View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8650_high_29 (Length: 201)
Name: NF8650_high_29
Description: NF8650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8650_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 8e-63; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 40646235 - 40646356
Alignment:
| Q |
62 |
agttgaagtaatccaatcaatcctcaactgtctaaaatctggccacatccaaaaagccgcatccattctctttgacttcccactacccttccctcactct |
161 |
Q |
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| T |
40646235 |
agttgaagtaatccaatcaatcctcaactgtctaaaatctggccacatccaaaaagccgcatccattctctttgacttcccactacccttccctcactct |
40646334 |
T |
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| Q |
162 |
ctctacgcccatttcttccgtc |
183 |
Q |
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|||||||||||||||||||||| |
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| T |
40646335 |
ctctacgcccatttcttccgtc |
40646356 |
T |
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