View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8648_low_14 (Length: 250)

Name: NF8648_low_14
Description: NF8648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8648_low_14
NF8648_low_14
[»] chr5 (70 HSPs)
chr5 (1-240)||(14070494-14070747)
chr5 (6-179)||(2050927-2051097)
chr5 (6-179)||(27005377-27005550)
chr5 (29-179)||(14914372-14914518)
chr5 (38-183)||(30574309-30574452)
chr5 (34-179)||(19271859-19272002)
chr5 (12-179)||(41192587-41192752)
chr5 (41-179)||(38010872-38011008)
chr5 (42-180)||(3263444-3263580)
chr5 (49-179)||(9594478-9594606)
chr5 (42-181)||(22920428-22920565)
chr5 (42-179)||(4954466-4954601)
chr5 (42-179)||(8959160-8959295)
chr5 (42-167)||(9596750-9596873)
chr5 (42-180)||(15622043-15622179)
chr5 (42-167)||(28501629-28501752)
chr5 (12-179)||(32379830-32380000)
chr5 (42-181)||(11464059-11464195)
chr5 (12-180)||(31006058-31006222)
chr5 (12-78)||(9599662-9599728)
chr5 (42-176)||(17489351-17489483)
chr5 (42-121)||(33823630-33823709)
chr5 (38-180)||(34381011-34381151)
chr5 (42-118)||(12512852-12512928)
chr5 (29-179)||(36548303-36548451)
chr5 (34-179)||(32634708-32634851)
chr5 (127-183)||(6538866-6538922)
chr5 (110-180)||(39788710-39788778)
chr5 (126-188)||(40223803-40223865)
chr5 (126-179)||(582885-582938)
chr5 (126-175)||(3154661-3154710)
chr5 (108-180)||(9599730-9599800)
chr5 (126-179)||(19437257-19437310)
chr5 (126-183)||(42699053-42699110)
chr5 (29-81)||(4292879-4292931)
chr5 (45-81)||(7080610-7080646)
chr5 (45-81)||(14323907-14323943)
chr5 (38-81)||(3518279-3518322)
chr5 (29-179)||(7077262-7077413)
chr5 (38-81)||(10469879-10469922)
chr5 (42-81)||(10522871-10522910)
chr5 (45-80)||(12401289-12401324)
chr5 (10-81)||(16553600-16553671)
chr5 (140-179)||(19844341-19844380)
chr5 (126-181)||(39595270-39595325)
chr5 (38-81)||(43152992-43153035)
chr5 (6-44)||(372608-372646)
chr5 (6-44)||(8959305-8959343)
chr5 (142-188)||(16143381-16143427)
chr5 (6-44)||(17489493-17489531)
chr5 (126-180)||(27440478-27440532)
chr5 (129-179)||(35814453-35814503)
chr5 (126-180)||(36581483-36581537)
chr5 (6-44)||(39788608-39788646)
chr5 (140-186)||(40039283-40039329)
chr5 (141-186)||(125085-125130)
chr5 (126-179)||(7144577-7144630)
chr5 (146-179)||(21353553-21353586)
chr5 (126-183)||(28903987-28904044)
chr5 (126-183)||(28940382-28940439)
chr5 (126-179)||(29803225-29803278)
chr5 (126-182)||(41175723-41175780)
chr5 (29-81)||(3722999-3723051)
chr5 (45-81)||(6420740-6420776)
chr5 (29-81)||(12417722-12417774)
chr5 (135-179)||(34428160-34428204)
chr5 (29-81)||(34952328-34952380)
chr5 (135-179)||(36572691-36572735)
chr5 (127-179)||(38500943-38500995)
chr5 (45-81)||(41210453-41210489)
[»] chr2 (79 HSPs)
chr2 (29-179)||(36909766-36909914)
chr2 (41-179)||(29893610-29893746)
chr2 (6-179)||(5954385-5954554)
chr2 (38-179)||(6884910-6885049)
chr2 (42-179)||(36383462-36383597)
chr2 (38-179)||(44484588-44484727)
chr2 (12-179)||(6851565-6851730)
chr2 (42-179)||(3196023-3196158)
chr2 (29-180)||(30973914-30974061)
chr2 (12-179)||(27540015-27540180)
chr2 (6-179)||(14954499-14954670)
chr2 (42-179)||(34144488-34144622)
chr2 (42-190)||(23048019-23048165)
chr2 (33-179)||(10687941-10688085)
chr2 (42-167)||(30487388-30487503)
chr2 (29-81)||(5962734-5962786)
chr2 (12-176)||(19631389-19631553)
chr2 (12-176)||(19828290-19828454)
chr2 (4-75)||(29582278-29582349)
chr2 (42-122)||(37966411-37966491)
chr2 (45-179)||(3091741-3091873)
chr2 (12-178)||(20974354-20974521)
chr2 (4-122)||(29611825-29611943)
chr2 (49-180)||(28165128-28165257)
chr2 (45-179)||(5067580-5067717)
chr2 (29-178)||(26321621-26321767)
chr2 (96-176)||(44085277-44085355)
chr2 (29-122)||(10550382-10550475)
chr2 (33-81)||(15226984-15227032)
chr2 (92-179)||(27307217-27307302)
chr2 (42-178)||(38246687-38246821)
chr2 (38-81)||(4432423-4432466)
chr2 (139-182)||(30220841-30220884)
chr2 (49-179)||(3299048-3299176)
chr2 (45-179)||(8352835-8352967)
chr2 (45-179)||(29168725-29168857)
chr2 (110-182)||(9695065-9695135)
chr2 (126-179)||(10288150-10288203)
chr2 (126-179)||(13553147-13553200)
chr2 (123-183)||(14255298-14255359)
chr2 (142-179)||(14891112-14891149)
chr2 (126-183)||(30856803-30856860)
chr2 (91-179)||(35171211-35171297)
chr2 (3-122)||(42678601-42678730)
chr2 (42-179)||(44018185-44018319)
chr2 (141-185)||(3039858-3039902)
chr2 (135-183)||(5095980-5096028)
chr2 (33-81)||(10466115-10466163)
chr2 (45-81)||(27307184-27307220)
chr2 (29-81)||(29871278-29871330)
chr2 (29-81)||(33857313-33857365)
chr2 (29-81)||(38572035-38572087)
chr2 (135-179)||(39247490-39247534)
chr2 (92-179)||(42141580-42141665)
chr2 (29-81)||(43936383-43936435)
chr2 (42-81)||(8757640-8757679)
chr2 (135-178)||(26321892-26321935)
chr2 (38-81)||(35518371-35518414)
chr2 (126-181)||(43621966-43622021)
chr2 (45-179)||(6365186-6365318)
chr2 (45-179)||(11229260-11229392)
chr2 (6-44)||(12192092-12192130)
chr2 (38-80)||(23391159-23391201)
chr2 (3-73)||(25994205-25994274)
chr2 (126-179)||(14140355-14140408)
chr2 (54-179)||(20247815-20247938)
chr2 (135-180)||(22303202-22303247)
chr2 (125-181)||(8329895-8329951)
chr2 (112-176)||(8805233-8805297)
chr2 (6-46)||(10550347-10550387)
chr2 (126-182)||(12600045-12600101)
chr2 (45-81)||(23358518-23358554)
chr2 (29-81)||(30413655-30413707)
chr2 (123-179)||(36435681-36435737)
chr2 (12-44)||(36582401-36582433)
chr2 (45-81)||(37631306-37631342)
chr2 (6-46)||(42141498-42141538)
chr2 (45-81)||(43621887-43621923)
chr2 (45-81)||(43725301-43725337)
[»] chr4 (105 HSPs)
chr4 (29-179)||(13267401-13267549)
chr4 (6-179)||(40721864-40722035)
chr4 (4-177)||(29949571-29949743)
chr4 (42-179)||(47105911-47106046)
chr4 (34-179)||(55267929-55268072)
chr4 (42-179)||(5208263-5208398)
chr4 (42-179)||(27001345-27001480)
chr4 (42-179)||(51377229-51377364)
chr4 (42-181)||(7037420-7037557)
chr4 (5-176)||(924961-925130)
chr4 (12-147)||(31048920-31049053)
chr4 (42-181)||(32901327-32901464)
chr4 (12-179)||(45779197-45779362)
chr4 (45-179)||(3222989-3223121)
chr4 (42-179)||(31221413-31221548)
chr4 (45-180)||(1031754-1031887)
chr4 (6-81)||(19315002-19315076)
chr4 (29-180)||(39010061-39010209)
chr4 (29-179)||(41495013-41495161)
chr4 (45-179)||(44368141-44368273)
chr4 (29-179)||(56025256-56025404)
chr4 (12-81)||(20956488-20956557)
chr4 (46-179)||(24235320-24235451)
chr4 (12-81)||(54165065-54165134)
chr4 (39-179)||(1796366-1796503)
chr4 (29-81)||(15515880-15515932)
chr4 (38-81)||(8026696-8026739)
chr4 (6-81)||(29693967-29694042)
chr4 (41-180)||(51224773-51224910)
chr4 (54-180)||(8680940-8681064)
chr4 (29-179)||(20632571-20632719)
chr4 (12-78)||(43434439-43434505)
chr4 (126-179)||(40629358-40629411)
chr4 (38-179)||(49424752-49424891)
chr4 (42-179)||(52669545-52669680)
chr4 (29-81)||(2193732-2193784)
chr4 (29-81)||(32365590-32365642)
chr4 (29-81)||(36728545-36728597)
chr4 (41-81)||(53384276-53384316)
chr4 (126-189)||(20056386-20056449)
chr4 (1-44)||(20056527-20056570)
chr4 (120-175)||(33484120-33484175)
chr4 (12-179)||(44170526-44170690)
chr4 (45-179)||(4896439-4896571)
chr4 (29-183)||(19720564-19720716)
chr4 (42-164)||(25936255-25936375)
chr4 (126-179)||(169520-169573)
chr4 (126-179)||(8455861-8455914)
chr4 (12-81)||(8455999-8456068)
chr4 (42-183)||(9032776-9032915)
chr4 (3-44)||(15638275-15638316)
chr4 (29-178)||(46844164-46844311)
chr4 (126-179)||(47014939-47014992)
chr4 (126-183)||(51039134-51039191)
chr4 (91-179)||(53662413-53662499)
chr4 (42-183)||(4100690-4100830)
chr4 (45-181)||(18880783-18880917)
chr4 (127-179)||(23094376-23094428)
chr4 (126-182)||(31240645-31240701)
chr4 (127-179)||(42853939-42853991)
chr4 (126-181)||(3475867-3475922)
chr4 (42-81)||(15638226-15638265)
chr4 (29-180)||(18568738-18568887)
chr4 (45-179)||(18874863-18874992)
chr4 (6-81)||(31147327-31147402)
chr4 (140-179)||(39449173-39449212)
chr4 (140-187)||(44626597-44626644)
chr4 (42-81)||(48650192-48650231)
chr4 (34-81)||(53662370-53662417)
chr4 (128-183)||(54251470-54251525)
chr4 (125-176)||(54921554-54921605)
chr4 (45-179)||(9162066-9162198)
chr4 (6-44)||(18568703-18568741)
chr4 (126-180)||(25523216-25523270)
chr4 (94-179)||(29513684-29513767)
chr4 (140-182)||(31995948-31995990)
chr4 (2-44)||(32365551-32365593)
chr4 (6-179)||(33820239-33820407)
chr4 (141-179)||(35017153-35017191)
chr4 (126-179)||(42815404-42815458)
chr4 (27-81)||(45176654-45176708)
chr4 (91-188)||(45548769-45548864)
chr4 (126-179)||(9472531-9472584)
chr4 (126-179)||(12241058-12241111)
chr4 (3-44)||(19720526-19720567)
chr4 (6-39)||(32901479-32901512)
chr4 (142-179)||(33093138-33093175)
chr4 (126-179)||(34116558-34116611)
chr4 (126-179)||(34259815-34259868)
chr4 (126-179)||(36444413-36444466)
chr4 (126-179)||(44272828-44272881)
chr4 (4-81)||(46912698-46912774)
chr4 (126-183)||(55960696-55960753)
chr4 (45-81)||(5234410-5234446)
chr4 (6-46)||(19910953-19910993)
chr4 (127-179)||(29863551-29863603)
chr4 (45-81)||(31658015-31658051)
chr4 (140-176)||(32303317-32303353)
chr4 (45-81)||(33860485-33860521)
chr4 (45-81)||(34027992-34028028)
chr4 (45-81)||(34974549-34974585)
chr4 (45-81)||(39844197-39844233)
chr4 (135-179)||(51318703-51318747)
chr4 (135-179)||(54800998-54801042)
chr4 (8-44)||(55642495-55642531)
[»] chr1 (80 HSPs)
chr1 (12-189)||(42256450-42256625)
chr1 (6-181)||(5959386-5959559)
chr1 (42-182)||(13813555-13813693)
chr1 (33-179)||(26501295-26501439)
chr1 (42-179)||(29489295-29489430)
chr1 (42-176)||(25130706-25130838)
chr1 (34-179)||(7371876-7372019)
chr1 (29-179)||(7078423-7078571)
chr1 (12-81)||(2257600-2257669)
chr1 (10-79)||(48678857-48678926)
chr1 (45-180)||(25995459-25995592)
chr1 (14-81)||(29362600-29362667)
chr1 (42-180)||(27578181-27578317)
chr1 (42-179)||(9011645-9011780)
chr1 (58-179)||(26585125-26585244)
chr1 (46-179)||(27352630-27352761)
chr1 (42-179)||(36669306-36669441)
chr1 (6-175)||(43056720-43056887)
chr1 (55-179)||(11097833-11097955)
chr1 (12-179)||(35972710-35972875)
chr1 (29-183)||(15061841-15061993)
chr1 (12-81)||(27563580-27563649)
chr1 (33-180)||(48871882-48872026)
chr1 (45-179)||(30631784-30631915)
chr1 (29-185)||(34395843-34395996)
chr1 (42-179)||(6829721-6829854)
chr1 (28-179)||(43457742-43457890)
chr1 (29-179)||(42843267-42843415)
chr1 (29-179)||(43196012-43196160)
chr1 (12-81)||(3607940-3608009)
chr1 (45-179)||(19651410-19651540)
chr1 (128-185)||(38019524-38019581)
chr1 (126-179)||(46902613-46902666)
chr1 (29-81)||(19920858-19920910)
chr1 (29-81)||(52417627-52417679)
chr1 (33-179)||(51193060-51193202)
chr1 (126-180)||(3919299-3919353)
chr1 (126-183)||(46281432-46281490)
chr1 (29-179)||(50777346-50777494)
chr1 (126-179)||(18610773-18610826)
chr1 (33-81)||(25239163-25239212)
chr1 (91-178)||(51157488-51157574)
chr1 (126-179)||(51168786-51168839)
chr1 (33-81)||(6841887-6841935)
chr1 (89-179)||(11812387-11812475)
chr1 (29-80)||(30530322-30530373)
chr1 (4-43)||(33660190-33660229)
chr1 (129-180)||(34157805-34157856)
chr1 (91-181)||(49699737-49699825)
chr1 (4-43)||(51193019-51193058)
chr1 (126-184)||(14442255-14442313)
chr1 (60-178)||(18959005-18959120)
chr1 (126-180)||(49621362-49621416)
chr1 (6-44)||(50797925-50797963)
chr1 (125-179)||(8934611-8934667)
chr1 (126-183)||(16658434-16658491)
chr1 (135-176)||(25994943-25994984)
chr1 (138-179)||(26101394-26101435)
chr1 (125-178)||(26839383-26839436)
chr1 (126-179)||(30530592-30530645)
chr1 (7-52)||(48896587-48896632)
chr1 (126-179)||(50226897-50226950)
chr1 (12-81)||(51704693-51704762)
chr1 (142-183)||(52261335-52261376)
chr1 (41-81)||(2827645-2827685)
chr1 (45-81)||(5477102-5477138)
chr1 (126-178)||(9882677-9882729)
chr1 (12-44)||(10385559-10385591)
chr1 (45-81)||(21255724-21255760)
chr1 (45-81)||(32966363-32966399)
chr1 (29-81)||(34002243-34002295)
chr1 (49-81)||(34941863-34941895)
chr1 (45-81)||(35846258-35846294)
chr1 (127-179)||(36794615-36794667)
chr1 (45-81)||(36930695-36930731)
chr1 (127-179)||(43755697-43755749)
chr1 (141-181)||(45350128-45350168)
chr1 (29-81)||(45470762-45470814)
chr1 (45-81)||(48325318-48325354)
chr1 (89-176)||(50145784-50145869)
[»] chr8 (76 HSPs)
chr8 (29-176)||(7129536-7129681)
chr8 (12-181)||(29509264-29509431)
chr8 (42-179)||(41273515-41273650)
chr8 (29-179)||(37562064-37562212)
chr8 (34-179)||(1065417-1065560)
chr8 (42-179)||(30927867-30928002)
chr8 (12-81)||(32185572-32185641)
chr8 (42-179)||(41293657-41293792)
chr8 (12-167)||(20895900-20896053)
chr8 (42-167)||(19723142-19723263)
chr8 (91-180)||(10344323-10344410)
chr8 (91-176)||(14228710-14228793)
chr8 (42-179)||(20288533-20288668)
chr8 (42-179)||(21075162-21075297)
chr8 (58-177)||(43186298-43186415)
chr8 (2-181)||(5924808-5924997)
chr8 (29-179)||(36497661-36497809)
chr8 (5-179)||(36064030-36064214)
chr8 (29-179)||(2597083-2597230)
chr8 (41-180)||(13884315-13884452)
chr8 (127-181)||(14531619-14531673)
chr8 (14-172)||(39359743-39359899)
chr8 (14-75)||(36015659-36015720)
chr8 (46-186)||(6004937-6005075)
chr8 (42-176)||(6656275-6656413)
chr8 (42-176)||(6736677-6736815)
chr8 (38-179)||(34970207-34970344)
chr8 (125-176)||(102451-102502)
chr8 (126-181)||(35937530-35937585)
chr8 (127-181)||(28623130-28623184)
chr8 (3-81)||(35967303-35967381)
chr8 (6-44)||(37343522-37343560)
chr8 (39-81)||(40211680-40211722)
chr8 (38-179)||(5742589-5742728)
chr8 (2-43)||(5925201-5925242)
chr8 (54-179)||(12045601-12045724)
chr8 (126-179)||(37343374-37343427)
chr8 (54-179)||(37784322-37784445)
chr8 (120-181)||(38844802-38844863)
chr8 (29-81)||(5642313-5642365)
chr8 (29-81)||(5644254-5644306)
chr8 (1-81)||(13962025-13962105)
chr8 (34-179)||(23952494-23952636)
chr8 (123-179)||(26294189-26294245)
chr8 (123-179)||(26307446-26307502)
chr8 (135-179)||(39021470-39021514)
chr8 (33-81)||(39258982-39259030)
chr8 (126-182)||(40459780-40459836)
chr8 (29-80)||(30129506-30129557)
chr8 (1-44)||(30129554-30129597)
chr8 (42-81)||(33817253-33817292)
chr8 (35-81)||(8233425-8233471)
chr8 (47-81)||(13267027-13267061)
chr8 (129-179)||(40842014-40842064)
chr8 (127-180)||(10591892-10591945)
chr8 (142-179)||(27776094-27776131)
chr8 (126-179)||(32674250-32674303)
chr8 (29-166)||(35595223-35595358)
chr8 (126-179)||(40380281-40380334)
chr8 (29-81)||(41519954-41520007)
chr8 (126-179)||(42012608-42012661)
chr8 (126-179)||(45101396-45101449)
chr8 (45-81)||(5359434-5359470)
chr8 (45-81)||(6825216-6825252)
chr8 (29-81)||(8888348-8888400)
chr8 (45-81)||(9046249-9046285)
chr8 (126-182)||(21273728-21273784)
chr8 (45-81)||(24946098-24946134)
chr8 (29-81)||(28623048-28623100)
chr8 (139-175)||(33511744-33511780)
chr8 (127-179)||(37873124-37873176)
chr8 (41-81)||(38504266-38504306)
chr8 (49-81)||(38844734-38844766)
chr8 (45-81)||(41675308-41675344)
chr8 (151-179)||(41935279-41935307)
chr8 (126-186)||(44380632-44380692)
[»] chr7 (64 HSPs)
chr7 (4-176)||(1789994-1790164)
chr7 (42-184)||(33050178-33050318)
chr7 (42-179)||(42431723-42431858)
chr7 (42-179)||(30864353-30864488)
chr7 (45-180)||(44175544-44175677)
chr7 (38-179)||(27164769-27164908)
chr7 (42-180)||(29162215-29162351)
chr7 (2-80)||(38990198-38990276)
chr7 (41-179)||(44511139-44511275)
chr7 (38-122)||(26041365-26041449)
chr7 (7-123)||(49025215-49025331)
chr7 (29-181)||(17500695-17500845)
chr7 (29-181)||(17552369-17552519)
chr7 (29-185)||(25614744-25614898)
chr7 (6-81)||(48086955-48087030)
chr7 (41-178)||(10014890-10015025)
chr7 (38-179)||(20406541-20406680)
chr7 (42-179)||(38978492-38978627)
chr7 (38-183)||(39369298-39369441)
chr7 (6-179)||(48522156-48522327)
chr7 (45-181)||(2346998-2347132)
chr7 (42-178)||(37325755-37325889)
chr7 (29-185)||(37385156-37385310)
chr7 (129-180)||(29763829-29763880)
chr7 (42-81)||(35005035-35005074)
chr7 (29-179)||(42060656-42060805)
chr7 (42-184)||(116626-116766)
chr7 (45-179)||(45607024-45607156)
chr7 (41-79)||(48057432-48057470)
chr7 (126-179)||(19426580-19426633)
chr7 (126-179)||(40693546-40693599)
chr7 (126-179)||(43079650-43079703)
chr7 (91-179)||(45555974-45556059)
chr7 (29-81)||(10161853-10161905)
chr7 (29-81)||(17157229-17157281)
chr7 (45-181)||(48866869-48867003)
chr7 (5-44)||(1838346-1838385)
chr7 (38-81)||(2005825-2005868)
chr7 (38-81)||(2600466-2600509)
chr7 (126-181)||(26153644-26153698)
chr7 (42-81)||(32315922-32315961)
chr7 (129-176)||(40760789-40760836)
chr7 (6-44)||(8742528-8742566)
chr7 (126-184)||(12141894-12141952)
chr7 (126-180)||(37969930-37969984)
chr7 (126-179)||(4971290-4971343)
chr7 (127-183)||(22638902-22638959)
chr7 (128-185)||(23844959-23845016)
chr7 (126-179)||(28548239-28548292)
chr7 (91-179)||(33881690-33881776)
chr7 (126-179)||(38023442-38023495)
chr7 (7-80)||(42118598-42118671)
chr7 (135-180)||(49167882-49167927)
chr7 (141-181)||(1814340-1814380)
chr7 (29-81)||(8742479-8742531)
chr7 (127-179)||(16567316-16567368)
chr7 (127-179)||(16598294-16598346)
chr7 (45-81)||(21588866-21588902)
chr7 (49-81)||(25427817-25427849)
chr7 (45-81)||(25887679-25887715)
chr7 (93-176)||(35857500-35857581)
chr7 (45-81)||(37351929-37351965)
chr7 (45-81)||(47193023-47193059)
chr7 (29-81)||(47530214-47530266)
[»] chr3 (88 HSPs)
chr3 (38-179)||(52454024-52454165)
chr3 (42-181)||(11327106-11327243)
chr3 (42-179)||(32931854-32931989)
chr3 (6-178)||(40419545-40419712)
chr3 (38-181)||(50879593-50879734)
chr3 (42-179)||(3069511-3069645)
chr3 (42-179)||(36818956-36819091)
chr3 (9-81)||(28884576-28884648)
chr3 (42-181)||(13159659-13159796)
chr3 (29-184)||(41877683-41877836)
chr3 (42-180)||(2482610-2482746)
chr3 (45-179)||(20714243-20714375)
chr3 (42-179)||(30400092-30400227)
chr3 (29-179)||(50652388-50652536)
chr3 (126-183)||(1295328-1295385)
chr3 (38-179)||(34021395-34021534)
chr3 (6-81)||(38692227-38692301)
chr3 (33-180)||(50280014-50280159)
chr3 (45-179)||(7153-7285)
chr3 (42-179)||(3957954-3958089)
chr3 (42-179)||(53102838-53102973)
chr3 (12-182)||(7949788-7949953)
chr3 (38-122)||(28263600-28263684)
chr3 (49-179)||(8254027-8254155)
chr3 (126-179)||(45150284-45150337)
chr3 (45-179)||(47849672-47849802)
chr3 (126-182)||(462419-462475)
chr3 (29-81)||(35756076-35756128)
chr3 (29-81)||(54233424-54233476)
chr3 (45-176)||(14207378-14207507)
chr3 (45-176)||(14215126-14215255)
chr3 (38-81)||(54379402-54379445)
chr3 (45-179)||(44855251-44855383)
chr3 (129-179)||(45528963-45529013)
chr3 (45-179)||(46344414-46344546)
chr3 (46-179)||(1901866-1901997)
chr3 (46-179)||(1911312-1911443)
chr3 (38-179)||(2280177-2280316)
chr3 (48-176)||(7039173-7039297)
chr3 (58-179)||(9027873-9027992)
chr3 (126-179)||(18169157-18169210)
chr3 (92-188)||(27162455-27162548)
chr3 (126-183)||(38693585-38693642)
chr3 (126-179)||(38944159-38944212)
chr3 (29-81)||(23906910-23906962)
chr3 (6-81)||(46574251-46574323)
chr3 (135-175)||(49031439-49031479)
chr3 (140-188)||(50657087-50657135)
chr3 (127-179)||(55344315-55344367)
chr3 (33-80)||(1031354-1031401)
chr3 (6-81)||(3484853-3484927)
chr3 (42-81)||(9027709-9027748)
chr3 (5-44)||(12044641-12044680)
chr3 (126-189)||(19418175-19418238)
chr3 (29-121)||(25142684-25142776)
chr3 (60-179)||(36869791-36869908)
chr3 (42-81)||(43149279-43149318)
chr3 (38-81)||(43900868-43900911)
chr3 (5-44)||(53932278-53932317)
chr3 (109-179)||(53932394-53932462)
chr3 (141-179)||(7867744-7867782)
chr3 (6-44)||(23906875-23906913)
chr3 (126-180)||(31176458-31176512)
chr3 (141-179)||(36799398-36799436)
chr3 (6-44)||(43441815-43441853)
chr3 (129-179)||(43499582-43499632)
chr3 (126-179)||(50559229-50559283)
chr3 (129-179)||(51672863-51672913)
chr3 (3-44)||(1208090-1208131)
chr3 (126-182)||(6178443-6178499)
chr3 (2-43)||(13934636-13934677)
chr3 (126-179)||(29800567-29800620)
chr3 (126-179)||(35376569-35376622)
chr3 (126-179)||(37754447-37754500)
chr3 (126-179)||(40159856-40159909)
chr3 (123-179)||(41637294-41637351)
chr3 (126-179)||(43409380-43409433)
chr3 (126-179)||(49196696-49196749)
chr3 (7-44)||(51717586-51717623)
chr3 (110-181)||(1207944-1208013)
chr3 (29-81)||(2009750-2009802)
chr3 (12-44)||(23183613-23183645)
chr3 (45-81)||(35272123-35272159)
chr3 (141-173)||(35987254-35987286)
chr3 (45-81)||(41957609-41957645)
chr3 (33-81)||(48945943-48945991)
chr3 (140-180)||(51137068-51137108)
chr3 (127-183)||(52100257-52100313)
[»] scaffold0332 (1 HSPs)
scaffold0332 (6-179)||(527-698)
[»] chr6 (39 HSPs)
chr6 (39-178)||(12501475-12501612)
chr6 (29-181)||(12499950-12500100)
chr6 (29-181)||(12507279-12507429)
chr6 (29-181)||(12508801-12508951)
chr6 (40-179)||(237332-237469)
chr6 (42-179)||(3339435-3339570)
chr6 (42-179)||(2056783-2056918)
chr6 (42-179)||(17902628-17902763)
chr6 (42-184)||(3660289-3660429)
chr6 (29-183)||(6435032-6435184)
chr6 (60-181)||(32457206-32457325)
chr6 (29-181)||(25924787-25924937)
chr6 (7-81)||(24007436-24007510)
chr6 (42-179)||(11017383-11017517)
chr6 (91-179)||(27334858-27334944)
chr6 (91-179)||(27395598-27395684)
chr6 (29-81)||(1803965-1804017)
chr6 (33-81)||(17835708-17835756)
chr6 (38-81)||(12151789-12151832)
chr6 (45-179)||(12044332-12044462)
chr6 (29-179)||(28965763-28965911)
chr6 (45-182)||(16743205-16743340)
chr6 (112-180)||(28883752-28883820)
chr6 (125-184)||(12280435-12280494)
chr6 (121-179)||(3088973-3089031)
chr6 (126-179)||(9954548-9954601)
chr6 (126-179)||(22492045-22492098)
chr6 (127-184)||(29376734-29376791)
chr6 (142-183)||(32644619-32644660)
chr6 (29-81)||(2881429-2881481)
chr6 (140-176)||(3401087-3401123)
chr6 (33-81)||(4923042-4923090)
chr6 (29-81)||(7693411-7693463)
chr6 (127-179)||(8173331-8173383)
chr6 (123-179)||(8778887-8778943)
chr6 (45-81)||(9188885-9188921)
chr6 (29-81)||(15328585-15328637)
chr6 (29-81)||(30622120-30622172)
chr6 (135-183)||(32784734-32784782)
[»] scaffold0011 (1 HSPs)
scaffold0011 (34-180)||(18594-18738)
[»] scaffold0514 (1 HSPs)
scaffold0514 (38-179)||(1428-1567)
[»] scaffold0085 (1 HSPs)
scaffold0085 (38-176)||(31232-31366)
[»] scaffold0002 (2 HSPs)
scaffold0002 (42-181)||(147192-147329)
scaffold0002 (126-181)||(440716-440771)
[»] scaffold0522 (1 HSPs)
scaffold0522 (46-180)||(2444-2576)
[»] scaffold0172 (1 HSPs)
scaffold0172 (29-182)||(16972-17123)
[»] scaffold0004 (1 HSPs)
scaffold0004 (42-179)||(249078-249213)
[»] scaffold0508 (1 HSPs)
scaffold0508 (45-180)||(11475-11608)
[»] scaffold0026 (1 HSPs)
scaffold0026 (46-181)||(113623-113756)
[»] scaffold0662 (1 HSPs)
scaffold0662 (126-179)||(1078-1131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (126-179)||(36002-36055)
[»] scaffold0003 (1 HSPs)
scaffold0003 (55-179)||(88808-88930)
[»] scaffold0154 (2 HSPs)
scaffold0154 (129-179)||(4315-4365)
scaffold0154 (141-179)||(19724-19762)
[»] scaffold0049 (1 HSPs)
scaffold0049 (125-179)||(72186-72240)
[»] scaffold0024 (1 HSPs)
scaffold0024 (141-175)||(89469-89503)
[»] scaffold0330 (1 HSPs)
scaffold0330 (129-185)||(4035-4092)
[»] scaffold0193 (1 HSPs)
scaffold0193 (45-81)||(24769-24805)
[»] scaffold0009 (1 HSPs)
scaffold0009 (45-81)||(190824-190860)


Alignment Details
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 14070494 - 14070747
Alignment:
Q  1 attatgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagagg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||    
T  14070494 attatgagtagtgatatttgtacatccatttgatgacaactttgtttttctcacttcttattgatcaaaaacaatggagagaaaaaaagtaagagagagg 14070593  T
Q  101 aaaagatcatcatgtgagtatg-----------tgtgagagaaatttgtccaaaagtt---atcacaaaatagttgtacaagtatcatttctcatttatt 186  Q
    |||||| |||||||||||||||           ||||||||||| |||||| ||||||   |||||||||||||||||||| ||||||||||||||||||    
T  14070594 aaaagaacatcatgtgagtatgatatgagtatgtgtgagagaaagttgtcccaaagttgtcatcacaaaatagttgtacaaatatcatttctcatttatt 14070693  T
Q  187 atctctcccaatttgaaagaaactattgttcccattgacgttgtccttttcatc 240  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  14070694 atctctcccaatttgaaagaaactattgttcctattgtcgttgtccttttcatc 14070747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 2051097 - 2050927
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||| |    
T  2051097 gagtagtgatatttgtacatctatttgatgacaacattgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaagagagaggaaacg 2050998  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||| ||||||| |  ||||||| ||| |||||||||| || | ||||||| ||||||||| |||||||||||    
T  2050997 aacat-atgtgagca--tgtgagataaagttgtccaaaaattgttacaaaatggttgtacaaatatcatttctc 2050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 27005377 - 27005550
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||       ||||||||||  | |||    
T  27005377 gagtagtgatatttgtatatccaattgatgataaccttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaagtaagagagataataag 27005476  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |   |||||||| |||| | |||| ||| |||| ||||| |||||| |||||| |||||||| |||||||||||    
T  27005477 aatgtcatgtgaatatgagagagataaagttgtacaaaaattatcaaaaaataattgtacaaatatcatttctc 27005550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 14914518 - 14914372
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||       |||  ||||||||||||| ||||||||||  || ||| ||    
T  14914518 tttgatgacaactttgtttttatctcttcttattggtcaaaaacaatggagagagaaaaagta--agagaggaaaagaacatcatgtga--atatgtaag 14914423  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  14914422 agaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 183
Target Start/End: Original strand, 30574309 - 30574452
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| ||||||||||||||| |  ||||||| |||    
T  30574309 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgataagaccatcatgtgagtatgag--agagaaagttg 30574406  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    | |||||||| ||||||| | ||||||||| |||||||||||||||    
T  30574407 tacaaaagttgtcacaaattggttgtacaaatatcatttctcattt 30574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 19272002 - 19271859
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||       | |||||| |||| |||| |||||||||||||  || ||||||||    
T  19272002 tgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagaaaggataagaacatcatgtgagta--tgagagagaaa 19271905  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     ||||| ||| ||| | ||||||| ||||||||| |||||||||||    
T  19271904 gttgtctaaacgttgttacaaaatggttgtacaaatatcatttctc 19271859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 41192752 - 41192587
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| || | ||||||||||||||| ||| | ||||||||||||||||||||||       | ||||| ||||| || | ||||    
T  41192752 tgatatttgtacatccatttaattacaactttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagagtgaggataacaacatc 41192653  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||  || |||||||| ||||| |||| || |  |||||||||||||||| |||||||||||    
T  41192652 atgtgagta--tgagagagaaagttgtcaaaaaattgtagcaaaatagttgtacaaatatcatttctc 41192587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 38011008 - 38010872
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcc 140  Q
    ||||||||| || ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| |    
T  38011008 tttgtttttttctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaaattgtac 38010911  T
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||||||| |  |||||||| |||||||||||    
T  38010910 aaaagttatcacaaattgattgtacaaatatcatttctc 38010872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 3263444 - 3263580
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||||||||||| |||||||||       | ||||||||||| |||| ||||||||||||||| |  ||| ||| |||| ||    
T  3263444 ttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagaaagagagaggataagaccatcatgtgagtatgag--agaaaaaattgtaca 3263541  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||| ||||||| | ||||||||| ||||||||||||    
T  3263542 aaagttgtcacaaattggttgtacaaatatcatttctca 3263580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 9594606 - 9594478
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagtta 148  Q
    |||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||||||||     
T  9594606 tctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtacaaaagttg 9594509  T
Q  149 tcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| | ||||||||| |||||||||||    
T  9594508 tcacaaattggttgtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 22920428 - 22920565
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||         |||||||| || |||| |||||||||||||  || |||||||| |||||||    
T  22920428 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaagagagatgataagaacatcatgtgagta--tgagagagaaagttgtcca 22920525  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||| || | ||||||| ||||||||| ||| |||||||||    
T  22920526 aaatttgttacaaaatggttgtacaaatattatttctcat 22920565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 4954601 - 4954466
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||| |||||||||||||||||||       | ||||||||||| |||| |||||| |||||||| |  ||||||| |||| ||    
T  4954601 ttgtttttctctcttcttatgggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatatgagtatgag--agagaaagttgtaca 4954504  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     ||||| ||||||| || |||||||| |||||||||||    
T  4954503 taagttgtcacaaattaattgtacaaatatcatttctc 4954466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 8959295 - 8959160
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||       | ||||||||| | ||||   ||||||||||||| |  ||||| | |||||||    
T  8959295 ttgtttttctctctttttattggtcaaaaacaatggagagagaaaaagaaagagagagaataagaatctcatgtgagtatgag--agagacagttgtcca 8959198  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||| ||||||||||||| |||||||||||    
T  8959197 aaagttgtcacataatagttgtacaaatatcatttctc 8959160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 9596750 - 9596873
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||  || |||| ||| |||| ||    
T  9596750 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagta--tgagagacaaagttgtaca 9596847  T
Q  142 aaagttatcacaaaatagttgtacaa 167  Q
    |||||| ||||||| | |||||||||    
T  9596848 aaagttgtcacaaattggttgtacaa 9596873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 15622179 - 15622043
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||| ||||||  || |||||||| |||| ||    
T  15622179 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatatgagta--tgagagagaaagttgtaca 15622082  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
     ||||| ||||||| | ||| ||||| ||| ||||||||    
T  15622081 gaagttgtcacaaattggttatacaaatattatttctca 15622043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 28501752 - 28501629
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| ||||||||||  || || |||||||| |||| ||    
T  28501752 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagagagatgataagaacatcatgtga--atatgagagagaaagttgtaca 28501655  T
Q  142 aaagttatcacaaaatagttgtacaa 167  Q
    ||| || ||||||||| |||||||||    
T  28501654 aaaattgtcacaaaatggttgtacaa 28501629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 32379830 - 32380000
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattg-----gtcaaaaacaatggagagnnnnnnngtaagagagaggaaaaga 106  Q
    ||||||||||||||| |||| |||| |||||||||||| || ||| ||||||     || |||||||||||||||       | ||||||||||| || |    
T  32379830 tgatatttgtacatctatttcatgacaactttgtttttttctctttttattgtatcggttaaaaacaatggagagagaaaaaggaagagagaggataaca 32379929  T
Q  107 tcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     ||||||||||||||| |  ||||||| |||| |||||||| ||| ||| ||||||||||| || ||||||||    
T  32379930 acatcatgtgagtatgag--agagaaagttgttcaaaagttgtcataaactagttgtacaaataccatttctc 32380000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 11464059 - 11464195
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||         |||||||| || |||| |||||||||||||  || || ||||| |||| ||    
T  11464059 ttgtttttctctctttttattggtcaaaaacaatggagagagaaaaatgaagagagatgataaga-catcatgtgagta--tgagaaagaaaattgtaca 11464155  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||||||||| | ||||||||| |||||||| ||||    
T  11464156 aaagttatcacaaattggttgtacaaatatcatttttcat 11464195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 31006222 - 31006058
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| |||| ||||||||||| |||  || | |||||||||||| |||| ||||       | ||||||||||| || | ||||    
T  31006222 tgatatttgtacatccatttaatgacaactttgttttcctctattttgattggtcaaaaataatgaagag--aaaaaggaagagagaggataataacatc 31006125  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||| ||||  || |||||||| ||||| ||||||| |  ||||||||| |||||| ||||||||||||    
T  31006124 atgtaagta--tgagagagaaagttgtcaaaaagttttagcaaaatagtcgtacaaatatcatttctca 31006058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 9599662 - 9599728
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatgga 78  Q
    |||||||||||||||||||| |||| |||||| |||||||| |||||||| ||| ||||||||||||    
T  9599662 tgatatttgtacatccattttatgacaactttatttttctctcttcttatcggtaaaaaacaatgga 9599728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 17489483 - 17489351
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||        |||||||||  | ||||   |||||||||||  || |||||||| ||||  |    
T  17489483 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaattaagagagataataagaatgtcatgtgagta--tgagagagaaaattgtgta 17489386  T
Q  142 aaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||| |||||| ||||||||||||||| ||||||||    
T  17489385 aaaattatcaaaaaatagttgtacaaatatcattt 17489351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 33823630 - 33823709
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtat 121  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||    
T  33823630 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataagaccatcatgtgagtat 33823709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 34381151 - 34381011
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||| ||||||||| ||| | ||||||||||||||||||||||       | ||||||||| | ||||  || ||||||||||| |  ||||||| |||    
T  34381151 aacttcgtttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagagaataagagaataatgtgagtatgag--agagaaagttg 34381054  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    || ||||||| ||||||| | ||||||||| ||||||||||||    
T  34381053 tcaaaaagttgtcacaaagtggttgtacaaatatcatttctca 34381011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 12512928 - 12512852
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgag 118  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||    
T  12512928 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgag 12512852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 36548303 - 36548451
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||| |||||||||||  || |||||| |  ||||||||||||||       | ||||||||||| || | ||||||||||||||| |  ||    
T  36548303 tttgatgacaaccttgtttttctctatttttattgattgaaaacaatggagagagaaaaaggaagagagaggataatagcatcatgtgagtatgag--ag 36548400  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| |||||  |||||| ||||||||| ||| ||||| |||||||||||    
T  36548401 agaaagttgtcagaaagttgtcacaaaatggttatacaaatatcatttctc 36548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 32634851 - 32634708
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    |||||| ||||||||||||  ||||||||||| ||||||| |||||||         || |||||||| |||| ||||||||||||||| |  |||||||    
T  32634851 tgataattttgtttttctcttttcttattggtaaaaaacattggagagagaaaaatgaaaagagaggataagaccatcatgtgagtatgag--agagaaa 32634754  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||| |||||||| ||||| | |  |||||||| |||||||||||    
T  32634753 gttgtacaaaagttgtcacagattgattgtacaaatatcatttctc 32634708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 6538922 - 6538866
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||||| ||||| |||| ||||||||||||| |||||||| |||||||||||||||    
T  6538922 agagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcatttctcattt 6538866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 39788710 - 39788778
Alignment:
Q  110 tcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||||||||| |  ||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||    
T  39788710 tcatgtgagtatgag--agagaaagttgtccaaaagttgtcacataatggttgtacaaatatcatttctca 39788778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 40223803 - 40223865
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttattat 188  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| ||| ||||||||||||||||    
T  40223803 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatataatttctcatttattat 40223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 582885 - 582938
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  |||||||||||||||||||||||| || |||||||||||    
T  582885 gagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcatttctc 582938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 3154661 - 3154710
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatt 175  Q
    |||||||| |||| |||||||||||| ||||||||||||||| |||||||    
T  3154661 gagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 9599730 - 9599800
Alignment:
Q  108 catcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||||||||||| |  ||||||| |||| |||||||| ||||||| | ||||||||| ||||||||||||    
T  9599730 catcatgtgagtatgag--agagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctca 9599800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 19437310 - 19437257
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||| ||||||||||||| |||||||||||||||||||||    
T  19437310 gagagaaagttgtttaaaggttatcacaaaatggttgtacaagtatcatttctc 19437257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 42699110 - 42699053
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| || || ||||||| ||||||||| ||||||||| |||||||||||||||    
T  42699110 gagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcatttctcattt 42699053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 4292931 - 4292879
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| |||||||||||||||  |||||||||||||||||||| ||||||    
T  4292931 tttgttgacaactttgtttttctctattcttattggtcaaaaacaacggagag 4292879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 7080646 - 7080610
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||||||||||||||||||||||||    
T  7080646 tttttctctcttcttattggtcaaaaacaatggagag 7080610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 14323907 - 14323943
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| ||||||||||||||||||||||||    
T  14323907 tttttctcactttttattggtcaaaaacaatggagag 14323943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 3518322 - 3518279
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||    
T  3518322 aactttgttgttctctcttctcattggtcaaaaacaatggagag 3518279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 7077262 - 7077413
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagagg---aaaagatcatcatgtgagtatgtgt 125  Q
    |||| ||| ||||||||||||||| ||| | |||||||||||| |||||||||       | ||||| ||||   | || |||||||||||||||  ||     
T  7077262 tttggtgacaactttgtttttctctcttttgattggtcaaaaataatggagagagaaaaaggaagagtgaggataacaacatcatcatgtgagta--tga 7077359  T
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||| || || ||||||| | ||||||| ||||||||| |||||||||||    
T  7077360 gaaagaaagttatcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 7077413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 10469879 - 10469922
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||    
T  10469879 aactttgttgttctctcttctcattggtcaaaaacaatggagag 10469922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 10522910 - 10522871
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  10522910 ttgtttttctctcttcttattggtcaaaaataatggagag 10522871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 12401324 - 12401289
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggaga 80  Q
    |||||||| |||||||||||||||||||||||||||    
T  12401324 tttttctctcttcttattggtcaaaaacaatggaga 12401289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 16553671 - 16553600
Alignment:
Q  10 agtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||||  |||| |||| || ||||||||| || ||| | |||| |||||||||||||||||    
T  16553671 agtgatatttgtacatttatttaatgacaattttgtttttatctcttttgattgatcaaaaacaatggagag 16553600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 19844341 - 19844380
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  19844341 caaaagttatcaaaaaatagttgtacaaatatcatttctc 19844380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 39595325 - 39595270
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||||    
T  39595325 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcat 39595270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 43152992 - 43153035
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||    
T  43152992 aactttgttgttctctcttctcattggtcaaaaacaatggagag 43153035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 372608 - 372646
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  372608 gagtagtgatatttgtacatccaattgatgataattttg 372646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 8959343 - 8959305
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  8959343 gagtagtgatatttgtacatccaattgatgacaactttg 8959305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 16143427 - 16143381
Alignment:
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcatttattat 188  Q
    |||||| ||||||||| ||||||||| |||||||||||||| |||||    
T  16143427 aaagttgtcacaaaatggttgtacaaatatcatttctcattaattat 16143381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 17489531 - 17489493
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  17489531 gagtagtgatatttgtacatccaattgatgacaactttg 17489493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 27440532 - 27440478
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| |||| |||||||| |||||||||  |||||||| ||||||||||||    
T  27440532 gagagaaaattgttcaaaagttgtcacaaaatgattgtacaaatatcatttctca 27440478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 35814503 - 35814453
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| |||| | |||||||||||||||| ||||||||| |||||||||||    
T  35814503 agaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctc 35814453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 36581483 - 36581537
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| ||||| |||| |||||||||| | ||||||||| ||||||||||||    
T  36581483 gagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctca 36581537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 39788608 - 39788646
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  39788608 gagtagtgatatttgtacaaccaattgatgataactttg 39788646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 40039329 - 40039283
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctcatttatt 186  Q
    ||||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  40039329 caaaaattatcaaaaaatagttgttcaaatatcatttctcatttatt 40039283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 125130 - 125085
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctcatttatt 186  Q
    ||||||| ||||||| ||||||||||| ||||||||||| ||||||    
T  125130 aaaagttgtcacaaagtagttgtacaaatatcatttctcttttatt 125085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 7144630 - 7144577
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||||||| ||||| ||||||||| |||||||||||    
T  7144630 gagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttctc 7144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 21353553 - 21353586
Alignment:
Q  146 ttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||||| ||||||||||||||||||||    
T  21353553 ttatcacaaaataattgtacaagtatcatttctc 21353586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 28904044 - 28903987
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| ||||| ||||||| ||||||  | ||||||||| |||||||||||||||    
T  28904044 gagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctcattt 28903987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 28940439 - 28940382
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| ||||| ||||||| ||||||  | ||||||||| |||||||||||||||    
T  28940439 gagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctcattt 28940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 29803278 - 29803225
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||| ||| ||||||||||||||| |||||||||||    
T  29803278 gagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 29803225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 41175723 - 41175780
Alignment:
Q  126 gagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||| ||||| ||||||||||| |||||||| ||| ||| ||||||||||||||    
T  41175723 gagagaaagttgtcacaaaagttatcccaaaatagatgttcaaatatcatttctcatt 41175780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 3722999 - 3723051
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||  ||||||| ||| ||||||||| ||||||||||||||    
T  3722999 tttgatgacaactttcattttctctctttttattggtccaaaacaatggagag 3723051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 6420776 - 6420740
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||  |||||||||||||||||||||||||||    
T  6420776 tttttctctgttcttattggtcaaaaacaatggagag 6420740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 12417774 - 12417722
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| |||||||| |||||| |||||| ||||| |||||||||||||||    
T  12417774 tttggtgacaactttgtgtttctctcttctttttggttaaaaacaatggagag 12417722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 34428204 - 34428160
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  34428204 ttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 34428160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 34952328 - 34952380
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||  ||||||| ||||||||||||| |||||||| |||||    
T  34952328 tttgatgacaacttttattttctctcttcttattggtccaaaacaatagagag 34952380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 36572735 - 36572691
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||| ||||||||||||| ||||| |||||||||||    
T  36572735 ttgtcaaaaagttgtcacaaaatagttatacaaatatcatttctc 36572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 38500995 - 38500943
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| |||| || ||||||||| ||||||||| |||||||||||    
T  38500995 agagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 38500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 41210453 - 41210489
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| |||||||||||||||||||||| |||||    
T  41210453 tttttctctcttcttattggtcaaaaacaatagagag 41210489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 36909766 - 36909914
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||  ||||||    
T  36909766 tttgatgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaagagagaggaaaagaaaatcatgtgagta--tgtgag 36909863  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  36909864 agaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 29893746 - 29893610
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcc 140  Q
    |||||||||||| |||||||||| |||||||||||||||||       | ||||||||||| |||| ||||||||||||||  |  ||||||| |||| |    
T  29893746 tttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtataag--agagaaagttgtac 29893649  T
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  29893648 aaaagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 5954385 - 5954554
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||||||||| ||||||| || ||||||| |||| |||||||||||||||||| |||||||||       | ||||||||  | |||    
T  5954385 gagtagtgatatttgtacatccaattgatgacaattttgtttctctctcttcttattggtcaaaaataatggagagagaaaaaggaagagaga--ataag 5954482  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |   ||||||||  ||  | |||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||    
T  5954483 aatctcatgtga--ataggagagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttctc 5954554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 6885049 - 6884910
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| ||||||||| |||||||||||||||||          ||||||||||| |||| ||||||||||||||| |  ||||||| |||    
T  6885049 aactttgtttttctctcttcttattagtcaaaaacaatggagatagaaaaaagaagagagaggataagaccatcatgtgagtatgag--agagaaagttg 6884952  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |  ||||||||||||||| ||||||||||| |||||||||||    
T  6884951 tataaaagttatcacaaattagttgtacaaatatcatttctc 6884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 36383597 - 36383462
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| ||||||||||||||| |  ||||||| |||| ||    
T  36383597 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcatgtgagtatgag--agagaaagttgtaca 36383500  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| |||||||||  |||||||| |||||||||||    
T  36383499 aaagttgtcacaaaatctttgtacaaatatcatttctc 36383462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 44484588 - 44484727
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| |||||||||||||  || |||||||| |||    
T  44484588 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcatgtgagta--tgagagagaaagttg 44484685  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||||| || | ||||||| ||||||||| |||||||||||    
T  44484686 tacaaaaattgttacaaaatggttgtacaaatatcatttctc 44484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 6851565 - 6851730
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||| | |||||||||||||||| |||||         ||||||||| | || | ||||    
T  6851565 tgatatttgtacatccatttaatgacaactttgtttttctctcttttgattggtcaaaaacaattgagagagaaaaatgaagagagagaataacaacatc 6851664  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||  || |||||||| ||||| ||||||| |  |||||||| ||||||| |||||||||||    
T  6851665 atgtgagta--tgagagagaaagttgtcaaaaagttgtagcaaaatagatgtacaaatatcatttctc 6851730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3196023 - 3196158
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||||||||||| |||||||||       | |||||||| || |||||||||||||||||||| |  ||||||| |||| ||    
T  3196023 ttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagatgataagatcatcatgtgagtatgag--agagaaagttgtaca 3196120  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| |  |||||||| |||||||||||    
T  3196121 aaagttgtcacaaattgattgtacaaatatcatttctc 3196158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 30973914 - 30974061
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||       | |||||||| |||||||  || |||||||||    ||||    
T  30973914 tttgatgataactttgtttttctcactttttattggtcaaaaacaatggagagagaaaaaggaagagagatgaaaagaagataatgtgagta----tgag 30974009  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||| | ||||| ||||||| ||| |||||  ||||| || ||||||||||||    
T  30974010 agagagttgtcaaaaagttgtcataaaatgattgtaaaaatatcatttctca 30974061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 27540180 - 27540015
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| |||||||||||||||| |||  || | |||||||||||||| |||||||       | ||||||||||| || | ||||    
T  27540180 tgatatttgtacatccatttaatgataactttgttttcctcttttttgattggtcaaaaacattggagagagaaaaaggaagagagaggataataacatc 27540081  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||  || |||| ||| ||||| ||||||| |  |||||| ||||||||| ||| |||||||    
T  27540080 atgtgagta--tgagagaaaaagttgtcaaaaagttgtagcaaaattgttgtacaaatatgatttctc 27540015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 14954499 - 14954670
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    |||||||||||| |||||||| ||||||||| ||| |||||||||||  || | |||||| |||||||||||||||       | ||||||||| |||||    
T  14954499 gagtagtgatatatgtacatcaatttgatgacaaccttgtttttctcttttttaattggtaaaaaacaatggagagagaaaaaggaagagagagaaaaag 14954598  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |  || ||||||  || || |||||||| |||| |||||||| |||||||||   ||||||| |||||||||||    
T  14954599 aatattatgtga--atatgagagagaaagttgttcaaaagttgtcacaaaatgtatgtacaaatatcatttctc 14954670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 34144488 - 34144622
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||| ||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  34144488 ttgtttttctctcttcttattggtcaaaa-caatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtaca 34144584  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| || ||||||| | ||||||||| |||||||||||    
T  34144585 aaaattgtcacaaattggttgtacaaatatcatttctc 34144622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 23048019 - 23048165
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||| ||||||| |||| | |||||||||||  || |||||||| || | ||    
T  23048019 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagggagaggataagaccgtcatgtgagta--tgagagagaaagttataca 23048116  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcatttattatct 190  Q
    ||| ||||| |||| |  |||||||| |||||||||||||||| |||||    
T  23048117 aaaattatctcaaattgattgtacaaatatcatttctcatttactatct 23048165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 10688085 - 10687941
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaa 132  Q
    |||| ||| ||||||||||| ||||||||| ||||||||||||||||||       | |||||||| || |||| |||||||||||||  || |||||||    
T  10688085 atgaaaaccttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaagagagatgataagaccatcatgtgagta--tgagagagaa 10687988  T
Q  133 atttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||||  ||||||| ||||||| |  |||||||| |||||||||||    
T  10687987 agttgtataaaagttgtcacaaattgtttgtacaaatatcatttctc 10687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 30487388 - 30487503
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||         ||||||||||| |||| |||||||||||||  || |||| ||| |||| ||    
T  30487388 ttgtttttctctcttcttattggtcaaaaacaatggagaga--------aagagagaggataagaccatcatgtgagta--tgagagataaagttgtaca 30487477  T
Q  142 aaagttatcacaaaatagttgtacaa 167  Q
    |||||| ||||||| |||||||||||    
T  30487478 aaagttgtcacaaattagttgtacaa 30487503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 5962786 - 5962734
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5962786 tttggtgataactttgtttttctctcttcttattggtcaaaaacaatggagag 5962734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 19631553 - 19631389
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    ||||||||  |||||||||| | || ||||||||||||||| |||||||||||| |||||||||||||||       | |||||| || | || |  ||     
T  19631553 tgatattttgacatccatttaaggacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaagagaaagaataataatatt 19631454  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
     |||||||||| | |||||||  ||||| |||| || | ||||||||||||||||| ||||||||    
T  19631453 ttgtgagtatgagagagagaatgttgtcaaaaaattgttacaaaatagttgtacaaatatcattt 19631389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 19828454 - 19828290
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    ||||||||  |||||||||| | || ||||||||||||||| |||||||||||| |||||||||||||||       | |||||| || | || |  ||     
T  19828454 tgatattttgacatccatttaaggacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaagagaaagaataataatatt 19828355  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
     |||||||||| | |||||||  ||||| |||| || | ||||||||||||||||| ||||||||    
T  19828354 ttgtgagtatgagagagagaatgttgtcaaaaaattgttacaaaatagttgtacaaatatcattt 19828290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 29582278 - 29582349
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaat 75  Q
    ||||||| || |||||||||| ||||||||||| |||||| |||||||| |||||||||||| |||||||||    
T  29582278 atgagtaatggtatttgtacaaccatttgatgacaactttctttttctctcttcttattggtaaaaaacaat 29582349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 37966491 - 37966411
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatg 122  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||||    
T  37966491 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagagagaggataagaccatcatgtgagtatg 37966411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 3091873 - 3091741
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| | ||||||||||||||||||||||       | ||||||||  | || |  || ||||||||||| |  ||||||| ||||| ||||    
T  3091873 tttttctctcttttcattggtcaaaaacaatggagagaaaaaaaggaagagagataataaaagaataatgtgagtatgag--agagaaaattgtcaaaaa 3091776  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||||||||||||||| |||||||||||    
T  3091775 gttatcacaaaatagttgtacaaatatcatttctc 3091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 178
Target Start/End: Complemental strand, 20974521 - 20974354
Alignment:
Q  12 tgatatttgtacatcca--tttgatgataactttgtttttctcacttcttattggtca-aaaacaatggagagnnnnnnngtaagagagaggaaaagatc 108  Q
    ||||||||||| |||||  ||| |||| || |||||||||||| |||||||||||||| |||| |||||||||       | |||||| |||| |||| |    
T  20974521 tgatatttgtatatccaactttaatgacaattttgtttttctctcttcttattggtcaaaaaaaaatggagagagaaaaaggaagagaaaggataagacc 20974422  T
Q  109 atcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
     |||||| ||||  || |||||||| |||| |||||||| ||||||| |||||||| || ||||||||||    
T  20974421 ttcatgtcagta--tgagagagaaagttgtacaaaagttgtcacaaattagttgtaaaaatatcatttct 20974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 29611825 - 29611943
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaa 103  Q
    ||||||| || |||||||||| ||||||||||| |||||| |||||||| ||||| ||| || ||||||||| || ||       | ||||||||||| |    
T  29611825 atgagtaatggtatttgtacaaccatttgatgacaactttctttttctctcttctcatttgtaaaaaacaatagatagagaaaaaggaagagagaggata 29611924  T
Q  104 agatcatcatgtgagtatg 122  Q
    ||| |||||||||||||||    
T  29611925 agaacatcatgtgagtatg 29611943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 28165257 - 28165128
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagtta 148  Q
    |||| ||| |||||||||||||| |||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| |||||||     
T  28165257 tctctctttttattggtcaaaaataatggagagagaaaaaggaagagagagattaagaatataatgtgagtatgag--agagaaaattgtctaaaagttg 28165160  T
Q  149 tcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||||| ||||||||||||||||||||||    
T  28165159 tcacaaaatggttgtacaagtatcatttctca 28165128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 5067580 - 5067717
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatg---tgtgagagaaatttgtcca 141  Q
    |||||||||||| | ||||||||||||||||||||||       | ||||||||| | || | ||| |||||||||||   || |||||||| || || |    
T  5067580 tttttctcacttttcattggtcaaaaacaatggagagagaaaaaggaagagagagaataaaaacataatgtgagtatgagatgagagagaaagttatcaa 5067679  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| ||| ||||||| |||||||||||    
T  5067680 aaagttgtcacaaagtagatgtacaaatatcatttctc 5067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 26321621 - 26321767
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| |||||||||| |||||||| ||| | |||||| ||||||||| |||||       | ||||||||| | ||||| || |||||||||||    ||    
T  26321621 tttggtgataacttt-tttttctctcttttcattggttaaaaacaattgagagagaaaaaggaagagagagaataagatgataatgtgagtatgat--ag 26321717  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    || || ||||| ||||||||||||||||| ||||||||| ||||||||||    
T  26321718 aggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 44085355 - 44085277
Alignment:
Q  96 agaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||||| |||||||||||||  ||||| ||||| |||||||||| || |||||||||| ||||| || ||||||||    
T  44085355 agaggaaaagaacatcatgtgagta--tgtgatagaaaattgtccaaaaattgtcacaaaataattgtataaatatcattt 44085277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 10550382 - 10550475
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatg 122  Q
    |||| ||| |||||||||||||||  || ||||||||||||||||||||||||       | ||||||||||| |||| |||||| ||||||||    
T  10550382 tttgttgacaactttgtttttctctatttttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagagcatcatatgagtatg 10550475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 15226984 - 15227032
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  15226984 atgataactttgtttttatttcttcttattggtcaaaaacaatggagag 15227032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 27307217 - 27307302
Alignment:
Q  92 agagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||| |||| ||||||||||||||| |  ||||||| |||| |||||||| ||||||| |  |||||||| |||||||||||    
T  27307217 agagagaggataagaccatcatgtgagtatgag--agagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctc 27307302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 38246687 - 38246821
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| |||||||||||||||||||||||||| |       | ||||||||||| |||| |||||| ||||||  || |||||||| || | ||    
T  38246687 ttgtttctctctcttcttattggtcaaaaacaatggagggagaaaaaggaagagagaggataagaccatcatatgagta--tgagagagaaagttctaca 38246784  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    ||| || ||||||| |  |||||||| ||||||||||    
T  38246785 aaaattgtcacaaattgattgtacaaatatcatttct 38246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 4432466 - 4432423
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    
T  4432466 aactttgtttttctctcttcttattggtcaaaaacaatagagag 4432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 30220841 - 30220884
Alignment:
Q  139 ccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  30220841 ccaaaagttatcacagaatagttgtacaaatatcatttctcatt 30220884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 3299048 - 3299176
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagtta 148  Q
    |||| |||||||||||| |||||||||||||||       ||||||||||||| ||   ||||||||||||||  |  | ||||| ||||  |||||||     
T  3299048 tctctcttcttattggttaaaaacaatggagagagaaaaagtaagagagaggataacgacatcatgtgagtataag--aaagaaagttgtttaaaagttg 3299145  T
Q  149 tcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||| ||||||||| |||||||||||    
T  3299146 tcataaaatggttgtacaaatatcatttctc 3299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 8352967 - 8352835
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||||| |||| ||||||||| |||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| ||||    
T  8352967 tttttctctcttctcattgatcaaaaacactggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaaattgtctaaaa 8352870  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| | ||||||||||||||| |||||||||||    
T  8352869 gttattaaaaaatagttgtacaaatatcatttctc 8352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 29168857 - 29168725
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| |||||||||||| |  ||||||||||||       ||||||||||  | ||||   ||||||||||||| |  ||||||| |||| |||||    
T  29168857 tttttctctcttcttattggtaattaacaatggagagagaaaaagtaagagagataataagaatgtcatgtgagtatgag--agagaaagttgtgcaaaa 29168760  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||| ||||| ||||||||| |||||||||||    
T  29168759 gttgtcaaaaaatggttgtacaaatatcatttctc 29168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 9695065 - 9695135
Alignment:
Q  110 tcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    ||||||||||||| |  ||||||| |||||||||| ||||| || ||| ||||||||| ||||||||||||||    
T  9695065 tcatgtgagtatgag--agagaaagttgtccaaaaattatctcataatggttgtacaaatatcatttctcatt 9695135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 10288203 - 10288150
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||| ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  10288203 gagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctc 10288150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 13553200 - 13553147
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||||||||| |||||||||| | ||||||||| |||||||||||    
T  13553200 gagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 13553147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 14255359 - 14255298
Alignment:
Q  123 tgtgagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| ||| |||||||||||    
T  14255359 tgtgagagaaaattgtcacaaaagttgtcataaaatagttgtacaaatattatttctcattt 14255298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 14891112 - 14891149
Alignment:
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14891112 aaagttatcacaaaatagttgtacaaatatcatttctc 14891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 30856860 - 30856803
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||||||    
T  30856860 gagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctcattt 30856803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 35171211 - 35171297
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| || |||| ||||||||||||||| |  ||||||| |||| | ||| || ||||||||| ||||||||| |||||||||||    
T  35171211 aagagagatgataagaccatcatgtgagtatgag--agagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttctc 35171297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 42678730 - 42678601
Alignment:
Q  3 tatgagtagtgatatttgtacatccatttgatgataactttg----------tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaa 92  Q
    ||||||||||||||| ||||||||||||| |||| |||||||          | |||||| ||| ||||||||||| ||||||||||||       | ||    
T  42678730 tatgagtagtgatatatgtacatccatttcatgacaactttgacgagaaccttgtttctctctttttattggtcaataacaatggagagagaacaagaaa 42678631  T
Q  93 gagagaggaaaagatcatcatgtgagtatg 122  Q
    ||||||| |||||| |||||||||||||||    
T  42678630 gagagagaaaaagaacatcatgtgagtatg 42678601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 44018185 - 44018319
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||||||||  |||||||||||||||| ||||| ||||       | | |||| || |||||| ||||||||||||||| |  ||| | |||||||||    
T  44018185 ttgtttttctcttttcttattggtcaaaa-caatgaagagagaaaagggaggagaaagaaaaagaacatcatgtgagtatgag--agatatatttgtcca 44018281  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||||| |||||| || |||||| ||||    
T  44018282 aaagttgtcacaaaatggttgtaaaaatatcatctctc 44018319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 3039902 - 3039858
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||    
T  3039902 aaaagttatcacaaaatagttgtacgaatatcatttctcaattat 3039858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 5095980 - 5096028
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||||| ||||||||||||  |||||||| |||||||||||||||    
T  5095980 ttgtccaaaaattatcacaaaatgattgtacaaatatcatttctcattt 5096028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 10466115 - 10466163
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| |||||||||||||||  |||||||| ||||||||||||||||||    
T  10466115 atgacaactttgtttttctcttttcttattagtcaaaaacaatggagag 10466163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 27307184 - 27307220
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27307184 tttttctctcttcttattggtcaaaaacaatggagag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 29871278 - 29871330
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| |||||||||| |||| |||||||||||| |||||||||||||||    
T  29871278 tttggtgacaactttgtttctctctcttcttattggttaaaaacaatggagag 29871330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 33857365 - 33857313
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| |||||| |||||||  ||||||||||||||||||||||||||||    
T  33857365 tttggtgacaactttatttttctgtcttcttattggtcaaaaacaatggagag 33857313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 38572087 - 38572035
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||||||||||| |||||||||||||||| |||||||||||    
T  38572087 tttggtgacaaccttgtttttctctcttcttattggtcaaagacaatggagag 38572035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 39247490 - 39247534
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||    
T  39247490 ttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctc 39247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 42141580 - 42141665
Alignment:
Q  92 agagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| || |||| ||||||||||||||| |  ||||||| ||||||||||||| | | ||||| ||||||||  |||||||||||    
T  42141580 agagagaagataagagcatcatgtgagtatgag--agagaaagttgtccaaaagttgtgaaaaaatggttgtacatatatcatttctc 42141665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 43936383 - 43936435
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| |||||| ||||||||||||  || ||||||||||||||||||||||||    
T  43936383 tttggtgataattttgtttttctctttttttattggtcaaaaacaatggagag 43936435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 8757679 - 8757640
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  8757679 ttgttgttctctcttcttattggtcaaaaacaatggagag 8757640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 26321892 - 26321935
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||    
T  26321892 ttgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 35518414 - 35518371
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||    
T  35518414 aactttgttgttctctcttcttattggtcaaaaacaatagagag 35518371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 43621966 - 43622021
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||| |||| |||||||| ||| ||||||||||||||| ||||||| |||||    
T  43621966 gagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcattactcat 43622021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 6365318 - 6365186
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| ||||||||||||||||||| ||||       | ||||||||  | ||||  || |||||| ||||||  ||||||| ||||| ||||    
T  6365318 tttttctctctttttattggtcaaaaacaatgaagagagaaaaaggaagagagaaaataagagtataatgtgaatatgtg--agagaaaattgtcaaaaa 6365221  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
     || ||||||| | ||||||||| |||||||||||    
T  6365220 attgtcacaaagtggttgtacaaatatcatttctc 6365186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 11229260 - 11229392
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||||||| | ||||||||||||||||||||||       | ||||||| | | || | ||| |||||||||  || |||||||| ||||| | ||    
T  11229260 tttttctcacttttcattggtcaaaaacaatggagagagaaaaaggaagagagggaataaaaacataatgtgagta--tgagagagaaagttgtcaagaa 11229357  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||| | | ||||||| |||||||||||    
T  11229358 gttgtcacaaagtggatgtacaaatatcatttctc 11229392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 12192130 - 12192092
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  12192130 gagtagtgatatttgtacatccaattgataataactttg 12192092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 23391201 - 23391159
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggaga 80  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||    
T  23391201 aactttgtttttctctcttcttattgatcaaaaataatggaga 23391159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 25994274 - 25994205
Alignment:
Q  3 tatgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaaca 73  Q
    ||||||||||||||| |||||| | ||||| ||| ||||||  ||||||| ||||||||||||| ||||||    
T  25994274 tatgagtagtgatatatgtacaactatttg-tgacaactttcattttctctcttcttattggtccaaaaca 25994205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 14140355 - 14140408
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| | ||||| ||||||| ||||||| ||||||||||| |||||||||||    
T  14140355 gagagatagttgtcaaaaagttgtcacaaattagttgtacaaatatcatttctc 14140408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 20247815 - 20247938
Alignment:
Q  54 cttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcaca 153  Q
    |||||||||||||||| |||||||||||       ||||||||||| | || | ||| |||||||||  || |||||||| |||| |||||||  |  ||    
T  20247815 cttcttattggtcaaacacaatggagagagaaaaagtaagagagagaataaaaacataatgtgagta--tgagagagaaagttgtacaaaagtcgtacca 20247912  T
Q  154 aaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||| |||||||    
T  20247913 aaatagttatacaaatattatttctc 20247938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 22303247 - 22303202
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||| |||||||| ||| ||||||||||||||| ||||||||||||    
T  22303247 ttgttcaaaagttgtcaaaaaatagttgtacaaatatcatttctca 22303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 8329895 - 8329951
Alignment:
Q  125 tgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||| | |||||||||| |||||||||||||||| || || |||||||| ||||    
T  8329895 tgagagagaattgtccaaaaattatcacaaaatagttatataaatatcatttttcat 8329951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 8805297 - 8805233
Alignment:
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    |||||| ||| || || ||||| |||||||||| |||||| ||||||||||||||  ||||||||    
T  8805297 atgtgaatatatgagatagaaagttgtccaaaaattatcataaaatagttgtacatatatcattt 8805233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 10550347 - 10550387
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtt 46  Q
    ||||| ||||||||| ||||||||||||||| |||||||||    
T  10550347 gagtaatgatatttggacatccatttgatgacaactttgtt 10550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 12600101 - 12600045
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||| |||||  ||| |||||||||| | ||||||||| ||||||||||||||    
T  12600101 gagagaaagttgtcacaaaattatcacaaagtggttgtacaaatatcatttctcatt 12600045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 23358518 - 23358554
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  23358518 tttttctctcttctcattggtcaaaaacaatggagag 23358554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 30413655 - 30413707
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||||||| ||||||| ||| | ||||||||||||||||||||||    
T  30413655 tttggtgacaactttgcttttctctcttttgattggtcaaaaacaatggagag 30413707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 36435737 - 36435681
Alignment:
Q  123 tgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||  ||||||| ||||||| | ||||||||| |||||||||||    
T  36435737 tgtgagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 36582433 - 36582401
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||||| |||||||    
T  36582433 tgatatttgtacatccatttgatgacaactttg 36582401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 37631306 - 37631342
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  37631306 tttttctctcttctcattggtcaaaaacaatggagag 37631342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 42141498 - 42141538
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtt 46  Q
    ||||| ||||||||| ||||| |||||||||||||||||||    
T  42141498 gagtaatgatatttggacatctatttgatgataactttgtt 42141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 43621887 - 43621923
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| |||||||||| |||||||||||||||||    
T  43621887 tttttctctcttcttattgatcaaaaacaatggagag 43621923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 43725337 - 43725301
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  43725337 tttttctcacttttcattggtcaaaaacaatggagag 43725301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 105)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 13267401 - 13267549
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||  ||||||    
T  13267401 tttgatgaaaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaagagagaggaaaagaaaatcatgtgagta--tgtgag 13267498  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| || ||||||| || ||||||||| ||||||||| |||||||||||    
T  13267499 agaaagttttccaaaatttgtcacaaaatggttgtacaaatatcatttctc 13267549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 40721864 - 40722035
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    |||||||||||| |||||||||||||||||| ||  |||||||||||  || |||||||||||||| |||||||||       | |||||||||||||||    
T  40721864 gagtagtgatatatgtacatccatttgatgacaatattgtttttctctttttttattggtcaaaaataatggagagagaaaaaggaagagagaggaaaag 40721963  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||||||||||  || |||||||| |||||||||| |||| | ||||| | ||||||| |||||||||||    
T  40721964 aacatcatgtgagta--tgagagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 29949571 - 29949743
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaa 103  Q
    ||||||| || |||||||||| ||||||||||| |||||| |||||||| |||||||||||| ||||||||| || ||       | ||||||||||| |    
T  29949571 atgagtaatggtatttgtacaaccatttgatgacaactttctttttctctcttcttattggtaaaaaacaatagatagagaaaaaggaagagagaggata 29949670  T
Q  104 agatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttc 177  Q
    ||| ||||||||||||||| | |||||| | |||| |||||||| ||||||||| ||| ||||| |||||||||    
T  29949671 agaacatcatgtgagtatgagagagagagagttgt-caaaagttttcacaaaatggttatacaaatatcatttc 29949743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 47106046 - 47105911
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||| ||||| |  ||||||| |||| ||    
T  47106046 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataagaccatcatgtgtgtatgag--agagaaagttgtaca 47105949  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||| || |||||||| |||||||||||    
T  47105948 aaagttatcacaaattaattgtacaaatatcatttctc 47105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 179
Target Start/End: Original strand, 55267929 - 55268072
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||       | ||||||||||| ||||||||||||||||||  || |||| |||    
T  55267929 tgataaccttgtttttctctcttcttattggtcaaaagcaatggagagagaaaaaggaagagagaggataagatcatcatgtgagta--tgagagataaa 55268026  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||| |||||||| ||||||| | ||||||||| |||||||||||    
T  55268027 gttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 55268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 5208263 - 5208398
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| || ||||| ||||||||||| |  ||||||| |||| ||    
T  5208263 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataaaatcataatgtgagtatgag--agagaaagttgtaca 5208360  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  5208361 aaagttgtcacaaattggttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 27001345 - 27001480
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  27001345 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtaca 27001442  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     ||||| ||||||| | ||||||||| |||||||||||    
T  27001443 gaagttgtcacaaattggttgtacaaatatcatttctc 27001480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 51377229 - 51377364
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||  ||    
T  51377229 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttggaca 51377326  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  51377327 aaagttgtcacaaattggttgtacaaatatcatttctc 51377364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 7037420 - 7037557
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| ||||| |||||||  || |||||||| |||| ||    
T  7037420 ttgtttttctcccttcttattggtcaaaaacaatggagagagaaaaaggaagagagaagataagaccatcacgtgagta--tgagagagaaaattgtaca 7037517  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||| ||||||| | ||||||||| |||||||||||||    
T  7037518 aaagttgtcacaaattggttgtacaaatatcatttctcat 7037557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 924961 - 925130
Alignment:
Q  5 tgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaa 104  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||||  ||| |||||| |||||||||||||||||       | || |||||||| ||    
T  924961 tgagtagtgatatttgtacattcaattgatgacaaccttgtttttctatctttttattgatcaaaaacaatggagagagaaaaaggaatagagaggataa 925060  T
Q  105 gatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
     |   |||||||||||  || |||||||| ||||| ||||||| ||||||||| |||||| || ||||||||    
T  925061 aaatgtcatgtgagta--tgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcattt 925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 31049053 - 31048920
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||| | |||| |||||||||||||||||       | ||||||||||| || |  |||    
T  31049053 tgatatttgtacatccatttaatgacaactttgtttttctctcttttgattgatcaaaaacaatggagagagaaaaagaaagagagaggataataatatc 31048954  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagtt 147  Q
    |||||||||  || |||||||| ||||| |||||||    
T  31048953 atgtgagta--tgagagagaaagttgtcaaaaagtt 31048920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 32901464 - 32901327
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||       ||||||||||  | ||||   |||||||||||||    ||||||| |||| ||    
T  32901464 ttgtttttctctctttttattggtcaaaaacaatggagagagaaaaagtaagagagataataagaatgtcatgtgagtatgaa--agagaaagttgtgca 32901367  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||| |||||| ||||||||||||||| |||||||||||||    
T  32901366 aaaattatcaaaaaatagttgtacaaatatcatttctcat 32901327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 45779197 - 45779362
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    ||||||||||||||| |||| |||| || ||||||| |||| ||| | ||||||||||||||||||||||       | ||||||||| | || | ||||    
T  45779197 tgatatttgtacatctatttaatgacaattttgtttctctctcttttgattggtcaaaaacaatggagagagaaaaagaaagagagagaataataacatc 45779296  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||  || || ||||| ||||| |||| |||| |||||||||||||| || |||||||||||    
T  45779297 atatgagta--tgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcatttctc 45779362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 3223121 - 3222989
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||||||||||||||||||||||||||||       | |||||||| |||||   |||||||||||||  || |||||||| |||| |||||    
T  3223121 tttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgaaaaagccatcatgtgagta--tgagagagaaagttgtacaaaa 3223024  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||| |  |||||||| |||||||||||    
T  3223023 gttgtcacaaattgattgtacaaatatcatttctc 3222989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 31221548 - 31221413
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||| |||| ||||  || |||||||| ||||  |    
T  31221548 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccataatgtaagta--tgagagagaaagttgtata 31221451  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| |  |||||||| |||||||||||    
T  31221450 aaagttgtcacaaattgattgtacaaatatcatttctc 31221413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 1031887 - 1031754
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||||||| | ||||||||||||||||||||||       | ||||||||| | || | ||| ||||||||||| |  ||||||| ||||| | ||    
T  1031887 tttttctcacttttcattggtcaaaaacaatggagagagaaaaagaaagagagagaataaaaacataatgtgagtatgag--agagaaagttgtcaagaa 1031790  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||||||| | ||||||||| ||||||||||||    
T  1031789 gttatcacaaagtggttgtacaaatatcatttctca 1031754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 19315076 - 19315002
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||||||| ||||||| ||| |||||| |||||||  |||||||||||||||||||||| |||||    
T  19315076 gagtagtgatatttgtacaaccatttg-tgacaactttctttttctttcttcttattggtcaaaaacaatagagag 19315002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 39010061 - 39010209
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||||||||| ||||||||||| |||||||||||||||        | |||||||| || |||| |||||| |||||||| |  ||    
T  39010061 tttggtgacaaccttgtttttctc-cttcttattggccaaaaacaatggagacagaaaaaggaagagagatgataagaacatcatttgagtatgag--ag 39010157  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||  |||| ||||||| ||||||||| ||||||||| ||||||||||||    
T  39010158 agaaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctca 39010209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 41495161 - 41495013
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagagga-aaagatcatcatgtgagtatgtgtga 127  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||       | ||||||||| | | | ||| |||||||||||  |  ||    
T  41495161 tttggtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagagaatagaaatc-tcatgtgagta--taaga 41495065  T
Q  128 gagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||| || |||||||||| ||||| ||||||||||||| |||||||||||    
T  41495064 gataaaattttccaaaagttgtcacataatagttgtacaaatatcatttctc 41495013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 44368141 - 44368273
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||||||||| ||||||||||||||||||       | |||||||| || |||| ||||||||||||||  |  ||||||| |||| |||||    
T  44368141 tttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaagagagatgataagaccatcatgtgagtataag--agagaaagttgtacaaaa 44368238  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||| |  |||||||| |||||||||||    
T  44368239 gttgtcacaaattgattgtacaaatatcatttctc 44368273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 56025404 - 56025256
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||||||| ||||||| ||| | ||||||||||||||||||||||       | || |||||||| || | ||||||||||||||| |  ||    
T  56025404 tttggtgacaactttgattttctctcttttgattggtcaaaaacaatggagagagaaaaaggaacagagaggataacaacatcatgtgagtatgag--ag 56025307  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||| |  |||||| ||||||||| |||||||||||    
T  56025306 agaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 56025256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 20956488 - 20956557
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||| |||| |||| ||||||||||||||| ||| | ||||||||||||||||| ||||    
T  20956488 tgatatttgtacatctatttaatgacaactttgtttttctctcttttgattggtcaaaaacaatgaagag 20956557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 24235451 - 24235320
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||||||||||||||||||||||||||||       | ||||||||||| || | ||| |||||||||  || |||||||| |||| |||||     
T  24235451 ttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataaaaccattatgtgagta--tgagagagaaagttgtacaaaaa 24235354  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||| |  |||||||| |||||||||||    
T  24235353 ttgtcacaaattgattgtacaaatatcatttctc 24235320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 54165065 - 54165134
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||| | ||||||||||||||||| ||||    
T  54165065 tgatatttgtacatccatttaatgacaactttgttttcctctcttttgattggtcaaaaacaatgaagag 54165134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 1796503 - 1796366
Alignment:
Q  39 actttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgt 138  Q
    |||||||||||||| |||||||||||||||||| |||||||||       | ||||||||||| || | ||||||| ||  |  || |||||||| ||||    
T  1796503 actttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagaggataa-aacatcatgcgacca--tgagagagaaaattgt 1796407  T
Q  139 ccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||||||| ||||||| | ||||||||| |||||||||||    
T  1796406 acaaaagttgtcacaaattggttgtacaaatatcatttctc 1796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15515932 - 15515880
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  15515932 tttgatgacaaccttgtttttctcactttttattggtcaaaaacaatggagag 15515880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 8026696 - 8026739
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8026696 aactttgtttttctctcttcttattggtcaaaaacaatggagag 8026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 29693967 - 29694042
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| |||||| | ||||| ||||||| ||||||||||| |||||  |||||||||||||||||| |||||||||    
T  29693967 gagtattgatatatatacattcatttgaagataactttgtgtttctgtcttcttattggtcaaaaataatggagag 29694042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 51224773 - 51224910
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcc 140  Q
    |||||||| ||| ||| | ||||||||||||||||| ||||       | ||||||||||| || | ||||||||||||||| |  ||||||| |||||     
T  51224773 tttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaagaaagagagaggataataacatcatgtgagtatgag--agagaaagttgtca 51224870  T
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||| |  |||||| ||||||||| ||||||||||||    
T  51224871 aaaagttgtagcaaaatggttgtacaaatatcatttctca 51224910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 8681064 - 8680940
Alignment:
Q  54 cttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcaca 153  Q
    |||||||||| |||||||||||||||||       | ||||||||| | ||||   ||||||||||||| |  ||||||| ||||||||||  |||||||    
T  8681064 cttcttattgatcaaaaacaatggagagagaaaaaggaagagagagaataagaatctcatgtgagtatgag--agagaaagttgtccaaaaaatatcaca 8680967  T
Q  154 aaatagttgtacaagtatcatttctca 180  Q
     ||| ||||||||| ||||||||||||    
T  8680966 taatggttgtacaaatatcatttctca 8680940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 20632571 - 20632719
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| |||||| ||||| || |||| |||||||||||||||||||||||       ||||||||||  | ||||   |||||||||||  || |||    
T  20632571 tttggtgacaactttatttttttctcttcctattggtcaaaaacaatggagagagaaatagtaagagagataataagaatgtcatgtgagta--tgagag 20632668  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| || | |||||||||||| ||||| |||||| || |||||||||||    
T  20632669 agaaagttatgcaaaagttatcaaaaaatggttgtataaatatcatttctc 20632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 43434505 - 43434439
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatgga 78  Q
    |||||||||||||||||||| |||| ||||||||||| ||  ||| | |||||||||||||||||||    
T  43434505 tgatatttgtacatccatttaatgacaactttgttttcctatcttttgattggtcaaaaacaatgga 43434439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 40629358 - 40629411
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||    
T  40629358 gagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctc 40629411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 49424752 - 49424891
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    |||||||||||||||  ||||||||||| |||||||||||||||       | ||||||||| | ||||  ||  ||||||||  || |||||||| |||    
T  49424752 aactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaagagagagaataagaaaatattgtgagta--tgagagagaaagttg 49424849  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||| | ||||||  ||||||||| |||||||||||    
T  49424850 tcaaaaagttgttacaaaaaggttgtacaaatatcatttctc 49424891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 52669545 - 52669680
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| |||||||||| |||||||||| ||       | |||| ||| || |||| |||||||||| |||| |  ||||||| |||| ||    
T  52669545 ttgtttttctctctttttattggtcagaaacaatggaaagggaaaaaggaagatagaagataagaccatcatgtgactatgag--agagaaagttgtaca 52669642  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||| |  |||||||| |||||||||||    
T  52669643 aaagttatcacaaattgtttgtacaaatatcatttctc 52669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 2193732 - 2193784
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||  ||||||||||| ||||||||||||||||||||||||||||    
T  2193732 tttgatgacaatcttgtttttctctcttcttattggtcaaaaacaatggagag 2193784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 32365590 - 32365642
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| || |||||||| ||| ||||||||||||||||||||||||    
T  32365590 tttgatgataacattatttttctctctttttattggtcaaaaacaatggagag 32365642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 36728545 - 36728597
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  36728545 tttggtgacaactttgtttttctctcttcttattggtaaaaaacaatggagag 36728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 53384276 - 53384316
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  53384276 tttgtttttctctcttcttattggtcaaaaacaatggagag 53384316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 20056449 - 20056386
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttattatc 189  Q
    |||||||| |||||||||| |||| ||| ||||||||||||| |||||||||||  ||||||||    
T  20056449 gagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttctctattattatc 20056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20056570 - 20056527
Alignment:
Q  1 attatgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  20056570 attatgagtagtgatatttgtacatccaattgatgacaactttg 20056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 33484120 - 33484175
Alignment:
Q  120 atgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatt 175  Q
    ||||| |||||||| |||||||||| |||||||||||| ||||||||| |||||||    
T  33484120 atgtgagagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatcatt 33484175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 44170526 - 44170690
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    ||||||||||| ||| |||| ||||||||||| |||  ||| ||| | |||| ||||||||||| || ||       | ||||||||||| || | ||||    
T  44170526 tgatatttgtatatctatttaatgataactttatttc-ctctcttttgattgatcaaaaacaattgacagagaaaaaggaagagagaggataataacatc 44170624  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || | ||||||||  ||||||| ||||| |||| |||| ||||||| ||||||||| |||||||||||    
T  44170625 atataagtatgtg--agagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctc 44170690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 4896439 - 4896571
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| | ||||||||||||||||||||||       | ||||||||| | | ||  || ||||||||||| |  ||||||| ||||| ||||    
T  4896439 tttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagagaataggagtataatgtgagtatgcg--agagaaagttgtcaaaaa 4896536  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||| | ||||||||| |||||||||||    
T  4896537 gttgtcacaaagtggttgtacaaatatcatttctc 4896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 19720564 - 19720716
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||| |||||| ||||  || | ||||||||||||||||| ||||       | ||||||||||||||||  || ||||||||| | |  ||    
T  19720564 tttgatgacaaccttgtttctctcttttataattggtcaaaaacaatgaagagagaaaaagaaagagagaggaaaagaatattatgtgagtaagag--ag 19720661  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||| || | |||||||| ||||||||| | ||| ||| |||||||||||||||    
T  19720662 agaaagttattcaaaagttgtcacaaaatggatgtgcaaatatcatttctcattt 19720716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 25936375 - 25936255
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||||||||  |||||||||||||||||||||||||||       ||||||||||  | ||||   || ||||||||  || |||||||| |||| ||    
T  25936375 ttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaagtaagagagataataagaatgtcttgtgagta--tgagagagaaagttgtgca 25936278  T
Q  142 aaagttatcacaaaatagttgta 164  Q
    |||||| ||| ||||||||||||    
T  25936277 aaagttgtcaaaaaatagttgta 25936255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 169520 - 169573
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||||| ||||||||| |||||||||||    
T  169520 gagagaaaattgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 8455914 - 8455861
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||| |||||||| ||||||||||||||||||| || ||||||||    
T  8455914 gagagaaagttgttcaaaagttgtcacaaaatagttgtacaaataacatttctc 8455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 8456068 - 8455999
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||| ||||||| ||| ||| || |||||||| ||| |||||||||||||||||| |||||    
T  8456068 tgatatttgaacaaccatttggtgacaaccttctttttctctctttttattggtcaaaaacaatagagag 8455999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 9032915 - 9032776
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||||||||  || ||||||||||||||||||||||||         |||  ||| || |||| |||||||| |||||| |  ||||||| |||| ||    
T  9032915 ttgtttttctctttttttattggtcaaaaacaatggagagagaaaaatgaagttagaagataagaccatcatgtaagtatgag--agagaaagttgtaca 9032818  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||| ||||||| |  |||||||| |||||||||||||||    
T  9032817 aaagttgtcacaaattgattgtacaaatatcatttctcattt 9032776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 15638316 - 15638275
Alignment:
Q  3 tatgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  15638316 tatgagtagtgatatttgtacatccaattgatgacaactttg 15638275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 46844164 - 46844311
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||||||||||||||| ||| |||||||| |||||||||||||||         ||||||||  | ||||   |||||||||||  || |||    
T  46844164 tttggtgacaactttgtttttctctctttttattggttaaaaacaatggagagagaaaaaagaagagagaaaataagaatgtcatgtgagta--tgagag 46844261  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    ||||| ||||| |||| || | ||||||||||||||||  ||||||||||    
T  46844262 agaaagttgtcaaaaaattgttacaaaatagttgtacagatatcatttct 46844311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 47014992 - 47014939
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||    
T  47014992 gagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttctc 47014939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 51039134 - 51039191
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||| ||| ||||| ||||||| ||||||| ||||||||||| |||||||||||||||    
T  51039134 gagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcatttctcattt 51039191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 53662413 - 53662499
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||| | |||| |||||||||| |||| |  ||||||| |||| ||||| || | ||||||||||||||||| |||||||||||    
T  53662413 aagagagagaataagaacatcatgtgaatatgag--agagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctc 53662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 4100690 - 4100830
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagaga--ggaaaagatcatcatgtgagtatgtgtgagagaaatttgtc 139  Q
    ||||||||||| ||| ||||||||||| ||||||| ||||       | ||||||||  ||| |||| ||| ||||||||||| |  ||||||| ||||     
T  4100690 ttgtttttctctctttttattggtcaagaacaatg-agagagaaaaaggaagagagatcggataagaacattatgtgagtatgag--agagaaaattgta 4100786  T
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||| | ||||||||| |||| |||| |||||||||||||||    
T  4100787 caaaaggtgtcacaaaatggttgaacaaatatcatttctcattt 4100830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 18880917 - 18880783
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||||||||||||  |||| |||||||||       | |||| |||| | ||||  || ||||||||||| |  ||||||| ||||| ||||    
T  18880917 tttttctctcttcttattggttgaaaataatggagagagaaaatgaaagatagagaataagaatataatgtgagtatgag--agagaaaattgtctaaaa 18880820  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||| ||||| ||||||||  |||||||||||||    
T  18880819 gttatcataaaattgttgtacatatatcatttctcat 18880783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23094428 - 23094376
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| |||||||||||||||||  |||||||| |||||||||||    
T  23094428 agagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctc 23094376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 31240701 - 31240645
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||| ||||  ||||||||||||||| | ||||||||| ||||||||||||||    
T  31240701 gagagaaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttctcatt 31240645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 42853991 - 42853939
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  42853991 agagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 42853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 3475922 - 3475867
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||| |||| |||||||| ||| ||||| ||||||||| |||||||||||||    
T  3475922 gagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttctcat 3475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 15638265 - 15638226
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  15638265 ttgtttttctctcttcttattggacaaaaacaatggagag 15638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 18568738 - 18568887
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||| ||||||  ||||||||||||||||||||||| ||||       |||| |||| | | || |  |||||||||||||  |  ||    
T  18568738 tttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatgaagagagaaaaagtaaaagagggaataaaaatatcatgtgagtataag--ag 18568835  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    | ||| ||||||||||||| ||||||||| |||||| || ||||||||||||    
T  18568836 aaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctca 18568887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 18874863 - 18874992
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||||| ||||||||||||||||||||||       | |||||||||   ||||  || |||||||||  || |||||||| ||||| ||||    
T  18874863 tttttctctcttctcattggtcaaaaacaatggagagagaaaaaggaagagagag--taagaatataatgtgagta--tgagagagaaagttgtctaaaa 18874958  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||| ||||| ||||||||| |||||||||||    
T  18874959 gttgtcaaaaaat-gttgtacaaatatcatttctc 18874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 31147402 - 31147327
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| ||||||    || ||||| ||||||  ||||||| ||||||||||||| ||||||||||||||    
T  31147402 gagtagtgatatatgtacacaacttcgatgacaacttttattttctctcttcttattggtccaaaacaatggagag 31147327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 39449212 - 39449173
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  39449212 caaaagttatcacaaaatagttgtataaatatcatttctc 39449173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 44626644 - 44626597
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctcatttatta 187  Q
    |||||||||||| ||||||||||| ||| ||||||||||| |||||||    
T  44626644 caaaagttatcataaaatagttgttcaaatatcatttctcttttatta 44626597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 48650192 - 48650231
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  48650192 ttgttgttctctcttcttattggtcaaaaacaatggagag 48650231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 53662370 - 53662417
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  53662370 tgataattttgtttttctctcttcttattagtcaaaaacaatgaagag 53662417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 54251470 - 54251525
Alignment:
Q  128 gagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||| ||||| |||| |||| | ||||||||||||||| |||||||||||||||    
T  54251470 gagaaagttgtcgaaaaattattaaaaaatagttgtacaaatatcatttctcattt 54251525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 54921605 - 54921554
Alignment:
Q  125 tgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||| ||||| |||| |||| ||||||||||||| ||||||||||||    
T  54921605 tgagagaaaattgtctaaaaattattacaaaatagttgttcaagtatcattt 54921554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 9162198 - 9162066
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| | ||||||||||||||||||||||       | ||||||||| | ||||  || ||| ||||||  |  ||||||| ||||| ||||    
T  9162198 tttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagagaataagagaataatgcgagtattag--agagaaaattgtcaaaaa 9162101  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| |||||||||  |||||||| |||||||||||    
T  9162100 gttgtcacaaaatgattgtacaaatatcatttctc 9162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 18568703 - 18568741
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  18568703 gagtagtgatatttgtacatccaattgatgacaactttg 18568741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 25523216 - 25523270
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| ||||| ||||||| | | ||||||||||||||| ||||||||||||    
T  25523216 gagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctca 25523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 29513684 - 29513767
Alignment:
Q  94 agagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| || | ||||||||||||||| |  ||||||| ||||| ||||||| |  |||||| ||||||||| |||||||||||    
T  29513684 agagaggataacaacatcatgtgagtatgag--agagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 29513767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 31995948 - 31995990
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||    
T  31995948 caaaatttatcaaaaaatagttgtacaaatatcatttctcatt 31995990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 32365551 - 32365593
Alignment:
Q  2 ttatgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||| |||||||| |||| ||||||||||||    
T  32365551 ttatgagtagtgatatatgtacatctattttatgataactttg 32365593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 33820239 - 33820407
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||||| || ||  |||| |||||| |||||||| ||| | |||||| ||||| ||| |||||       | || |||||| | ||     
T  33820239 gagtagtgatatttgtacaaccttt--atgacaactttatttttctctcttttgattggt-aaaaataatagagagagaaaaaggaaaagagagaataaa 33820335  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||| ||||||||||| |  ||||||| ||||| ||||||| | | ||||||||||||||| |||||||||||    
T  33820336 aacataatgtgagtatgag--agagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 33820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 35017191 - 35017153
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  35017191 aaaagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 42815458 - 42815404
Alignment:
Q  126 gagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| |||||||| | ||||||||||||||||| |||||||||||    
T  42815458 gagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctc 42815404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 45176654 - 45176708
Alignment:
Q  27 catttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| |||| ||||||||||| ||| ||| | ||||||||||||||||||||||    
T  45176654 catttaatgacaactttgttttcctctcttttgattggtcaaaaacaatggagag 45176708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 45548769 - 45548864
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttattat 188  Q
    ||||||||||| ||   |||||||||||||||    ||| ||| ||||| |||| |||||||||||| ||||||||| |||||||||| ||| |||||    
T  45548769 aagagagaggataatgacatcatgtgagtatgaa--agaaaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttcttattcattat 45548864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 9472531 - 9472584
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| |||| |||| | ||||||||||||||| |||||||||||    
T  9472531 gagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctc 9472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 12241111 - 12241058
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| | | ||||||||||||||| |||||||||||    
T  12241111 gagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 12241058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 19720526 - 19720567
Alignment:
Q  3 tatgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  19720526 tatgagtagtgatatatgtacatccatttgaagacaactttg 19720567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 32901512 - 32901479
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataa 39  Q
    ||||||||||||||||||||||| ||||||||||    
T  32901512 gagtagtgatatttgtacatccaattgatgataa 32901479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 33093138 - 33093175
Alignment:
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  33093138 aaagttgtcacaaaatagttgtacaaatatcatttctc 33093175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 34116558 - 34116611
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||    
T  34116558 gagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 34116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 34259868 - 34259815
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||| ||| |||| ||||||||| ||||||||| |||||||||||    
T  34259868 gagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctc 34259815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 36444413 - 36444466
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||||||| ||||| ||||||||| |||||||||||    
T  36444413 gagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 44272828 - 44272881
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||| ||| ||||||||||||||| |||||||||||    
T  44272828 gagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 44272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 46912698 - 46912774
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||| |||||   ||||||  || ||||||  ||||||| ||||||||||||| ||||||||||||||    
T  46912698 atgagtagtgatatatgtacgatcatttgg-gacaactttcattttctctcttcttattggtccaaaacaatggagag 46912774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 55960753 - 55960696
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| |||| ||||||||||  |||||| ||| ||||| |||||||||||||||    
T  55960753 gagagaaaattgtacaaaagttataccaaaatggttatacaaatatcatttctcattt 55960696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 5234410 - 5234446
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  5234410 tttttctctctttttattggtcaaaaacaatggagag 5234446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 19910993 - 19910953
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtt 46  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  19910993 gagtaatgatatttggacattcatttgatgataactttgtt 19910953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 29863603 - 29863551
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| |||| ||||||||||  |||||| ||||||||| |||||||||||    
T  29863603 agagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 29863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 31658051 - 31658015
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  31658051 tttttctcacttttcattggtcaaaaacaatggagag 31658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 32303317 - 32303353
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  32303317 caaaaattatcacaaaatagttgtacaaatatcattt 32303353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 33860485 - 33860521
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  33860485 tttttctctcttattattggtcaaaaacaatggagag 33860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 34028028 - 34027992
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  34028028 tttttctctcttctcattggtcaaaaacaatggagag 34027992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 34974585 - 34974549
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  34974585 tttttctcacttttcattggtcaaaaacaatggagag 34974549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 39844197 - 39844233
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  39844197 tttttctctctttttattggtcaaaaacaatggagag 39844233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 51318747 - 51318703
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||||| | ||||||||| |||||||||||    
T  51318747 ttgtcaaaaagttatcacaaagtggttgtacaaatatcatttctc 51318703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 54801042 - 54800998
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||||| | ||||||||| |||||||||||    
T  54801042 ttgtctaaaagttatcacaaagtggttgtacaaatatcatttctc 54800998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 55642495 - 55642531
Alignment:
Q  8 gtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||| || ||||||||||||    
T  55642495 gtagtgatatttgtacatccaattaatgataactttg 55642531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 42256625 - 42256450
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| |||| ||| ||||||||||  |||||||| || ||||||||||||||||       | ||||||||||| |||| ||||    
T  42256625 tgatatttgtacatccatttcatgacaaccttgtttttctttcttcttatcggccaaaaacaatggagagagaaaaaggaagagagaggataagaccatc 42256526  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttattatc 189  Q
    ||||||||||| |  ||||||| |||| | |||||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  42256525 atgtgagtatgag--agagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctcttttattatc 42256450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 5959559 - 5959386
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||         ||||||||| | |||    
T  5959559 gagtagtgatatttgtacatccaattgatgacaactttgattttctctcttcttattggtcaaaaacaatggagagagagaaacgaagagagagaataag 5959460  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |   |||||||||||  || |||||||| ||||||||||||| ||||| ||| ||| ||||| |||||||||||||    
T  5959459 aatctcatgtgagta--tgagagagaaagttgtccaaaagttgtcacataatggttatacaaatatcatttctcat 5959386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 13813693 - 13813555
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  13813693 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtaca 13813596  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
     ||||| ||||||| | ||||||||| ||||||||||||||    
T  13813595 gaagttgtcacaaattggttgtacaaatatcatttctcatt 13813555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 26501439 - 26501295
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaa 132  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||         || |||||||| |||| |||||||| |||||| |  ||||||    
T  26501439 atgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaatagagaggataagaacatcatgtaagtatgag--agagaa 26501342  T
Q  133 atttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||||||||||||||| ||||||| ||||||||| |||||||||||    
T  26501341 agttgtccaaaagttattacaaaatggttgtacaaatatcatttctc 26501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 29489295 - 29489430
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||  ||||||||||||||||||||||||||||         ||||||||||| |||| ||||||||||||||| |  ||||||| |||| |     
T  29489295 ttgtttttctttcttcttattggtcaaaaacaatggagagagaaaaaagaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtacc 29489392  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  29489393 aaagttatcacaaaatggttgtacaaatatcatttctc 29489430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 25130838 - 25130706
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||| ||||       | ||||||||||| ||||||||||||||||||  || |||||||| |||| ||    
T  25130838 ttgtttttctctcttcttattggtcaaaaacaatgaagagggaaaaaggaagagagaggataagatcatcatgtgagta--tgagagagaaagttgtaca 25130741  T
Q  142 aaagttatcacaaaatagttgtacaagtatcattt 176  Q
    |||||| ||||||| |  |||||||| ||||||||    
T  25130740 aaagttgtcacaaattgattgtacaaatatcattt 25130706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 179
Target Start/End: Original strand, 7371876 - 7372019
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||       | | ||||||||| |||| |||||| | ||||  || ||||||||    
T  7371876 tgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaggagagaggataagaccatcatataagta--tgagagagaaa 7371973  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||| ||||| || ||| ||| ||||||||||| |||||||||||    
T  7371974 attgtacaaaaattgtcataaattagttgtacaaatatcatttctc 7372019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 7078423 - 7078571
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||| |||||| ||||  |||| ||||||||||||||||||||||       | |||||||| |||||||  || ||||||||||| |  ||    
T  7078423 tttgatgacaaccttgtttctctcttttctaattggtcaaaaacaatggagagaggaaaaggaagagagaagaaaagaatattatgtgagtatgag--ag 7078520  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| |||| |||||||| ||||||||||| ||||||| |||||||||||    
T  7078521 agaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcatttctc 7078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 2257600 - 2257669
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||||||    
T  2257600 tgatatttgtacatccatttgatgacaactttgttttcctctcttttgattggtcaaaaacaatggagag 2257669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 48678857 - 48678926
Alignment:
Q  10 agtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggag 79  Q
    |||||||| || |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  48678857 agtgatatatgaacatccatttgaagataactttgtttttctcattttttattggtcaaaaacaatggag 48678926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 25995592 - 25995459
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| ||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||  || |||||||| |||| |||||    
T  25995592 tttttctctctttttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagta--tgagagagaaagttgtacaaaa 25995495  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctca 180  Q
     || ||||||| |  |||||||| ||||||||||||    
T  25995494 cttgtcacaaattgattgtacaaatatcatttctca 25995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 29362600 - 29362667
Alignment:
Q  14 atatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| |||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  29362600 atatttgtatatccattccatgacaactttgtttttctctcttcttattggtcaaaaacaatggagag 29362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 27578317 - 27578181
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||||||||  |||||||||||||||||||||||||||       | ||||||||||| |||| |||||||| ||||  |  |||||||| |||| ||    
T  27578317 ttgtttttctctattcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataagaccatcatgtaagta--taagagagaaagttgtaca 27578220  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||| || |||| || |||||||| ||||||||||||    
T  27578219 aaagttgtcccaaattaattgtacaaatatcatttctca 27578181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 9011780 - 9011645
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||| | |  || || |||||||| ||||       
T  9011780 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataagaccatcatataa--atatgagagagaaagttgtatc 9011683  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||||| ||||||||| |||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctc 9011645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 26585125 - 26585244
Alignment:
Q  58 ttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaat 157  Q
    |||||||||||||| |||||||||       | ||||||||||| |||| ||||||| || |||| |  ||| ||| |||| ||||||||||||||||||    
T  26585125 ttattggtcaaaaataatggagagagaaaaaggaagagagaggataagaccatcatgcgattatgag--agaaaaagttgtacaaaagttatcacaaaat 26585222  T
Q  158 agttgtacaagtatcatttctc 179  Q
    |||||||||| |||||||||||    
T  26585223 agttgtacaaatatcatttctc 26585244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 27352761 - 27352630
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||| | ||||||||||||||||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| |||||||||||    
T  27352761 ttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtccaaaag 27352664  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||| ||||||||| |||||||||||    
T  27352663 ttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 36669306 - 36669441
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||||||||||| |||||||||       | ||||||||||| || | |||||||||||||  || |||| ||| |||| ||    
T  36669306 ttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagaggataaaaacatcatgtgagta--tgagagaaaaagttgtaca 36669403  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| |||||||||| |  |||||||| |||||||||||    
T  36669404 aaaattatcacaaattgattgtacaaatatcatttctc 36669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 43056887 - 43056720
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||| |||||| |||| ||||| ||||| | ||||||||||||||| |||  ||||| ||||||| |||||||||       | ||||||||||| |||    
T  43056887 gagtaatgatatatgtaaatccaattgataacaactttgtttttctctctttctattgatcaaaaataatggagagaggaaaagaaagagagaggataag 43056788  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatt 175  Q
    |   |||||||||||  || |||||||| |||||||||| ||||  |||||| ||||||||| |||||||    
T  43056787 aatgtcatgtgagta--tgagagagaaagttgtccaaaaattattgcaaaatggttgtacaaatatcatt 43056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 11097833 - 11097955
Alignment:
Q  55 ttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaa 154  Q
    |||| ||||||||||||||||||||||       | ||||||||||||||||  || ||||||||||| |  ||||||| |||| |||||||| ||||||    
T  11097833 ttctaattggtcaaaaacaatggagagagaaaaaggaagagagaggaaaagaatattatgtgagtatgag--agagaaagttgttcaaaagttgtcacaa 11097930  T
Q  155 aatagttgtacaagtatcatttctc 179  Q
    ||| | ||||||| |||||||||||    
T  11097931 aatggatgtacaaatatcatttctc 11097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 35972710 - 35972875
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||| ||||||||| |||| ||||||| |||| || |||||||||| | |||||||||||||||         |||||||| || ||||  |||    
T  35972710 tgatatttgttcatccatttcatgacaactttgcttttttctcttcttattgataaaaaacaatggagagagaaaaatgaagagagaagataagaatatc 35972809  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||  |||  || |||||||| |||| |||||||| ||||||||| |||| |||| |||||||||||    
T  35972810 atgtttgta--tgagagagaaagttgtacaaaagttgtcacaaaatggttgaacaaatatcatttctc 35972875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 15061993 - 15061841
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| |||||| |||||||| ||| |||||||  |||||||||||||||       | ||||||||| | ||||| || ||||||||||| |  ||    
T  15061993 tttggtgacaactttttttttctctctttttattggataaaaacaatggagagagaaaaaggaagagagagaataagatgataatgtgagtatgag--ag 15061896  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||| ||||| ||||||| ||||||| | ||| ||||| |||||||||||||||    
T  15061895 agaaaattgtcaaaaagttgtcacaaagtggttatacaaatatcatttctcattt 15061841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 27563649 - 27563580
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||||||||| |||| || |||||||||||| ||| | |||||||| |||||||||||||    
T  27563649 tgatatttgtacatccatttaatgacaattttgtttttctctcttttgattggtcataaacaatggagag 27563580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 48871882 - 48872026
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaa 132  Q
    |||| ||| |||||||||||  | |||||| ||||||||||||||||||         |||||||||||||||| ||||||||||||||| |   |||||    
T  48871882 atgacaaccttgtttttctccttccttattagtcaaaaacaatggagagagaaaaatgaagagagaggaaaagaacatcatgtgagtatgag---gagaa 48871978  T
Q  133 atttgtcc-aaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    | |||||| ||||||| ||||  ||||||||||||| ||||||||||||    
T  48871979 agttgtccaaaaagttgtcac-gaatagttgtacaaatatcatttctca 48872026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 30631784 - 30631915
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||||||| | ||||||||||||||||||||||       | ||||||||| ||||   ||| || |||||||| |  ||||||| ||||| ||||    
T  30631784 tttttctcacttttcattggtcaaaaacaatggagagagaaaaaggaagagagagaaaaaa--cataatatgagtatgag--agagaaagttgtcaaaaa 30631879  T
Q  145 gttatcac-aaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||||| |||||||||||||||||||    
T  30631880 gttatcacaaaaatagatgtacaagtatcatttctc 30631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 34395843 - 34395996
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| |||||||||| ||||  |||| ||||||||||| ||||||||||       | |||||||||||||| |  || |||||||||  || |||    
T  34395843 tttgatgacaactttgtttctctcttttctaattggtcaaaa-caatggagagagaaaaaggaagagagaggaaaataatattatgtgagta--tgagag 34395939  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    ||||| |||| |||||||| ||| ||||||| ||||||| |||||||| || |||||    
T  34395940 agaaagttgttcaaaagttgtcataaaatagatgtacaaatatcatttatcctttat 34395996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 6829721 - 6829854
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||||||||||| ||| |||||       | |||||||| || |||| |||||||||| |    | |||| ||| |||| ||    
T  6829721 ttgtttttctctcttcttattggtcaaaaataatagagagagaaaaaggaagagagatgataagaccatcatgtgaat----gagagataaagttgtaca 6829816  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| ||||||||||| |||||||||||    
T  6829817 aaagttgtcacaaattagttgtacaaatatcatttctc 6829854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 43457742 - 43457890
Alignment:
Q  28 atttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtga 127  Q
    ||||||||| ||| ||||||||||   || |||||| ||||||| |||||||||       | |||||||||||||| | ||| ||| || |||| |  |    
T  43457742 atttgatgacaaccttgtttttctgtttt-ttattgatcaaaaagaatggagagagaaaaaggaagagagaggaaaataacataatgagaatatgag--a 43457838  T
Q  128 gagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| |||||||||||||||| |||||| ||||||||| |||||||||||    
T  43457839 gagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctc 43457890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 42843267 - 42843415
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||       |||| |||||  | ||||   |||||||||||  |  |||    
T  42843267 tttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaaaagagataataagaatgtcatgtgagta--taagag 42843364  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||| || | |||||||||||| ||||| ||||||||| |||||||||||    
T  42843365 aaaaaattatgcaaaagttatcaaaaaattgttgtacaaatatcatttctc 42843415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 43196012 - 43196160
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||||||||||| | ||||| ||| | ||||||||||||||||||||||       | ||||||||| | || | |||||||||||||  || |||    
T  43196012 tttggtgataactttgatgttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagagagagaataacaacatcatgtgagta--tgagag 43196109  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||| |  |||||| | ||||||| |||||||||||    
T  43196110 agaaaattgtcaaaaagttgtagcaaaatggatgtacaaatatcatttctc 43196160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 3607940 - 3608009
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||||| || |||||| || ||||| ||| |||||||||||||| |||||||||    
T  3607940 tgatttttgtacatccatttgaagacaactttattgttctctctttttattggtcaaaaataatggagag 3608009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 19651540 - 19651410
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| ||||||||||||||||||||||||       | ||||||||| | |||| ||||||||||||||| |  ||||||| || | |||||    
T  19651540 tttttctctctttttattggtcaaaaacaatggagagaaaaa--ggaagagagagaataagaacatcatgtgagtatgag--agagaaagttatacaaaa 19651445  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||||| ||||||  | |||||||||||    
T  19651444 gttgtcacaaaatggttgtaggaatatcatttctc 19651410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 38019524 - 38019581
Alignment:
Q  128 gagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    |||||| ||||| |||||||||||||||||| || ||||| |||||||||||||||||    
T  38019524 gagaaagttgtctaaaagttatcacaaaataattatacaaatatcatttctcatttat 38019581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 46902666 - 46902613
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||||||||| || ||||||||||||| |||||||||||||||||    
T  46902666 gagagaaagttgtccaaaaattgtcacaaaatagttatacaagtatcatttctc 46902613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 19920910 - 19920858
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  19920910 tttggtgacaactttgtttttctctcttcttattggtcaaaaacaatgaagag 19920858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 52417679 - 52417627
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||||||||||||    
T  52417679 tttgatgataactttcattttctctcttcttattggtccaaaacaatggagag 52417627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 51193060 - 51193202
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaa 132  Q
    |||| ||| ||||||||||| ||||||||||| |||||| |||||||||         |||||  ||||||||| |||||||||||||  || |||||||    
T  51193060 atgacaacattgtttttctctcttcttattggccaaaaataatggagagagaaaaatgaagag--aggaaaagagcatcatgtgagta--tgagagagaa 51193155  T
Q  133 atttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||||||| || | | ||||| | ||||||| |||||||||||    
T  51193156 agttgtccaaaaattgttataaaatggatgtacaaatatcatttctc 51193202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 3919353 - 3919299
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| |||||||||| |||| ||||||| ||||||||| ||||||||||||    
T  3919353 gagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctca 3919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 46281490 - 46281432
Alignment:
Q  126 gagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||| |||||||||||||||    
T  46281490 gagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctcattt 46281432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 50777346 - 50777494
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||||||||| |||||||||||| ||||||||| |||||       | ||||||||| ||||||   |||||||||||  || |||    
T  50777346 tttggtgacaaccttgtttttctctcttcttattggttaaaaacaatagagagataaaaaggaagagagagaaaaagaatctcatgtgagta--tgagag 50777443  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| || ||||||| || || || ||| ||||||||| ||||| |||||    
T  50777444 agaaagttatccaaaaattgtcgcataatggttgtacaaatatcacttctc 50777494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 18610826 - 18610773
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||    
T  18610826 gagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 25239163 - 25239212
Alignment:
Q  33 atgataactttgttttt-ctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  25239163 atgataacttttttttttctctcttcttattggtcaaaaacaatggagag 25239212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 51157574 - 51157488
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgt-ccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    |||||||||||||||| |||||||||||  |||| || ||||| |||| | ||||||||||||||||| | ||||||| ||| ||||||    
T  51157574 aagagagaggaaaagaacatcatgtgag--tgtgagaaagaaaattgtacaaaaagttatcacaaaattgatgtacaaatataatttct 51157488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 51168786 - 51168839
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  51168786 gagaaaaagttgtctaaaagttatcacaaaatgattgtacaagtatcatttctc 51168839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 6841935 - 6841887
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| |||||| |||||||| ||| ||||||||||||||||||||||||    
T  6841935 atgacaactttctttttctctctttttattggtcaaaaacaatggagag 6841887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 11812475 - 11812387
Alignment:
Q  89 gtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| |||||| |||||||||||||  || || | ||| ||||| |||| || |||||||||  |||||||| |||||||||||    
T  11812475 gtaagagagagaaaaagaacatcatgtgagta--tgagaaataaagttgtcaaaaaattgtcacaaaatgattgtacaactatcatttctc 11812387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 30530322 - 30530373
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggaga 80  Q
    |||||||| ||||||  ||||||| ||||||||||||| |||||||||||||    
T  30530322 tttgatgacaactttcattttctctcttcttattggtccaaaacaatggaga 30530373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 33660229 - 33660190
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataacttt 43  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  33660229 atgagtagtgatatatgtacatccatttgatgacaacttt 33660190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 34157856 - 34157805
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||| |||||||||| ||||||||||||| || ||||| ||||||||||||    
T  34157856 agaaagttgtccaaaaattatcacaaaataattatacaaatatcatttctca 34157805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 49699737 - 49699825
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||||| |||||| ||||||||||||||  |  | ||||| ||||  |||| |||||| ||||| ||||||||| |||||||||||||    
T  49699737 aagagagagaaaaagaacatcatgtgagtataag--aaagaaagttgttaaaaaattatcataaaatggttgtacaaatatcatttctcat 49699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 51193019 - 51193058
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataacttt 43  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  51193019 atgagtagtgatatatgtacatccatttgatgacaacttt 51193058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 14442313 - 14442255
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    |||||||| |||||  ||| || ||||||||||||||||||| |||||| |||||||||    
T  14442313 gagagaaagttgtcacaaaattgtcacaaaatagttgtacaaatatcatctctcattta 14442255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 18959120 - 18959005
Alignment:
Q  60 attggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatag 159  Q
    ||||||||||||||||||||||       | ||||||||| | ||||| || |||||||||  || |||||||| ||||| ||||||| | ||||||| |    
T  18959120 attggtcaaaaacaatggagagagaaaagg-aagagagagaataagataataatgtgagta--tgagagagaaaattgtcaaaaagttgtaacaaaatgg 18959024  T
Q  160 ttgtacaagtatcatttct 178  Q
    ||||| || ||||||||||    
T  18959023 ttgtataaatatcatttct 18959005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 49621416 - 49621362
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| ||||| |||| |||| ||||||| ||||||||| ||||||||||||    
T  49621416 gagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttctca 49621362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 50797963 - 50797925
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  50797963 gagtagtgatatttgtacatctaattgatgataactttg 50797925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 8934611 - 8934667
Alignment:
Q  125 tgagagaaat--ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||  ||||| ||||||| ||||||||||||||||||| ||| |||||||    
T  8934611 tgagagaaatagttgtcaaaaagttgtcacaaaatagttgtacaaatataatttctc 8934667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 16658491 - 16658434
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| ||||| ||||||| ||||||  | ||||||||| |||||||||||||||    
T  16658491 gagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctcattt 16658434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 25994943 - 25994984
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    |||||||||| ||||||||||||| |||||||| ||||||||    
T  25994943 ttgtccaaaaattatcacaaaataattgtacaaatatcattt 25994984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 26101435 - 26101394
Alignment:
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||||||||||| |||||||| |||||||||||    
T  26101435 tccaaaaattatcacaaaataattgtacaaatatcatttctc 26101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 26839436 - 26839383
Alignment:
Q  125 tgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    ||||||||| |||| |||||||||||| ||||| ||||||||| || |||||||    
T  26839436 tgagagaaagttgtacaaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 30530592 - 30530645
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||||| |||||| || |||||||||||    
T  30530592 gagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttctc 30530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 48896587 - 48896632
Alignment:
Q  7 agtagtgatatttgtacatccatttgatgataactttgtttttctc 52  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||    
T  48896587 agtaatgatatttgtacatctaattgatgattactttgtttttctc 48896632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 50226897 - 50226950
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||    
T  50226897 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 50226950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 51704693 - 51704762
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| |||||||| |||| ||||| |||||| || | | | |||||||||||| |||||||||    
T  51704693 tgatatttgtatatccatttaatgacaacttagtttttttctcctttgattggtcaaaaataatggagag 51704762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 52261376 - 52261335
Alignment:
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||||| ||||||||||| ||| |||||||||||||||    
T  52261376 aaagttatcataaaatagttgttcaaatatcatttctcattt 52261335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 2827645 - 2827685
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||| ||||| |||||||||||||||||||||| |||||    
T  2827645 tttgttgttctctcttcttattggtcaaaaacaatagagag 2827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 5477102 - 5477138
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  5477102 tttttctctctttttattggtcaaaaacaatggagag 5477138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 9882677 - 9882729
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    |||| ||| ||||| ||| ||| ||||||||||||||||||| ||||||||||    
T  9882677 gagataaagttgtcaaaatgttgtcacaaaatagttgtacaaatatcatttct 9882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 10385591 - 10385559
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||| ||||||||||||    
T  10385591 tgatatttgtacatccatttaatgataactttg 10385559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 21255724 - 21255760
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  21255724 tttttctctcttctcattggtcaaaaacaatggagag 21255760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 32966399 - 32966363
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  32966399 tttttctctctttttattggtcaaaaacaatggagag 32966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 34002243 - 34002295
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||| | ||||||  ||||||| ||||||||||||| ||||||||||||||    
T  34002243 tttgatcacaactttcattttctctcttcttattggtccaaaacaatggagag 34002295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 34941863 - 34941895
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||||||||||||||||    
T  34941863 tctctcttcttattggtcaaaaacaatggagag 34941895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 35846258 - 35846294
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  35846258 tttttctcacttttcattggtcaaaaacaatggagag 35846294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 36794667 - 36794615
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||| ||||||| ||||  ||||||| |||||||| |||||||||||    
T  36794667 agagaaatttatccaaaaattataccaaaataattgtacaaatatcatttctc 36794615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 36930695 - 36930731
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  36930695 tttttctctctttttattggtcaaaaacaatggagag 36930731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 43755697 - 43755749
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| |||| |||||| ||||| ||||||||| |||||||||||    
T  43755697 agagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcatttctc 43755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 45350128 - 45350168
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||| ||||||||||||| |||||||| |||||||||||||    
T  45350128 aaaaattatcacaaaataattgtacaaatatcatttctcat 45350168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 45470762 - 45470814
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||| | ||||||  ||||||| ||||||||||||| ||||||||||||||    
T  45470762 tttgatcacaactttcattttctctcttcttattggtccaaaacaatggagag 45470814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 48325354 - 48325318
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  48325354 tttttctctcttctcattggtcaaaaacaatggagag 48325318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 50145784 - 50145869
Alignment:
Q  89 gtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    |||||||||| || || | |||||| |||||||| |  ||||||| || | |||||||| ||||||||||||||||||| ||| ||||    
T  50145784 gtaagagagatgataacaacatcatatgagtatgag--agagaaaattattcaaaagttgtcacaaaatagttgtacaaatattattt 50145869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 7129681 - 7129536
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||       | ||| ||||||||||||  ||||||||||||||||  ||    
T  7129681 tttgatgacaactttgtttttctctcttcttattggtcaaaaacaacggagagagaaaaaggaagggagaggaaaagaaaatcatgtgagtatgtg--ag 7129584  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||| ||||||||||||| ||||||||| ||||||||| ||| ||||    
T  7129583 agaaagttgtccaaaagttgtcacaaaatggttgtacaaatattattt 7129536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 29509431 - 29509264
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||| ||||| |||| ||||||||||| ||| ||| ||||||||||||||||||| ||||       | ||||||||||| || |  |||    
T  29509431 tgatatttgtacattcatttaatgacaactttgttttcctctctttttattggtcaaaaacaatgaagagagaaaaaggaagagagaggataataatatc 29509332  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||||  || |||||||| ||||| ||||||| |  |||||| ||||||||| |||||||||||||    
T  29509331 atgtgagta--tgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcat 29509264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 41273650 - 41273515
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  41273650 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtaca 41273553  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| |  |||||||| |||||||||||    
T  41273552 aaagttgtcacaaattgtttgtacaaatatcatttctc 41273515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 37562064 - 37562212
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||        | ||||||||| | ||||  |||||| |||||  || |||    
T  37562064 tttgatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaaagaaaaaggaagagagagaataagaatatcatgcgagta--tgagag 37562161  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||    
T  37562162 agaaagttgtctaaaagttgtcacataatagttgtacaaatatcatttctc 37562212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 1065560 - 1065417
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    ||||||| ||||||||||  |||||| |||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  |||||||    
T  1065560 tgataaccttgtttttctatcttctttttggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaa 1065463  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||| || ||||| ||||||| | ||||||||| |||||||||||    
T  1065462 gttgtacagaagttgtcacaaattggttgtacaaatatcatttctc 1065417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 30927867 - 30928002
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||| ||||||  || |||||||| |||| ||    
T  30927867 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataagaccatcatatgagta--tgagagagaaagttgtaca 30927964  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| || ||||||| | ||||||||| |||||||||||    
T  30927965 aaaattgtcacaaattggttgtacaaatatcatttctc 30928002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 32185572 - 32185641
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  32185572 tgatatttgtacatccattacatgacaactttgtttttctctcttcttattggtcaaaaacaatggagag 32185641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 41293657 - 41293792
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| |||||||||||||  || |||||||| |||| ||    
T  41293657 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaatggaagagagaagataagaccatcatgtgagta--tgagagagaaagttgtaca 41293754  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | |||||| || |||||||||||    
T  41293755 aaagttgtcacaaattggttgtaaaaatatcatttctc 41293792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 20895900 - 20896053
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||||||||||||||||| |||| ||| || |||||||| ||||||||  ||||||||||||||||||       | || |||||||| |||| ||||    
T  20895900 tgatatttgtacatccatttcatgacaaccttatttttctctcttcttatcagtcaaaaacaatggagagacaaaaaggaaaagagaggataagaccatc 20895999  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaa 167  Q
    |||||||||  || |||||||| |||| | ||| || ||||||||| |||||||||    
T  20896000 atgtgagta--tgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaa 20896053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 19723142 - 19723263
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||| ||||||||||||||||||       | ||||||||||| |||| |||||||||||||    ||||||||| |||| ||    
T  19723142 ttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagta----tgagagaaagttgtaca 19723237  T
Q  142 aaagttatcacaaaatagttgtacaa 167  Q
    |||||| ||||||| | |||||||||    
T  19723238 aaagttgtcacaaattggttgtacaa 19723263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 10344410 - 10344323
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||||||||||| ||||||||||||||| |  ||||||| |||||||||| |||| | ||||||| ||||||| ||||||||||||    
T  10344410 aagagagaggaaaagagcatcatgtgagtatgag--agagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctca 10344323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 14228793 - 14228710
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||| | |||| ||||||||||||||| |  ||||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  14228793 aagagagagaataagaacatcatgtgagtatgag--agagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 20288668 - 20288533
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| ||||||||||||||||||||||||||||       | ||||||||||| || | ||||| |||||||  || ||||||||  ||| ||    
T  20288668 ttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataaaaccatcacgtgagta--tgagagagaaagatgtaca 20288571  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  20288570 aaagttgtcacaaattggttgtacaaatatcatttctc 20288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 21075297 - 21075162
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| ||||||||||||||||||||||||||||       | ||||||||||| || | ||||| |||||||  || ||||||||  ||| ||    
T  21075297 ttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagaggataaaaccatcacgtgagta--tgagagagaaagatgtaca 21075200  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  21075199 aaagttgtcacaaattggttgtacaaatatcatttctc 21075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 43186415 - 43186298
Alignment:
Q  58 ttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaat 157  Q
    ||||||||||||||||||||||||         |||||| |||| |||| ||||||||||||||| |  ||||||| |||| ||||| ||||||||||||    
T  43186415 ttattggtcaaaaacaatggagagagaaaaatgaagagataggataagaccatcatgtgagtatgag--agagaaagttgtacaaaaattatcacaaaat 43186318  T
Q  158 agttgtacaagtatcatttc 177  Q
    | |||||||| |||||||||    
T  43186317 aattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 181
Target Start/End: Complemental strand, 5924997 - 5924808
Alignment:
Q  2 ttatgagtagtgatatttgtacatccatttgatgataact------------ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnng 89  Q
    |||||||||||||||| |||||||||||||||||| ||||            || |||||||| |||||||||||||||||| |||||||||            
T  5924997 ttatgagtagtgatatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaataatggagagagaaaaat 5924898  T
Q  90 taagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
     |||||| | ||||||| |||||||||||||  || |||||||| |||| ||||| |||| | ||||||| ||||| | |||||||||||||    
T  5924897 gaagagatatgaaaagaacatcatgtgagta--tgagagagaaagttgtacaaaaattattataaaatagatgtacgaatatcatttctcat 5924808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 36497809 - 36497661
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||| | ||| ||||||||||| ||| |||||||| ||||||||| |||||       |||||||||| || ||||   |||| ||| |||| |  ||    
T  36497809 tttgataacaaccttgtttttctctctttttattggttaaaaacaatagagagagaaaaagtaagagagaagataagaatgtcatctgaatatgag--ag 36497712  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||| ||||||||||||||||||| |||||||||||    
T  36497711 agaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcatttctc 36497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 36064214 - 36064030
Alignment:
Q  5 tgagtagtgatatttgtacatccatttgatgataact------------ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaa 92  Q
    |||||||||||||||||||||||| ||||||||||||            ||| |||| || ||| |||||||||||||| |||||||||       | ||    
T  36064214 tgagtagtgatatttgtacatccaattgatgataactttggtgacaaacttgcttttatctctttttattggtcaaaaataatggagagaaaaaaaggaa 36064115  T
Q  93 gagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| || ||||   |||||||||||  || |||||||| ||||||||||||| |||||||||  |||||||| |||||||||||    
T  36064114 gagagatgataagaatgtcatgtgagta--tgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcatttctc 36064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 2597083 - 2597230
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||       | |||||| || | ||||   ||||||||||||| | |||    
T  2597083 tttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagaaagaataagaatctcatgtgagtatgagagag 2597182  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
       || |||||||||| |||||||| ||| ||||||||| ||| |||||||    
T  2597183 ---aagttgtccaaaaattatcacataatggttgtacaaatattatttctc 2597230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 13884452 - 13884315
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcc 140  Q
    |||||||||||| |||||||||| |||||||||||||||||       | |||||||| || |||| |||||||| ||||  || |||| ||| || | |    
T  13884452 tttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcatgtaagta--tgagagaaaaagttattc 13884355  T
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||| | ||||||| ||||||||| |||| |||||||    
T  13884354 aaaagttgttacaaaatcgttgtacaaatatcttttctca 13884315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 14531673 - 14531619
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  14531673 agagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttctcat 14531619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 39359899 - 39359743
Alignment:
Q  14 atatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcat 113  Q
    |||||||||||| ||  |||||| ||| ||  ||||||| |||||||||||||||||||||| |||||       | ||||||||||| |||    ||||    
T  39359899 atatttgtacattcaaatgatgacaaccttacttttctcccttcttattggtcaaaaacaatagagagagaaaaaggaagagagaggataagtatgtcat 39359800  T
Q  114 gtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatc 172  Q
    |||||||  || |||||||| |||||||||| || ||| ||||| ||||||||| ||||    
T  39359799 gtgagta--tgagagagaaaattgtccaaaaattgtcagaaaatggttgtacaaatatc 39359743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 36015720 - 36015659
Alignment:
Q  14 atatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaat 75  Q
    ||||||| |||||||||| || |||||||| |||||||| ||| ||||||||||||||||||    
T  36015720 atatttggacatccatttaataataactttatttttctctctttttattggtcaaaaacaat 36015659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 6005075 - 6004937
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||| | ||||||||||||||||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| ||||     
T  6005075 ttttctctcttttcattggtcaaaaacaatggagagaaaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtctaaaaa 6004978  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctcatttatt 186  Q
    || ||||||| ||||||||||| ||||||||||| ||||||    
T  6004977 ttgtcacaaagtagttgtacaaatatcatttctcttttatt 6004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 6656275 - 6656413
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgt----gagagaaatttg 137  Q
    ||||||||||| |||||||||| |||||||||||||| ||         ||||||||||| |||| |||| |||||||||| ||    |||||||| |||    
T  6656275 ttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaagagagaggataagaccatcgtgtgagtatgagtataagagagaaagttg 6656374  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    | |||||||| ||||||| | ||| ||||| ||||||||    
T  6656375 tacaaaagttgtcacaaattggttctacaaatatcattt 6656413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 6736677 - 6736815
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgt----gagagaaatttg 137  Q
    ||||||||||| |||||||||| |||||||||||||| ||         ||||||||||| |||| |||| |||||||||| ||    |||||||| |||    
T  6736677 ttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaagagagaggataagaccatcgtgtgagtatgagtataagagagaaagttg 6736776  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    | |||||||| ||||||| | ||| ||||| ||||||||    
T  6736777 tacaaaagttgtcacaaattggttctacaaatatcattt 6736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 34970344 - 34970207
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| |||||||||||| |||||||||||||||       | ||||||||| | ||||  ||| ||||||||  || |||||||| |||    
T  34970344 aactttgtttttctctcttcttattggttaaaaacaatggagag--aaaaaggaagagagagaataagaatatcttgtgagta--tgagagagaaagttg 34970249  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||| | ||||||   |||||||| |||||||||||    
T  34970248 tcaaaaagttgttacaaaaggattgtacaaatatcatttctc 34970207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 102451 - 102502
Alignment:
Q  125 tgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||    
T  102451 tgagagaaatttgtccaaaagttgtcacaaaatggttgttcaaatatcattt 102502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 35937530 - 35937585
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||    
T  35937530 gagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttctcat 35937585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 28623130 - 28623184
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||| ||||| ||||||||||||| ||| ||||||||| |||||||||||||    
T  28623130 agagaaagttgtcaaaaagttatcacataatggttgtacaaatatcatttctcat 28623184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 35967303 - 35967381
Alignment:
Q  3 tatgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| | ||| || |||||||| ||| || ||| || ||||||||| || ||||||||||||||||||||||||    
T  35967303 tatgagtaggggtatatgaacatccatctgaagacaaccttatttttctcattttttattggtcaaaaacaatggagag 35967381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 37343560 - 37343522
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  37343560 gagtagtgatatttgtacatccaattgatgataactttg 37343522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 40211680 - 40211722
Alignment:
Q  39 actttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  40211680 actttgtttttctctcttcttattggttaaaaacaatggagag 40211722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 5742589 - 5742728
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||       |  |||||||| | || | ||| |||||||||  || |||| ||| |||    
T  5742589 aactttgttgttctctcttctcattggtcaaaaacaatggagagagaaaaagatagagagagaataaaaacataatgtgagta--tgagagataaagttg 5742686  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||||| |  |||||| ||||||||| |||||||||||    
T  5742687 tacaaaagttgtaccaaaatggttgtacaaatatcatttctc 5742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 5925242 - 5925201
Alignment:
Q  2 ttatgagtagtgatatttgtacatccatttgatgataacttt 43  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  5925242 ttatgagtagtgatatatgtacatccatttgatgacaacttt 5925201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 12045601 - 12045724
Alignment:
Q  54 cttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcaca 153  Q
    ||||| ||||||||||||||||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| ||||||| ||||     
T  12045601 cttctcattggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtctaaaagttgtcact 12045698  T
Q  154 aaatagttgtacaagtatcatttctc 179  Q
    |||| ||||||||| |||||||||||    
T  12045699 aaatggttgtacaaatatcatttctc 12045724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 37343427 - 37343374
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| || ||||||| |||||||| ||||||||||||| |||||||||||    
T  37343427 gagagaaagttatccaaaaattatcacataatagttgtacaaatatcatttctc 37343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 37784322 - 37784445
Alignment:
Q  54 cttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcaca 153  Q
    |||||||||||||||| |||||| ||||       ||||||||||| | || | ||| || ||||||  || |||||||| |||| ||||||||||  ||    
T  37784322 cttcttattggtcaaacacaatgaagagagaaaacgtaagagagagaataaaaacataatatgagta--tgagagagaaaattgtacaaaagttatacca 37784419  T
Q  154 aaatagttgtacaagtatcatttctc 179  Q
    |||| ||||||||| |||||||||||    
T  37784420 aaatggttgtacaaatatcatttctc 37784445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 38844802 - 38844863
Alignment:
Q  120 atgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||| |||||||| || || ||||||| ||||||||| ||||||||| |||||||||||||    
T  38844802 atgtgggagagaaagttatctaaaagttgtcacaaaatggttgtacaaatatcatttctcat 38844863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5642313 - 5642365
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||  ||||||| ||||||||||||| ||||||||||||||    
T  5642313 tttgatgacaacttttattttctctcttcttattggtccaaaacaatggagag 5642365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5644254 - 5644306
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||  ||||||| ||||||||||||| ||||||||||||||    
T  5644254 tttgatgacaacttttattttctctcttcttattggtccaaaacaatggagag 5644306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13962105 - 13962025
Alignment:
Q  1 attatgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||| ||||| ||||| | ||||||  ||||||| || |||||||| |||||||||||||||||| ||| |||||    
T  13962105 attaagagtaatgatacttgtataaccattttgtgataacattctttttctctcttcttattggtcaaaaataatagagag 13962025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 23952636 - 23952494
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    |||||| ||||||||||||  || |||||||||||||| |||||||||       | || ||||| || |||| || ||||||||||||    | |||||    
T  23952636 tgataattttgtttttctctttttttattggtcaaaaataatggagagagaaaa-gaaatagagaagataagaacaacatgtgagtatgaa--aaagaaa 23952540  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||| ||||||| ||||||||||| |||||||| |||||||||||    
T  23952539 attgtacaaaagtcatcacaaaataattgtacaaatatcatttctc 23952494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 26294245 - 26294189
Alignment:
Q  123 tgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| | |||||||||||    
T  26294245 tgtgagagaaaattgtcaaaaagttgtcacaaaatggttgtaccaatatcatttctc 26294189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 26307502 - 26307446
Alignment:
Q  123 tgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| | |||||||||||    
T  26307502 tgtgagagaaaattgtcaaaaagttgtcacaaaatggttgtaccaatatcatttctc 26307446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 39021470 - 39021514
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||    
T  39021470 ttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctc 39021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 39258982 - 39259030
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||  ||||||||||| ||||||||| ||||||||||||||||||    
T  39258982 atgataatcttgtttttctctcttcttattagtcaaaaacaatggagag 39259030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 40459780 - 40459836
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||| |||| ||||||||||  |||||||||||||||| | ||||||||||||    
T  40459780 gagagaaagttgtacaaaagttataccaaaatagttgtacaaatttcatttctcatt 40459836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 30129557 - 30129506
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggaga 80  Q
    |||| ||| ||||||| ||||||| |||||||||||||||||| ||||||||    
T  30129557 tttggtgacaactttgcttttctctcttcttattggtcaaaaataatggaga 30129506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30129597 - 30129554
Alignment:
Q  1 attatgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||    
T  30129597 attatgagcagtgatatttgtacatccaattgatgacaactttg 30129554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 33817292 - 33817253
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  33817292 ttgtttttctctctttttattggtcaaaaacaatggagag 33817253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8233425 - 8233471
Alignment:
Q  35 gataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||||||||    
T  8233425 gataaccttgttgttctctcttctcattggtcaaaaacaatggagag 8233471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 13267027 - 13267061
Alignment:
Q  47 tttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||| ||||||||||||||||||||||||||||    
T  13267027 tttctctcttcttattggtcaaaaacaatggagag 13267061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 40842064 - 40842014
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||||||||||| | ||||||||| |||||||||||    
T  40842064 agaaagttgtcaaaaagttatcacaaagtggttgtacaaatatcatttctc 40842014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 10591892 - 10591945
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||| |||| ||||||||||   ||||||||||||||| ||||||||||||    
T  10591892 agagaaagttgtacaaaagttatataaaaatagttgtacaaatatcatttctca 10591945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 27776131 - 27776094
Alignment:
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  27776131 aaagttatcacaaaatagttgtacaaatattatttctc 27776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 32674250 - 32674303
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||| ||||||||||  |||||| ||||||||| |||||||||||    
T  32674250 gagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 32674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 35595358 - 35595223
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||| ||||||| |||||||||||| ||||||||||||||          |||||| |  | |||| ||||||||||||||| |  ||    
T  35595358 tttggtgacaaccttgcttttctctcttcttattggtaaaaaacaatggagaaagaaaaatgaagagaaataacaagaacatcatgtgagtatgag--ag 35595261  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtaca 166  Q
    ||||| ||||| |||| | |||||||||||||||||||    
T  35595260 agaaagttgtcaaaaaatcatcacaaaatagttgtaca 35595223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 40380334 - 40380281
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||| |||||||| ||| ||||||| ||||||| |||||||||||    
T  40380334 gagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcatttctc 40380281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 41520007 - 41519954
Alignment:
Q  29 tttgatgataactttgtttttc-tcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||| ||||||||| || ||| ||||||||||||||||||||||||    
T  41520007 tttggtgataaccttgtttttcctctctttttattggtcaaaaacaatggagag 41519954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 42012608 - 42012661
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||||||| ||| |||||||| || |||||||||||    
T  42012608 gagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttctc 42012661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 45101449 - 45101396
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||    
T  45101449 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 45101396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 5359470 - 5359434
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  5359470 tttttctctctttttattggtcaaaaacaatggagag 5359434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 6825216 - 6825252
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| |||||||||||| |||||||||||||||    
T  6825216 tttttctctcttcttattggttaaaaacaatggagag 6825252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 8888400 - 8888348
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||| |||||||| ||||||||||| |||||||||||||||    
T  8888400 tttggtgacaaccttgattttctcatttcttattggttaaaaacaatggagag 8888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 9046285 - 9046249
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| |||||||||||||| |||||||||||||    
T  9046285 tttttctcccttcttattggtcagaaacaatggagag 9046249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 21273728 - 21273784
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||| ||| ||||| | ||||| ||||||||| ||||||||| ||||||||||||||    
T  21273728 gagataaaattgtcaagaagttgtcacaaaatggttgtacaaatatcatttctcatt 21273784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 24946134 - 24946098
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  24946134 tttttctcacttttcattggtcaaaaacaatggagag 24946098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 28623048 - 28623100
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||| |||||||  |||||||||||||||||||||||||||    
T  28623048 tttggtgacaaccttgcttttctcttttcttattggtcaaaaacaatggagag 28623100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 33511744 - 33511780
Alignment:
Q  139 ccaaaagttatcacaaaatagttgtacaagtatcatt 175  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  33511744 ccaaaagttttcacaaaatagttgtacaaatatcatt 33511780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 37873124 - 37873176
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| ||||||||||| ||||| ||| ||||| |||||||||||    
T  37873124 agagaaagttgtcaaaaagttatcataaaatggttttacaaatatcatttctc 37873176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 38504306 - 38504266
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  38504306 tttgtttttctctcttttgattggtcaaaaacaatggagag 38504266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 38844734 - 38844766
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||||||||||||||||    
T  38844734 tctctcttcttattggtcaaaaacaatggagag 38844766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 41675308 - 41675344
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| |||||||||||||| |||||||||    
T  41675308 tttttctcactttttattggtcaaaaataatggagag 41675344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 41935279 - 41935307
Alignment:
Q  151 acaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||||||||||||||||||    
T  41935279 acaaaatagttgtacaagtatcatttctc 41935307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 44380632 - 44380692
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttatt 186  Q
    |||||||| ||||  ||| ||| ||||||||| ||||||||| ||||||||||| ||||||    
T  44380632 gagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcatttctcttttatt 44380692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 1790164 - 1789994
Alignment:
Q  4 atgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaa 103  Q
    |||||||||||||| |||||||| |||| |||| ||| || | ||||||  |||||||||||||||| ||||| ||||       | |||||||||||||    
T  1790164 atgagtagtgatatatgtacatcaatttcatgacaaccttatgtttctcttttcttattggtcaaaatcaatgaagagagaaaaaggaagagagaggaaa 1790065  T
Q  104 agatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||| ||||||||||||||| |  ||||||| ||||| ||||||| || |||||||||||||||| ||||||||    
T  1790064 agaacatcatgtgagtatgag--agagaaagttgtcaaaaagttgtcgcaaaatagttgtacaaatatcattt 1789994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 33050318 - 33050178
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| |||||||||||||||||||||| |||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  33050318 ttgtttctctctcttcttattggtcaaaaacaatagagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtaca 33050221  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||    
T  33050220 aaagttgtcacaaaatggttgtacaaatatcatttctcattta 33050178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 42431858 - 42431723
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| ||||||||||||||||||||    | ||||| |||| ||    
T  42431858 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagatcatcatgtgagtatgat--atagaaaattgtaca 42431761  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||| ||| |||| || |||||||||||    
T  42431760 aaagttatcacaaattaggtgtataaatatcatttctc 42431723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 30864353 - 30864488
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||||||||  |||||||||||||||||||||||||||       | ||||||||||| |||| |||||| |||||||| |  ||||||| |||| ||    
T  30864353 ttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatatgagtatgag--agagaaagttgtaca 30864450  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  30864451 aaagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 44175677 - 44175544
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||  ||||||||||||||||||||||||||||       | |||||||| ||||| | ||||||||||||||| |  ||||||| |||| |||||    
T  44175677 tttttctttcttcttattggtcaaaaacaatggagagagaaaaagaaagagagatgaaaaaaccatcatgtgagtatgag--agagaaagttgtacaaaa 44175580  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||||||||  |||||||| ||| ||||||||    
T  44175579 gttatcacaaaatgattgtacaaatattatttctca 44175544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 27164769 - 27164908
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| ||||||||||||||||||||||||| |        | ||||||||||| |||| |||||||||||||  || |||||||| ||     
T  27164769 aactttgtttttctctcttcttattggtcaaaaacaatggaaaaagaaaaaggaagagagaggataagaccatcatgtgagta--tgagagagaaagtta 27164866  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||||| ||||||| |  |||||||| |||||||||||    
T  27164867 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 27164908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 29162215 - 29162351
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| |||||| |||||||||||||||||       | ||||||||||| ||||||||||| ||||||  || |||||||| || | ||    
T  29162215 ttgtttttctctctttttattgatcaaaaacaatggagagagaaaaagaaagagagaggataagatcatcatatgagta--tgagagagaaagttataca 29162312  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||| ||||||| |  |||||||| ||||||||||||    
T  29162313 aaagttgtcacaaattgattgtacaaatatcatttctca 29162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38990276 - 38990198
Alignment:
Q  2 ttatgagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggaga 80  Q
    ||||||| | ||||||||| ||||||||||||||| ||| |||||||||||  || |||||||||||||||||||||||    
T  38990276 ttatgaggaatgatatttggacatccatttgatgacaaccttgtttttctctatttttattggtcaaaaacaatggaga 38990198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 44511275 - 44511139
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcc 140  Q
    ||||||||||||  ||||||||||||||||||||||| |||       | ||||||||| | |||| |||||||||||||||    ||||||| |||| |    
T  44511275 tttgtttttctcttttcttattggtcaaaaacaatggggagaaaaaaaggaagagagagaataagaacatcatgtgagtatgaa--agagaaagttgtac 44511178  T
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||||||| ||||||| | |||||||||||    
T  44511177 aaaagttgtcacaaaatggttgtacgaatatcatttctc 44511139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 26041449 - 26041365
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatg 122  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       | ||||||||| | |||| |||||||||||||||    
T  26041449 aactttgtttttctctcttcttattggtcaaaaacaatggagagaaaaaaaggaagagagagaataagaacatcatgtgagtatg 26041365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 49025215 - 49025331
Alignment:
Q  7 agtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaaga 106  Q
    |||||||||||||||| ||| ||||||||| || |||||||||||| ||||||| | ||||||||||| ||||||        |||||||||| |||| |    
T  49025215 agtagtgatatttgtatatcaatttgatgacaattttgtttttctctcttcttaattgtcaaaaacaacggagagataaaaaataagagagagaaaaata 49025314  T
Q  107 tcatcatgtgagtatgt 123  Q
     |||||||| |||||||    
T  49025315 acatcatgtaagtatgt 49025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 17500845 - 17500695
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||||||||||||         ||||||||| | ||||  || |||||||||  || |||    
T  17500845 tttgatgataactttcattttctctcttcttattggtccaaaacaatggagagagaaaaatgaagagagagaataagaatataatgtgagta--tgagag 17500748  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    | ||| ||||| ||||||||| | ||| | ||||||||| |||||||||||||    
T  17500747 ataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctcat 17500695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 17552369 - 17552519
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||||||||||||         ||||||||| | ||||  || |||||||||  || |||    
T  17552369 tttgatgataactttcattttctctcttcttattggtccaaaacaatggagagagaaaaatgaagagagagaataagaatataatgtgagta--tgagag 17552466  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    | ||| ||||| ||||||||| | ||| | ||||||||| |||||||||||||    
T  17552467 ataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctcat 17552519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 25614744 - 25614898
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||||||||| |||||||||||| |||||||||||||||       |||| |||||  | ||||   |||||||||||  ||  ||    
T  25614744 tttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatggagagagaaaaagtaaaagagataataagaatgtcatgtgagta--tgaaag 25614841  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    ||||| |||| |||||||||||| ||||| | ||||||| |||||||||||| ||||    
T  25614842 agaaagttgtgcaaaagttatcaaaaaatggatgtacaaatatcatttctcaattat 25614898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 48087030 - 48086955
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| |||||| |||||||| ||||||||| ||  |||||| ||||  |||||||||||||||||||||||||||    
T  48087030 gagtattgatatatgtacatctatttgatgacaatcttgtttctctcttttcttattggtcaaaaacaatggagag 48086955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 178
Target Start/End: Original strand, 10014890 - 10015025
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcc 140  Q
    |||||||||||| ||| ||||||||||||||||||||||||         | |||| |||| ||||   |||||||||||  || |||| ||| ||||||    
T  10014890 tttgtttttctctctttttattggtcaaaaacaatggagagagaaaaaagatgagataggataagaatgtcatgtgagta--tgagagaaaaagttgtcc 10014987  T
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    |||  |||||| ||||||||||||||| ||||||||||    
T  10014988 aaatattatcataaaatagttgtacaaatatcatttct 10015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 20406680 - 20406541
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    |||||||||||| || ||| |||||||||||||| ||  |||||        |||||||||||| || | ||||||||||||||| |  | ||||| |||    
T  20406680 aactttgtttttttctctttttattggtcaaaaataacagagagaggaaaattaagagagaggataaaaacatcatgtgagtatgag--aaagaaagttg 20406583  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||| |||||| || ||||||||| |||||||||||    
T  20406582 tcaaaaagttgtcacaagatggttgtacaaatatcatttctc 20406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 38978627 - 38978492
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||| ||||||||||||||||||       | ||||||||||| |||  ||||||||||  || ||  ||||||| |||| ||    
T  38978627 ttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaagagagaggataagtccatcatgtga--atatgaaagagaaagttgtaca 38978530  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||| | ||| ||||||| | ||||| |||||    
T  38978529 aaagttatcatagaatggttgtactaatatcagttctc 38978492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 39369441 - 39369298
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    |||||||||||||||  ||||||||||| |||||||||||||||       | ||||||||| | ||||  ||| ||||||||  || |||| ||| ||     
T  39369441 aactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaagagagagaataagaaaatcttgtgagta--tgggagaaaaagtta 39369344  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    || ||||||| | ||||||  ||||||||| |||||||||||||||    
T  39369343 tcaaaaagttgttacaaaagggttgtacaaatatcatttctcattt 39369298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 48522327 - 48522156
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||| ||||||||| ||| |||||| |||| ||||||||| ||||  ||| |||||||||||||||||| |||||       | ||||||||| | ||     
T  48522327 gagtaatgatatttgaacaaccatttcatgacaactttgttgttctttcttgttattggtcaaaaacaatagagagagaaaaaggaagagagagaataat 48522228  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | ||| |||||||||  || |||| ||| ||||| ||||||| |   ||||| ||||||||| |||||||||||    
T  48522227 aacataatgtgagta--tgagagaaaaagttgtctaaaagttgtacaaaaatggttgtacaaatatcatttctc 48522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 2346998 - 2347132
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||  ||| ||||||||||||| ||||||||||         ||||||||||| || |  |||||||||||||| |  ||||||| |||| | |||    
T  2346998 tttttctttcttgttattggtcaaaagcaatggagagagaaaaaagaagagagaggataaaactatcatgtgagtatgag--agagaaagttgtaccaaa 2347095  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||| ||||||||| ||||||||| |||||||||||||    
T  2347096 gttgtcacaaaatggttgtacaaatatcatttctcat 2347132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 37325755 - 37325889
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| |||||||| |||||||||||||||         ||||| ||||| ||||  ||||||||||||  ||  ||||||| |||| ||    
T  37325755 ttgtttttctctctttttattggttaaaaacaatggagagagaaaaaagaagagtgaggataagactatcatgtgagta--tgaaagagaaaattgtaca 37325852  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    |||||| ||||||| | ||||||||| ||||||||||    
T  37325853 aaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 37385156 - 37385310
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||| |||||  ||||||||||||||||||||| |||||       |||| |||||  | ||||   ||||||||||||| |  ||    
T  37385156 tttggtgacaaccttgttcttctcttttcttattggtcaaaaacaattgagagagaaaaagtaaaagagataataagaatgtcatgtgagtatgag--ag 37385253  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    ||||| |||| |||||||| ||| ||||||||||||||| |||||||| || |||||    
T  37385254 agaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcatttatcttttat 37385310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 29763880 - 29763829
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||| |||| |||||||||||||||||| ||||||||| ||||||||||||    
T  29763880 agaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctca 29763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 35005035 - 35005074
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  35005035 ttgtttttctctcttcttattggtcaaaaacaatggagag 35005074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 42060805 - 42060656
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaa-gagagaggaaaagatcatcatgtgagtatgtgtga 127  Q
    |||| ||| |||||||  |||||| ||| | ||||||||||||||||||||||        ||| ||| ||||| || | ||||||||||||||| |  |    
T  42060805 tttggtgacaactttgcctttctctcttttgattggtcaaaaacaatggagagaaaaaaaataaagagggaggataacaacatcatgtgagtatgag--a 42060708  T
Q  128 gagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||| |||||||||  |||||| ||||||||| |||||||||||    
T  42060707 gagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctc 42060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 116766 - 116626
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||  ||| ||||| ||||||||||||||||||         |||||| | || |||| ||||||||||||||| |  ||||||| |||| |     
T  116766 ttgtttttctttctttttattcgtcaaaaacaatggagagagaaaaatgaagagaaaagataagaccatcatgtgagtatgag--agagaaagttgtacc 116669  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    ||||||  ||||||||||||||| || ||||||||||| ||||    
T  116668 aaagttggcacaaaatagttgtataaatatcatttctctttta 116626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 45607156 - 45607024
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||||||| | ||||||||||||||||||||||       | ||||||| | | || | ||| |||||||||  || |||||||| ||||| | ||    
T  45607156 tttttctcacttttcattggtcaaaaacaatggagagagaaaaaggaagagagtgaataaaaacataatgtgagta--tgagagagaaagttgtcaagaa 45607059  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||| ||| ||||||| |||||||||||    
T  45607058 gttgtcacaaagtagatgtacaaatatcatttctc 45607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 48057432 - 48057470
Alignment:
Q  41 tttgtttttctcacttcttattggtcaaaaacaatggag 79  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  48057432 tttgtttttctctcttcttattggtcaaaaacaatggag 48057470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 19426633 - 19426580
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||||| ||||||||| |||||||||||    
T  19426633 gagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 40693546 - 40693599
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  40693546 gagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 40693599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 43079650 - 43079703
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||||||||| |||||||||| | ||||||||| |||||||||||    
T  43079650 gagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 43079703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 45556059 - 45555974
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| || | || |||||||||||| |  | ||||| ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  45556059 aagagagaggataaaaacaacatgtgagtatgag--atagaaagttgtc-aaaagttgtcacaaaatagttgtacatgtatcatttctc 45555974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 10161853 - 10161905
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||||||||||||||  ||| ||||||||||||||||||||||||    
T  10161853 tttgttgacaactttgtttttctttctttttattggtcaaaaacaatggagag 10161905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 17157281 - 17157229
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  17157281 tttggtgataactttgcttttctctcttttgattggtcaaaaacaatggagag 17157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 48866869 - 48867003
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| | ||| ||||||||||||||||||       | ||||||||| | | ||  || |||||||||||||  ||||||| ||||| ||||    
T  48866869 tttttctctcttttcattagtcaaaaacaatggagagagaaaaaggaagagagagaataggagtataatgtgagtatgtg--agagaaagttgtcaaaaa 48866966  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||| ||||||| | | ||||||| |||||||||||||    
T  48866967 gttgtcacaaagtggctgtacaaatatcatttctcat 48867003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 1838346 - 1838385
Alignment:
Q  5 tgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  1838346 tgagtagtgatatttgtacatccaattgatgacaactttg 1838385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 2005868 - 2005825
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||    
T  2005868 aactttgtttttctctcttcttattggttaaaaacaatgcagag 2005825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 2600466 - 2600509
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||    
T  2600466 aactttgttgttctctcttctcattggtcaaaaacaatggagag 2600509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 26153698 - 26153644
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||||    
T  26153698 gagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcatttctcat 26153644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 32315961 - 32315922
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  32315961 ttgtttttctctcttcttattggtcaaaaacaatagagag 32315922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 40760789 - 40760836
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||| |||| ||||||||||||||||||||||||| || ||||||||    
T  40760789 agaaagttgttcaaaagttatcacaaaatagttgtataaatatcattt 40760836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 8742566 - 8742528
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  8742566 gagtagtgatatttgtacatccaattgatgacaactttg 8742528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 12141952 - 12141894
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    |||| ||| |||| |||||||||||||||||| ||||||||| ||| ||||||| ||||    
T  12141952 gagaaaaagttgttcaaaagttatcacaaaatggttgtacaaatatgatttctctttta 12141894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 37969984 - 37969930
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| |||| |||||||| |  |||||||||||||||| ||||||||||||    
T  37969984 gagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcatttctca 37969930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 4971343 - 4971290
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||| ||||||||| ||||||||| |||||||||||    
T  4971343 gagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 22638902 - 22638959
Alignment:
Q  127 agagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||||||||||| |||||||| ||| ||||||| ||| ||| |||||||||||||||    
T  22638902 agagaaatttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctcattt 22638959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 23845016 - 23844959
Alignment:
Q  128 gagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    |||||| |||||  ||| |||| ||||||| ||||||||| |||||||||||||||||    
T  23845016 gagaaaattgtcacaaaattattacaaaattgttgtacaaatatcatttctcatttat 23844959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 28548239 - 28548292
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||| |||||||| |  |||||||||||||||| |||||||||||    
T  28548239 gagagaaagttgtacaaaagttgtaccaaaatagttgtacaaatatcatttctc 28548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 33881690 - 33881776
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| || | ||||||||||||||| |  ||||||| || || |||||||||  |||||| |||||| || |||||||||||    
T  33881690 aagagagaggataataacatcatgtgagtatgag--agagaaagttatcaaaaagttataccaaaatggttgtataaatatcatttctc 33881776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 38023442 - 38023495
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| |||| |||||||||| | ||||||||| |||||||||||    
T  38023442 gagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctc 38023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 42118598 - 42118671
Alignment:
Q  7 agtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggaga 80  Q
    |||| ||||| ||||||| ||||||  ||| ||| || || ||||| |||||||||||||||||||||| ||||    
T  42118598 agtaatgataattgtacaaccattttgtgacaaccttcttcttctctcttcttattggtcaaaaacaatagaga 42118671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 49167882 - 49167927
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||| |||| ||||||||||||| |||||||| ||||||||||||    
T  49167882 ttgtctaaaaattatcacaaaataattgtacaaatatcatttctca 49167927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 1814340 - 1814380
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||| || |||||||||||||||| |||||||||||||    
T  1814340 aaaagttgtcgcaaaatagttgtacaaatatcatttctcat 1814380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 8742531 - 8742479
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||||||||||| |||||||||| ||| |||||||||||||    
T  8742531 tttggtgacaaccttgtttttctctcttcttattgatcataaacaatggagag 8742479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 16567368 - 16567316
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| ||||||||| | ||||| ||||||||| |||||||||||    
T  16567368 agagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16598294 - 16598346
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| ||||||||| | ||||| ||||||||| |||||||||||    
T  16598294 agagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 21588866 - 21588902
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  21588866 tttttctctcttctcattggtcaaaaacaatggagag 21588902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 25427849 - 25427817
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||||||||||||||||    
T  25427849 tctctcttcttattggtcaaaaacaatggagag 25427817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 25887715 - 25887679
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  25887715 tttttctcacttttcattggtcaaaaacaatggagag 25887679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 35857581 - 35857500
Alignment:
Q  93 gagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||| |||| |||||||||||||  || |||| ||| |||| ||||| |||||| ||| || |||||||| ||||||||    
T  35857581 gagagaggataagaccatcatgtgagta--tgagagataaagttgtacaaaaattatcataaattaattgtacaaatatcattt 35857500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 37351929 - 37351965
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  37351929 tttttctctctttttattggtcaaaaacaatggagag 37351965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 47193059 - 47193023
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  47193059 tttttctcacttttcattggtcaaaaacaatggagag 47193023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 47530214 - 47530266
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||| ||||||||||  |||||||||||  |||||||||||||||    
T  47530214 tttggtgataaccttgtttttctttcttcttattggctaaaaacaatggagag 47530266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 52454024 - 52454165
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    |||||||||| |||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||| || |||||||| |||    
T  52454024 aactttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatatgagagagaaagttg 52454123  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
      |||||||| ||||||| |  |||||||| |||||||||||    
T  52454124 aacaaaagttgtcacaaattgattgtacaaatatcatttctc 52454165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 11327243 - 11327106
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| |||||||||||||||||||||| |||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  11327243 ttgtttctctctcttcttattggtcaaaaacaatagagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtaca 11327146  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||| ||||||||| ||||||||| |||||||||||||    
T  11327145 aaagttgtcacaaaatggttgtacaaatatcatttctcat 11327106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 32931854 - 32931989
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||| |||| |||| ||||||||||||||| |  ||||||| |||| ||    
T  32931854 ttgtttttctctcttcttattggtcaaaaacaatggagagagagaaagaaagagaaaggataagaccatcatgtgagtatgag--agagaaagttgtaca 32931951  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  32931952 aaagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 40419545 - 40419712
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||  ||| |||||||||||||||||| |||||       | ||||||||||| |||    
T  40419545 gagtagtgatatttgtacatccaattgatgacaacattgtttttctatctttttattggtcaaaaacaatagagag--agaaaggaagagagaggataag 40419642  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
    |  |||||||||  || || |||||||| ||||| |||| ||||||||||||  |||||||| ||||||||||    
T  40419643 a-aatcatgtga--atatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 50879734 - 50879593
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||       | |||||||| || |||| ||||||||||||||| |  ||||||| |||    
T  50879734 aactttgttgttctctcttcttattggtcaaacacaatggagagagaaaaaggaagagagaagataagaccatcatgtgagtatgag--agagaaagttg 50879637  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    | |||||||| ||||||  ||||||||||| |||||||||||||    
T  50879636 tacaaaagttgtcacaatttagttgtacaaatatcatttctcat 50879593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3069511 - 3069645
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||  || |||||||| |||| |     
T  3069511 ttgtttttctctcttcttattggtcaaaaacaatggagagagataaaggaagagagaggataagaccatcatgtgagta--tgagagagaaagttgtac- 3069607  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  3069608 aaagttgtcacaaattggttgtacaaatatcatttctc 3069645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 36819091 - 36818956
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||         ||||||||||| |||| ||| ||||||||||| |  ||||||| |||| ||    
T  36819091 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaagagagaggataagaccatgatgtgagtatgag--agagaaagttgtaca 36818994  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  36818993 aaagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 28884648 - 28884576
Alignment:
Q  9 tagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||||||||||| ||||| | ||||||| ||||||| ||||||||||||||||||||||||||||    
T  28884648 tagtgatatttgtacatccaattgatcacaactttgattttctctcttcttattggtcaaaaacaatggagag 28884576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 13159796 - 13159659
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| |||||| ||||||  || |||||||| |||| ||    
T  13159796 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagacgataagaccatcatatgagta--tgagagagaaagttgtaca 13159699  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||| ||||||| || |||||||  |||||||||||||    
T  13159698 aaagttgtcacaaattaattgtacagatatcatttctcat 13159659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 41877836 - 41877683
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| |||||||||||||||  || | ||||||||||||||||||||||       | ||||||||||| || | ||||||||||||||| |  ||    
T  41877836 tttggtgacaactttgtttttctcttttttgattggtcaaaaacaatggagagagaaaaaggaagagagaggataataacatcatgtgagtatgag--ag 41877739  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    ||||| ||||| ||||||| |  |||||| ||||||||| ||||||||||||||||    
T  41877738 agaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcattta 41877683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 2482610 - 2482746
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||||| |||||||||||||||       ||||||||||| | || | |||||||||| ||  || |||||||| |||| ||    
T  2482610 ttgtttttctctcttcttattggttaaaaacaatggagagagaaaaagtaagagagagaataacaacatcatgtgatta--tgagagagaaagttgttca 2482707  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||| ||||||||| | ||||||| ||||||||||||    
T  2482708 aaagttgtcacaaaatggatgtacaaatatcatttctca 2482746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 20714375 - 20714243
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||  ||||||||||||||||||||||||||||       | ||||||||||| |||| ||||||||||||||| |  ||||||| |||| || ||    
T  20714375 tttttctatcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatgag--agagaaagttgtacagaa 20714278  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||| | ||||||||| |||||||||||    
T  20714277 gttgtcacaaattggttgtacaaatatcatttctc 20714243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 30400092 - 30400227
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | ||||||||||| |||| |||   |||||||  || |||||||| |||| ||    
T  30400092 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatggcgtgagta--tgagagagaaagttgtaca 30400189  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  30400190 aaagttgtcacaaatttgttgtacaaatatcatttctc 30400227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 50652536 - 50652388
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||||||| || |||| ||||||| ||||||||||||||||||||||||||||       | ||||||||||| || |   |||||||||||  || ||     
T  50652536 tttgatgacaattttgcttttctctcttcttattggtcaaaaacaatggagagagtaaaaggaagagagaggataataatgtcatgtgagta--tgagat 50652439  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||| |||||||||| ||| ||||| ||||||||| |||||||||||    
T  50652438 ataaatttatccaaaagttgtcataaaatggttgtacaaatatcatttctc 50652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 1295385 - 1295328
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1295385 gagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctcattt 1295328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 34021395 - 34021534
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| |||||||||||||||||||||| |||||       | ||||||||||| |||| |||||||| ||||  || || ||||| |||    
T  34021395 aactttgtttttctctcttcttattggtcaaaaacaatagagagagaaaaaggaagagagaggataagaccatcatgtaagta--tgagaaagaaagttg 34021492  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
      |||||||| ||||||| |  |||||||| |||||||||||    
T  34021493 gacaaaagttgtcacaaattgattgtacaaatatcatttctc 34021534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 38692227 - 38692301
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||||||| |||||| |||| |||||| |||||||  |||||||||||||||||||||| |||||    
T  38692227 gagtagtgatatttgtacaaccattt-atgacaactttctttttctatcttcttattggtcaaaaacaatagagag 38692301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 50280014 - 50280159
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaa 132  Q
    |||| ||| ||||||||||| ||||||||| ||||||||||||||||||       | ||||||||||| |||  ||||||||||  || ||  ||||||    
T  50280014 atgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaagagagaggataagtccatcatgtga--atatgaaagagaa 50280111  T
Q  133 atttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    | |||| |||||||| ||| | ||| ||||||||| ||||||||||||    
T  50280112 agttgtacaaaagttgtcatagaatggttgtacaaatatcatttctca 50280159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 7153 - 7285
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    ||||||||  || ||||||||||||||||||||||||       | ||||||||||| ||||  || ||||||||||| |  ||||||| ||||||||||    
T  7153 tttttctctttttttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaatataatgtgagtatgag--agagaaagttgtccaaaa 7250  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||| |||||  |||||||| |||||||||||    
T  7251 gttgtcagaaaatgattgtacaaatatcatttctc 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3957954 - 3958089
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||  ||||||||| ||||||||||||||||||       | ||||||||||| |||| |||||||||||||  || |||||||| |||  ||    
T  3957954 ttgtttttctatcttcttatttgtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagta--tgagagagaaagttgcaca 3958051  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     ||||| ||||||| |  |||||||| |||||||||||    
T  3958052 gaagttgtcacaaattgattgtacaaatatcatttctc 3958089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 53102838 - 53102973
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||| |||||||||||||||||       | ||||||||| | |||| |||||||||||||  || |||||||| ||||  |    
T  53102838 ttgtttttctctcttcttattgatcaaaaacaatggagagaaaaaaaggaagagagagaataagaccatcatgtgagta--tgagagagaaagttgtata 53102935  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| |  | |||||| |||||||||||    
T  53102936 aaagttgtcacaaattgatcgtacaaatatcatttctc 53102973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 7949953 - 7949788
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatc 111  Q
    |||||| ||||||||||||| |||| |||||| |||||||| ||| | |||||| ||||| |||||||||       | ||||| ||||| ||   ||||    
T  7949953 tgatatgtgtacatccatttaatgacaactttatttttctctcttttgattggttaaaaaaaatggagagagaaaaaggaagagtgaggataa---catc 7949857  T
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||||  || || ||||| ||||| ||||||| |  |||||| ||||||||| ||||||||||||||    
T  7949856 atgtgagta--tgagaaagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcatt 7949788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 28263684 - 28263600
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatg 122  Q
    |||||| |||||||  ||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||||    
T  28263684 aactttatttttctttcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaggataagaccatcatgtgagtatg 28263600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 8254155 - 8254027
Alignment:
Q  49 tctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagtta 148  Q
    |||| |||||||| ||  |||||||||||||||       | |||||||| || |||| ||||||||||||||| |  ||||||| |||| | ||||||     
T  8254155 tctctcttcttatcggctaaaaacaatggagagagaaaaaggaagagagatgataagaccatcatgtgagtatgag--agagaaagttgtaccaaagttg 8254058  T
Q  149 tcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||| ||||||||| |||||||||||    
T  8254057 tcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 45150284 - 45150337
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||||||||||||||    
T  45150284 gagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcatttctc 45150337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 47849802 - 47849672
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| | ||||||||||||||||||||||       | ||||||||| | ||||  || ||||||||||||   ||||||| ||||| ||||    
T  47849802 tttttctctcttttcattggtcaaaaacaatggagagaaaaa--gaaagagagagaataagagtataatgtgagtatgta--agagaaagttgtcaaaaa 47849707  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||||||||||| ||||||||| |||||||||||    
T  47849706 attatcacaaaatggttgtacaaatatcatttctc 47849672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 462419 - 462475
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||| ||||| ||||||| ||||||||| ||||||||| ||||||||||||||    
T  462419 gagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttctcatt 462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 35756128 - 35756076
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  35756128 tttggtgacaactttgtttttctctcttcttattggttaaaaacaatggagag 35756076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 54233424 - 54233476
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  54233424 tttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagag 54233476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 14207507 - 14207378
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| ||||||||||||||||||||||||         ||||||||| | ||||  || |||||||||  || |||||||| ||||| |||     
T  14207507 tttttctctctttttattggtcaaaaacaatggagagagatgaaagaagagagagaataagagtataatgtgagta--tgagagagaaagttgtcaaaag 14207410  T
Q  145 gttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||||| | ||||||||| ||||||||    
T  14207409 gttatcacaaagtggttgtacaaatatcattt 14207378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 14215255 - 14215126
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||| ||||||||||||||||||||||||         ||||||||| | ||||  || |||||||||  || |||||||| ||||| |||     
T  14215255 tttttctctctttttattggtcaaaaacaatggagagagatgaaagaagagagagaataagagtataatgtgagta--tgagagagaaagttgtcaaaag 14215158  T
Q  145 gttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||||||||| | ||||||||| ||||||||    
T  14215157 gttatcacaaagtggttgtacaaatatcattt 14215126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 54379445 - 54379402
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  54379445 aactttgtttttctctcttcttattggtcaaaaataatggagag 54379402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 44855383 - 44855251
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| |||||||||||| ||||| |||||||||       | |||||| | || |||| |||| | |||||||| |  ||||||| || | |||||    
T  44855383 tttttctctcttcttattggttaaaaaaaatggagagagaaaaaggaagagaaatgataagaacatcgtctgagtatgag--agagaaagttatacaaaa 44855286  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||||||||||||| ||||| |||||||||||    
T  44855285 gttgtcacaaaatagttatacaaatatcatttctc 44855251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 45528963 - 45529013
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  45528963 agaaatttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 45529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 46344546 - 46344414
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||  |||||||||||||||||| ||||||||        | ||||||||||| |||| |||||| ||| |||| |  ||||||| |||| |||||    
T  46344546 tttttctttcttcttattggtcaaaaataatggagaaagaaaaaggaagagagaggataagaccatcatatgaatatgag--agagaaaattgtacaaaa 46344449  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
     || | ||||| ||||||||||| |||||||||||    
T  46344448 attgtaacaaattagttgtacaaatatcatttctc 46344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 1901866 - 1901997
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||| | ||||||||||||||||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| |||||    
T  1901866 ttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtctaaaag 1901963  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||| | ||||||||| |||||||||||    
T  1901964 ttgtcacaaagtggttgtacaaatatcatttctc 1901997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 1911312 - 1911443
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||| | ||||||||||||||||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| |||||    
T  1911312 ttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtctaaaag 1911409  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctc 179  Q
    || ||||||| | ||||||||| |||||||||||    
T  1911410 ttgtcacaaagtggttgtacaaatatcatttctc 1911443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 2280316 - 2280177
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||       |  |||||||| | || | ||| |||||||  |||| |||||||| |||    
T  2280316 aactttgttgttctctcttctcattggtcaaaaacaatggagagagaaaaaggtagagagagaataaaaacataatgtgag--tgtgagagagaaagttg 2280219  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||||| |   ||||| ||||||||| |||||||||||    
T  2280218 tacaaaagttgtactaaaatggttgtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 7039173 - 7039297
Alignment:
Q  48 ttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagtt 147  Q
    ||||| |||||||||||||||||||||| |||||         ||||||||||| |||| |||||||||||||  || |||| ||| |||| ||||||||    
T  7039173 ttctctcttcttattggtcaaaaacaatagagagaaaaaag--aagagagaggataagaccatcatgtgagta--tgagagataaagttgtacaaaagtt 7039268  T
Q  148 atcacaaaatagttgtacaagtatcattt 176  Q
    | |||||| |  |||||||| ||||||||    
T  7039269 accacaaattgattgtacaaatatcattt 7039297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 9027992 - 9027873
Alignment:
Q  58 ttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaat 157  Q
    ||||||||||||||||||||||||       | ||||| ||| | ||||  || ||||||||||| |  ||||||| || || ||||||||||||||| |    
T  9027992 ttattggtcaaaaacaatggagagagaaaaagaaagagggagaataagagaataatgtgagtatgag--agagaaagttatcaaaaagttatcacaaagt 9027895  T
Q  158 agttgtacaagtatcatttctc 179  Q
     ||||||||| |||||||||||    
T  9027894 ggttgtacaaatatcatttctc 9027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 18169210 - 18169157
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||| ||||||| ||||||| | ||||||||| |||||||||||    
T  18169210 gagagaaatttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 18169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 27162455 - 27162548
Alignment:
Q  92 agagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttattat 188  Q
    |||||||||| || | |||||||||||||  || |||||||| |||| |||||||| | ||||||| ||||||||| ||||| ||||| ||||||||    
T  27162455 agagagaggataacaacatcatgtgagta--tgagagagaaagttgttcaaaagttgttacaaaatggttgtacaaatatcacttctc-tttattat 27162548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 38693585 - 38693642
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||||| |||||||||| |||||||| |||| |||| ||| |||||||||||||||    
T  38693585 gagagaaaattgtccaaaaattatcacataataattgtgcaaatatcatttctcattt 38693642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 38944159 - 38944212
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||| |||||||| ||||||| ||||||||||| |||||||||||    
T  38944159 gagagaaaattgtacaaaagttgtcacaaattagttgtacaaatatcatttctc 38944212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 23906910 - 23906962
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||| ||||||| ||||||||||||||||||||||||||||    
T  23906910 tttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatggagag 23906962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 46574323 - 46574251
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||||||| ||||||| ||| |||||| ||| ||||  ||||||| ||||||||||||| |||||    
T  46574323 gagtagtgatatttgtacaaccatttg-tgacaactttctttctctc--ttcttatcggtcaaaaacaatagagag 46574251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 49031479 - 49031439
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatt 175  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  49031479 ttgtcccaaagttatcacaaaatagttgtacaaatatcatt 49031439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 50657135 - 50657087
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctcatttattat 188  Q
    ||||| |||||| ||||| |||||||||||||||||| |||||||||||    
T  50657135 caaaaattatcataaaattgttgtacaagtatcatttttcatttattat 50657087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 55344315 - 55344367
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||    
T  55344315 agagaaaattgtcaagaagttatcacaaaatggttgtacaaatatcatttctc 55344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 1031354 - 1031401
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggaga 80  Q
    |||| |||||| |||||||  |||||||||||||||||||||||||||    
T  1031354 atgacaactttatttttctttcttcttattggtcaaaaacaatggaga 1031401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 3484927 - 3484853
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| |||||| ||||||| ||| ||||||  ||||||| ||||| ||||||| |||||||| |||||    
T  3484927 gagtagtgatatatgtacaaccatttg-tgacaactttcattttctctcttctcattggtccaaaacaattgagag 3484853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 9027748 - 9027709
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  9027748 ttgttgttctctcttcttattggtcaaaaacaatggagag 9027709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 12044641 - 12044680
Alignment:
Q  5 tgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  12044641 tgagtagtgatatttgtacatccaattgatgacaactttg 12044680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 19418175 - 19418238
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatttattatc 189  Q
    |||||||  ||||| ||||||| ||| ||||| ||||||||| ||||||||||||||| |||||    
T  19418175 gagagaaggttgtcaaaaagttgtcataaaatggttgtacaaatatcatttctcatttcttatc 19418238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 25142776 - 25142684
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtat 121  Q
    |||| |||| |||||||||| ||| ||| | ||||||||||||||||||||||       | ||||||||||| || | ||||||||||||||    
T  25142776 tttggtgattactttgttttcctctcttttaattggtcaaaaacaatggagagagaaaaaggaagagagaggataataacatcatgtgagtat 25142684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 36869791 - 36869908
Alignment:
Q  60 attggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatag 159  Q
    ||||||||||||||||||||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| ||||||| ||| ||||| |    
T  36869791 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtctaaaagttgtcaaaaaatgg 36869888  T
Q  160 ttgtacaagtatcatttctc 179  Q
    |||||||| |||||||||||    
T  36869889 ttgtacaaatatcatttctc 36869908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 43149279 - 43149318
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  43149279 ttgttgttctctcttcttattggtcaaaaacaatggagag 43149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 43900911 - 43900868
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||    
T  43900911 aactttgtttttctctcttcttattggttaaaaataatggagag 43900868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 53932278 - 53932317
Alignment:
Q  5 tgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  53932278 tgagtagtgatatttgtacatccaattgatgacaactttg 53932317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 53932394 - 53932462
Alignment:
Q  109 atcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||| |  || |||| |||||||||| || ||||||||| ||||||||| |||||||||||    
T  53932394 atcatgtgagtatgag--agtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctc 53932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 7867744 - 7867782
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  7867744 aaaagttgtcacaaaatagttgtacaaatatcatttctc 7867782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 23906875 - 23906913
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  23906875 gagtagtgatatttgtacatccaattgatgacaactttg 23906913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 31176458 - 31176512
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| ||||| |||| |||||||||| | ||||||||| ||||||||||||    
T  31176458 gagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctca 31176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 36799436 - 36799398
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  36799436 aaaagttatcaaaaaatagttgtacaaatatcatttctc 36799398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 43441853 - 43441815
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttg 44  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  43441853 gagtagtgatatttgtacatccaattgatgacaactttg 43441815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 43499582 - 43499632
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||||||||||||||| ||| | ||||||||| |||||||||||    
T  43499582 agaaaattgtccaaaagttatcataaagtggttgtacaaatatcatttctc 43499632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 50559229 - 50559283
Alignment:
Q  126 gagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| |||||||| ||| ||||||||||||||| |||||||||||    
T  50559229 gagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttctc 50559283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 51672913 - 51672863
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| |||||||||||    
T  51672913 agaaagttgtcaaaaagttatcacaaagtagatgtacaaatatcatttctc 51672863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1208131 - 1208090
Alignment:
Q  3 tatgagtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  1208131 tatgagtagtgatatttgtacatccaattgatgtcaactttg 1208090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 6178443 - 6178499
Alignment:
Q  126 gagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    |||||||| ||||| |||||||| ||| ||||||||||||||| ||||||||||||||    
T  6178443 gagagaaaattgtcacaaaagttgtca-aaaatagttgtacaaatatcatttctcatt 6178499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 13934677 - 13934636
Alignment:
Q  2 ttatgagtagtgatatttgtacatccatttgatgataacttt 43  Q
    ||||||| | ||||||||| ||||||||||||||||||||||    
T  13934677 ttatgagaaatgatatttgaacatccatttgatgataacttt 13934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 29800567 - 29800620
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||| ||| ||||| |||| |||||||||| ||||||||||| |||||||||||    
T  29800567 gagaaaaagttgtctaaaaattatcacaaagtagttgtacaaatatcatttctc 29800620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 35376569 - 35376622
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| |||| || ||||||||| ||||||||| |||||||||||    
T  35376569 gagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctc 35376622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 37754500 - 37754447
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||||||||| |||| | ||||||| ||||||| |||||||||||    
T  37754500 gagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctc 37754447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 40159856 - 40159909
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| | | ||||||||||||||| |||||||||||    
T  40159856 gagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 40159909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 41637294 - 41637351
Alignment:
Q  123 tgtgagagaaatttgtc-caaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| ||||| |||||    
T  41637294 tgtgagagaaagttgtcacaaaagttgtcaaaaaatagttgtacaaatatcacttctc 41637351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 43409380 - 43409433
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| || ||||||| |||||||||| | ||||||||| |||||||||||    
T  43409380 gagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttctc 43409433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 49196749 - 49196696
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| |||||  |||||| ||||||||| ||||||||| |||||||||||    
T  49196749 gagagaaaattgtcacaaagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 51717623 - 51717586
Alignment:
Q  7 agtagtgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  51717623 agtagtgatatttgtacatccaattgatgacaactttg 51717586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 1208013 - 1207944
Alignment:
Q  110 tcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||||||||||| |  ||| ||| |||| ||| |||| ||||| ||||||||||||| |||||||||||||    
T  1208013 tcatgtgagtatgag--agataaaattgttcaacagttgtcacataatagttgtacaaatatcatttctcat 1207944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 2009802 - 2009750
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||| ||||||| |||||||||||||||||| |||||||||    
T  2009802 tttggtgacaaccttgcttttctctcttcttattggtcaaaaataatggagag 2009750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 23183613 - 23183645
Alignment:
Q  12 tgatatttgtacatccatttgatgataactttg 44  Q
    |||||||||||||||||||| ||||||||||||    
T  23183613 tgatatttgtacatccatttaatgataactttg 23183645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 35272159 - 35272123
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  35272159 tttttctctctttttattggtcaaaaacaatggagag 35272123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 35987286 - 35987254
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatca 173  Q
    ||||||||||||||||||||||||||| |||||    
T  35987286 aaaagttatcacaaaatagttgtacaaatatca 35987254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 41957645 - 41957609
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||||||| | ||||||||||||||||||||||    
T  41957645 tttttctcacttttcattggtcaaaaacaatggagag 41957609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 48945991 - 48945943
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||||  ||||||||| || | ||||||||||||||||||||||    
T  48945991 atgataacttcttttttctcaattttcattggtcaaaaacaatggagag 48945943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 51137068 - 51137108
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||||| | ||||||||||||||| ||||||||||||    
T  51137068 caaaagttattaaaaaatagttgtacaaatatcatttctca 51137108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 52100313 - 52100257
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||||| |||| ||||| |||| | ||||| ||||||||| |||||||||||||||    
T  52100313 agagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttctcattt 52100257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 698 - 527
Alignment:
Q  6 gagtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaag 105  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||| ||         ||||||||| | |||    
T  698 gagtagtgatatttgtacatccaattgatgacaactttgtttctctctcttcttattggtcaaaaacaatggatagagaaaaatgaagagagagaataag 599  T
Q  106 atcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |   || ||||||||  || |||||||| |||||| |||||| ||||| ||| ||||||||| ||| |||||||    
T  598 aatctcgtgtgagta--tgagagagaaagttgtcccaaagttgtcacataatggttgtacaaatataatttctc 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 12501612 - 12501475
Alignment:
Q  39 actttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgt 138  Q
    |||||||||||||| ||||||||| ||||||||||||||||||       |||||||||| ||||||| |||||| | ||||  ||||||||||| ||||    
T  12501612 actttgtttttctctcttcttattcgtcaaaaacaatggagagagaaaaagtaagagagatgaaaagaacatcatataagta--tgtgagagaaagttgt 12501515  T
Q  139 ccaaaagttatcacaaaatagttgtacaagtatcatttct 178  Q
      |||| || |||||||||| |||||||| ||||||||||    
T  12501514 ttaaaaattgtcacaaaataattgtacaaatatcatttct 12501475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 12499950 - 12500100
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||       |||||||||||||||||| |||||| | ||||  ||||||    
T  12499950 tttgatgataattttgtttttctctcttcttattcgtcaaaaacaatggagagagaaaaagtaagagagaggaaaagaacatcatataagta--tgtgag 12500047  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    | ||| || |  |||| || |||||||||  |||| ||| |||||||||||||    
T  12500048 aaaaagttatttaaaaattgtcacaaaatgattgtgcaaatatcatttctcat 12500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 12507279 - 12507429
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||       |||||||||||||||||| |||||| | ||||  ||||||    
T  12507279 tttgatgataattttgtttttctctcttcttattcgtcaaaaacaatggagagagaaaaagtaagagagaggaaaagaacatcatataagta--tgtgag 12507376  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    | ||| || |  |||| || |||||||||  |||| ||| |||||||||||||    
T  12507377 aaaaagttatttaaaaattgtcacaaaatgattgtgcaaatatcatttctcat 12507429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 12508951 - 12508801
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||       |||||||||||||||||| |||||| | ||||  ||||||    
T  12508951 tttgatgataattttgtttttctctcttcttattcgtcaaaaacaatggagagagaaaaagtaagagagaggaaaagaacatcatataagta--tgtgag 12508854  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    | ||| || |  |||| || |||||||||  |||| ||| |||||||||||||    
T  12508853 aaaaagttatttaaaaattgtcacaaaatgattgtgcaaatatcatttctcat 12508801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 237332 - 237469
Alignment:
Q  40 ctttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtc 139  Q
    ||||||||||||| |||||||||||||||||| |||||||||       | | |||||| || |||| ||||||||||||||| |  ||||||| |||||    
T  237332 ctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggatgagagacgataagaacatcatgtgagtatgag--agagaaagttgtc 237429  T
Q  140 caaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
     |||||| ||||||| || ||||||||| |||||||||||    
T  237430 aaaaagtaatcacaagatggttgtacaaatatcatttctc 237469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3339435 - 3339570
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| |||||||||||||||||| |||||       | |||||| |||| |||| | ||||||||||||| |  ||||||| |||| ||    
T  3339435 ttgtttttctctctttttattggtcaaaaacaatagagagagaaaaaggaagagataggataagaccgtcatgtgagtatgag--agagaaagttgtaca 3339532  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||||| ||||||||| |||||||||||    
T  3339533 aaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 2056918 - 2056783
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| ||||||||||||||||||||||||| ||         ||||||||||| |||| ||||||||||||||| |  ||||||| | || ||    
T  2056918 ttgtttctctctcttcttattggtcaaaaacaatggatagagaaaaaagaagagagaggataagaccatcatgtgagtatgag--agagaaagtagtaca 2056821  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||||||| | ||||||||| |||||||||||    
T  2056820 aaagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 17902628 - 17902763
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||         ||||||||||| |||| |||||||||||||  |  |||||||| ||||  |    
T  17902628 ttgtttttctctcttcttattggtcaaaaacaatggagagataaaaaagaagagagaggataagaccatcatgtgagta--tcagagagaaagttgtata 17902725  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| ||| ||| ||||| ||||| |||||||||||    
T  17902726 aaagttgtcataaattagttatacaaatatcatttctc 17902763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 3660289 - 3660429
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||| ||||||||||||||||||| ||||         |||||||| || |||| ||||||||||||||| |  ||| ||| |||| ||    
T  3660289 ttgtttttctctctttttattggtcaaaaacaatgcagagagaaaaaagaagagagaagataagaccatcatgtgagtatgag--agaaaaaattgtaca 3660386  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    |||||| ||||||| | ||||||||| ||| ||||||||||||    
T  3660387 aaagttgtcacaaattggttgtacaaatataatttctcattta 3660429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 6435184 - 6435032
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||| ||||||||||| |||||||||||| |||||||||||| ||       |||||||||| || ||||   |||||||||||  || |||    
T  6435184 tttggtgacaaccttgtttttctctcttcttattggttaaaaacaatggatagagaaaaagtaagagagaagataagaatgtcatgtgagta--tgagag 6435087  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    | ||| ||||| ||||||| ||||||| | ||||||||| |||||||||| ||||    
T  6435086 ataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctaattt 6435032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 32457206 - 32457325
Alignment:
Q  60 attggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatag 159  Q
    ||||||||||||||||||||||       | ||||||||| | ||||  || |||||||||||||  ||||||| ||||| ||||||| ||||||| | |    
T  32457206 attggtcaaaaacaatggagagagaaaaaggaagagagagaataagagtataatgtgagtatgtg--agagaaaattgtcaaaaagttgtcacaaagtgg 32457303  T
Q  160 ttgtacaagtatcatttctcat 181  Q
    |||||||| |||||||||||||    
T  32457304 ttgtacaaatatcatttctcat 32457325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 25924787 - 25924937
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| ||||||||||| ||| ||| | ||||||||||||||||||||||       | ||||||| | | || | ||||||||||||||| |  ||    
T  25924787 tttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaagagagcgaataataacatcatgtgagtatgag--ag 25924884  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    ||||| ||||| ||||||| |  |||||| ||||||||| |||||||||||||    
T  25924885 agaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcat 25924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 24007436 - 24007510
Alignment:
Q  7 agtagtgatatttgtacatccatttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||||| ||||| | ||| ||| ||||||| |||  |||||||||||||||||||||||    
T  24007436 agtaatgatatttgtacatccaattgataacaaccttgcttttctctctttctattggtcaaaaacaatggagag 24007510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 11017517 - 11017383
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    |||||| |||| ||||||||||||||||||||||||||||       | || ||||| || ||||||||||||||||||  || |||||||| |||| ||    
T  11017517 ttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaaaagaga-gataagatcatcatgtgagta--tgagagagaaagttgtaca 11017421  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||| |||| || |  |||||||| ||| |||||||    
T  11017420 aaagttgtcacgaattgattgtacaaatattatttctc 11017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27334944 - 27334858
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| |||| ||||||||||||||| |  |  |||| || | |||||||| ||||||||||||||||||| |||||||||||    
T  27334944 aagagagaggataagaccatcatgtgagtatgag--aaggaaagttatacaaaagttgtcacaaaatagttgtacaaatatcatttctc 27334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27395684 - 27395598
Alignment:
Q  91 aagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| |||| ||||||||||||||| |  |  |||| || | |||||||| ||||||||||||||||||| |||||||||||    
T  27395684 aagagagaggataagaccatcatgtgagtatgag--aaggaaagttatacaaaagttgtcacaaaatagttgtacaaatatcatttctc 27395598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 1804017 - 1803965
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  1804017 tttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagag 1803965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 17835756 - 17835708
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  17835756 atgacaactttgtttttctctcttcttattggttaaaaacaatggagag 17835708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 12151789 - 12151832
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  12151789 aactttgttgttctctcttcttattggtcaaaaacaatggagag 12151832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 12044462 - 12044332
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    ||||||||  |||| ||||||||||||||||||||||       | ||||||||| |||| || || ||||||||||| |  ||||||| ||||| ||||    
T  12044462 tttttctcttttctcattggtcaaaaacaatggagagagaaaaaggaagagagagtaaaa-at-ataatgtgagtatgag--agagaaagttgtctaaaa 12044367  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||| ||| |||||||||||| || |||||||||||    
T  12044366 gttgtcaaaaaatagttgtataaatatcatttctc 12044332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 28965763 - 28965911
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| |||||||||||||| |||| ||| | ||||||||||||||||| ||||         ||||||||  | || |  |||||||||||||| |  ||    
T  28965763 tttggtgataactttgtttctctctcttttgattggtcaaaaacaatgaagagagaaaaaagaagagagaatataataatatcatgtgagtatgag--ag 28965860  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||| | ||||||| ||||||||| |||||||||||    
T  28965861 agaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 16743205 - 16743340
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||| ||||| |||||||||||||||| |||||       | |||||||||   ||||  || ||||||||||| |  ||||||| ||||| ||||    
T  16743205 tttttctctcttctcattggtcaaaaacaattgagagagaaaaaggaagagagagagtaagaatataatgtgagtatgag--agagaaagttgtctaaaa 16743302  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
     |||| | ||||| ||||||||| ||||||||||||||    
T  16743303 attattaaaaaatggttgtacaaatatcatttctcatt 16743340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 28883752 - 28883820
Alignment:
Q  112 atgtgagtatgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||||||||||| | |||||||| ||||| ||| ||||| | ||||| ||||||||| ||||||||||||    
T  28883752 atgtgagtatgagagagagaaagttgtcaaaaggttattaaaaaatggttgtacaaatatcatttctca 28883820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 12280494 - 12280435
Alignment:
Q  125 tgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    ||||| ||||||||  ||||||| ||| ||||||||| ||||| ||||||||||||||||    
T  12280494 tgagaaaaatttgttgaaaagttgtcagaaaatagttatacaaatatcatttctcattta 12280435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 3089031 - 3088973
Alignment:
Q  121 tgtgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||| |||||||| ||||| ||||||| |||| |||| ||||||||| |||||||||||    
T  3089031 tgtgagagagaaaattgtctaaaagttgtcactaaatggttgtacaaatatcatttctc 3088973  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 9954601 - 9954548
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||    
T  9954601 gagagaaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctc 9954548  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 22492045 - 22492098
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| | ||||||||||||||| ||||||||  |||||||||||    
T  22492045 gagagaaagttgtcaagaagttatcacaaaatggttgtacatatatcatttctc 22492098  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 29376734 - 29376791
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattta 184  Q
    ||||||| ||||  ||||||| ||||||||| |||||| || ||||||||||||||||    
T  29376734 agagaaagttgttaaaaagttgtcacaaaatggttgtaaaaatatcatttctcattta 29376791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 32644660 - 32644619
Alignment:
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    |||||| ||| ||||||||||||||| |||||||||||||||    
T  32644660 aaagttgtcaaaaaatagttgtacaaatatcatttctcattt 32644619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 2881481 - 2881429
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| |||||||||| |||| |||||||||||||||||| ||| |||||    
T  2881481 tttggtgacaactttgtttctctctcttcttattggtcaaaaataatagagag 2881429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 3401123 - 3401087
Alignment:
Q  140 caaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  3401123 caaaaattatcacaaaatagttgtacaaatatcattt 3401087  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 4923090 - 4923042
Alignment:
Q  33 atgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||| |||||    
T  4923090 atgataattttgtttttctctcttcttattggttaaaaataattgagag 4923042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 7693463 - 7693411
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| || |||  ||||||| ||||||||||||| ||||||||||||||    
T  7693463 tttgatgacaatttttattttctctcttcttattggtccaaaacaatggagag 7693411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 8173331 - 8173383
Alignment:
Q  127 agagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||| ||||||||||||||| | |||| |||| |||||||||||    
T  8173331 agagaaaattgtctaaaagttatcacaaagtggttgcacaaatatcatttctc 8173383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 8778887 - 8778943
Alignment:
Q  123 tgtgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||||| ||||| ||||||| | | ||||| ||||||||| |||||||||||    
T  8778887 tgtgagagaaagttgtcaaaaagttgttaaaaaatggttgtacaaatatcatttctc 8778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 9188885 - 9188921
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| |||||||||||||||||| |||||||||    
T  9188885 tttttctctcttcttattggtcaaaaataatggagag 9188921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15328637 - 15328585
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||| ||| ||||||||||| ||| ||| | ||||||||||||||||||||||    
T  15328637 tttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagag 15328585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 30622172 - 30622120
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| ||||||  |||| || ||||||||||||| ||||||||||||||    
T  30622172 tttgatgacaactttcattttttctcttcttattggtccaaaacaatggagag 30622120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 32784782 - 32784734
Alignment:
Q  135 ttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcattt 183  Q
    ||||| ||||||| | |||||||| |||||||| |||||||||||||||    
T  32784782 ttgtcaaaaagttgtaacaaaataattgtacaaatatcatttctcattt 32784734  T

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Target: scaffold0011 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 18738 - 18594
Alignment:
Q  34 tgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaa 133  Q
    ||||||| || ||||||||  |||||||| ||||||||||||||||||       | ||||||||| | |||| ||||||||||||||| |  |||||||    
T  18738 tgataaccttatttttctctattcttattagtcaaaaacaatggagagagaaaaaggaagagagagaataagaccatcatgtgagtatgag--agagaaa 18641  T
Q  134 tttgtccaaaagttatcacaaaatagttgtacaagtatcatttctca 180  Q
     |||| |||||||||||||||| | ||||||||| ||||||||||||    
T  18640 gttgtacaaaagttatcacaaattggttgtacaaatatcatttctca 18594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 1428 - 1567
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       | ||||||||| | |||| ||||||||||| |  || |||||||| |||    
T  1428 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagagaataagaccatcatgtgagaa--tgagagagaaaattg 1525  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    | |||||||| ||||||| | ||| ||||| |||||||||||    
T  1526 tacaaaagttgtcacaaattggttatacaaatatcatttctc 1567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 176
Target Start/End: Original strand, 31232 - 31366
Alignment:
Q  38 aactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttg 137  Q
    |||||||||||||||  ||||||||||||||||| |||||||||       | ||||||||||| |||| |||||||||||||||    ||||||| |||    
T  31232 aactttgtttttctctgttcttattggtcaaaaataatggagagataaaaaggaagagagaggataagaacatcatgtgagtatg----agagaaagttg 31327  T
Q  138 tccaaaagttatcacaaaatagttgtacaagtatcattt 176  Q
    |||||||||| | ||||||| ||||| ||| ||||||||    
T  31328 tccaaaagttgttacaaaatggttgtccaaatatcattt 31366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 147192 - 147329
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| ||||||||||||||||||||||||||||       | |||||||| || |||| |||||| ||||||  || |||||||| |||| ||    
T  147192 ttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagacgataagaccatcatatgagta--tgagagagaaagttgtaca 147289  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||| ||||||| || |||||||  |||||||||||||    
T  147290 aaagttgtcacaaattaattgtacagatatcatttctcat 147329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 440771 - 440716
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    |||||||| ||||| ||||||| ||| ||| ||||||||||| |||||||||||||    
T  440771 gagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcatttctcat 440716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 2444 - 2576
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||| |||||||||||||| |||||||||       | ||||||||| | ||||   ||||||||||||| |  ||||||| ||||||||||     
T  2444 ttttctctctttttattggtcaaaaataatggagagagaagaaggaagagagagaataagaatctcatgtgagtatgag--agagaaagttgtccaaaaa 2541  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctca 180  Q
    |||||||| ||||| ||||||| ||||||||||||    
T  2542 ttatcacataatagatgtacaaatatcatttctca 2576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 17123 - 16972
Alignment:
Q  29 tttgatgataactttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgag 128  Q
    |||| ||| |||||||||| |||| ||||| ||||||||||||||||||||||         ||||||||| | || | |||||||||||||  || |||    
T  17123 tttggtgacaactttgtttctctctcttctgattggtcaaaaacaatggagagagaaaaaagaagagagagaataataacatcatgtgagta--tgagag 17026  T
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctcatt 182  Q
    ||||| ||||| ||||||| |   ||||| ||||||||| ||||||||||||||    
T  17025 agaaagttgtcaaaaagttgtagtaaaatggttgtacaaatatcatttctcatt 16972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 249078 - 249213
Alignment:
Q  42 ttgtttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtcca 141  Q
    ||||||||||| |||||||||| |||||||||||||||||         |||||| | || |||| |||||||||||||  || |||||||| |||| ||    
T  249078 ttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaatgaagagaaatgataagaccatcatgtgagta--tgagagagaaagttgtaca 249175  T
Q  142 aaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||||||||| |  |||| ||| |||||||||||    
T  249176 aaagttatcacaaattgattgtgcaaatatcatttctc 249213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 180
Target Start/End: Original strand, 11475 - 11608
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaa 144  Q
    |||||||||||| | ||||||||||||||||||||||       | ||||||||| | || | ||| |||||||||  || |||||||| ||||| | ||    
T  11475 tttttctcacttttcattggtcaaaaacaatggagagagaaaaaggaagagagagaataaaaacataatgtgagta--tgagagagaaaattgtcaagaa 11572  T
Q  145 gttatcacaaaatagttgtacaagtatcatttctca 180  Q
    ||| ||||||| ||| ||||||| ||||||||||||    
T  11573 gttgtcacaaagtagatgtacaaatatcatttctca 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 113756 - 113623
Alignment:
Q  46 ttttctcacttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaag 145  Q
    ||||||| ||| | ||||||||||||||| ||||||       | ||||||||| | ||||  || |||||||||||||  ||||||| ||||  |||||    
T  113756 ttttctctcttttcattggtcaaaaacaacggagagagtaaaaggaagagagagaataagagtataatgtgagtatgtg--agagaaagttgttaaaaag 113659  T
Q  146 ttatcacaaaatagttgtacaagtatcatttctcat 181  Q
    || ||||||| | ||||||||| |||||||||||||    
T  113658 ttgtcacaaagtggttgtacaaatatcatttctcat 113623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 1131 - 1078
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||    
T  1131 gagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttctc 1078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 36055 - 36002
Alignment:
Q  126 gagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    |||||||| ||||| |||| |||||||||| ||||||||||| |||||||||||    
T  36055 gagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctc 36002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 88930 - 88808
Alignment:
Q  55 ttcttattggtcaaaaacaatggagagnnnnnnngtaagagagaggaaaagatcatcatgtgagtatgtgtgagagaaatttgtccaaaagttatcacaa 154  Q
    |||||||||||||||||||||||||||       | |||||| |||| ||||  ||||||| || ||  |  ||||||| ||||  ||||||||||||||    
T  88930 ttcttattggtcaaaaacaatggagagagaaaaaggaagagaaaggataagacaatcatgtaagaataag--agagaaaattgtataaaagttatcacaa 88833  T
Q  155 aatagttgtacaagtatcatttctc 179  Q
    | | ||||||||| |||||||||||    
T  88832 attggttgtacaaatatcatttctc 88808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 4365 - 4315
Alignment:
Q  129 agaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||| ||||| ||||||||||| ||||| ||||||||| |||||||||||    
T  4365 agaaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttctc 4315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 19724 - 19762
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  19724 aaaagttgtcacaaaatagttgtacaaatatcatttctc 19762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 72186 - 72240
Alignment:
Q  125 tgagagaaatttgtccaaaagttatcacaaaatagttgtacaagtatcatttctc 179  Q
    ||||||||| ||||| ||||||| | ||||||| ||||||||| |||||||||||    
T  72186 tgagagaaagttgtctaaaagttgttacaaaatggttgtacaaatatcatttctc 72240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 89469 - 89503
Alignment:
Q  141 aaaagttatcacaaaatagttgtacaagtatcatt 175  Q
    |||| ||||||||||||||||||||||||||||||    
T  89469 aaaaattatcacaaaatagttgtacaagtatcatt 89503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 4092 - 4035
Alignment:
Q  129 agaaatttgtccaaaagtt-atcacaaaatagttgtacaagtatcatttctcatttat 185  Q
    ||||| ||||| ||||||| |||||||||| ||||||||| ||||||||||| |||||    
T  4092 agaaaattgtcaaaaagtttatcacaaaatggttgtacaaatatcatttctcttttat 4035  T

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Target: scaffold0193 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 24805 - 24769
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    |||||||| |||||||||||| |||||||||||||||    
T  24805 tttttctctcttcttattggttaaaaacaatggagag 24769  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 190824 - 190860
Alignment:
Q  45 tttttctcacttcttattggtcaaaaacaatggagag 81  Q
    ||||||||| || ||||||||||||||||||||||||    
T  190824 tttttctcattttttattggtcaaaaacaatggagag 190860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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