T  20255054 agtttgttgacccagttcggtgacaaacacatgtactatgggggctaccaagctaggaaggaaatccactagtgtggtccttattctaaagttctcagca 20254955  T
Q  173 aactcctcgttt 184  Q
    ||||||||||||    
T  20254954 aactcctcgttt 20254943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 24384582 - 24384687
Alignment:
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | || ||| ||||||||||  |||| | ||| | |||||||| |||    
T  24384582 tactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctagggcct 24384680  T
Q  205 acccgta 211  Q
    |||||||    
T  24384681 acccgta 24384687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 12240228 - 12240306
Alignment:
Q  76 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccg 153  Q
    |||||||||||||||||||| |||   ||||||||| || ||||||||| ||||||||||||||| |||||||||||||    
T  12240228 tttgttaacccagttcggtgacaaacacacctactccggaggctaccaaaccaggaaggaaatccgctagtgtagtccg 12240306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 24482308 - 24482376
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||| || ||||||||| |||||    
T  24482308 tttgttaacccagtttggtgcaacgtcacctacatctgggggctaacaagtcaagaaggaaattcacta 24482376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 32179295 - 32179365
Alignment:
Q  74 agtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||| |||  |||||| |||| |||||    
T  32179295 agtttgttaacccagttcggtgcaacttcacctacgtctggaggctacaaagttaggaagaaaattcacta 32179365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 12240365 - 12240413
Alignment:
Q  216 cgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||| |||| |||||||||||  |||||||||||||||||    
T  12240365 cgtactgacttcagcctaggaactcctagacctgagatctcatctcact 12240413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 23249863 - 23249906
Alignment:
Q  221 tgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  23249863 tgacttcaacctaggaactcctagatctgagatcccatctcact 23249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 18753875 - 18753951
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||||||||||||| || |||   ||||||||||  |||||| ||||||| ||||||||| || |||||||||||    
T  18753875 ttgttaacccagttcgatgacaaatacacctactctaagggctatcaagccaagaaggaaatacagtagtgtagtcc 18753951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 228; Significance: 1e-125; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 16137825 - 16137462
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  16137825 tgaatgaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaagtaaaaggcacaatgagtttgttaacccagtttgatgcaacg 16137726  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  16137725 tcacctactctgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcagtaatgacctagg 16137626  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 300  Q
    | ||||||||        ||||||||||||||| |||||| || || ||||||| |||||||||||||||||||| |||||| ||| | |||||||||||    
T  16137625 atctacccgt--------actgacttcaacctaggaactcataaatctgagatcacatctcactcccttacaacttatcacaacccctatgattctcaaa 16137534  T
Q  301 ttgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || |||||||||| ||||||||||||||||||  |||||||||||||| ||||||||| | |||||||||||    
T  16137533 ttacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtactttacagcttaggtgc 16137462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 19215869 - 19216231
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacg 100  Q
    ||||||||||||||||||||| |||||||||||| |||||| |||||||| ||  ||||||||| ||||| |||||||||||||||||||||||||||||    
T  19215869 tgaataaaatgtttcgaacactaagctaacacaagacaagagaaatgcaacgcgaaaagtaaaaggcacattgagtttgttaacccagttcggtgcaacg 19215968  T
Q  101 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctag 199  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  19215969 tcacctactct-agggataccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgttttcactatatgacctag 19216067  T
Q  200 gacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaa 299  Q
    |||||||        ||||||| |||||||| || |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  19216068 gacctac--------ccgtactaacttcaacttaggaactcctagatttgagatcccatctcactcccttacaactgatcacagcccttgtgatactcaa 19216159  T
Q  300 attgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || | ||| |||||  |||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  19216160 atagaaaatacaatcaaaatgaagttaccttcaaacaaaacaactaaacaccatacttcacagcttaggtgc 19216231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 15038261 - 15038624
Alignment:
Q  1 tgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaat--gcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaa 98  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||   ||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  15038261 tgaataaaatgtttcgaacactaagctaacacaagacaagaaaaaaaagcaaagcacgaagtaaaagacacagtgagtttgttaacccagtttggtgcaa 15038360  T
Q  99 cgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgaccta 198  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||    
T  15038361 cgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcaggaaactcctcgtttgcacaaatgaccta 15038460  T
Q  199 ggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctca 298  Q
    ||||| ||        |||||||||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||| | |||| ||||    
T  15038461 ggaccaac--------ccgtactgacttcaacctagtaactcctagatctgagatcccatctcactccattacaactgatcatagcccctatgatactca 15038552  T
Q  299 aattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 370  Q
    || | |||| |||||  |||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||    
T  15038553 aa-tacaaatacaatcaaaatgaagttaccttcaaacaatacaactgaataccgtacttcacagctttggtgc 15038624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 66 - 358
Target Start/End: Original strand, 9384594 - 9384879
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  9384594 gcacagtgagtttgttaacccagttcggtacaacgtcgcctattctggtggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 9384693  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||||||||| ||||||||||||||||        ||||||||||||||||||| ||||| || ||| ||||||| |||||||||    
T  9384694 ctcagcaaactcctcgtttgcactatatgacctaggacctac--------ccgtactgacttcaacctaggaact-cttgatctgagatcccatctcact 9384784  T
Q  265 cccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttacctt-caaacaaaacaactaaataccgtacttca 358  Q
    |||| |||| |||||||| ||| ||||||||||||  | |||||||||| |||||||||||||||  ||| |||||||||||| ||||| |||||    
T  9384785 ccctaacaaatgatcacaacccctgtgattctcaatatacaaacacaatcaaatgaagttaccttaaaaaaaaaacaactaaacaccgtgcttca 9384879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 66 - 358
Target Start/End: Complemental strand, 15003341 - 15003055
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  15003341 gcacagtgagttcgttaacccagttcggtgcaatgtcacctactctggtggataccaagccatgaaggaaatccactagtgtagtccttattcaatagct 15003242  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || ||||||||||| |||||||||| ||||||||||||||||        |||||||||||||||| || |||||||||||| |||||||||||||||||    
T  15003241 ctcagcaaactccttgtttgcactatatgacctaggacctac--------ccgtactgacttcaacataggaactcctagatttgagatctcatctcact 15003150  T
Q  265 cccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaaca-aaacaactaaataccgtacttca 358  Q
    ||||||||| ||||||| |||  | ||||||| || || || ||||||| |||| |||||||||||||||| ||||||||||  ||||| |||||    
T  15003149 cccttacaaatgatcactgcctctatgattctgaatttacagacacaatcaaataaagttaccttcaaacacaaacaactaatcaccgtgcttca 15003055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 73 - 369
Target Start/End: Complemental strand, 12444891 - 12444604
Alignment:
Q  73 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 171  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||    
T  12444891 gagtttgttaacccagttcggtgacaaca-cacctactctggaggctaccaagctaggaaggaactccactagtgtagtccgtattcaaaagctctcagc 12444793  T
Q  172 aaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttac 271  Q
    |||  || |||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||| ||||||| || |||||||||||||    
T  12444792 aaa--ccacgtttgcactaatgacctaggacctac--------ccgtactgacttcaacctaggaactcctagatttgagatcccacctcactcccttac 12444703  T
Q  272 aactgatcacagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtg 369  Q
    ||||||||||| ||| |||||| |||||||  |||| |||||  ||||||| |||||||||||||| |||||| || ||||||||||| ||||| ||||    
T  12444702 aactgatcacaacccctgtgatactcaaataacaaatacaatcaaaatgaatttaccttcaaacaacacaactgaacaccgtacttcacagctttggtg 12444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 66 - 302
Target Start/End: Original strand, 20003117 - 20003346
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  20003117 gcacaatgagtttgtgaacccagttcggtgcaacgtcacctactttaggggctaccaagccaggaaggaaatcaactagtgtagttcttattcaatagct 20003216  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || || |||| |||||||||||||| ||||||||||||||||        ||||||| ||||||||||| |||||||||||| ||||||| |||||||||    
T  20003217 ctcaggaaacccctcgtttgcactatatgacctaggacctac--------ccgtacttacttcaacctaggaactcctagatttgagatcccatctcact 20003308  T
Q  265 cccttacaactgatcacagcccgtgtgattctcaaatt 302  Q
    |||||||||||||||||| ||  |||||||||||||||    
T  20003309 cccttacaactgatcacatcctctgtgattctcaaatt 20003346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 56 - 268
Target Start/End: Complemental strand, 16309545 - 16309342
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    ||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||    
T  16309545 aaagtaaaaggcacaggaagtttgttaacccagttcagtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtatagtcctta 16309447  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    |||  ||||||| |||||||||||||||| |||||| |||||||||||||||||| ||       ||||||||||||| |||||| ||||| ||||||||    
T  16309446 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt-ct-------tgacttcaacctaggaactcgtagatctgagatct 16309355  T
Q  256 catctcactccct 268  Q
    |||||||||||||    
T  16309354 catctcactccct 16309342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 20558283 - 20558473
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| | | |||    
T  20558283 cacagtgagtttgttaacccagttcggtgcaacgtcacctagtctggaggctaccaagccaggaaggaaatccactagtgtagcccttattctaaaactc 20558382  T
Q  167 ttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    | |||||||||||||||| ||| | |||||||||||||||||||| ||        |||||||||||| ||||||||||||||||||||||||||||||    
T  20558383 tcagcaaactcctcgtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaagaactcctagatatgagatctcatctcact 20558473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 15007524 - 15007370
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||| | ||    
T  15007524 aaagaaaaaggcacagtgagtttgttaacccagttcgatgcaaagtcacctactctgggga-taccaagccatgaaggaaatccactagtgtagtactta 15007426  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 210  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  15007425 ttcaatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgt 15007370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 72 - 264
Target Start/End: Original strand, 17855180 - 17855366
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| |||||| |||||| |||   |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  17855180 tgagtttgttgacccagatcggtgacaaacacacctactctggaggctatcaagccaggaaggaaatccactagtgtagtccttattcaatagctctcag 17855279  T
Q  171 caaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| |||||||||||||||||    
T  17855280 caaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatctcatctcact 17855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 20470376 - 20470191
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| ||||||||||| | |||   |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||    
T  20470376 tgagtttgttgacccagttcggcgacaatcacacctactctggaggctaccaagccaggaaggaaatccactagtgtactccttattctatagctctcag 20470277  T
Q  171 caaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||| |||||| |||||||||||||||||||      ||  |||||||||||| |||||||||||| |||||||||||||||||    
T  20470276 caaactcctcgtttacactaaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatctcatctcact 20470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 33665774 - 33665965
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||| ||||||||| |||   ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  33665774 cacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaggaaggaaatccactagtgtagtccttattcaatagct 33665873  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| ||||| |||||||||||||||      ||  |||||||||| | |||||||||||| |||||||||||||||||    
T  33665874 ctcagcaaactcctcgtttacactatatgacataggacctacccgta------ta--gacttcaaccaaggaactcctagatctgagatctcatctcact 33665965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 102 - 264
Target Start/End: Complemental strand, 9281851 - 9281696
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||| |    
T  9281851 cacctactctgggggctaccaagcctggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaag 9281752  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  9281751 acctacccgta------ta--gacttcaacctaggaactcctagatttgagatcccatctcact 9281696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 34657329 - 34657184
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||| |||||||||||||||||||||  |||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  34657329 cacagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 34657231  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    || |||||||||||||||| ||||| ||||||||||||| |||||||    
T  34657230 ctcagcaaactcctcgtttacactatatgacctaggaccaacccgta 34657184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 102 - 264
Target Start/End: Original strand, 13195340 - 13195495
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 200  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||| ||||||||||    
T  13195340 cacctactctaggggctaccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagaaaactcctcgtttacactatatgacctagg 13195439  T
Q  201 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  13195440 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 13195495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 15897847 - 15897710
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  15897847 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattctatagctcttag 15897748  T
Q  171 caaactcctcgtttgcactaatgacctaggacctaccc 208  Q
    |||||||||| ||| || ||| ||||||||||||||||    
T  15897747 caaactcctcatttacaataacgacctaggacctaccc 15897710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 24501812 - 24501950
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    |||||||||||||||||||||| |||   |||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||    
T  24501812 agtttgttaacccagttcggtgacaaacacacctactctagaggctaccaagccagaaaggaaatccactagtgtagtccttattctatagctctcagca 24501911  T
Q  173 aactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||||||| ||| |||||| |||||||||||||||||||    
T  24501912 aactcctcatttacactaaagacctaggacctacccgta 24501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 102 - 264
Target Start/End: Original strand, 25805470 - 25805624
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||| |||||| |||||||||    
T  25805470 cacctactctagaggctaccaagccaggaaggaaatccactagtgtagtccttattatatagctctcagcaaactcctcgtttacactaaagacctagga 25805569  T
Q  202 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||        ||||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  25805570 cctac--------ccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 25805624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 56 - 264
Target Start/End: Original strand, 28623499 - 28623699
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| ||| || |||||||||||||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||  ||||||||||||| |    
T  28623499 aaagtaaaaggcagagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaataaactagtgtagtcctt 28623597  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| | |||||| |||||| || |||||| |||| | ||||||||||||||        ||||| ||| ||||||||| |||||||||||| |||||||    
T  28623598 attctaaagctctgagcaaaatcttcgtttacacttaagacctaggacctac--------ccgtattgatttcaacctaggaactcctagatttgagatc 28623689  T
Q  255 tcatctcact 264  Q
    ||||||||||    
T  28623690 tcatctcact 28623699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 294
Target Start/End: Complemental strand, 23882872 - 23882652
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||    
T  23882872 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaaatcaggaaggaaatccactagtgtagtctttattctatagct 23882773  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    |  ||||||||| | |||| |||||| ||||||||||||||        | ||| ||| |||||||||||||||||||||| ||| |||||||||||||     
T  23882772 cccagcaaactctttgtttacactaaagacctaggacctac--------ctgtattgatttcaacctatgaactcctagatctgatatctcatctcacta 23882681  T
Q  266 ccttacaactgatcacagcccgtgtgatt 294  Q
     ||||||    |||||||||| |||||||    
T  23882680 tcttacagtcaatcacagcccctgtgatt 23882652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 71 - 264
Target Start/End: Complemental strand, 29255089 - 29254904
Alignment:
Q  71 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    ||||||||||| ||||||||| ||| |||   |||||||||| ||| ||| |||||||||||| ||||||||||||||||||| ||||| |||||||| |    
T  29255089 gtgagtttgttgacccagttcagtggcaaacacacctactctaggg-ctatcaagccaggaagaaaatccactagtgtagtccttattctatagctctca 29254991  T
Q  170 gcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||||| |||||| |||||||||||||||        |||| ||| |||||| ||||||||||||||| ||||||| |||||||||    
T  29254990 gcaaactcctcgtttacactaaagacctaggacctacc--------cgtattgatttcaacttatgaactcctagatctgagatcccatctcact 29254904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 17864603 - 17864413
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||||| |||||||| ||| ||||||||| |||   ||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  17864603 cacagtaagtttgttgacctagttcggtgacaaacacacctactctgggggttaccaatccaggaagaaaatccactagtgtagtccttattctatagct 17864504  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| |||||| |  |||||||||||| |||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  17864503 ctcagcaaactcctcgtttacactaaagtactaggacctacctgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 17864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 21723543 - 21723442
Alignment:
Q  109 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacc 207  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  21723543 tctgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 21723445  T
Q  208 cgt 210  Q
    |||    
T  21723444 cgt 21723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 14258891 - 14259082
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| |||||||||||||  ||   |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  14258891 cacaatgagtttgttgacccagttcggtgagaaacacacctactttgggggctaccaagcgaggaaggaaatccactagtgtagtccttattcaatagct 14258990  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || | ||||||  |||||| || || |||||||||||||||||||||      ||  |||||| || ||||||||||||||| ||||||| |||||||||    
T  14258991 ctcaacaaacttatcgtttacaatatatgacctaggacctacccgta------ta--gacttccacttatgaactcctagatctgagatcccatctcact 14259082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 20989943 - 20989802
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| ||    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||||    
T  20989943 cacaatgagtttgttgacccagttcggtgacagacacacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagct 20989844  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacc 207  Q
    || |||||||||||||||| || ||| |||||| ||||||||    
T  20989843 ctcagcaaactcctcgtttacattaaagacctatgacctacc 20989802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 32449271 - 32449379
Alignment:
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 205  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  32449271 tactctaggggctaccaaaccaggaaggaaatccattagtgtattccttatttaatagttctcagcaaactcctcgtttgcactaatgtcctaggaccta 32449370  T
Q  206 cccgtactg 214  Q
    |||||||||    
T  32449371 cccgtactg 32449379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 17528063 - 17527920
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||||||||||||| ||| |||   |||||||| | |||||||||||||||| |||  |||||||||||||||||| |||||||||| |    
T  17528063 cacagtgagtttgttaacccagttcagtgacaaacacacctactattggggctaccaagccagaaagttaatccactagtgtagtccttattcaatagtt 17527964  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctaccc 208  Q
    || ||||||||||| |||| ||||| ||||||||||||||||||    
T  17527963 ctcagcaaactccttgtttacactatatgacctaggacctaccc 17527920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 56 - 335
Target Start/End: Complemental strand, 26965760 - 26965488
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||| |||||   |||||||| ||||||||||||| |||   |||||||||||| ||||| |||| ||||||||||||||||||||||||||| |    
T  26965760 aaagtaaaaggcacaaacagtttgttgacccagttcggtgacaaacacacctactctggaggctatcaagtcaggaaggaaatccactagtgtagtcctt 26965661  T
Q  155 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
    |||| | || ||| |||||||||||| ||| | ||| | |||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||    
T  26965660 attctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagat 26965569  T
Q  254 ctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaaca 335  Q
    | |||||||||  | |||||   |||||| ||| ||||||| |||||||  ||||||||    ||||||| |||||||||||    
T  26965568 cccatctcactatcctacaatcaatcacaacccctgtgattatcaaatt-taaacacaaaatgatgaagtgaccttcaaaca 26965488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 21706528 - 21706383
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 164  Q
    |||| ||||||||||||||||||| |||| |||   ||||||| || ||||||| || ||| |||||| ||||||||||||||||||| |||||||||||    
T  21706528 cacaatgagtttgttaacccagtttggtgacaaacacacctacgtccgggggct-cctagctaggaagaaaatccactagtgtagtccttattcaatagc 21706430  T
Q  165 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 210  Q
    ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  21706429 tctcagcaaactcctcgtttacactatatgacctaggacctacccgt 21706383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 25964722 - 25964866
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25964722 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25964821  T
Q  212 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
          ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  25964822 ------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 25964866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 25969369 - 25969513
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25969369 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25969468  T
Q  212 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
          ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  25969469 ------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 25969513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 25973809 - 25973953
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 211  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25973809 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25973908  T
Q  212 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
          ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  25973909 ------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 25973953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 12039824 - 12039715
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 201  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||||| ||||| |||||||| | |||||||||||||| |||||| |||||||||    
T  12039824 cacctactttgggggctaccaagctaggaaggaaatcttctagtgtagtccttattctatagctctcaacaaactcctcgtttacactaaagacctagga 12039725  T
Q  202 cctacccgta 211  Q
    ||||| ||||    
T  12039724 cctactcgta 12039715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 67 - 260
Target Start/End: Original strand, 17234572 - 17234759
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| |||||||| |||| |||   |||||||||| ||||||||||||||  ||||||||||||| |||||||||| ||||||||||||    
T  17234572 cacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagcccagaaggaaatccaccagtgtagtccttattcaatagct 17234671  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatct 260  Q
    ||  |||||||||  |||| ||||| |||||||| ||||||||||||      ||  |||||||||||| |||||||||||| ||| |||||||||    
T  17234672 ctctgcaaactccctgtttacactatatgacctatgacctacccgta------ta--gacttcaacctaggaactcctagatctgatatctcatct 17234759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 25782793 - 25782893
Alignment:
Q  68 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    |||||||||||||||||||||||||||| |||   |||||||||||| |||||||||||||| |||||||||||||||||||| |  ||||| |||||||    
T  25782793 acagtgagtttgttaacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagtgtagccattattctatagctc 25782892  T
Q  167 t 167  Q
    |    
T  25782893 t 25782893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 61 - 344
Target Start/End: Complemental strand, 21323457 - 21323181
Alignment:
Q  61 aaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 159  Q
    |||| |||||| ||||||||||||||| |||||  |||| |||||||| | |||||||||||||  ||||||||||||||||||||||||||| |||||     
T  21323457 aaaaggcacagagagtttgttaacccaattcggcacaac-tcacctacatttgggggctaccaaatcaggaaggaaatccactagtgtagtccttattct 21323359  T
Q  160 atagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcat 258  Q
    | || | | | |||||||||| ||| | |||   || |||||| |||         ||||| ||||||||||||| |||||||||||| |||||||||||    
T  21323358 a-agttatcaacaaactcctcatttacaactctagaactaggatcta--------accgtattgacttcaacctaggaactcctagatctgagatctcat 21323268  T
Q  259 ctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaa--atgaagttaccttcaaacaaaacaacta 344  Q
    |||||| || | |||   | |||| ||| ||||||| ||| ||| |||||||||  ||  ||||||||||||||||||||||||||||    
T  21323267 ctcacttccct-caatgaaccacaacccatgtgattatcagattacaaacacaacaaaagatgaagttaccttcaaacaaaacaacta 21323181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 13870493 - 13870399
Alignment:
Q  117 ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 210  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||| | |||| ||||| |||||| |||||||||||||    
T  13870493 ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcatcaagctcattgtttacactatatgaccgaggacctacccgt 13870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 19171452 - 19171587
Alignment:
Q  122 aagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtac 220  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||| | ||  |||| |||||||||||||||||||||      ||     
T  19171452 aagctaggaaggaaatccactagtgtagtccttattcaataactctcagcaaagtccttgcttatactatatgacctaggacctacccgta------ta- 19171544  T
Q  221 tgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
     ||||||||||||||||||||||||| ||||||  |||||||||    
T  19171545 -gacttcaacctatgaactcctagatctgagattccatctcact 19171587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 285
Target Start/End: Complemental strand, 3567592 - 3567389
Alignment:
Q  73 gagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 171  Q
    |||||||||||| ||||||||  |||| |||||||| ||||||| ||||||||  ||||| | |||||||||||||||| | ||||| | |||||| |||    
T  3567592 gagtttgttaactcagttcggcacaac-tcacctacatctgggg-ctaccaagttaggaaagtaatccactagtgtagttcttattctaaagctctcagc 3567495  T
Q  172 aaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttac 271  Q
    ||| ||||||||| |||| | |||||||||||||||        |||| ||| ||||||||| ||||| |||||| | |||||||||||||||  | |||    
T  3567494 aaaatcctcgtttacacttaagacctaggacctacc--------cgtattgatttcaacctaagaacttctagatctaagatctcatctcactatcctac 3567403  T
Q  272 aactgatcacagcc 285  Q
    |||  |||||||||    
T  3567402 aaccaatcacagcc 3567389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 358
Target Start/End: Original strand, 32452131 - 32452252
Alignment:
Q  236 aactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttacc-ttcaaac 334  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||  || | ||||||||| ||| || ||||||| ||||||||||||| || ||||    
T  32452131 aactcctagatctgagatcccatctcactcccttacaaatgatcaca--ccctatgattctcagattacagacacaatcaaatgaagttacctttaaaac 32452228  T
Q  335 aaaacaactaaataccgtacttca 358  Q
    ||||||||||   |||||||||||    
T  32452229 aaaacaactattcaccgtacttca 32452252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 8465846 - 8465705
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||| ||||||| |||   ||||||||||||||||| ||||||||||||     ||| |||||||||||| || || ||||||    
T  8465846 cacaatgagtttgttgacccatttcggtgacaaacacacctactctgggggctgccaagccaggaat----tccgctagtgtagtccttactctatagct 8465751  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    || ||||||||||   ||| |||||| |||||||||||||||||||    
T  8465750 ctcagcaaactccaaatttacactaaagacctaggacctacccgta 8465705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 22885305 - 22885237
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  22885305 tttgttaacccagtacggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatctacta 22885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 264
Target Start/End: Complemental strand, 20765160 - 20764982
Alignment:
Q  79 gttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactc 177  Q
    ||||||||||||||||| |||   ||| |||||||||||| |||||||||||||| || |||||||||||||||| ||||| | || ||| | ||||||     
T  20765160 gttaacccagttcggtgacaaacacacttactctgggggcgaccaagccaggaagaaagtccactagtgtagtccttattcta-agttctcaacaaactt 20765062  T
Q  178 ctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
      ||||| | |||   |||||||||||||||||| ||       ||||||||||||| |||||| ||||| |||||||||||||||||    
T  20765061 tccgtttacaactctagacctaggacctacccgt-ct-------tgacttcaacctaagaactcttagatctgagatctcatctcact 20764982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 3904834 - 3904767
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| ||||||||| |||||| |||||  | |||||||||||||||||||||||||| ||||    
T  3904834 tttgttaacctagttcggtgaaacgtcccctacgtttggggctaccaagccaggaaggaaatcaacta 3904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 18152739 - 18152694
Alignment:
Q  219 actgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  18152739 actgacttcaacctaggaactcctagatctgagatctcatctcact 18152694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 30424905 - 30424998
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 148  Q
    |||||||||| |||||  || ||||| | ||||||||||| |||   |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  30424905 aaagtaaaatacacaggaagattgttgaaccagttcggtgacaaacacacctactctaggggctaccaagccaagaaggaaatccattagtgta 30424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 18152874 - 18152798
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    ||||||||||||||| ||| |||   |||||||| ||| |||||||||| ||||||||||||||||||| |||||||    
T  18152874 ttgttaacccagttcagtgacaaacacacctactatggaggctaccaaggcaggaaggaaatccactagcgtagtcc 18152798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 22903263 - 22903195
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||| |||||||||||||||||| ||||||| |  ||||||||||||| ||||| ||||    
T  22903263 tttgttaacccagtgcggtgcaacgtcacctacatctggggacatccaagccaggaagaaaatctacta 22903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 11960511 - 11960608
Alignment:
Q  115 ggctaccaagccaggaaggaaatccactagtgtagtc-cgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 210  Q
    ||||||||||||| |||||||||| | ||||||||||   ||||| | || ||| |||||||||||||||| | ||| | ||||||||||||||||||    
T  11960511 ggctaccaagccacgaaggaaatctattagtgtagtcttttattctaaagttctcagcaaactcctcgtttacaactgaagacctaggacctacccgt 11960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 12464156 - 12464225
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| |||||||||||||| |||||||| | |||| |||||| || |||||||||||| |||||    
T  12464156 gtttgttaactcagttcggtgcaacttcacctacatgtgggagctaccgagtcaggaaggaaattcacta 12464225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 1103474 - 1103411
Alignment:
Q  80 ttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||| |||||| ||||    
T  1103474 ttaacccagttcggtgcaacgccacttacgtctgggg-ctaccaagccaggaaagaaatctacta 1103411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 3357165 - 3357097
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||| || ||||||| ||||||||  ||| ||||||||||||||| ||||||||| |||||    
T  3357165 tttgttaacccaattaggtgcaatgtcacctatatctaggggctaccaagccaagaaggaaattcacta 3357097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 13553349 - 13553409
Alignment:
Q  84 cccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||| |||||||| |||||||| | |||||||||||| |||||||||||||| |||||    
T  13553349 cccagttgggtgcaacatcacctacgtttgggggctaccatgccaggaaggaaattcacta 13553409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 369
Target Start/End: Complemental strand, 15004272 - 15004177
Alignment:
Q  275 tgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaaca-aaacaactaaataccgtacttcagagcttaggtg 369  Q
    |||||||||||  | ||||||| || || || ||||||| ||||||| ||||||||||||| ||||||||||  ||||| ||||| ||||| ||||    
T  15004272 tgatcacagcctctatgattctgaatttacagacacaatcaaatgaatttaccttcaaacacaaacaactaatcaccgtgcttcacagctttggtg 15004177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 22918108 - 22918045
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatc 138  Q
    ||||||||||||||  ||||||||||||||||| |||| || |  |||||||||||||||||||    
T  22918108 tttgttaacccagtatggtgcaacgtcacctacatctgaggacatccaagccaggaaggaaatc 22918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 19894722 - 19894656
Alignment:
Q  143 agtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctaccc 208  Q
    |||||||||| |||||||||||||| | |||| |||| |||| || || ||||||||||||||||||    
T  19894722 agtgtagtccttattcaatagctctcatcaaattccttgtttacattatatgacctaggacctaccc 19894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 16176583 - 16176644
Alignment:
Q  75 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaa 135  Q
    ||||||||||||||||  |||| || |||||||| ||||  |||||||||||||||||||||    
T  16176583 gtttgttaacccagtttagtgcgacttcacctacgtctgcaggctaccaagccaggaaggaa 16176644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 28045092 - 28045031
Alignment:
Q  83 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||||  |||||||| | |||||||||||||| ||| || |||||||||||    
T  28045092 acccagttcggtgcaatttcacctacatatgggggctaccaaggcagaaatgaaatccacta 28045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 14448651 - 14448583
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| |||||||||||||||||| ||  |||  |||||| ||||||  |||||||||||||||    
T  14448651 tttgttaacctagttcggtgcaacgtcacttagatcttagggctatcaagcctagaaggaaatccacta 14448583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 1e-94; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 66 - 369
Target Start/End: Original strand, 29565993 - 29566288
Alignment:
Q  66 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29565993 gcacagtgagtttgttaactcagttcgatgcaacgtcccctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 29566091  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 265  Q
    || ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||||| ||||||| ||||||||||    
T  29566092 ctcagcaaactcctcgtttgcactaatgacctaggacctac--------ccgtactgacttcaacctagaaactcctagatctgagatcccatctcactc 29566183  T
Q  266 ccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtacttcagagctt 364  Q
    |||||||| |||||||||||| ||||||| |||| || || ||||||| |||||||||||||||| |||||||||||||||  ||||| ||||| |||||    
T  29566184 ccttacaaatgatcacagcccctgtgattttcaatttacagacacaatcaaatgaagttaccttcaaaacaaaacaactaacaaccgtgcttcacagctt 29566283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 69 - 370
Target Start/End: Original strand, 18765659 - 18765954
Alignment:
Q  69 cagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  18765659 cagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctc 18765758  T
Q  169 agcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccc 267  Q
    || ||||||||||||||||||| |||||||||||| |||        ||||||| ||||||||||| |||||| ||||| ||||||| ||||||| |||     
T  18765759 agtaaactcctcgtttgcactatatgacctaggacttac--------ccgtactaacttcaacctaggaactcgtagatctgagatcccatctcattcca 18765850  T
Q  268 ttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtacttcagagcttag 366  Q
    |||||||| |||||||||| ||||||| ||||||| |||| | ||| |||||||||||||||| |||| ||||||||||| ||||||||||  ||||| |    
T  18765851 ttacaactaatcacagcccatgtgattttcaaattacaaaaataattaaatgaagttaccttcaaaactaaacaactaaacaccgtacttctcagctttg 18765950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 70 - 345
Target Start/End: Complemental strand, 13315141 - 13314872
Alignment:
Q  70 agtgagtttgttaacccagttcggtgcaacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 168  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||| ||||||||||||||||||| ||||||| ||||||     
T  13315141 agtgagtttgttaacccagttcggtgcaatgtcacctactatggggggctactaagccaggaagaaaatccactagtgtagtccttattcaagagctctc 13315042  T
Q  169 agcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| | | |||||||||||| ||||||| |||||||||||||    
T  13315041 agcaaactcctcgtttgcactaatgacctaggacctacccgt--------actgacttcaatcaaggaactcctagatctgagatcccatctcactccct 13314950  T
Q  269 tacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaa 345  Q
    | ||| |||||||||||| |||||||||||  || || ||||||| |||||||||||||||| |||||||||||||||    
T  13314949 tccaaatgatcacagcccatgtgattctcagtttacagacacaatcaaatgaagttaccttcaaaacaaaacaactaa 13314872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 23758606 - 23758797
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  23758606 cacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagtt 23758705  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || | |||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  23758706 ctcaacaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 23758797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 36398968 - 36398782
Alignment:
Q  72 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 170  Q
    |||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||    
T  36398968 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcag 36398869  T
Q  171 caaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||||||||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  36398868 caaactcctcgtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 36398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 26860432 - 26860284
Alignment:
Q  109 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  26860432 tctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 26860333  T
Q  208 cgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||      ||  || ||||||||| |||||||||||| |||||||||||||||||    
T  26860332 cgta------ta--gatttcaacctaggaactcctagatctgagatctcatctcact 26860284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 12910470 - 12910661
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  12910470 cacagtgagtttgttgacccagttcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccacaagtgtagtccttattcaatagct 12910569  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
     | ||||||||| |||||| ||||| ||| |||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  12910570 ttcagcaaactcgtcgtttacactatatggcctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 12910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 24790337 - 24790146
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||    
T  24790337 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagagtagtccttattcaatatct 24790238  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  24790237 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 24790146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 56 - 211
Target Start/End: Complemental strand, 19466712 - 19466556
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||  |||| |||||||| ||||||||||||||||  ||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19466712 aaagtaaatggcacggtgagtttcttaacccagttcggtgataaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 19466613  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    |||| |||||||| || ||||||||| ||| |||||| |||||||||||||||||||    
T  19466612 attctatagctctcagaaaactcctcatttacactaaagacctaggacctacccgta 19466556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 15328299 - 15328412
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||| |||||||    
T  15328299 tttgttaacccagttcggtgcaatgttacctactctgggggctaccaagccaagaaggaaatccattagtgtagtccttattcaaaagctctaagcaaac 15328398  T
Q  176 tcctcgtttgcact 189  Q
    ||||| ||| ||||    
T  15328399 tcctcatttacact 15328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 22610873 - 22611064
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   |||||||    ||||  ||||||  |||||||||||||||||||||||||| ||||||||||||    
T  22610873 cacaatgagtttgttgacccagttcggtgacaaacacacctacaaaaggggaaaccaagaaaggaaggaaatccactagtgtagtccttattcaatagct 22610972  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  22610973 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 22611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 56 - 262
Target Start/End: Complemental strand, 20649746 - 20649547
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  ||||||  ||||||||||||||||||| | |||   |||||||||| |||||||| ||| ||||||||||||||||||||||||||| |    
T  20649746 aaagtaaaagccacagttggtttgttaacccagttcggggacaaacacacctactctaggggctacaaagtcaggaaggaaatccactagtgtagtcctt 20649647  T
Q  155 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
     ||| | || ||||||||||||||  |||| | ||| || |||||||||||||        |||||||| |||||||||| |||||||||||| ||||||    
T  20649646 gttcta-agttcttagcaaactccaagtttacaacttatcacctaggacctac--------ccgtactggcttcaacctaggaactcctagatttgagat 20649556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 21530404 - 21530507
Alignment:
Q  104 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 203  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| | ||||| |||||||| |||||| ||||||||| | |||| |||||||||||    
T  21530404 cctactctaggggctaccaagccaagaaggaaatccactagtgtagttcttattctatagctctcagcaaattcctcgtttacgctaaagacctaggacc 21530503  T
Q  204 tacc 207  Q
    ||||    
T  21530504 tacc 21530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 335
Target Start/End: Complemental strand, 21250387 - 21250116
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaaccc-agttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccg 153  Q
    ||||||||| |||||||||||||||| |||| ||||||||| |||   |||||||||||||||||||||||| |||||||||||||  ||||||||||      
T  21250387 aaagtaaaaggcacagtgagtttgttgaccccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccgttagtgtagtcgt 21250288  T
Q  154 tattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgaga 252  Q
    ||||  | || ||| || |||  || ||||| | ||| | |||||||||||||||||| ||        |||||||||||| || ||||||||| |||||    
T  21250287 tattttaaagttctcagtaaa--ccacgtttacaacttaagacctaggacctacccgt-ct-------agacttcaacctaggatctcctagatctgaga 21250198  T
Q  253 tctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaaca 335  Q
    ||||||||||||  | |||||   |||||||||| ||||||| ||| |||  ||||||||   ||||||||||||||||||||    
T  21250197 tctcatctcactatcctacaatcaatcacagcccctgtgattatcatatt-taaacacaaaataatgaagttaccttcaaaca 21250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 25347210 - 25347321
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 200  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| | || ||||||||||||||  |||| | ||| | || |||||    
T  25347210 cacctactctgggggctaccaagccagaaaggaaacccactagtgtagtccttattcta-agttcttagcaaactccaagtttacaacttaagaactagg 25347308  T
Q  201 acctacccgtact 213  Q
    |||||||||||||    
T  25347309 acctacccgtact 25347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 264
Target Start/End: Original strand, 27111071 - 27111250
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 175  Q
    |||||||||||| |||||| |||   |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| | || ||| |||||||    
T  27111071 ttgttaacccagatcggtgacaaacacacctactctgggg-ctaccaagccaggaaggaagtccactagtgtagtccttattcta-agttctcagcaaac 27111168  T
Q  176 tcctcgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    | |  |||| | ||| | || |||||||||||        ||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  27111169 ttcaagtttacaacttaagaactaggacctac--------ccgtacttacttcaacctaggaactcctagatctgagatctcatctcact 27111250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 24317981 - 24317871
Alignment:
Q  75 gtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    ||||||||||||| ||||||| |||   ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| | || ||| ||||    
T  24317981 gtttgttaacccaattcggtgacaaacacacctacatctgggggttaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagca 24317883  T
Q  173 aactcctcgttt 184  Q
    ||||||| ||||    
T  24317882 aactcctggttt 24317871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 31587467 - 31587548
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    ||||||||||||||||||| |||   |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  31587467 ttgttaacccagttcggtgacaaacacacctactctggag-ctaccaagccaggaaggaaatccactagtgtagtccttattc 31587548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 12952462 - 12952539
Alignment:
Q  76 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||||||||||||||||| |||   |||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  12952462 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagtcaggaaggaaatccactagtgtagtcc 12952539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 31067654 - 31067586
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  31067654 tttgttaacctagtttggtgcaacgtcacctacgtctgggggctaccaattcaggaaggaaatccacta 31067586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 17395546 - 17395614
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||| |||||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||    
T  17395546 tttgtttacccagttcggtgcaacgtcgcctaagtgtgggggctatcaagccaggaaggaaatccacta 17395614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 19198420 - 19198371
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  19198420 cacctactctgggg-ctatcaagccaggaaggaaatccactagtgtagtcc 19198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 24283671 - 24283621
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  24283671 cacctattctgggggctaccaagtcaggaaggaaatctactagtgtagtcc 24283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 27107632 - 27107681
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  27107632 ccgtactgacttcaacctaggaactcctagatttgagatctcgtctcact 27107681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 17363507 - 17363575
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||||| ||||| |||||    
T  17363507 tttgttgacccagttcggtgcaacctcacctacatctgggggttaccaagtcaggaatgaaattcacta 17363575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 45550031 - 45550098
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||| |||||||||||| |||||||||||    
T  45550031 tttgttaaccaagttcggtgcaacatcacctacatctaggggct-ccaagccaggaacgaaatccacta 45550098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 211
Target Start/End: Complemental strand, 24317380 - 24317222
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctggggg-ctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    ||||||||| ||||| |  |||||||||| |||||||||| |||   ||||||| |||||||| ||||||||  |  |||||||||||||||||||||||    
T  24317380 aaagtaaaaggcacaattggtttgttaactcagttcggtgacaaacacacctacatctggggggctaccaagttataaaggaaatccactagtgtagtcc 24317281  T
Q  153 gtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgta 211  Q
     ||||| | || ||| | |||||||||||||| | |||   |||||||||||||||||||    
T  24317280 ttattcta-agttctcaacaaactcctcgtttacaactctagacctaggacctacccgta 24317222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 25867173 - 25867227
Alignment:
Q  87 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatcca 140  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  25867173 agtttggtgcaacgtcacctacatctggaggctaccaggccaggaaggaaatcca 25867227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 20378387 - 20378326
Alignment:
Q  83 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||| |||||||||||| |||||||| |||||| ||||||||||||||||| |||| |||||    
T  20378387 acccggttcggtgcaacttcacctacatctgggagctaccaagccaggaagaaaatgcacta 20378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 264
Target Start/End: Complemental strand, 20475409 - 20475264
Alignment:
Q  111 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccg 209  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||   |||  ||| ||| ||||||||||  |||| || || || ||||||||||||||||    
T  20475409 tgggggcaaccaagccaggaaagaaattcactagtgtagtcctagttct-tagttctcagcaaactccaagtttacaacttatcacctaggacctacccg 20475311  T
Q  210 tactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || ||        ||||||||||| || ||||||||| ||||||| |||||||||    
T  20475310 tattg--------acttcaacctaggagctcctagatctgagatcccatctcact 20475264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 8163142 - 8163074
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||| ||||||| ||||| ||||| ||| ||| |||||||||||| ||||||| ||||||||||    
T  8163142 tttgttaacacagttcgatgcaatgtcacgtacgtcttggggctaccaagtcaggaagaaaatccacta 8163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 30947324 - 30947392
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||| ||| |||| |||||||| |||||||| ||| |||||||||||| |||||||||||| |||||    
T  30947324 tttgttgacctagtttggtgcaacttcacctacatctaggggctaccaagtcaggaaggaaattcacta 30947392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 20476715 - 20476669
Alignment:
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    |||| ||||||||||||||| ||||||||||| |||| |||||||||    
T  20476715 tactttgggggctaccaagctaggaaggaaattcactggtgtagtcc 20476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 12952594 - 12952643
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||||||||||| || ||||||||  ||||||| |||||||||    
T  12952594 ccgtactgacttcaacctaggagctcctagacctgagatcccatctcact 12952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 21713517 - 21713452
Alignment:
Q  79 gttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||| |||||||| |||||||| | | |||||  |||| |||||||||||||||||||    
T  21713517 gttaacccagtttggtgcaacatcacctacatgtaggggcatccaaaccaggaaggaaatccacta 21713452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 28645830 - 28645773
Alignment:
Q  80 ttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaa 136  Q
    |||||| ||||| |||||||||||||||| || ||||| ||||||| |||||||||||    
T  28645830 ttaaccaagttctgtgcaacgtcacctacatccgggggataccaagtcaggaaggaaa 28645773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 18593566 - 18593598
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac 108  Q
    ||||||||||||||||||||||| |||||||||    
T  18593566 tttgttaacccagttcggtgcaatgtcacctac 18593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 23801939 - 23801868
Alignment:
Q  112 gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 184  Q
    |||||||||||||| ||||| |||||||||||  ||||||| ||||| | || ||| | ||||||||||||||    
T  23801939 gggggctaccaagcaaggaatgaaatccactaaagtagtccttattcta-agttctcaccaaactcctcgttt 23801868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 27107556 - 27107639
Alignment:
Q  131 aggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactg 214  Q
    ||||||||||||| |||||||| ||||| | || ||| ||||||||||  |||| || || | ||||||||||||||||||||||    
T  27107556 aggaaatccactattgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactg 27107639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 170; Significance: 5e-91; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 9 - 356
Target Start/End: Complemental strand, 17209 - 16867
Alignment:
Q  9 atgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcaccta 107  Q
    ||||||||||||  ||||||||| || ||||| ||||  |||| |||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  17209 atgtttcgaacattaagctaacaaaagacaagtaaaacacaaaacataaaagtaaatggcatagtgagtttgttaacccagttcggtgcaacgtcaccta 17110  T
Q  108 ctctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctac 206  Q
    || |||||   ||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||||| ||| ||    
T  17109 ctatggggctaaccaatccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatatgacctagtacccac 17010  T
Q  207 ccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaa 306  Q
            ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| | |    
T  17009 --------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaactaatcacagcccctgtgattctcaaattacga 16918  T
Q  307 acacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtactt 356  Q
    | ||||| |||||||||||||||| ||||||||||| |||| |||||||||    
T  16917 atacaatcaaatgaagttaccttcaaaacaaaacaattaaacaccgtactt 16867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 56 - 369
Target Start/End: Original strand, 36268 - 36573
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 155  Q
    |||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  36268 aaagaaaaaggcacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtcctta 36367  T
Q  156 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatct 255  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||||        | ||||||||||||||||| |||||||||||| ||||| |     
T  36368 ttcaaaagctctcagcaaacttctcgtttgcactaatgacctaggacctac--------cggtactgacttcaacctaggaactcctagatctgaga-cc 36458  T
Q  256 catctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttca-aacaaaacaactaaataccgtac 354  Q
    |||||||||||||||||| | |||||||||| ||||||||||| |||  | ||||||| ||||||||||||||||| ||||||||||||||  ||||| |    
T  36459 catctcactcccttacaaataatcacagcccctgtgattctcagattatagacacaatcaaatgaagttaccttcagaacaaaacaactaatcaccgtgc 36558  T
Q  355 ttcagagcttaggtg 369  Q
    |||| ||||| ||||    
T  36559 ttcacagctttggtg 36573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 156; Significance: 1e-82; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 70 - 345
Target Start/End: Original strand, 103090 - 103358
Alignment:
Q  70 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 169  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  103090 agtgagtttgttaacccagttcagtgcaacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctga 103189  T
Q  170 gcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccctt 269  Q
    |||||||||| |||||||| || ||||||||||||||        ||||||||||||||||||| |||||||||||| ||||||| | ||||||||||||    
T  103190 gcaaactccttgtttgcaccaaagacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccttctcactccctt 103281  T
Q  270 acaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaa 345  Q
    |||| |||||||| ||| ||| |||||||  || || ||||||| |||||||||||| ||| |||||||||||||||    
T  103282 acaaatgatcacaacccctgtaattctcagtttacagacacaatcaaatgaagttacattcaaaacaaaacaactaa 103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 74 - 364
Target Start/End: Original strand, 3111 - 3392
Alignment:
Q  74 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 172  Q
    |||||||||| ||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  3111 agtttgttaatccagttcggtgacaaca-cacctactctggaggctaccaagccaggaaggaaatccactagtgtagtacgtattcaacagctctcagca 3209  T
Q  173 aactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttaca 272  Q
    ||  || |||||||||||||||||||||||||||        ||||||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||    
T  3210 aa--ccacgtttgcactaatgacctaggacctac--------ccgtactgatttcaacctaggaactcctagatttgagatcccatctcactctcttaca 3299  T
Q  273 actgatcacagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 364  Q
    |||||||||| ||| |||||| |||||||  |||| |||||  |||||||||||||||||||||| |||||  || ||||||||||| |||||    
T  3300 actgatcacatcccttgtgatactcaaataacaaatacaatcaaaatgaagttaccttcaaacaacacaaccgaacaccgtacttcacagctt 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 57 - 294
Target Start/End: Complemental strand, 53112 - 52886
Alignment:
Q  57 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtat 156  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  53112 aagtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtccttat 53014  T
Q  157 tcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctc 256  Q
    || |||||||| |||||||||||||||| |||||| ||||||||||||||||||          ||  ||||||||| |||||||||||| ||||||| |    
T  53013 tctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt---------ttggtttcaacctaggaactcctagatctgagatccc 52923  T
Q  257 atctcactcccttacaactgatcacagcccgtgtgatt 294  Q
    ||||||||||| ||||||  ||||| |||| |||||||    
T  52922 atctcactccc-tacaaccaatcactgcccctgtgatt 52886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 45903 - 45778
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatg 314  Q
    ||||| ||||||||||||| |||||||| ||| ||||||| ||||| |||||| ||||||| || ||||||| ||| ||| ||| |||   |||||||      
T  45903 ccgtattgacttcaacctaagaactccttgatctgagatcccatcttactccc-tacaactaattacagcccttgtcattatcacattatcaacacaaca 45805  T
Q  315 aa--atgaagttaccttcaaacaaaac 339  Q
    ||  ||||||||||||| |||||||||    
T  45804 aaagatgaagttaccttaaaacaaaac 45778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 16391 - 16201
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  16391 cacagtgagtttgttaacccagttcggtgcaacgtcaaccactttgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctc 16292  T
Q  167 ttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    | | |||||||||| ||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| |||||||||||||||||    
T  16291 tcaacaaactcctcatttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatctcatctcact 16201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 36986 - 37177
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36986 cacaatgagtttgttgacccagttcggtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 37085  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||| | |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  37086 ctcagcaaactcctcgtttacaccatatgacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 37177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 25852 - 25661
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| ||||||| || ||||||||||||| |||   ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  25852 cacaatgagtttattgacccagttcggtgacaaacacacctactctgggagctaccaagccaggaaggaaatccactggtgtagtccttattcaatagct 25753  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || | |||||||||||||| ||||| |||||||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  25752 ctcaacaaactcctcgtttacactagatgacctaggacctacccgta------ta--gacttcaacctacgaactcctagatctgagatcccatctcact 25661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 106 - 264
Target Start/End: Complemental strand, 110395 - 110244
Alignment:
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacct 204  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  110395 tactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacct 110296  T
Q  205 acccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    |||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  110295 acccgta------ta--gacttcaacctaggaactcctagatttgagatcccatctcact 110244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 40316 - 40506
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  40316 cacagtgagtttgttgacccagttcagtgacaaca-cacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagct 40414  T
Q  166 cttagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || |||||||||||||||| ||| | ||||||||||||||||| |||      ||  || ||||||||| |||||||||||| ||||||| |||||||||    
T  40415 ctcagcaaactcctcgtttacactttatgacctaggacctaccagta------ta--gaattcaacctaggaactcctagatctgagatcccatctcact 40506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 17467 - 17266
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    |||||||||  ||||||||||||||| ||||||||  ||| |||   ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |    
T  17467 aaagtaaaaaacacagtgagtttgttgacccagtttcgtgacaaacacacctactctgggggctaccaagtcaggaagaaaatccactagtgtagtcctt 17368  T
Q  155 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatc 254  Q
    |||| |||||||| |||||| ||||||||  |||||| |||||||||||||||||||      ||  ||||||||||||  ||||| ||||| |||||||    
T  17367 attctatagctctcagcaaattcctcgttaacactaaagacctaggacctacccgta------ta--gacttcaacctagaaactcttagatctgagatc 17276  T
Q  255 tcatctcact 264  Q
    ||||||||||    
T  17275 tcatctcact 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 81; Significance: 6e-38; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 67 - 264
Target Start/End: Complemental strand, 7718 - 7528
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||| ||||||||| |||   ||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  7718 cacagtgagtttgttgacctagttcggtgacaaacacacttactctaggggctaccaagccaggaaggaaattcactagtgtagtccttattctatagct 7619  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    || | |||||||||| ||| |||||| |||||||||||||||| ||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  7618 ctcaacaaactcctcatttacactaaagacctaggacctacccata------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 7528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 264
Target Start/End: Complemental strand, 18302 - 18115
Alignment:
Q  70 agtgagtttgttaacccagttcggtg-caacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 167  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  18302 agtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctct 18203  T
Q  168 tagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
     ||||||||||||| || |||||| || ||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||| ||||    
T  18202 cagcaaactcctcgattacactaaaga-ctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatcacact 18115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 264
Target Start/End: Complemental strand, 27696 - 27509
Alignment:
Q  70 agtgagtttgttaacccagttcggtg-caacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 167  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  27696 agtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctct 27597  T
Q  168 tagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
     ||||||||||||| || |||||| || ||||||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||| ||||    
T  27596 cagcaaactcctcgattacactaaaga-ctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatcacact 27509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 211
Target Start/End: Original strand, 26385 - 26530
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| ||||| ||||||| |||   |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||  |||||    
T  26385 cacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagct 26484  T
Q  166 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 211  Q
    || | |||||||||| ||| |||||| |||||||||||||||||||    
T  26485 ctcaacaaactcctcatttacactaaagacctaggacctacccgta 26530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 61662 - 61461
Alignment:
Q  56 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 154  Q
    ||||||||  ||||| |||||||||| ||||||||||||| |||   ||  |||||||||||||||||||||| |||||||||||||||||||||| | |    
T  61662 aaagtaaatagcacaatgagtttgttgacccagttcggtgacaaacacat-tactctgggggctaccaagccaagaaggaaatccactagtgtagttctt 61564  T
Q  155 attcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 253  Q
    ||||||||||||| ||||||||| | |||| ||||| |||||||| ||||||||||||      ||  |||||||||||| |||||||||||| ||||||    
T  61563 attcaatagctctcagcaaactcattgtttacactatatgacctaagacctacccgta------ta--gacttcaacctaggaactcctagatctgagat 61472  T
Q  254 ctcatctcact 264  Q
    | |||||||||    
T  61471 cccatctcact 61461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 50270 - 50130
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  50270 cacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 50171  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggaccta 205  Q
    || | |||| ||||||||| ||||| |||||||| ||||||    
T  50170 ctcaacaaaatcctcgtttacactatatgacctacgaccta 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 48373 - 48332
Alignment:
Q  223 acttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||| |||||||||||| | |||||||||||||||    
T  48373 acttcaacctaggaactcctagatctaagatctcatctcact 48332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 36609 - 36715
Alignment:
Q  102 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 200  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  36609 cacctactctggaggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 36708  T
Q  201 acctacc 207  Q
    |||||||    
T  36709 acctacc 36715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 87716 - 87861
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 164  Q
    |||| |||||||||| ||||||||||||| |||   ||||||| | |||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  87716 cacaatgagtttgttgacccagttcggtgacaaacacacctacgtatgggggct-ccaagctaggaaggaaatccactagtgtagtccttattcaatagc 87814  T
Q  165 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 210  Q
    ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  87815 tctcagcaaactcctcgtttacactatatgacctaggacctacccgt 87861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 16803 - 16657
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    ||||||||||||||| || |||||||||| |||   ||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||    
T  16803 cacagtgagtttgttgactcagttcggtgacaaacacacctactccgggggctaccaagccagaaaggaaatccactactgtagtccttattcaaaagct 16704  T
Q  166 cttagcaaactcctcgtttgcac-taatgacctaggacctacccgta 211  Q
     | |||||||||||| ||| ||| | |||||||||||||||||||||    
T  16703 ataagcaaactcctcatttacactttatgacctaggacctacccgta 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 259
Target Start/End: Complemental strand, 2537 - 2351
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| |||||||||| ||||| ||||||| |||   |||||||| | ||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||    
T  2537 cacaatgagtttgttgacccatttcggtgacaagcacacctactttaggggctatcaagccaggaaggaagtccaatagtgtagtccttattcaatagct 2438  T
Q  166 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatc 259  Q
    || |||||||||| ||||| ||||| |||||||||||||||        ||||||  |||||||||||| |||||||||||| ||||||| ||||    
T  2437 ctcagcaaactccccgtttacactatatgacctaggaccta--------gccgtatagacttcaacctaggaactcctagatctgagatcccatc 2351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 5627 - 5759
Alignment:
Q  67 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 165  Q
    |||| ||| |||||| ||||||||||||| |||   |||||||||| ||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  5627 cacaatgaatttgttgacccagttcggtgtcaaacacacctactctaggg-ctaccaagcaaggaaggaaatccacaagtgtagtccttattcaatagct 5725  T
Q  166 cttagcaaactcctcgtttgcacta-atgaccta 198  Q
    || ||||||||| |||||| ||||| ||||||||    
T  5726 ctcagcaaactcatcgtttacactatatgaccta 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 262
Target Start/End: Original strand, 37393 - 37536
Alignment:
Q  113 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgta 211  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||||||| ||| | ||| | ||||||||||||||||||     
T  37393 ggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgt- 37491  T
Q  212 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 262  Q
       |   |||   ||||||||| |||||||||||||||||||| |||||||    
T  37492 ---ctagact---ttcaacctaggaactcctagatatgagatcccatctca 37536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 18540 - 18607
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||    
T  18540 tttgttgacccagttcggtgcaacttcacctacttttggggctaccaagccatgaaggaaatccacta 18607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 2247 - 2182
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatcca 140  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  2247 tttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagccaggaaagaaatcca 2182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 202416 - 202468
Alignment:
Q  106 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  202416 tactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattc 202468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 202523 - 202612
Alignment:
Q  222 gacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaa 312  Q
    |||||||||||| ||||| |||||| ||||||| |||||||||  | ||||||  |||||||||| | ||||| ||| ||| |||||||||    
T  202523 gacttcaacctaggaacttctagatctgagatcccatctcactatcctacaaccaatcacagcccctatgattatcagatt-caaacacaa 202612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 10204 - 10128
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 152  Q
    ||||||||||||||||||| |||   ||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  10204 ttgttaacccagttcggtgacaaatacacttactcttggggctaccaagtcagaaaggaaatccactagtgtagtcc 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 10067 - 10024
Alignment:
Q  221 tgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||| | |||||||||||| |||||||||||||||||    
T  10067 tgacttcaaccgaggaactcctagatctgagatctcatctcact 10024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 9969 - 10030
Alignment:
Q  83 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||||||||| |||||    
T  9969 acccagttcggtgcaacctaacctacatctgggggctacaaagccaggaaggaaattcacta 10030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 13596 - 13672
Alignment:
Q  75 gtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 150  Q
    ||||||||| ||||||||||| |||   |||||||||| |||||||||||||||||||| |||| || |||||||||    
T  13596 gtttgttaatccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaattcattagtgtagt 13672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 13729 - 13778
Alignment:
Q  215 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||| ||||||||||||| |||||| ||||  |||||||||||||||||    
T  13729 ccgtattgacttcaacctaggaactcatagacctgagatctcatctcact 13778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 8822 - 8754
Alignment:
Q  76 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 143  Q
    |||||||||||||| |||||||||||||||||| ||||||| |  ||||||||||||| ||||| ||||    
T  8822 tttgttaacccagtacggtgcaacgtcacctacatctggggacatccaagccaggaagaaaatctacta 8754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 5409 - 5491
Alignment:
Q  77 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 158  Q
    ||||||||||||||||||| |||   |||||||||| ||||||   ||| ||| ||||||||||||||||||||||| |||||    
T  5409 ttgttaacccagttcggtgacaaacacacctactctaggggctgttaagtcagaaaggaaatccactagtgtagtccttattc 5491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 5548 - 5589
Alignment:
Q  223 acttcaacctatgaactcctagatatgagatctcatctcact 264  Q
    ||||||||||| |||||||||||| ||||||| |||||||||    
T  5548 acttcaacctaggaactcctagatctgagatcccatctcact 5589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 3650 - 3694
Alignment:
Q  78 tgttaacccagttcggtgcaacgtcacctac-tctgggggctacc 121  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||    
T  3650 tgttaaccgagttcagtgcaacgtcacctacgtctgggggctacc 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University