View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8646_low_6 (Length: 349)
Name: NF8646_low_6
Description: NF8646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8646_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 22805708 - 22806023
Alignment:
| Q |
19 |
catcagtgaatagtattaatcttgggaaaactcatgtaacaccaaaagcggagatggatgttggtaacataaaatcaagaggtcgtgcatcgtcttctgg |
118 |
Q |
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| T |
22805708 |
catcagtgaatagtattaatcttgggaaaactcatgtaacaccaaaagcggagatggatgttggtaacataaaatcaagaggtcgtacattgtcttctgg |
22805807 |
T |
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| Q |
119 |
gaagtctagtgttgggtcatgttcaaatcctagttatgaagttaagtttgtatcaaagcagcagaggcagaaaatcacagataagaaagtcgtgggcaca |
218 |
Q |
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| T |
22805808 |
gaagtctagtgttgggtcatgttcaaatcctagttatgaagttaagtttgtatcaaagcagcagaggcagaaaatcacagataagaaagttgtgggctca |
22805907 |
T |
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| Q |
219 |
atgaatcttgcagataagaacagatgcaatgttggtgataaatccaagacatcttccattaaagttgaaggaaaagaaacaggaagcacaaaaggaagta |
318 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22805908 |
atgaatcttgcagataagaacagatgcaatgttggtaataaatccaagacatcttccattaaagttgaaggaaaagaaacaggaagcacaaaaggaagta |
22806007 |
T |
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| Q |
319 |
acatcagtgttgcaaa |
334 |
Q |
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|||||||||||||||| |
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| T |
22806008 |
acatcagtgttgcaaa |
22806023 |
T |
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