View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8649_low_7 (Length: 265)
Name: NF8649_low_7
Description: NF8649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8649_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 7499929 - 7500160
Alignment:
| Q |
14 |
gaagaaggaaaacacatccaatccaattaccacaattgttctaaccatgaaaacctagtagatttaaatgaaatatttaagaattggtataaaccttttc |
113 |
Q |
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| T |
7499929 |
gaagaagtaaaacacatccaatccaattaccacaattgttctaaccatgaaaacctagtagatttaaatgaaatatttaaaaattggtataaaccttttc |
7500028 |
T |
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| Q |
114 |
aatcaaatataatcctctctccattttgaattgcattcacgagattaatgccagcttgcctccccagttctccggtcatacgctctattccaaactcaac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
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| T |
7500029 |
aatcaaatataatcctctctccattttgaattgcattcacgagattaatgccagcttgcctccccagttctccggtcatatgctctattccaaacacaac |
7500128 |
T |
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| Q |
214 |
aatcctcacgtacaaccgatctcctccacctt |
245 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
7500129 |
aatcctcacgtacaaccgatctcctccacctt |
7500160 |
T |
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