View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8650_high_7 (Length: 373)

Name: NF8650_high_7
Description: NF8650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8650_high_7
NF8650_high_7
[»] chr8 (44 HSPs)
chr8 (1-340)||(1522483-1522822)
chr8 (16-168)||(1518135-1518301)
chr8 (1-98)||(1512917-1513014)
chr8 (208-279)||(31291216-31291287)
chr8 (206-310)||(40418123-40418227)
chr8 (211-310)||(28183740-28183839)
chr8 (212-310)||(33128194-33128292)
chr8 (208-335)||(24197831-24197959)
chr8 (207-310)||(12320983-12321086)
chr8 (215-294)||(31665157-31665235)
chr8 (208-340)||(40216776-40216910)
chr8 (215-296)||(3728369-3728449)
chr8 (207-279)||(37371701-37371773)
chr8 (209-272)||(34906502-34906565)
chr8 (218-296)||(25899225-25899303)
chr8 (215-340)||(27849742-27849866)
chr8 (215-296)||(6229223-6229304)
chr8 (215-279)||(18752347-18752409)
chr8 (215-279)||(11098134-11098197)
chr8 (215-326)||(31941047-31941158)
chr8 (213-335)||(32778500-32778623)
chr8 (212-279)||(34839096-34839161)
chr8 (212-296)||(37817378-37817461)
chr8 (215-250)||(33024196-33024231)
chr8 (215-310)||(44604851-44604944)
chr8 (215-340)||(4430734-4430858)
chr8 (215-340)||(4977033-4977157)
chr8 (215-340)||(6317305-6317429)
chr8 (215-340)||(10096617-10096741)
chr8 (215-340)||(25063344-25063469)
chr8 (215-340)||(34711554-34711678)
chr8 (213-267)||(36442759-36442813)
chr8 (215-340)||(44814868-44814992)
chr8 (215-296)||(7772093-7772173)
chr8 (233-340)||(13403418-13403524)
chr8 (215-296)||(36586487-36586567)
chr8 (215-279)||(403671-403734)
chr8 (215-310)||(8547160-8547253)
chr8 (214-310)||(11021340-11021436)
chr8 (213-297)||(11637594-11637678)
chr8 (215-279)||(30089963-30090027)
chr8 (215-279)||(33067448-33067511)
chr8 (244-296)||(39068446-39068498)
chr8 (215-279)||(43129101-43129164)
[»] chr2 (36 HSPs)
chr2 (208-340)||(13491023-13491156)
chr2 (208-329)||(4793744-4793867)
chr2 (208-310)||(39417440-39417541)
chr2 (208-307)||(25219875-25219974)
chr2 (215-340)||(11543798-11543923)
chr2 (215-293)||(16178264-16178341)
chr2 (212-329)||(37103323-37103441)
chr2 (215-296)||(18368799-18368879)
chr2 (212-340)||(22999076-22999205)
chr2 (215-279)||(727349-727412)
chr2 (234-335)||(18741401-18741503)
chr2 (214-328)||(32517828-32517943)
chr2 (215-340)||(4014812-4014936)
chr2 (215-340)||(40812022-40812146)
chr2 (235-296)||(12541379-12541440)
chr2 (215-296)||(13268018-13268098)
chr2 (215-296)||(34242494-34242574)
chr2 (215-296)||(38463144-38463224)
chr2 (215-296)||(42160300-42160380)
chr2 (215-296)||(42200905-42200985)
chr2 (208-279)||(3680855-3680927)
chr2 (215-279)||(43035445-43035508)
chr2 (212-335)||(816351-816471)
chr2 (212-279)||(9993171-9993238)
chr2 (215-340)||(21840448-21840571)
chr2 (215-340)||(20251484-20251608)
chr2 (211-337)||(31223776-31223905)
chr2 (207-297)||(40710877-40710967)
chr2 (215-296)||(2287352-2287432)
chr2 (215-296)||(15897219-15897299)
chr2 (215-296)||(23080141-23080221)
chr2 (212-272)||(25994718-25994779)
chr2 (215-275)||(16368752-16368811)
chr2 (214-310)||(19967738-19967832)
chr2 (215-279)||(30854795-30854859)
chr2 (215-279)||(40592318-40592381)
[»] chr4 (40 HSPs)
chr4 (207-329)||(24870593-24870716)
chr4 (208-335)||(46343326-46343454)
chr4 (207-335)||(37759424-37759554)
chr4 (208-310)||(13849353-13849455)
chr4 (221-310)||(9696321-9696410)
chr4 (209-340)||(28758375-28758507)
chr4 (215-296)||(54086016-54086096)
chr4 (208-307)||(22717095-22717194)
chr4 (208-310)||(37340137-37340238)
chr4 (208-254)||(50981783-50981829)
chr4 (215-296)||(3084285-3084365)
chr4 (215-296)||(29428060-29428140)
chr4 (212-263)||(3802987-3803038)
chr4 (208-307)||(22988023-22988122)
chr4 (212-338)||(38944381-38944508)
chr4 (217-279)||(8810829-8810891)
chr4 (215-340)||(13389025-13389149)
chr4 (215-340)||(37166143-37166267)
chr4 (215-296)||(1083513-1083593)
chr4 (208-257)||(1100823-1100872)
chr4 (215-296)||(24712093-24712173)
chr4 (215-296)||(36752364-36752444)
chr4 (215-279)||(17480936-17481000)
chr4 (218-335)||(579246-579362)
chr4 (215-340)||(30044583-30044707)
chr4 (215-296)||(5396983-5397063)
chr4 (215-296)||(24550818-24550898)
chr4 (211-252)||(41293148-41293189)
chr4 (215-296)||(42154181-42154261)
chr4 (216-340)||(46107398-46107523)
chr4 (212-297)||(47585358-47585443)
chr4 (215-279)||(9569480-9569543)
chr4 (215-340)||(12821170-12821292)
chr4 (215-267)||(17815214-17815265)
chr4 (215-279)||(33416640-33416703)
chr4 (215-279)||(33840624-33840688)
chr4 (262-310)||(40379709-40379757)
chr4 (215-279)||(42856568-42856631)
chr4 (215-279)||(49535890-49535953)
chr4 (215-255)||(55853398-55853438)
[»] chr7 (37 HSPs)
chr7 (208-340)||(46021429-46021562)
chr7 (212-339)||(24333342-24333470)
chr7 (207-340)||(41708542-41708674)
chr7 (208-340)||(9506840-9506973)
chr7 (206-331)||(6328181-6328307)
chr7 (209-310)||(44136156-44136258)
chr7 (209-310)||(46910937-46911038)
chr7 (206-340)||(12645296-12645431)
chr7 (212-279)||(47086360-47086427)
chr7 (207-340)||(12961822-12961956)
chr7 (215-296)||(43133146-43133227)
chr7 (212-329)||(35289847-35289963)
chr7 (208-279)||(8059842-8059913)
chr7 (233-336)||(30102678-30102781)
chr7 (217-296)||(30627630-30627709)
chr7 (215-254)||(40013268-40013307)
chr7 (212-340)||(8037545-8037674)
chr7 (215-340)||(35157083-35157207)
chr7 (211-340)||(45957332-45957462)
chr7 (208-340)||(22702392-22702524)
chr7 (224-340)||(36251663-36251780)
chr7 (215-296)||(45236935-45237015)
chr7 (207-251)||(12964581-12964625)
chr7 (215-340)||(2354794-2354920)
chr7 (215-310)||(32251365-32251458)
chr7 (235-296)||(4227358-4227419)
chr7 (215-296)||(10422483-10422563)
chr7 (208-265)||(30215838-30215895)
chr7 (243-308)||(37938097-37938162)
chr7 (267-335)||(39580552-39580621)
chr7 (215-279)||(1869820-1869884)
chr7 (213-253)||(6030724-6030764)
chr7 (214-254)||(32134262-32134302)
chr7 (215-279)||(37117905-37117968)
chr7 (215-279)||(40677022-40677086)
chr7 (212-296)||(46274949-46275033)
chr7 (215-279)||(48729744-48729807)
[»] chr1 (46 HSPs)
chr1 (17-110)||(16643807-16643899)
chr1 (212-335)||(7204511-7204635)
chr1 (206-340)||(44836116-44836251)
chr1 (207-331)||(27868274-27868399)
chr1 (208-340)||(8312526-8312659)
chr1 (211-333)||(8793180-8793303)
chr1 (208-310)||(32947617-32947719)
chr1 (208-304)||(236567-236663)
chr1 (206-254)||(4628049-4628097)
chr1 (208-340)||(17540075-17540207)
chr1 (211-310)||(41651074-41651172)
chr1 (215-340)||(270322-270445)
chr1 (215-326)||(15104049-15104159)
chr1 (209-335)||(37186820-37186947)
chr1 (215-254)||(10430424-10430463)
chr1 (208-254)||(3628652-3628698)
chr1 (247-340)||(27227119-27227213)
chr1 (216-310)||(37315083-37315177)
chr1 (215-340)||(39606409-39606534)
chr1 (212-254)||(45611546-45611588)
chr1 (215-296)||(42631028-42631108)
chr1 (208-335)||(11080964-11081092)
chr1 (215-279)||(16689091-16689154)
chr1 (244-335)||(35068907-35068999)
chr1 (212-296)||(43086514-43086597)
chr1 (208-255)||(45751111-45751157)
chr1 (242-335)||(12176527-12176621)
chr1 (211-257)||(15331144-15331189)
chr1 (215-296)||(5598306-5598386)
chr1 (215-296)||(5790063-5790143)
chr1 (215-296)||(26261336-26261416)
chr1 (212-277)||(34271082-34271147)
chr1 (235-296)||(45788647-45788708)
chr1 (215-296)||(48314172-48314252)
chr1 (215-296)||(49500866-49500946)
chr1 (212-276)||(8050483-8050547)
chr1 (215-279)||(11403174-11403237)
chr1 (242-310)||(13980336-13980403)
chr1 (215-279)||(15952892-15952955)
chr1 (215-279)||(18475114-18475177)
chr1 (212-335)||(19596659-19596783)
chr1 (215-279)||(24119661-24119724)
chr1 (227-279)||(26763404-26763456)
chr1 (215-279)||(40685534-40685597)
chr1 (213-257)||(43841860-43841904)
chr1 (212-296)||(49632556-49632640)
[»] chr5 (34 HSPs)
chr5 (208-333)||(26526510-26526636)
chr5 (215-340)||(22792108-22792234)
chr5 (212-340)||(30527983-30528112)
chr5 (212-340)||(30568323-30568452)
chr5 (215-296)||(6053094-6053174)
chr5 (207-267)||(8595559-8595619)
chr5 (212-335)||(11408374-11408498)
chr5 (215-294)||(671104-671182)
chr5 (213-304)||(11462739-11462830)
chr5 (208-279)||(29401764-29401835)
chr5 (215-340)||(23074643-23074768)
chr5 (212-298)||(41215276-41215362)
chr5 (215-296)||(1833362-1833443)
chr5 (215-296)||(9054014-9054094)
chr5 (208-277)||(34543160-34543229)
chr5 (215-296)||(40318828-40318909)
chr5 (210-340)||(9599311-9599442)
chr5 (212-304)||(12168253-12168344)
chr5 (215-279)||(12262875-12262939)
chr5 (215-340)||(12878119-12878241)
chr5 (215-279)||(21728665-21728729)
chr5 (264-334)||(6525892-6525963)
chr5 (222-340)||(34856592-34856710)
chr5 (215-257)||(972676-972718)
chr5 (215-340)||(4164964-4165088)
chr5 (212-254)||(13538271-13538313)
chr5 (215-340)||(23311172-23311296)
chr5 (215-257)||(24443949-24443990)
chr5 (215-296)||(1612377-1612458)
chr5 (215-296)||(37940923-37941003)
chr5 (215-296)||(41408631-41408712)
chr5 (215-279)||(2025741-2025804)
chr5 (212-296)||(25567725-25567809)
chr5 (215-255)||(29069633-29069672)
[»] chr3 (42 HSPs)
chr3 (212-310)||(10661985-10662082)
chr3 (208-310)||(47665239-47665341)
chr3 (212-310)||(33095979-33096077)
chr3 (208-279)||(54923483-54923554)
chr3 (208-310)||(4659535-4659637)
chr3 (209-307)||(10511222-10511319)
chr3 (212-310)||(10514549-10514646)
chr3 (212-335)||(7131506-7131620)
chr3 (225-338)||(1562809-1562920)
chr3 (210-254)||(7251624-7251668)
chr3 (212-335)||(27157926-27158050)
chr3 (240-304)||(40878218-40878282)
chr3 (235-279)||(51053642-51053686)
chr3 (208-279)||(8526152-8526223)
chr3 (217-326)||(2558754-2558862)
chr3 (212-254)||(11751213-11751255)
chr3 (215-296)||(40840173-40840254)
chr3 (207-260)||(42156980-42157033)
chr3 (212-328)||(21129055-21129164)
chr3 (215-279)||(24751758-24751821)
chr3 (215-279)||(28171039-28171103)
chr3 (213-269)||(39948528-39948584)
chr3 (217-276)||(37278599-37278658)
chr3 (215-340)||(41464669-41464795)
chr3 (215-340)||(3917771-3917895)
chr3 (215-340)||(24910287-24910411)
chr3 (212-340)||(29212062-29212191)
chr3 (215-296)||(40559679-40559759)
chr3 (215-296)||(48191099-48191179)
chr3 (215-296)||(2687564-2687644)
chr3 (215-296)||(30703095-30703176)
chr3 (212-257)||(33746058-33746103)
chr3 (215-296)||(47069011-47069092)
chr3 (211-267)||(2861052-2861108)
chr3 (221-340)||(3440736-3440855)
chr3 (215-279)||(6583295-6583358)
chr3 (209-340)||(10473913-10474043)
chr3 (215-279)||(27396859-27396922)
chr3 (215-279)||(28731852-28731915)
chr3 (215-279)||(44037504-44037567)
chr3 (244-334)||(46008868-46008959)
chr3 (215-279)||(47410812-47410875)
[»] scaffold0633 (1 HSPs)
scaffold0633 (211-310)||(3824-3922)
[»] chr6 (21 HSPs)
chr6 (215-336)||(1266744-1266866)
chr6 (212-322)||(2747551-2747662)
chr6 (215-273)||(7974774-7974831)
chr6 (215-296)||(8939631-8939711)
chr6 (209-340)||(9297755-9297887)
chr6 (215-296)||(9727499-9727580)
chr6 (215-279)||(8977159-8977223)
chr6 (215-279)||(10181050-10181113)
chr6 (215-279)||(16496712-16496776)
chr6 (215-340)||(12795018-12795142)
chr6 (215-296)||(1241600-1241680)
chr6 (215-296)||(2314642-2314722)
chr6 (215-296)||(4996877-4996957)
chr6 (211-248)||(23259578-23259615)
chr6 (215-296)||(31205226-31205306)
chr6 (215-340)||(735450-735572)
chr6 (215-279)||(2018822-2018886)
chr6 (215-279)||(4083592-4083655)
chr6 (215-326)||(4891013-4891123)
chr6 (215-279)||(17534583-17534646)
chr6 (215-279)||(32107895-32107958)
[»] scaffold1067 (1 HSPs)
scaffold1067 (206-279)||(2921-2994)
[»] scaffold0027 (1 HSPs)
scaffold0027 (208-293)||(19359-19444)
[»] scaffold0160 (1 HSPs)
scaffold0160 (262-335)||(22133-22207)
[»] scaffold0242 (2 HSPs)
scaffold0242 (215-296)||(15063-15143)
scaffold0242 (215-296)||(23898-23978)
[»] scaffold0013 (1 HSPs)
scaffold0013 (215-296)||(90574-90654)
[»] scaffold0457 (1 HSPs)
scaffold0457 (215-279)||(6784-6847)
[»] scaffold0024 (1 HSPs)
scaffold0024 (215-279)||(160452-160516)


Alignment Details
Target: chr8 (Bit Score: 312; Significance: 1e-176; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 1522483 - 1522822
Alignment:
Q  1 atcaccaaagtattcgtctgtgctgatttgaaagtcttcggtctcatcgttgctcaacttttcaaatggatttcttaaccacattacattagtgtcctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  1522483 atcaccaaagtattcgtctgtgctgatttgaaagtcttcggtctcatcgttgctcaacttttcaaatggatttcttaaccacattacatcagtgtcctac 1522582  T
Q  101 aaaattgaatgtgtgatgatgaattaggaatatttgaaaatggaattatgcaagtaaaattatataaactcaaaaagaaattattagtgagagtaaatat 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1522583 aaaattgaatctgtgatgatgaattaggaatatttgaaaatggaattatgcaagtaaaattatataaactcaaaaagaaattattagtgagagtaaatat 1522682  T
Q  201 tgatgtagtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacg 300  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  1522683 tgatgtagtctcataagtcctagctcaactggcaaaaataccgaaattgttaggccggacttcatgatcggggttcgaacctccatacctccactttacg 1522782  T
Q  301 tgtgtgagttacgatggctttgccatctcttctatttacc 340  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1522783 tgtgtgagttacgatggctttgccatctcttctatttacc 1522822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 1518135 - 1518301
Alignment:
Q  16 gtctgtgctgatttgaaagtcttcggtctcatcgttgctcaacttttcaaatggatttcttaaccacattacattagtgtcctgca-------------- 101  Q
    |||||||||||||||||  ||||| |||||||  |||||||| |||| |||||||||||||||||||||||||| |||||||||||                  
T  1518135 gtctgtgctgatttgaagatcttcagtctcattcttgctcaattttttaaatggatttcttaaccacattacatcagtgtcctgcatgcatgcagattgc 1518234  T
Q  102 aaattgaatgtgtgatgatgaattaggaatatttgaaaatggaattatgcaagtaaaattatataaa 168  Q
    | |||||||||||| | |||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  1518235 agattgaatgtgtggtaatgaattaggaatattagaaaatggaatgatgcaagtaaaaatatataaa 1518301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1512917 - 1513014
Alignment:
Q  1 atcaccaaagtattcgtctgtgctgatttgaaagtcttcggtctcatcgttgctcaacttttcaaatggatttcttaaccacattacattagtgtcct 98  Q
    |||||||| |||| |||||||||| ||||||| |||||| |||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  1512917 atcaccaaggtatacgtctgtgcttatttgaaggtcttctgtctcattcttgctcaacctttcaaatggatttcttaaccacattacatcagtgtcct 1513014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 31291216 - 31291287
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  31291216 gtctcataaatcctagcttaactgacaaaaatgccgaaattgttaggccgaacgtcatgatcggggttcgaa 31291287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 40418123 - 40418227
Alignment:
Q  206 tagtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgt 305  Q
    ||||||||||||| ||||||||||||  |||||| | |||||||||||| |  || |||||| ||| ||||||| | | |||||||||||||| ||||||    
T  40418123 tagtctcataagttctagctcaactggtaaaaatgctgaaattgttaggccagacgtcatgaccggagttcgaaccccgatacctccactttatgtgtgt 40418222  T
Q  306 gagtt 310  Q
    |||||    
T  40418223 gagtt 40418227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 28183839 - 28183740
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||| || | ||| ||| ||||||||||| | | | |||||||||||  |||||||||||    
T  28183839 tcataagtcttagctcaactgacaaaaatgccgaaattattaggccggatttcttgaccggggttcgaaccccgacacctccactttgtgtgtgtgagtt 28183740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 33128292 - 33128194
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||| ||||||||||  ||||||| | |||||||||||| ||||| |||||||||||||||||| | |  ||||||||||||  || ||||||||    
T  33128292 cataagtcatagctcaactagcaaaaatgctgaaattgttaggccgaacgtcatgatcggggttcgaaccccggtacctccactttgtgtatgtgagtt 33128194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 335
Target Start/End: Complemental strand, 24197959 - 24197831
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtg 306  Q
    ||||| ||||||||| |||||||| |||||||  ||||||| |||||||  ||  ||||||| || |||||| |||| |||||||||||||| |||||||    
T  24197959 gtctcgtaagtcctatctcaactggcaaaaatgtcgaaattattaggtctgacaacatgatcaggattcgaa-ctccgatacctccactttatgtgtgtg 24197861  T
Q  307 ag-ttacgatggctttgccatctcttctat 335  Q
    || ||| ||||| |||| ||||||||||||    
T  24197860 agtttatgatggttttgtcatctcttctat 24197831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 12320983 - 12321086
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||| ||||| ||| || | | ||||||| | | ||||||| |||||  | |||||    
T  12320983 agtctcataagtcctagctcaactgacaaaaatgtcaaaattgttaggccgaacgtcacgaccagagttcgaaccccgatacctctactttgtgcgtgtg 12321082  T
Q  307 agtt 310  Q
    ||||    
T  12321083 agtt 12321086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 31665235 - 31665157
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccac 294  Q
    ||||||||| |||||||| |||| || ||||||||||||| ||||| |||||||||||||||||| |||  |||||||||    
T  31665235 aagtcctagttcaactgataaaa-tatcgaaattgttaggccgaacgtcatgatcggggttcgaatctcggtacctccac 31665157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 340
Target Start/End: Original strand, 40216776 - 40216910
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccg-aaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||| || |  || ||||||||||||||| |     |||||||||||  |||||||    
T  40216776 gtctcataagtcctagctcaactggcaaaaatgccgaaaattgttaggccggatgtcttgatcggggttcgaatcctggcacctccactttgtgtgtgtg 40216875  T
Q  307 ag-ttacgatggctttgccatctcttctatttacc 340  Q
    || ||| |||||||||| ||| |||| ||| ||||    
T  40216876 agtttatgatggctttgtcatttcttttatgtacc 40216910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 3728449 - 3728369
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||| |||||||||||||||| || |||||||||||||||| |  ||||||| |||||||||| | | ||||||||||||    
T  3728449 aagtcccagctcaactgacaaaa-tatcgaaattgttaggtcggatgtcatgattggggttcgaaccccgatacctccactt 3728369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 37371773 - 37371701
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||||| ||  | ||||||| | |||||| ||||||||||| |||||||| |||||||||    
T  37371773 agtctcataagtcctagctaaatcggcaaaaatgctgaaattattaggtcgaacgtcatgatcagggttcgaa 37371701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 34906565 - 34906502
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggg 272  Q
    ||||||||||||||||||||||||||||||| |  ||||| || || ||||| |||||||||||    
T  34906565 tctcataagtcctagctcaactgacaaaaatgctaaaattctttggccgaacgtcatgatcggg 34906502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 25899303 - 25899225
Alignment:
Q  218 tcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| |||||||||||||||| |||||||||||||| || || |||||| ||||||| ||| |||  |||||| ||||    
T  25899303 tcctaactcaactgacaaaaatgccgaaattgttaggccggacgtcatgaccggggtttgaacctcggtacctctactt 25899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 27849866 - 27849742
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    |||||||| |||||||||||||||| |||||||||||||| || | | ||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  27849866 aagtcctaactcaactgacaaaaatgccgaaattgttaggccgga-tgcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 27849769  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  27849768 atggctttgccatttcgtctatctacc 27849742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 6229304 - 6229223
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||| | ||||||| || ||||| ||||| | ||| |||||||||| ||||||| | | ||||||||||||    
T  6229304 aagtcctagctcaacgggcaaaaatgccaaaattattaggccaaacatcatgatcggagttcgaaccccaatacctccactt 6229223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 18752347 - 18752409
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||| ||||||||||||  |||||||||||| |||||| || || |||||||||||||||    
T  18752347 aagtcctagttcaactgacaaa--taccgaaattgtaaggtcggacgtcgtgatcggggttcgaa 18752409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 11098197 - 11098134
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||| |||||||||||||| || ||||||||||||||||||  ||||||  ||||||||||    
T  11098197 aagtcctaactcaactgacaaaa-tatcgaaattgttaggtcgaatgtcatgactggggttcgaa 11098134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 31941158 - 31941047
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||| ||| |||| || ||||||| ||||||||||||||  | |  |||||||||||||||||| | | |||||||||| ||| ||||||||| |||      
T  31941158 aagtcttagttcaattggcaaaaatgccgaaattgttaggctggatgtcatgatcggggttcgaaccccgatacctccac-ttatgtgtgtgagtttata 31941060  T
Q  314 atggctttgccat 326  Q
    |||||||||||||    
T  31941059 atggctttgccat 31941047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 32778500 - 32778623
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtgag-tt 310  Q
    ||||||||||||| || || |||||||  | ||||| ||| |||| || |||||||||||||| ||| |||| |||||||||||||  ||||||| | ||    
T  32778500 ataagtcctagcttaagtggcaaaaatgtcaaaattattaagtcgtacgtcatgatcggggtttgaa-ctccgatacctccactttgtgtgtgtgggttt 32778598  T
Q  311 acgatggctttgccatctcttctat 335  Q
    | |||||||||| |||||| |||||    
T  32778599 atgatggctttgtcatctcgtctat 32778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 34839161 - 34839096
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||| |||||||||||||| |  | |||||||||||| |||| ||||||||| ||||||||    
T  34839161 cataagtcctatctcaactgacaaaagt--caaaattgttaggttgaacgtcatgatcgcggttcgaa 34839096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 37817378 - 37817461
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||||| |||||  || ||||||||||||||| |   ||||| ||||||||||| | | ||||||||||||    
T  37817378 cataagtcctagctcaactggcaaaatgac-gaaattgttaggtcggatgccatgaccggggttcgaaccccgatacctccactt 37817461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 33024231 - 33024196
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgt 250  Q
    |||||||| |||||||||||||||||||||||||||    
T  33024231 aagtcctaactcaactgacaaaaataccgaaattgt 33024196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 44604944 - 44604851
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||||||||| || ||||| | ||||||||||||||||| |   ||||||||||||||||| | |  ||||||||| ||| |||||||||||    
T  44604944 aagtcctagctcaattggcaaaa-tgccgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtt 44604851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 4430858 - 4430734
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  4430858 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 4430761  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  4430760 atggctttgccatttcgtctatctacc 4430734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 4977157 - 4977033
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || ||  ||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  4977157 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggaccccatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 4977060  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  4977059 atggctttgccatttcgtctatctacc 4977033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 6317305 - 6317429
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  6317305 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 6317402  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  6317403 atggctttgccatttcgtctatctacc 6317429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 10096617 - 10096741
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| | |||||  ||||||||||||| || |   ||||| ||||||||||| | | |||||||||| ||| ||||||||| |||      
T  10096617 aagtcctagctcaactggc-aaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccgatacctccac-ttatgtgtgtgagtttata 10096714  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  10096715 atggctttgccatttcgtctatctacc 10096741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 25063344 - 25063469
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||| ||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  25063344 aagtcctagttcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 25063442  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  25063443 atggctttgccatttcgtctatctacc 25063469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 34711678 - 34711554
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |   ||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  34711678 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 34711581  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  34711580 atggctttgccatttcgtctatctacc 34711554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 36442813 - 36442759
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatga 267  Q
    |||||||||| ||||||||| |||||| |||||||||||||| || || ||||||    
T  36442813 ataagtcctaactcaactgataaaaatgccgaaattgttaggccggacgtcatga 36442759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 44814868 - 44814992
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  44814868 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 44814965  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  44814966 atggctttgccatttcatctatctacc 44814992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 7772173 - 7772093
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||  |||| | |||||||||||||| || |  |||||||||||||||||| | |  |||||||||||    
T  7772173 aagtcctagctcaactggtaaaa-tgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccactt 7772093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 340
Target Start/End: Complemental strand, 13403524 - 13403418
Alignment:
Q  233 caaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttgccatctctt 331  Q
    |||||||| |||||||||||||  |||| |||| | ||| ||||||| | |  ||||||||||||  ||||||||| ||| ||||| ||| |||||||||    
T  13403524 caaaaatatcgaaattgttaggctgaacgtcataaccggagttcgaaccccggtacctccacttt--gtgtgtgagtttatgatggtttttccatctctt 13403427  T
Q  332 ctatttacc 340  Q
    |||| ||||    
T  13403426 ctatctacc 13403418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 36586487 - 36586567
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |   ||||| ||||||||||| | |  |||||||||||    
T  36586487 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccactt 36586567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 403671 - 403734
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||||||| |||| | ||||||||||||||||| |   ||||| |||||||||||    
T  403671 aagtcctagctcaactgataaaa-tgccgaaattgttaggtcggatgccatgaccggggttcgaa 403734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 8547253 - 8547160
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtgagtt 310  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  |||| | ||| ||||||| |||| |||||||||| ||| |||||||||||    
T  8547253 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgtcataaccggagttcgaa-ctccgatacctccac-ttatgtgtgtgagtt 8547160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 11021340 - 11021436
Alignment:
Q  214 taagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    ||||||||| |||||||  |||||||  ||||||| |||||||| || |||||| | | ||||||| | |  ||||||||||||  |||||||||||    
T  11021340 taagtcctaactcaactagcaaaaatgtcgaaattattaggtcggacgtcatgacctgagttcgaaccccggtacctccactttgtgtgtgtgagtt 11021436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 11637678 - 11637594
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccacttt 297  Q
    |||||||||||||||||||  ||||||  ||||||||||||| | ||| |  |||||||| |||||| | |  ||||||||||||    
T  11637678 ataagtcctagctcaactggaaaaaatgtcgaaattgttaggccaaacgttttgatcgggattcgaaccccagtacctccacttt 11637594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 30089963 - 30090027
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||| ||||||||||  ||||||| |||||||||||||  ||||   |||||||||||||||||    
T  30089963 aagtcatagctcaacttgcaaaaatgccgaaattgttagcccgaatgccatgatcggggttcgaa 30090027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 33067511 - 33067448
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   |||||||||||||||||    
T  33067511 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaa 33067448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 39068498 - 39068446
Alignment:
Q  244 aaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||| ||||| |||||||| || |||||| ||| ||||||||||||    
T  39068498 aaattgttaggccgaacgtcatgatcaggattcgaacctcaatacctccactt 39068446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 43129101 - 43129164
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||| |||||| || |||||||||||||||||||||||| |   |||||||||| ||||||    
T  43129101 aagtcctatctcaaccga-aaaaataccgaaattgttaggtcggatgccatgatcgggattcgaa 43129164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 340
Target Start/End: Original strand, 13491023 - 13491156
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| | || || |||||| ||||||||||| ||| |||||||||||||  ||||||||    
T  13491023 gtctcataagtcatagctcaactggcaaaaataccgaaattgttatgccggacgtcatgaccggggttcgaacctcaatacctccactttgtgtgtgtga 13491122  T
Q  308 g-ttacgatggctttgccatctcttctatttacc 340  Q
    | ||| | ||||||||||||||||||||| ||||    
T  13491123 gtttatggtggctttgccatctcttctatatacc 13491156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 329
Target Start/End: Original strand, 4793744 - 4793867
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcca-tacctccactttacgtgtgtg 306  Q
    ||||| |||||||||| ||||||||||||||| | ||||||||||||||| || |||||| ||| |||| || | ||| ||| | ||||||| |||||||    
T  4793744 gtctcgtaagtcctagttcaactgacaaaaatgctgaaattgttaggtcggacatcatgaccggagttcaaacccccagtacgtgcactttatgtgtgtg 4793843  T
Q  307 ag-ttacgatggctttgccatctc 329  Q
    || |||||||| ||||||||||||    
T  4793844 agtttacgatgactttgccatctc 4793867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 39417440 - 39417541
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtg 306  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| || |  |||||| ||||||||||| |||| ||| |||||||||| |||||||    
T  39417440 gtcttataggtcctagctcaactgacaaaaataccgaaattgttaggccggatgtcatga-cggggttcgaa-ctccgatatctccactttatgtgtgtg 39417537  T
Q  307 agtt 310  Q
    ||||    
T  39417538 agtt 39417541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 25219974 - 25219875
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaa-taccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    |||| |||||||||||||||| ||| ||||| | ||||||||||||||||| || |||||| |||||||| || | | |||||||||||||| |||||||    
T  25219974 gtcttataagtcctagctcaattgataaaaaatgccgaaattgttaggtcggacgtcatga-cggggttcaaatcccgatacctccactttatgtgtgtg 25219876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 11543923 - 11543798
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |   ||||||||||||| ||| | |  ||||||||| ||  ||||||||| |||      
T  11543923 aagtcctagctcaactggcaaaaatgccgaaattgttaggtcggatgccatgatcggggtttgaaccccggtacctccac-ttgtgtgtgtgagtttata 11543825  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  11543824 atggctttgccatttcgtctatctacc 11543798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 16178264 - 16178341
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctcca 293  Q
    |||||||||||||||||| |||||| ||||||||||||||| | ||  ||||||||||||||||| | | |||||||||    
T  16178264 aagtcctagctcaactga-aaaaatgccgaaattgttaggtaggacgccatgatcggggttcgaaccccaatacctcca 16178341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 37103323 - 37103441
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg-agtt 310  Q
    ||||||||||||||||||||||||||||  ||||||||||||  || || |||||| ||||||| ||| | | ||||||||  |||  ||||||| | ||    
T  37103323 cataagtcctagctcaactgacaaaaatgtcgaaattgttagaccggacatcatgaccggggtttgaaccccgatacctccgttttgtgtgtgtgaattt 37103422  T
Q  311 acgatggctttgccatctc 329  Q
    | |||| ||||||||||||    
T  37103423 atgatgactttgccatctc 37103441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 18368799 - 18368879
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  |||||||||||||||||| | |  |||||||||||    
T  18368799 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatatcatgatcggggttcgaaccccggtacctccactt 18368879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 340
Target Start/End: Original strand, 22999076 - 22999205
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||||| |  |||||| || ||||||||||  || || |||||| ||||||||||| | | | |||||||||||  ||||||||| ||    
T  22999076 cataagtcctagctcaacgggtaaaaatgccaaaattgttagtccggacgtcatgaccggggttcgaaccccgacacctccactttgtgtgtgtgagttt 22999175  T
Q  311 acgatggctttgccatctcttctatttacc 340  Q
    | ||||| |||| |||||| ||||| ||||    
T  22999176 atgatggttttgtcatctcgtctatctacc 22999205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 727412 - 727349
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |   |||||||||||||||||    
T  727412 aagtcctagctcaactgacaaaa-tgccgaaattgttaggtcggatgccatgatcggggttcgaa 727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 18741503 - 18741401
Alignment:
Q  234 aaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtgag-ttacgatggctttgccatctctt 331  Q
    |||||| |||||||||||||||||||| ||||||||| ||||| || ||||  ||||||||||||  ||||||||| ||| |||| ||||| |||||| |    
T  18741503 aaaaatgccgaaattgttaggtcgaacatcatgatcgaggttc-aaactccggtacctccactttgtgtgtgtgagtttatgatgactttgtcatctcgt 18741405  T
Q  332 ctat 335  Q
    ||||    
T  18741404 ctat 18741401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 32517943 - 32517828
Alignment:
Q  214 taagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttac 312  Q
    |||||||||| |||||||| ||||||  |||||||||||||  | || |||||| || |||||||| | |  ||||||||||||  ||||||||| |||     
T  32517943 taagtcctagttcaactgataaaaatgtcgaaattgttaggctggacgtcatgaccgaggttcgaaccccggtacctccactttgtgtgtgtgagtttat 32517844  T
Q  313 gatggctttgccatct 328  Q
    |||| |||||||||||    
T  32517843 gatgactttgccatct 32517828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 4014936 - 4014812
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||||| ||||| |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  4014936 aagtcctagctcaactgac-aaaatgccgaaattgttaggccggatctcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 4014839  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  4014838 atggctttgccatttcgtctatctacc 4014812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 40812022 - 40812146
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    |||||||| |||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||| | |  ||||| ||| ||| ||||||||| |||      
T  40812022 aagtcctacctcaactgacaaaa-tgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtaccttcac-ttatgtgtgtgagtttata 40812119  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  40812120 atggctttgccatttcgtctatctacc 40812146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 12541440 - 12541379
Alignment:
Q  235 aaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| |||  ||||| |||||    
T  12541440 aaaataccgaaattgttaggtcggatgtcatgatcggggttcgaacctcggtaccttcactt 12541379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 13268098 - 13268018
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  |||||| ||||||||||| | |  |||||||||||    
T  13268098 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt 13268018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 34242574 - 34242494
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||| |||| | |||||||||||||| || |  |||||||||||||||||| | |  |||||||||||    
T  34242574 aagtcctagctcaactgataaaa-tgccgaaattgttaggccggatatcatgatcggggttcgaaccccggtacctccactt 34242494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 38463144 - 38463224
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||| |  | |||||||||||||||| | | ||||||||||||    
T  38463144 aagtcttagctcaactggcaaaa-tgccgaaattgttaggtcggatgttatgatcggggttcgaaccccgatacctccactt 38463224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 42160380 - 42160300
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||||||||||||||| | |  |||||||||||    
T  42160380 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccactt 42160300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 42200985 - 42200905
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | || ||||||||||| || |  |||||||||||||||||| |||  |||||||||||    
T  42200985 aagtcctagctcaactggcaaaa-tgccaaaattgttaggccggatgtcatgatcggggttcgaacctcggtacctccactt 42200905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 3680855 - 3680927
Alignment:
Q  208 gtctcataagtcctagctcaactgac-aaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||||||||||| | | |||||| | ||||||||||||||  || |||||| |||||||||||    
T  3680855 gtctcataagtcctagctcaaccggcaaaaaatgcagaaattgttaggtcagacgtcatgaccggggttcgaa 3680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 43035445 - 43035508
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||| || ||||| |||||||||||||||| || |  ||||||||||||||||||    
T  43035445 aagtcctagctcaattggcaaaa-taccgaaattgttaggccggatgtcatgatcggggttcgaa 43035508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 816351 - 816471
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||| ||||||||||| ||||||| || ||||||||||||||    |||||| |  |||||||| | |  ||| ||||||||  ||||||||| ||    
T  816351 cataagtcatagctcaactggcaaaaatgccaaaattgttaggtcg----tcatgaccatggttcgaaccccggtacatccactttgtgtgtgtgagttt 816446  T
Q  311 acgatggctttgccatctcttctat 335  Q
    | ||||| ||||||||||| |||||    
T  816447 atgatggttttgccatctcgtctat 816471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 9993171 - 9993238
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||  |||||||||||||||||||  ||||||||||| | || || |||| |||||||||||||    
T  9993171 cataagttatagctcaactgacaaaaatgtcgaaattgttaagccggacgtcataatcggggttcgaa 9993238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 21840571 - 21840448
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||||||||  |  ||||||||||| || | |  |||||||||||||||||| | | |||||||||| ||  ||| ||||| |||      
T  21840571 aagtcctagctcaactgacaaatgt--cgaaattgttaagttggatatcatgatcggggttcgaatcccgatacctccac-ttgtgtgggtgagtttata 21840475  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| |||||||| ||||    
T  21840474 atggctttgccatttcttctatctacc 21840448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 20251608 - 20251484
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   ||||||||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  20251608 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 20251511  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  20251510 atggctttgccatttcgtctatctacc 20251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 31223776 - 31223905
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaa--taccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag 308  Q
    |||||||| ||||||||||||| |||||  || |||||||||||||  | || ||||||||| | ||| || | |  ||| | |||| || |||||||||    
T  31223776 tcataagttctagctcaactgataaaaaattatcgaaattgttaggctggacatcatgatcgagattcaaatcccggtactttcactctatgtgtgtgag 31223875  T
Q  309 tt-acgatggctttgccatctcttctattt 337  Q
    || | ||| |||||||||||||||||||||    
T  31223876 tttaggatagctttgccatctcttctattt 31223905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 40710967 - 40710877
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccacttt 297  Q
    |||| ||||||||||||||||| || |||||||||||||||  ||||   | || |||||| ||||||||||| | |  ||||||||||||    
T  40710967 agtcccataagtcctagctcaattggcaaaaataccgaaataattagagtggacgtcatgaccggggttcgaaccccggtacctccacttt 40710877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 2287432 - 2287352
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  2287432 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatatcatgaccggggttcgaaccccggtacctccactt 2287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 15897219 - 15897299
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  15897219 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccactt 15897299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 23080221 - 23080141
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  23080221 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccactt 23080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 25994779 - 25994718
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccg-aaattgttaggtcgaacttcatgatcggg 272  Q
    |||||||| ||||||||||||||||||||| | |||||||||| ||| || | |||||||||    
T  25994779 cataagtcatagctcaactgacaaaaatactgaaaattgttagatcggacgttatgatcggg 25994718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 16368811 - 16368752
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggtt 275  Q
    ||||||||||||| ||| ||||| |||||||||||||||| || |  ||||||||||||||    
T  16368811 aagtcctagctcatctggcaaaa-taccgaaattgttaggccggatgtcatgatcggggtt 16368752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 19967738 - 19967832
Alignment:
Q  214 taagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||||||||||||| | |||||||||||||||||| | |||||  ||| |||  ||||||||   | |||||||||| || ||||||||||||    
T  19967738 taagtcctagctcaactggc-aaaataccgaaattgttaagccgaacgccattatcaaggttcgaattccgatacctccac-ttgcgtgtgtgagtt 19967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 30854859 - 30854795
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||| ||||||||| ||||||  ||||||||||||| ||||  |||||| ||||| |||||    
T  30854859 aagtcctaactcaactgataaaaatgtcgaaattgttaggacgaatgtcatgaccggggctcgaa 30854795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 40592318 - 40592381
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |   ||||| |||||||||||    
T  40592318 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgccatgaccggggttcgaa 40592381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 207 - 329
Target Start/End: Original strand, 24870593 - 24870716
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| || || | |||| || |||||||| |||  |||||||||||||||||||||    
T  24870593 agtctcataagtcctagctcaactggcaaaaatgccgaaattgttaggccggacgtaatgaccgaggttcgaacctcggtacctccactttacgtgtgtg 24870692  T
Q  307 ag-ttacgatggctttgccatctc 329  Q
    || ||| |||||||||||||||||    
T  24870693 agtttatgatggctttgccatctc 24870716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 335
Target Start/End: Original strand, 46343326 - 46343454
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| || || |||||| ||||||||||| |    |||||||| |||||||||||||    
T  46343326 gtctcataagtcctagctcaactgacaaaagtgccgaaattgttaggccggacgtcatgaccggggttcgaaccctagtacctccattttacgtgtgtga 46343425  T
Q  308 g-ttacgatggctttgccatctcttctat 335  Q
    | ||| |||| ||||| ||||||||||||    
T  46343426 gtttatgatgactttgtcatctcttctat 46343454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 335
Target Start/End: Original strand, 37759424 - 37759554
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatc-ggggttcgaagctccatacctccactttacgtgtgt 305  Q
    ||||||||||||| ||||||||||| ||||||| | |||||||||||  || || |||||||| |||||||||| ||| || ||||||||||  ||||||    
T  37759424 agtctcataagtcatagctcaactggcaaaaatgctgaaattgttagaccggacgtcatgatcgggggttcgaacctcgattcctccactttgtgtgtgt 37759523  T
Q  306 gag-ttacgatggctttgccatctcttctat 335  Q
    ||| ||| |||||||||| ||||||||||||    
T  37759524 gagtttatgatggctttgtcatctcttctat 37759554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 13849353 - 13849455
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||  || || ||||||||||||||| | | | |||||||||||  ||||| ||    
T  13849353 gtctcataagtcctagctcaactgacaaaaatgtcgaaattgttaggtcagacgtcttgatcggggttcgaaccccgacacctccactttgtgtgtggga 13849452  T
Q  308 gtt 310  Q
    |||    
T  13849453 gtt 13849455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 9696410 - 9696321
Alignment:
Q  221 tagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||| || |||||||  ||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||| |||||| ||||    
T  9696410 tagctcaattggcaaaaatgtcgaaattgttaggtcgaacgttatgatcggggttcgaacctcggtacctccactttatgtgtgtaagtt 9696321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 340
Target Start/End: Original strand, 28758375 - 28758507
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag 308  Q
    |||||||| |||||| ||||||| ||||||| |||||||| |||||||| || |||||| ||| ||||||| | |  ||||||||||||  |||||||||    
T  28758375 tctcataaatcctagttcaactggcaaaaatgccgaaattattaggtcggacgtcatgaccggagttcgaaccccagtacctccactttgtgtgtgtgag 28758474  T
Q  309 -ttacgatggctttgccatctcttctatttacc 340  Q
     |||  ||| |||||| ||||||||||| ||||    
T  28758475 tttataatgactttgcaatctcttctatctacc 28758507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 54086016 - 54086096
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |   ||||||||||||||||| | | ||||||||||||    
T  54086016 aagtcctagctcaactgacaaaa-taccgaaattgttaagtcggataccatgatcggggttcgaaccccaatacctccactt 54086096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 22717095 - 22717194
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||| ||||||| || |||||| |||||||||  ||||||||||||||||||| |||||||  | ||||||| | | ||||||| |||||| ||||||||    
T  22717095 gtcttataagtcttaactcaaccgacaaaaatgtcgaaattgttaggtcgaacgtcatgattagagttcgaaccccgatacctctactttatgtgtgtga 22717194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 37340238 - 37340137
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||||||| |||||||| ||||||  ||||||||||||| ||||| ||||||||  |||||||| | |  || |||||||||  ||||||||    
T  37340238 gtctcataagtcctagttcaactgataaaaatgtcgaaattgttaggccgaacgtcatgatc-aggttcgaaccacggtatctccactttgtgtgtgtga 37340140  T
Q  308 gtt 310  Q
    |||    
T  37340139 gtt 37340137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 50981829 - 50981783
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  50981829 gtctcataagtcctaactcaactgacaaaaatgccgaaattgttagg 50981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 3084365 - 3084285
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |   ||||||||||||||||| | | ||||||||||||    
T  3084365 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgccatgatcggggttcgaatcccgatacctccactt 3084285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 29428060 - 29428140
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| |||||||||||||||| || |  |||||||||||||||||| | |  |||||||||||    
T  29428060 aagtcctagctcaactggcaaaa-taccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccactt 29428140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 3803038 - 3802987
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttc 263  Q
    ||||||||||| |||||||||||||||| |||||||| ||||| ||||||||    
T  3803038 cataagtcctaactcaactgacaaaaatgccgaaattattaggccgaacttc 3802987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 22988122 - 22988023
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||| ||||||| || |||||| |||||||||  ||||||||||||||||||| ||||||   | ||||||| | | ||||||| |||||| ||||||||    
T  22988122 gtcttataagtcttaactcaaccgacaaaaatgtcgaaattgttaggtcgaacgtcatgactagagttcgaaccccgatacctctactttatgtgtgtga 22988023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 338
Target Start/End: Complemental strand, 38944508 - 38944381
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||| ||| ||||||  |||||||| |||||||||||||| | || ||| || |  |||||||| | | |||||||||||||| || |||||| ||    
T  38944508 cataagtcgtagttcaactagcaaaaatatcgaaattgttaggttggacgtcaagaccctggttcgaaccccaatacctccactttatgtatgtgagttt 38944409  T
Q  311 acgatggctttgccatctcttctattta 338  Q
    | ||||| |||| |||||| ||||||||    
T  38944408 atgatggttttgtcatctcgtctattta 38944381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 8810891 - 8810829
Alignment:
Q  217 gtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||||||||| |||||||| |||||||| |  |||||| ||| |||||||    
T  8810891 gtcctagctcaactgacaaaaatgccgaaattattaggtcggatgtcatgaccggagttcgaa 8810829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 13389025 - 13389149
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | | ||||||||||||||| |  |||||| ||||||||||| | |  ||||||||| ||| ||||||||| |||      
T  13389025 aagtcctagctcaactggcaaaa-tgctgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttata 13389122  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  13389123 atggctttgccatttcgtctatctacc 13389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 37166143 - 37166267
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||||||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  37166143 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 37166240  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  37166241 atggctttgccatttcgtctatctacc 37166267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 1083513 - 1083593
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||| ||||||| ||||| | ||||||||||||||||  |  |||||||||||||||||| | | ||||||||||||    
T  1083513 aagtcctagttcaactggcaaaa-tgccgaaattgttaggtcagatgtcatgatcggggttcgaaccccgatacctccactt 1083593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 1100872 - 1100823
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcg 257  Q
    |||||||||||||||||||||||   ||||||||||||||| ||||||||    
T  1100872 gtctcataagtcctagctcaactaggaaaaataccgaaattattaggtcg 1100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 24712093 - 24712173
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  |||||| ||||||||||| | |  |||||||||||    
T  24712093 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt 24712173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 36752364 - 36752444
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||| |||||||||||||| | |||||||||||||| |  |  |||||||||||||||||| | | ||||||||||||    
T  36752364 aagtcctaactcaactgacaaaa-tgccgaaattgttaggccagatgtcatgatcggggttcgaaccccgatacctccactt 36752444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 17480936 - 17481000
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||| |||||||||||||||||||| || ||||||||||| ||||   ||||||| |||||||||    
T  17480936 aagttctagctcaactgacaaaaatgccaaaattgttaggccgaatgccatgatcagggttcgaa 17481000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 579362 - 579246
Alignment:
Q  218 tcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatg 316  Q
    ||||||||||||||| |||| |  ||||||||||||| || |  |||||||||||||||||| | |  ||||||||| ||| ||||||||| |||  |||    
T  579362 tcctagctcaactgataaaa-tgtcgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatg 579265  T
Q  317 gctttgccatctcttctat 335  Q
    |||||||||| || |||||    
T  579264 gctttgccatttcgtctat 579246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 30044707 - 30044583
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   ||||||||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  30044707 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 30044610  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  30044609 atggctttgccatttcgtctatctacc 30044583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 5397063 - 5396983
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  5397063 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccactt 5396983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 24550818 - 24550898
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||| | |||||||||||||| || |  |||||||||||||||||| | |  |||||||||||    
T  24550818 aagtcttagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccactt 24550898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 41293189 - 41293148
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgtta 252  Q
    |||||||| ||||||||||||||||||||  |||||||||||    
T  41293189 tcataagttctagctcaactgacaaaaatgtcgaaattgtta 41293148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 42154261 - 42154181
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  42154261 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccactt 42154181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 340
Target Start/End: Original strand, 46107398 - 46107523
Alignment:
Q  216 agtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg-agttacga 314  Q
    |||||||| |||||||| ||||||  | ||||| |||| ||  || ||||||||| | |||||| | | |||||||||||||| ||||||| | ||| ||    
T  46107398 agtcctagttcaactgataaaaatgtcaaaattattagatcagacgtcatgatcgagattcgaaccccgatacctccactttatgtgtgtgaatttatga 46107497  T
Q  315 tggctttgccatctcttctatttacc 340  Q
    ||  ||||||| ||||||||| ||||    
T  46107498 tgaatttgccaactcttctatctacc 46107523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 297
Target Start/End: Original strand, 47585358 - 47585443
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccacttt 297  Q
    ||||| |||||| |||| || ||||||| | |||||||||||||||||| | | || | || |||||| ||| |||||||||||||    
T  47585358 cataattcctagttcaattggcaaaaatgctgaaattgttaggtcgaacgttaagacctggattcgaacctcgatacctccacttt 47585443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 9569480 - 9569543
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| |||||||||||    
T  9569480 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaa 9569543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 12821170 - 12821292
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   ||||| ||||||||||| | |  |||||||||||   ||||||||| |||      
T  12821170 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccactt---gtgtgtgagtttata 12821265  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  12821266 atggctttgccatttcgtctatctacc 12821292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 17815265 - 17815214
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatga 267  Q
    ||||||||| ||||||| ||||| | |||||||||||||||||||| ||||||    
T  17815265 aagtcctagttcaactggcaaaa-tgccgaaattgttaggtcgaacgtcatga 17815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 33416703 - 33416640
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| |||||||||||||||  || |  |||||||| |||||||||    
T  33416703 aagtcctagctcaactggcaaaa-taccgaaattgttagaccggatgtcatgatcagggttcgaa 33416640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 33840624 - 33840688
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||  ||||||| |||||||| ||||| || ||  ||| |||||||||||||    
T  33840624 aagtcctagctcaactagcaaaaatgccgaaattattaggccggacgccataatcggggttcgaa 33840688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 40379709 - 40379757
Alignment:
Q  262 tcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||||    
T  40379709 tcatgaccggggttcgactctcaatacctccactttatgtgtgtgagtt 40379757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 42856568 - 42856631
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   |||||||||||||||||    
T  42856568 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaa 42856631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 49535890 - 49535953
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   |||||||||||||||||    
T  49535890 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaa 49535953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 55853438 - 55853398
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggt 255  Q
    ||||||||||||||||| ||||||| || ||||||||||||    
T  55853438 aagtcctagctcaactggcaaaaatgccaaaattgttaggt 55853398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 340
Target Start/End: Complemental strand, 46021562 - 46021429
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| || |  |||||| ||||||||||| | |  |||||||| |||  ||||||||    
T  46021562 gtctcataagtcctagctcaactgataaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccattttgtgtgtgtga 46021463  T
Q  308 g-ttacgatggctttgccatctcttctatttacc 340  Q
    | ||| ||||||||||||||||||||||| ||||    
T  46021462 gtttatgatggctttgccatctcttctatctacc 46021429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 24333342 - 24333470
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcca-tacctccactttacgtgtgtg-agt 309  Q
    ||||||||||||||||||| ||||||||  ||||||||||||| ||| | |||||||||||||||||| ||||| ||||||||||||| ||||| | | |    
T  24333342 cataagtcctagctcaacttacaaaaatgtcgaaattgttaggccgagcgtcatgatcggggttcgaa-ctccagtacctccactttatgtgtgcgaact 24333440  T
Q  310 tacgatggctttgccatctcttctatttac 339  Q
    || ||||| |||| ||||||||||||||||    
T  24333441 tatgatggttttgtcatctcttctatttac 24333470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 340
Target Start/End: Complemental strand, 41708674 - 41708542
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    |||||||||| ||||||||||||||| ||||||  | |||||||||||||| |  | |||||||||||||||| | | |||||||||||||  || ||||    
T  41708674 agtctcataaatcctagctcaactgataaaaatgtcaaaattgttaggtcggatgttatgatcggggttcgaaccccgatacctccacttt--gtatgtg 41708577  T
Q  307 ag-ttacgatggctttgccatctcttctatttacc 340  Q
    || ||| ||||||||| ||||||||||||| ||||    
T  41708576 agtttatgatggctttaccatctcttctatctacc 41708542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 340
Target Start/End: Complemental strand, 9506973 - 9506840
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtg 306  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||| || || |||||| || |||||||| ||||  ||||||||||||  |||||||    
T  9506973 gtctcataagtcctagcttaactgacaaaaatatcaaaattgttaggccggacatcatgaccgaggttcgaa-ctccggtacctccactttgtgtgtgtg 9506875  T
Q  307 ag-ttacgatggctttgccatctcttctatttacc 340  Q
    || ||| |||||| || ||||||||||||| ||||    
T  9506874 agtttatgatggccttaccatctcttctatctacc 9506840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 6328307 - 6328181
Alignment:
Q  206 tagtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgt 305  Q
    |||||||||||||| ||||||||||| |||||||  | |||||||||||| | || ||||||   ||||||||| | | |||||||||||||| ||||||    
T  6328307 tagtctcataagtcttagctcaactggcaaaaatgtcaaaattgttaggttggacgtcatgactagggttcgaaccccgatacctccactttatgtgtgt 6328208  T
Q  306 gag-ttacgatggctttgccatctctt 331  Q
    ||| ||| ||||| |||| ||||||||    
T  6328207 gagtttatgatggttttgtcatctctt 6328181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 44136258 - 44136156
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa-gctccatacctccactttacgtgtgtga 307  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||  ||| | ||| |||||||  ||| |||||||||||||  ||||||||    
T  44136258 tctcataagttccagctcaactggcaaaaataccgaaattgttaggtcgaacgacataaccggagttcgaaccctcgatacctccactttgtgtgtgtga 44136159  T
Q  308 gtt 310  Q
    |||    
T  44136158 gtt 44136156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 46911038 - 46910937
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag 308  Q
    ||||||||||  ||| ||||||| |||||||| ||||| ||||||| ||||| |||||||||||||||||| |||  |||||| |||||  |||| ||||    
T  46911038 tctcataagttatagttcaactggcaaaaatatcgaaactgttaggccgaacgtcatgatcggggttcgaacctcggtacctcaactttgtgtgtctgag 46910939  T
Q  309 tt 310  Q
    ||    
T  46910938 tt 46910937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 340
Target Start/End: Complemental strand, 12645431 - 12645296
Alignment:
Q  206 tagtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgt 305  Q
    ||||||||||||| |||| ||||||| |||||||  ||||||||||||| || || | |||| || |||||||| | |  ||||||||||||| ||||||    
T  12645431 tagtctcataagttctagttcaactgccaaaaatgtcgaaattgttaggccggacgtaatgaccgaggttcgaacccctgtacctccactttatgtgtgt 12645332  T
Q  306 gag-ttacgatggctttgccatctcttctatttacc 340  Q
    | | ||| ||||| |||| |||||| ||||| ||||    
T  12645331 gggtttatgatggttttgtcatctcgtctatctacc 12645296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 47086427 - 47086360
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||||||||||||||  ||||||||||||| || |   |||||||||||||||||    
T  47086427 cataagtcctagctcaactgacaaaaatgtcgaaattgttaggccggatgccatgatcggggttcgaa 47086360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 340
Target Start/End: Complemental strand, 12961956 - 12961822
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    |||||||||||||||| |||||||   ||||||   |||||||||||| || || |||||||||| ||||||| |||  ||||| || |||  |||||||    
T  12961956 agtctcataagtcctaactcaactagtaaaaatgtagaaattgttaggccggacatcatgatcggagttcgaacctcggtaccttcaatttgtgtgtgtg 12961857  T
Q  307 ag-ttacgatggctttgccatctcttctatttacc 340  Q
    || ||| |||| ||||| |||||||||||| ||||    
T  12961856 agtttatgatgactttgtcatctcttctatctacc 12961822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 43133227 - 43133146
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||| || ||||||||||||||||||||||  |||  |||||| ||||||||||| | |  |||||||||||    
T  43133227 aagtcctagctcaaatggcaaaaataccgaaattgttaggctgaatgtcatgaccggggttcgaaccccggtacctccactt 43133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 35289847 - 35289963
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctc-catacctccactttacgtgtgtgag-t 309  Q
    ||||||| || ||||||||||||||||| | ||||||||||||||  || ||||||| |||||||||| |||   |||||||| |||  ||||||||| |    
T  35289847 cataagttctggctcaactgacaaaaatgctgaaattgttaggtcagacgtcatgattggggttcgaa-ctctggtacctccatttt--gtgtgtgagtt 35289943  T
Q  310 tacgatggctttgccatctc 329  Q
    || |||||||||||||||||    
T  35289944 tatgatggctttgccatctc 35289963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 8059842 - 8059913
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||| |||||| || |||||||  | ||||||||||||||  | ||||||||||||||||||    
T  8059842 gtctcataagtcctggctcaattggcaaaaatgtcaaaattgttaggtcgggcgtcatgatcggggttcgaa 8059913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 336
Target Start/End: Complemental strand, 30102781 - 30102678
Alignment:
Q  233 caaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagttacgatggctttgccatctcttc 332  Q
    ||||||| | |||||| ||||| || || ||||||||||| || ||| |||  ||||||||||||  |||||| ||||| ||||| |||| |||||||||    
T  30102781 caaaaatgctgaaattattaggccggacgtcatgatcgggatttgaacctcggtacctccactttgtgtgtgttagttatgatggatttgtcatctcttc 30102682  T
Q  333 tatt 336  Q
    ||||    
T  30102681 tatt 30102678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 30627630 - 30627709
Alignment:
Q  217 gtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||||||||  |||||||||||| ||| |  ||||||||| |||||||| | |  |||||||||||    
T  30627630 gtcctagctcaactgacaaaaatgtcgaaattgttagatcggatgtcatgatcgaggttcgaaccccggtacctccactt 30627709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 40013268 - 40013307
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  40013268 aagtcctagctcaactgacaaaaatgccgaaattgttagg 40013307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 340
Target Start/End: Original strand, 8037545 - 8037674
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcca-tacctccactttacgtgtgtgag-t 309  Q
    ||||| ||||| || |||||  ||||||||||||||| |||||| | || |||||||||| ||||||| ||||| |||||||| |||| |||| |||| |    
T  8037545 cataaatcctaacttaactggtaaaaataccgaaattattaggttggacgtcatgatcggagttcgaa-ctccagtacctccattttatgtgtatgagtt 8037643  T
Q  310 tacgatggctttgccatctcttctatttacc 340  Q
    || ||||  ||||||||||| ||||| ||||    
T  8037644 tatgatgattttgccatctcgtctatctacc 8037674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 35157207 - 35157083
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||| ||||||||| |||      
T  35157207 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttata 35157110  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  35157109 atggctttgccatttcgtctatctacc 35157083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 340
Target Start/End: Complemental strand, 45957462 - 45957332
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-t 309  Q
    |||||||||||||||||| || ||||||| || |||||||||   || || |||||||| ||||||||| | |  ||||||||||||  |||||| || |    
T  45957462 tcataagtcctagctcaattggcaaaaatgccaaaattgttaaaccggacgtcatgatcagggttcgaaccccggtacctccactttgtgtgtgttagtt 45957363  T
Q  310 tacgatggctttgccatctcttctatttacc 340  Q
    || || | ||||| |||||||||||| ||||    
T  45957362 tatgaagactttgtcatctcttctatctacc 45957332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 340
Target Start/End: Original strand, 22702392 - 22702524
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg- 306  Q
    |||||||||||| ||||||||||| ||||| |  ||||||||||| |||| || | |||||||||| ||||| |   |||||||||||||  ||| |||     
T  22702392 gtctcataagtcatagctcaactggcaaaattgtcgaaattgttaagtcggacgt-atgatcggggctcgaaccctgatacctccactttgtgtgcgtga 22702490  T
Q  307 agttacgatggctttgccatctcttctatttacc 340  Q
    | ||| |||||||||| ||||| |||||| ||||    
T  22702491 atttatgatggctttgtcatcttttctatctacc 22702524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 36251663 - 36251780
Alignment:
Q  224 ctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttg 322  Q
    |||||||||||||||| | |||||||||||| || || |||||  || |||||||| | |  ||  ||||||||| ||||||||| ||| ||||| ||||    
T  36251663 ctcaactgacaaaaatgctgaaattgttaggccggacgtcatggccgaggttcgaaccccggtatttccactttatgtgtgtgagtttatgatggttttg 36251762  T
Q  323 ccatctcttctatttacc 340  Q
    ||||||| ||||| ||||    
T  36251763 ccatctcgtctatctacc 36251780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 45236935 - 45237015
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | | ||||||||||||    
T  45236935 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccgatacctccactt 45237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 12964625 - 12964581
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgtt 251  Q
    |||||||||||||||||||||||||  |||||| |||||||||||    
T  12964625 agtctcataagtcctagctcaactggtaaaaatgccgaaattgtt 12964581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 2354920 - 2354794
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt-tacgtgtgtgag-ttac 312  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||| ||||||| | | |||||||||||| |  ||||||||| |||     
T  2354920 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggagttcgaaccccgatacctccacttgtgtgtgtgtgagtttat 2354822  T
Q  313 gatggctttgccatctcttctatttacc 340  Q
     ||||||||||||| || ||||| ||||    
T  2354821 aatggctttgccatttcgtctatctacc 2354794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 32251458 - 32251365
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    ||||||||| ||||||| ||||| | |||||||||||| |||| |  |||||| ||||||||||| | | |||||||||| ||| |||||||||||    
T  32251458 aagtcctagttcaactggcaaaa-tgccgaaattgttaagtcggatgtcatgaccggggttcgaaccccgatacctccac-ttatgtgtgtgagtt 32251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 4227358 - 4227419
Alignment:
Q  235 aaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||||||||| |   ||||||||||||||||| | |  |||||||||||    
T  4227358 aaaataccgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacctccactt 4227419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 10422483 - 10422563
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||| || |||||||||||||||| |   ||||||||||||||||| | |  |||||||||||    
T  10422483 aagtcttagctcaactggcaaaa-tatcgaaattgttaggtcggatgccatgatcggggttcgaatcccggtacctccactt 10422563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 30215895 - 30215838
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcat 265  Q
    |||||||||||| |||||||||| |||||||||   |||||||||| | |||||||||    
T  30215895 gtctcataagtcatagctcaactaacaaaaatattaaaattgttagtttgaacttcat 30215838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 37938162 - 37938097
Alignment:
Q  243 gaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag 308  Q
    ||||||||||||||  || |||||||||| |||| ||  || |||||||||||||| |||||||||    
T  37938162 gaaattgttaggtcagacgtcatgatcggtgttcaaacatcaatacctccactttatgtgtgtgag 37938097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 39580621 - 39580552
Alignment:
Q  267 atcggggttcgaagctccatacctccactttacgtgtgtga-gttacgatggctttgccatctcttctat 335  Q
    ||||||||||||| | |  ||||||||||||| ||||||||  ||| ||||| |||||||||||||||||    
T  39580621 atcggggttcgaatcccagtacctccactttatgtgtgtgattttatgatggttttgccatctcttctat 39580552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 1869820 - 1869884
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||||| |||| ||||||||| || |   ||||| |||||||||||    
T  1869820 aagtcctagctcaactggcaaaaatgccgatattgttaggccggatgccatgaccggggttcgaa 1869884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 6030764 - 6030724
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttag 253  Q
    |||||||||||||||||| ||||||||  ||||||||||||    
T  6030764 ataagtcctagctcaactaacaaaaatgtcgaaattgttag 6030724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 32134302 - 32134262
Alignment:
Q  214 taagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    |||||||||| |||| |||||||||| ||||||||||||||    
T  32134302 taagtcctagatcaattgacaaaaatgccgaaattgttagg 32134262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 37117968 - 37117905
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||||| |||||   ||||||||||||||| |   |||||||||||||||||    
T  37117968 aagtcctagctcaactgac-aaaatgttgaaattgttaggtcggatgccatgatcggggttcgaa 37117905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 40677022 - 40677086
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||| |||| || ||||||| || ||||||||||| |||||  ||||| |||||||||||    
T  40677022 aagtcctagttcaattggcaaaaatgccaaaattgttaggccgaacaccatgaccggggttcgaa 40677086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 46274949 - 46275033
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||| |||||||||| |  |||||| ||||||||||||||||| |   ||||| ||||||||||| | |  |||||||||||    
T  46274949 cataagttctagctcaaccggtaaaaatgccgaaattgttaggtcggatgccatgaccggggttcgaatcccggtacctccactt 46275033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 48729807 - 48729744
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  ||||||||| ||||||||    
T  48729807 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcgtggttcgaa 48729744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 16643807 - 16643899
Alignment:
Q  17 tctgtgctgatttgaaagtcttcggtctcatcgttgctcaacttttcaaatggatttcttaaccacattacattagtgtcctgcaaaattgaat 110  Q
    |||||||||||||||| |||||| || |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  16643807 tctgtgctgatttgaaggtcttcagtttcattgttgctcaacttttcaaatggatttcgtaaccacattacatcagtgtcctg-aaaattgaat 16643899  T

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Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 335
Target Start/End: Complemental strand, 7204635 - 7204511
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||| ||||||||||| | | |||||||||||||  || |||||| ||    
T  7204635 cataagtcctagctcaactggcaaaaatgccgaaattgttaggccgaacatcatgaccggggttcgaaccccgatacctccactttgtgtatgtgagttt 7204536  T
Q  311 acgatggctttgccatctcttctat 335  Q
    | | |||||||||||| ||||||||    
T  7204535 atggtggctttgccatgtcttctat 7204511  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 340
Target Start/End: Complemental strand, 44836251 - 44836116
Alignment:
Q  206 tagtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgt 305  Q
    ||||| ||||||||||||| |||||| |||||||| | |||||||||||||| || |||||||||||||||||| | |  || ||||||||||  |||||    
T  44836251 tagtcccataagtcctagcacaactggcaaaaatatcaaaattgttaggtcggacgtcatgatcggggttcgaaccccggtatctccactttatatgtgt 44836152  T
Q  306 gag-ttacgatggctttgccatctcttctatttacc 340  Q
    ||| ||| |||||||||| |||||| ||||| ||||    
T  44836151 gagtttatgatggctttgtcatctcatctatctacc 44836116  T

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Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 27868274 - 27868399
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg 306  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| || || || ||  |||||||| || |||  ||| ||||||||  |||||||    
T  27868274 agtctcataactcctagctcaactgacaaaaataccgaaattgttaggccggacgtcttggccggggttcaaacctcggtacttccactttgtgtgtgtg 27868373  T
Q  307 ag-ttacgatggctttgccatctctt 331  Q
    || ||| |||||||||||||| ||||    
T  27868374 agtttatgatggctttgccatttctt 27868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 340
Target Start/End: Complemental strand, 8312659 - 8312526
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||||||| ||||| |||||||||  ||||||||||||| ||||| | ||||||| |||||||| | |  ||||||||||||  ||| ||||    
T  8312659 gtctcataagtcctagttcaacggacaaaaatgtcgaaattgttaggccgaacgttatgatcgaggttcgaaccccggtacctccactttgtgtgagtga 8312560  T
Q  308 g-ttacgatggctttgccatctcttctatttacc 340  Q
    | ||| | ||||||||||||||||| ||| ||||    
T  8312559 gtttatggtggctttgccatctcttttatctacc 8312526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 333
Target Start/End: Complemental strand, 8793303 - 8793180
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-t 309  Q
    |||||| |||||||||||||| |||||||| | ||||||||| | || || |||||| ||||||||||| | |  ||||||||||||  ||||||||| |    
T  8793303 tcataaatcctagctcaactggcaaaaatatcaaaattgttaagccgtacgtcatgaccggggttcgaaccccggtacctccactttgtgtgtgtgagtt 8793204  T
Q  310 tacgatggctttgccatctcttct 333  Q
    || |||| |||| |||||||||||    
T  8793203 tatgatgactttaccatctcttct 8793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 32947617 - 32947719
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    ||||||||||||||||||||||||||||||||    ||||||||||| ||||| || ||| ||| ||||||| | | | | |||||||||| ||||||||    
T  32947617 gtctcataagtcctagctcaactgacaaaaatgttaaaattgttaggccgaacgtcttgaccggagttcgaaccccgacatctccactttatgtgtgtga 32947716  T
Q  308 gtt 310  Q
    |||    
T  32947717 gtt 32947719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 236567 - 236663
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtg 304  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||| || || |||||| ||||||||||| | |  ||||| ||||||| |||||    
T  236567 gtctcatcagtcctacctcaactgacaaaaatgtcgaaattgttaggccggacgtcatgaccggggttcgaaccccggtaccttcactttatgtgtg 236663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 4628097 - 4628049
Alignment:
Q  206 tagtctcataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  4628097 tagtctcataagtcctagctcaactgacaaaaatgctgaaattgttagg 4628049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 340
Target Start/End: Complemental strand, 17540207 - 17540075
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||||||||||||||   |||||| |||||||||||||| |  || |||||| ||||||||||| | | ||||||| |||||  ||| ||||    
T  17540207 gtctcataagtcctagctcaactagtaaaaatgccgaaattgttaggccagacgtcatgaccggggttcgaaccccgatacctcaactttgtgtgcgtga 17540108  T
Q  308 gttacgatggctttgccatctcttctatttacc 340  Q
     ||| ||||||   |||||||| ||||| ||||    
T  17540107 tttatgatggcaaagccatctcgtctatctacc 17540075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 41651074 - 41651172
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||||||||||||||||  |||| | ||||||||||||||| | || |||||||||||||||||| | |  ||||| || |||| |||||||||||    
T  41651074 tcataagtcctagctcaactggtaaaa-tgccgaaattgttaggttggacgtcatgatcggggttcgaatcccggtaccttcattttatgtgtgtgagtt 41651172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 270445 - 270322
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  |||||||||||   ||||||||| |||      
T  270445 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccactt---gtgtgtgagtttata 270349  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  270348 atggctttgccatttcgtctatctacc 270322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 15104049 - 15104159
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||||| ||||| || ||||||||||| || |  |||||||||||||||||| | | ||||||| || ||| ||||||||| |||      
T  15104049 aagtcctagctcaactgac-aaaatgccaaaattgttaggccggatgtcatgatcggggttcgaaccccgatacctctac-ttatgtgtgtgagtttata 15104146  T
Q  314 atggctttgccat 326  Q
    |||||||||||||    
T  15104147 atggctttgccat 15104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 335
Target Start/End: Complemental strand, 37186947 - 37186820
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctc-catacctccactttacgtgtgtga 307  Q
    |||||||||| ||||||||||||  |||||| |||||||||||| | || || |||||| | ||||||||| |||   ||||||||||||  |||| |||    
T  37186947 tctcataagttctagctcaactggtaaaaatgccgaaattgttaagccggacgtcatgaccagggttcgaa-ctctggtacctccactttgtgtgtttga 37186849  T
Q  308 g-ttacgatggctttgccatctcttctat 335  Q
    | ||| |||||||||| ||||||||||||    
T  37186848 gtttatgatggctttgtcatctcttctat 37186820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 10430463 - 10430424
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  10430463 aagtcctagctcaactgacaaaaatgccgaaattgttagg 10430424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 3628652 - 3628698
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  3628652 gtctcataagtcctaactcaactgataaaaatgccgaaattgttagg 3628698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 27227119 - 27227213
Alignment:
Q  247 ttgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttgccatctcttctatttacc 340  Q
    |||||||||||||  |||||||||||||||||| | |  || |||||||||| |||| |||| ||| |||| |||||||||||| ||||| ||||    
T  27227119 ttgttaggtcgaaagtcatgatcggggttcgaacccctgtaactccactttatgtgtatgagtttaggatgactttgccatctcgtctatctacc 27227213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 37315177 - 37315083
Alignment:
Q  216 agtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    ||||||||||| | |||||||||| ||||||||||||||  | || |||||||| | ||||||| |||   |||||||||||  |||||||||||    
T  37315177 agtcctagctcgaatgacaaaaatgccgaaattgttaggctggacgtcatgatccgagttcgaacctcggaacctccactttgtgtgtgtgagtt 37315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 39606409 - 39606534
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||||| |||| ||||||||| || |   ||||| ||||||||||| | | |||||||||| ||  ||||||||| |||      
T  39606409 aagtcctagctcaactggcaaaaatgccgatattgttaggccggatgccatgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttata 39606507  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  39606508 atggctttgccatttcgtctatctacc 39606534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 45611588 - 45611546
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  45611588 cataagttctagctcaactgacaaaaatgccgaaattgttagg 45611546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 42631108 - 42631028
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |   ||||||||||||||||| | | ||||||||||||    
T  42631108 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgccatgatcggggttcgaaccccgatacctccactt 42631028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 335
Target Start/End: Complemental strand, 11081092 - 11080964
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||| || |||||||| |||||||   ||||||| |||| || || | |||| |||||||| || | | |||||||||||||| |||| |||    
T  11081092 gtctcataagtcttaactcaactggcaaaaatgttgaaattgctaggccggacgttatgaccggggttcaaaccccgatacctccactttatgtgtatga 11080993  T
Q  308 gt-tacgatggctttgccatctcttctat 335  Q
    || || ||||| |||| |||||| |||||    
T  11080992 gtatatgatggttttgtcatctcgtctat 11080964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 16689091 - 16689154
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| || ||||||| |||||||| || || |||||||||||||||    
T  16689091 aagtcctagctcaactggcaaaa-tatcgaaatttttaggtcggacgtcttgatcggggttcgaa 16689154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 35068907 - 35068999
Alignment:
Q  244 aaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttgccatctcttctat 335  Q
    ||||||||||| || || ||||||||| ||||||||   | |||||||||||||  ||||||||| ||| || |||||||||||||| |||||    
T  35068907 aaattgttaggccggacgtcatgatcgaggttcgaattccaatacctccactttgtgtgtgtgagtttatgacggctttgccatctcgtctat 35068999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 43086597 - 43086514
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||||| | ||||| |||||||||||||| || |   ||||||||||||||||| | |  |||||||||||    
T  43086597 cataagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccactt 43086514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 45751157 - 45751111
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggt 255  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  45751157 gtctcataagtcctaactcaactg-caaaaatgccgaaattgttaggt 45751111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 335
Target Start/End: Original strand, 12176527 - 12176621
Alignment:
Q  242 cgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtg-agttacgatggctttgccatctcttctat 335  Q
    |||||||| ||| ||| || ||||||| ||||||| || | |  ||||||||||||| ||||||| | ||| ||||||||||||||||| |||||    
T  12176527 cgaaattgatagatcggacgtcatgattggggttcaaatcccggtacctccactttatgtgtgtgaaattatgatggctttgccatctcatctat 12176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 15331189 - 15331144
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcg 257  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||    
T  15331189 tcataagtcctagctcaactg-gaaaaatgccgaaattgttaggtcg 15331144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 5598306 - 5598386
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||  |||||| ||||||||||||||||| |  |||||| ||| ||||||| | |  |||||||||||    
T  5598306 aagtcctagctcaactgg-aaaaatgccgaaattgttaggtcggatgtcatgaccggagttcgaaccccggtacctccactt 5598386  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 5790063 - 5790143
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||| ||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | | ||||||||||||    
T  5790063 aagtcctagcttaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaatcccgatacctccactt 5790143  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 26261416 - 26261336
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||  |||||| |||||||||||||| || |   ||||||||||||||||| | |  |||||||||||    
T  26261416 aagtcctagctcaactgg-aaaaatgccgaaattgttaggccggataccatgatcggggttcgaatcccggtacctccactt 26261336  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 34271147 - 34271082
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcg 277  Q
    ||||||| |||||||||||   ||||||  ||||||||||||| ||||| || |||||||||||||    
T  34271147 cataagtactagctcaactagtaaaaatgacgaaattgttaggccgaacgtcgtgatcggggttcg 34271082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 45788647 - 45788708
Alignment:
Q  235 aaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||||||| | ||||   ||||||||||||||||| | | ||||||||||||    
T  45788647 aaaataccgaaattgttaagccgaatgccatgatcggggttcgaaccccgatacctccactt 45788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 48314172 - 48314252
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  48314172 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccactt 48314252  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 49500866 - 49500946
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  ||||||||| |||||||| | |  |||||||||||    
T  49500866 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcgaggttcgaaccccggtacctccactt 49500946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 8050483 - 8050547
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttc 276  Q
    |||||||| ||||||||| |||||||||  ||||||||||||| ||||  | |||| ||||||||    
T  8050483 cataagtcttagctcaaccgacaaaaatgtcgaaattgttaggccgaatgttatgaccggggttc 8050547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 11403174 - 11403237
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||||||  |||| | ||||||||||||||||| |   |||||||||||||||||    
T  11403174 aagtcctagctcaactgggaaaa-tgccgaaattgttaggtcggatgccatgatcggggttcgaa 11403237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 13980403 - 13980336
Alignment:
Q  242 cgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||||||||||| |  |||||||||||||||||| | |  ||||||||| ||| |||||||||||    
T  13980403 cgaaattgttaggtcggatatcatgatcggggttcgaatcccggtacctccac-ttatgtgtgtgagtt 13980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 15952955 - 15952892
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||| |  | ||||||||||||||||    
T  15952955 aagtcgtagctcaactggcaaaa-tgccgaaattgttaggtcggatgttatgatcggggttcgaa 15952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 18475114 - 18475177
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| | |||||||||| ||||||||| || |   |||||||||||||||||    
T  18475114 aagtcctagctcaactggc-aaaataccgacattgttaggccggatgccatgatcggggttcgaa 18475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 335
Target Start/End: Complemental strand, 19596783 - 19596659
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||| || ||||| || ||||||| | ||||||||||||| |||  ||||||| ||||||| || | |  ||| ||||||||   ||||| || ||    
T  19596783 cataagtcttaactcaaatggcaaaaatgctgaaattgttaggttgaaggtcatgattggggttcaaatccctgtacgtccactttgtatgtgttagttt 19596684  T
Q  311 acgatggctttgccatctcttctat 335  Q
    |||||| |||||||||||| |||||    
T  19596683 acgatgactttgccatctcgtctat 19596659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 24119661 - 24119724
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| |||||||||||    
T  24119661 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaa 24119724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 26763456 - 26763404
Alignment:
Q  227 aactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||| ||||||| ||||||||||||||||| || ||| || |||||||||||    
T  26763456 aactggcaaaaatgccgaaattgttaggtcggacgtcacgaccggggttcgaa 26763404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 40685534 - 40685597
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| |  |||||||||||||||| |  |||||| |||||||||||    
T  40685534 aagtcctagctcaactggcaaaa-tgtcgaaattgttaggtcggatgtcatgaccggggttcgaa 40685597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 43841904 - 43841860
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttaggtcg 257  Q
    |||||||||| ||||||||| ||||||  ||||||||||||||||    
T  43841904 ataagtcctaactcaactgataaaaatgtcgaaattgttaggtcg 43841860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 49632556 - 49632640
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||| |||||||  |||||| ||||||||||||||  | |  |||||| || |||||||| | | ||||||||||||    
T  49632556 cataagtcctagttcaactggtaaaaatgccgaaattgttaggctggatgtcatgaccgaggttcgaaccccgatacctccactt 49632640  T

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Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 333
Target Start/End: Original strand, 26526510 - 26526636
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtg 306  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||| |||||| || |||||||| ||||  ||||||||||||| |||||||    
T  26526510 gtctcataagtcttagctcaactggcaaaaataccgaaattgttaggccgaacgtcatgaccgaggttcgaa-ctccggtacctccactttatgtgtgtg 26526608  T
Q  307 ag-ttacgatggctttgccatctcttct 333  Q
    || ||| ||||  |||||||||||||||    
T  26526609 agtttatgatgaatttgccatctcttct 26526636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 22792234 - 22792108
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| || || |||  |||||||||| | | | |||||||||||  ||||||||| ||| |    
T  22792234 aagtcctagctcaactggcaaaaatgccgaaattgttaggtcggacgtcttgacaggggttcgaaccccgacacctccactttgtgtgtgtgagtttatg 22792135  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    |||  |||||||| |||||||| ||||    
T  22792134 atgattttgccatttcttctatgtacc 22792108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 340
Target Start/End: Original strand, 30527983 - 30528112
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||||| |   ||||| |||||||||||||| || || ||||||||| | |||||| | |   |||||||||||  ||||||||| ||    
T  30527983 cataagtcctagctcaaccggtgaaaatgccgaaattgttaggccggacatcatgatcgagattcgaaccccggcacctccactttgtgtgtgtgagttt 30528082  T
Q  311 acgatggctttgccatctcttctatttacc 340  Q
    ||||||||||| |||| |||||||| ||||    
T  30528083 acgatggctttaccatttcttctatctacc 30528112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 340
Target Start/End: Original strand, 30568323 - 30568452
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||||| |   ||||| |||||||||||||| || || ||||||||| | |||||| | |   |||||||||||  ||||||||| ||    
T  30568323 cataagtcctagctcaaccggtgaaaatgccgaaattgttaggccggacatcatgatcgagattcgaaccccggcacctccactttgtgtgtgtgagttt 30568422  T
Q  311 acgatggctttgccatctcttctatttacc 340  Q
    ||||||||||| |||| |||||||| ||||    
T  30568423 acgatggctttaccatttcttctatctacc 30568452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 6053174 - 6053094
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |  |||||| ||||||||||| | |  |||||||||||    
T  6053174 aagtcctagctcaactgacaaaa-tgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt 6053094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 8595619 - 8595559
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatga 267  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||| || || ||||||    
T  8595619 agtcccataagtcctagctcaactggcaaaaatgccgaaattgttaggccggacgtcatga 8595559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 11408374 - 11408498
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||||||  |||||||  | |||||||||| |||||| |||| ||||| ||||||| | |  ||||| ||||||  ||||||||| ||    
T  11408374 cataagtcctagctcaactagcaaaaatgtcaaaattgttagatcgaacgtcataatcggagttcgaatcccagtaccttcactttgtgtgtgtgagttt 11408473  T
Q  311 acgatggctttgccatctcttctat 335  Q
    | ||||| |||||| |||| |||||    
T  11408474 atgatggttttgccttctcgtctat 11408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 671182 - 671104
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccac 294  Q
    ||||||||| ||||||| ||||| | ||||||||||||||||| |  |||||||||||||||||| | | ||||||||||    
T  671182 aagtcctagttcaactggcaaaa-tgccgaaattgttaggtcggatgtcatgatcggggttcgaaccccgatacctccac 671104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 11462739 - 11462830
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtg 304  Q
    ||||||||||||||||||| |||||||| ||||||||||  |  |||| ||||||  |||||||||| | | |||||| ||||||| |||||    
T  11462739 ataagtcctagctcaactggcaaaaatatcgaaattgtttagcagaacgtcatgactggggttcgaaccccgataccttcactttatgtgtg 11462830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 29401764 - 29401835
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||| ||| |||||| || ||||||| ||||||||||||||| ||| |||||||| | |||||||    
T  29401764 gtctcataagttctaactcaacggataaaaatatcgaaattgttaggtcaaacgtcatgatcagagttcgaa 29401835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 23074768 - 23074643
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  23074768 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 23074670  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  23074669 atggctttgccatttcgtctatctacc 23074643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 41215362 - 41215276
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccacttta 298  Q
    |||||||||||||||||| |  |||||| | ||||||||||  ||| || |||||||||||||| ||| | | ||||||||||||||    
T  41215362 cataagtcctagctcaacaggtaaaaatgctgaaattgttaaatcggacgtcatgatcggggtttgaaccccgatacctccacttta 41215276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 1833443 - 1833362
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | | ||||||||||||    
T  1833443 aagtcatagctcaactggcaaaaatgccgaaattgttaggccggataccatgaccggggttcgaaccccgatacctccactt 1833362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 9054094 - 9054014
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| |||||||||||||||| || |   ||||| ||||||||||| | | ||||||||||||    
T  9054094 aagtcctagctcaactggcaaaa-taccgaaattgttaggccggatgccatgaccggggttcgaaccccgatacctccactt 9054014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 34543229 - 34543160
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcg 277  Q
    ||||||||||||||||||||||  |||||||||  |||||| |||||| | || |||| |||||||||||    
T  34543229 gtctcataagtcctagctcaaccaacaaaaatattgaaattattaggttggacgtcatcatcggggttcg 34543160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 40318909 - 40318828
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | | ||||||||||||    
T  40318909 aagtcatagctcaactggcaaaaatgccgaaattgttaggccggataccatgaccggggttcgaaccccgatacctccactt 40318828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 340
Target Start/End: Original strand, 9599311 - 9599442
Alignment:
Q  210 ctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctc-catacctccactttacgtgtgtgag 308  Q
    ||||||| ||||||||||||||||||||||  |||||||||||   |  || || |||||||||||| || |||   ||||||||||||  |||||||||    
T  9599311 ctcataattcctagctcaactgacaaaaatgtcgaaattgttaaaccagacgtcttgatcggggttc-aaactctggtacctccactttgtgtgtgtgag 9599409  T
Q  309 -ttacgatggctttgccatctcttctatttacc 340  Q
     ||| |||| ||||||||| |||||||| ||||    
T  9599410 cttatgatgactttgccatttcttctatgtacc 9599442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 12168253 - 12168344
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtg 304  Q
    ||||||||||| ||||||||||||| || |||||| ||||||| || || |||||||||| ||||||| | |  ||||| ||||||| |||||    
T  12168253 cataagtcctacctcaactgacaaatatgccgaaa-tgttaggccggacatcatgatcggcgttcgaaccccggtaccttcactttatgtgtg 12168344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 12262875 - 12262939
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||| ||||| | ||||||| ||||||||||||||||| |  | ||||||||||||||||    
T  12262875 aagtcctagttcaaccggcaaaaatgccgaaattgttaggtcggatattatgatcggggttcgaa 12262939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 12878241 - 12878119
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||||||  ||||||| | | ||||||||||||   ||||||||| |||      
T  12878241 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcgaagttcgaaccccgatacctccactt---gtgtgtgagtttata 12878146  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  12878145 atggctttgccatttcgtctatctacc 12878119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 21728665 - 21728729
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |   ||||| |||||||||||    
T  21728665 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaa 21728729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 6525892 - 6525963
Alignment:
Q  264 atgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttgccatctcttcta 334  Q
    |||||||||||||||| | | |||||||||||||  ||||||||| ||| |||| ||||| |||||||||||    
T  6525892 atgatcggggttcgaaccccaatacctccactttgtgtgtgtgagtttatgatgactttgtcatctcttcta 6525963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 340
Target Start/End: Original strand, 34856592 - 34856710
Alignment:
Q  222 agctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctt 320  Q
    |||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  ||||||||| ||| ||||||||| |||  |||||||    
T  34856592 agctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctt 34856690  T
Q  321 tgccatctcttctatttacc 340  Q
    |||||| || ||||| ||||    
T  34856691 tgccatttcgtctatctacc 34856710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 972718 - 972676
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcg 257  Q
    ||||||||| |||||||||||||||  ||||||||||||||||    
T  972718 aagtcctagttcaactgacaaaaatgtcgaaattgttaggtcg 972676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 4164964 - 4165088
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  4164964 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 4165061  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  4165062 atggctttgccatttcgtctatctacc 4165088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 13538313 - 13538271
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||    
T  13538313 cataagtcctaactcaacttacaaaaatatcgaaattgttagg 13538271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 23311296 - 23311172
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   ||||| ||||||||||| | |  ||||||||| ||| ||||||||| |||      
T  23311296 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttata 23311199  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  23311198 atggctttgccatttcgtctatctacc 23311172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 24443990 - 24443949
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcg 257  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  24443990 aagtcctagctcaactggcaaaa-taccgaaattgttaggtcg 24443949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 1612377 - 1612458
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||| |||||||||||||||||   |||||||||||| || || |||| | || |||||||| | | ||||||||||||    
T  1612377 aagtccttgctcaactgacaaaaatgttgaaattgttaggccggacatcataaccgcggttcgaaccccgatacctccactt 1612458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 37940923 - 37941003
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| |  ||||||||||||| || |   ||||||||||||||||| | | ||||||||||||    
T  37940923 aagtcctagctcaactggcaaaa-tgtcgaaattgttaggccggatgccatgatcggggttcgaaccccgatacctccactt 37941003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 41408631 - 41408712
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||||| |||||||||||||| || |   ||| | ||||||||||| | | ||||||||||||    
T  41408631 aagtcatagctcaactggcaaaaatgccgaaattgttaggccggataccataaccggggttcgaaccccgatacctccactt 41408712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 2025804 - 2025741
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||| ||||||||| |||| | | ||||||||||||||| |  ||||||||||||||||||    
T  2025804 aagtcctaactcaactgataaaa-tgcggaaattgttaggtcggatgtcatgatcggggttcgaa 2025741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 25567809 - 25567725
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||| ||||||| ||||||| | |||||| ||||| || |   ||||||||||||||||| | |  |||||||||||    
T  25567809 cataagtcctagttcaactggcaaaaatgctgaaattattaggccggatgccatgatcggggttcgaaccccgttacctccactt 25567725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 29069633 - 29069672
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggt 255  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  29069633 aagtcctagctcaactggcaaaa-taccgaaattgttaggt 29069672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 10661985 - 10662082
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||| | || ||||| |||||||||||| | | ||||||||||||||||||||||||||    
T  10661985 cataagtcatagttcaactgacaaaaatgccgaaattgttaggttggacgtcatggtcggggttcgaa-cccgatacctccactttacgtgtgtgagtt 10662082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 47665341 - 47665239
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcca-tacctccactttacgtgtgtg 306  Q
    ||||||||| ||||| |||||| |||||||||  ||||||||||||| || || || ||||||||||| ||| ||||| ||||||||||||| |||||||    
T  47665341 gtctcataactcctaactcaaccgacaaaaatgtcgaaattgttaggccggacatcttgatcggggtttgaa-ctccaatacctccactttatgtgtgtg 47665243  T
Q  307 agtt 310  Q
    ||||    
T  47665242 agtt 47665239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 33095979 - 33096077
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactttacgtgtgtgagtt 310  Q
    ||||||||||| |||||||| |||||||  ||||||||||||| ||||| ||||||| ||||||| || |||| | |||||||||||  |||||||||||    
T  33095979 cataagtcctaactcaactggcaaaaatgacgaaattgttaggccgaacgtcatgattggggttc-aaactccgacacctccactttgtgtgtgtgagtt 33096077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 54923483 - 54923554
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||| ||||||||  ||||||  |||||||||||||||| || |||||| |||||||||||    
T  54923483 gtctcataagtcctaactcaactggtaaaaatgtcgaaattgttaggtcggacgtcatgaccggggttcgaa 54923554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 4659535 - 4659637
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    |||||||||||| ||||||||||||||||||| | ||||||  |||| || |  || ||||||| ||||||| |   |||||||||||||| ||||||||    
T  4659535 gtctcataagtcatagctcaactgacaaaaatgctgaaattaataggccggatgtcttgatcggtgttcgaaccctgatacctccactttatgtgtgtga 4659634  T
Q  308 gtt 310  Q
    |||    
T  4659635 gtt 4659637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 10511222 - 10511319
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtga 307  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||| | || |  || || ||||||||| | | ||||||||||||| |||||||||    
T  10511222 tctcataagtcctagttcaactgacaaaaatgccgaaatcgttaggttgtacgttgtggtcagggttcgaa-cccgatacctccactttgcgtgtgtga 10511319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 10514549 - 10514646
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| || |  ||||| ||||||||| || | | |||||| |||||| ||||||||||||    
T  10514549 cataagtcctagttcaacagacaaaaatgccgaaattgttaggccggatgtcatggtcggggttcaaatc-cgatacctacactttgcgtgtgtgagtt 10514646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 335
Target Start/End: Complemental strand, 7131620 - 7131506
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt- 310  Q
    |||||||| ||||| |||||||||||||||| |||||||||||           || |||||||||||  || |||||||||||||  |||||||||||     
T  7131620 cataagtcttagcttaactgacaaaaataccaaaattgttaggc----------gaccggggttcgaacttcgatacctccactttgtgtgtgtgagttt 7131531  T
Q  311 acgatggctttgccatctcttctat 335  Q
    | |||||||||||||||||||||||    
T  7131530 atgatggctttgccatctcttctat 7131506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 1562809 - 1562920
Alignment:
Q  225 tcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttgc 323  Q
    ||||||| ||||||| ||||||||||||||||| |  |||||||||||||||||| | |  ||||| |||||   ||||||||| |||  ||||||||||    
T  1562809 tcaactggcaaaaatgccgaaattgttaggtcggatgtcatgatcggggttcgaaccccggtaccttcactt---gtgtgtgagtttataatggctttgc 1562905  T
Q  324 catctcttctattta 338  Q
    ||| || ||||||||    
T  1562906 catttcgtctattta 1562920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 7251668 - 7251624
Alignment:
Q  210 ctcataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  7251668 ctcataagtcctaactcaactgacaaaaatgccgaaattgttagg 7251624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 27157926 - 27158050
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    ||||||| |||  ||||| ||||||||| ||||||||||| ||  | || | |||||||||||||||| ||| ||||||| | |||| |||| |||| ||    
T  27157926 cataagttctaattcaaccgacaaaaatgccgaaattgtttggcaggacgttatgatcggggttcgaacctcaatacctctattttatgtgtatgagttt 27158025  T
Q  311 acgatggctttgccatctcttctat 335  Q
    | ||||| ||||||||||| |||||    
T  27158026 atgatggttttgccatctcatctat 27158050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 40878282 - 40878218
Alignment:
Q  240 accgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtg 304  Q
    ||||||||||||||||||||| ||||||| | |||||||| | | |||||||||||||| |||||    
T  40878282 accgaaattgttaggtcgaacgtcatgattgaggttcgaaccccgatacctccactttatgtgtg 40878218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 51053642 - 51053686
Alignment:
Q  235 aaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  51053642 aaaatgccgaaattgttaggtcgaacgtcatgatcggggttcgaa 51053686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 8526223 - 8526152
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||| || |||||||  |||||||| | |||||||||||||  || ||||||||||||||||||    
T  8526223 gtctcataagtcttaactcaacttgcaaaaataacaaaattgttaggtcagacgtcatgatcggggttcgaa 8526152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 2558754 - 2558862
Alignment:
Q  217 gtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgat 315  Q
    ||||||||||||||| ||||| | | ||||||||||||||| |  |||||||||||||| ||| | | |||||||||| ||| ||||||||| |||  ||    
T  2558754 gtcctagctcaactggcaaaa-tgctgaaattgttaggtcggatgtcatgatcggggtttgaaccccgatacctccac-ttatgtgtgtgagtttataat 2558851  T
Q  316 ggctttgccat 326  Q
    |||||||||||    
T  2558852 ggctttgccat 2558862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 11751213 - 11751255
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttagg 254  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  11751213 cataagtcctagctcaactggcaaaaatgccgaaattgttagg 11751255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 40840173 - 40840254
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  |||||||||||    
T  40840173 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccactt 40840254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 42156980 - 42157033
Alignment:
Q  207 agtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaac 260  Q
    |||||||||||| |||| |||||||| |||| |||||||||||||||| |||||    
T  42156980 agtctcataagttctagttcaactgataaaagtaccgaaattgttaggccgaac 42157033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 328
Target Start/End: Original strand, 21129055 - 21129164
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||||||| |||||||||||        |||||| || |||||||||||||||||| | |  |||||| |||||  || |||||| ||    
T  21129055 cataagtcctagctcaactggcaaaaataccg--------aggtcggacgtcatgatcggggttcgaaccccggtacctctactttgtgtttgtgagttt 21129146  T
Q  311 acgatggctttgccatct 328  Q
    | ||||||||||||||||    
T  21129147 atgatggctttgccatct 21129164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 24751758 - 24751821
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  ||||||||||||||||||    
T  24751758 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgatcggggttcgaa 24751821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 28171103 - 28171039
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |   ||||| |||||||||||    
T  28171103 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaa 28171039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 39948528 - 39948584
Alignment:
Q  213 ataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatc 269  Q
    |||||||||||||||||||  ||||||| |||||||||||||  |||| ||||||||    
T  39948528 ataagtcctagctcaactggtaaaaatatcgaaattgttaggcagaacatcatgatc 39948584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 37278658 - 37278599
Alignment:
Q  217 gtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttc 276  Q
    |||||||||||||||||||||||  |||||||||||| | |||  | |||||||||||||    
T  37278658 gtcctagctcaactgacaaaaatgtcgaaattgttagattgaatattatgatcggggttc 37278599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 41464669 - 41464795
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt-tacgtgtgtgag-ttac 312  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |   ||||| ||||||||||| | |  ||||||||||| |  ||||||||| |||     
T  41464669 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgccatgaccggggttcgaaccccagtacctccacttgtgtgtgtgtgagtttat 41464767  T
Q  313 gatggctttgccatctcttctatttacc 340  Q
     ||||||||||||| || ||||| ||||    
T  41464768 aatggctttgccatttcgtctatctacc 41464795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 3917771 - 3917895
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  3917771 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 3917868  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  3917869 atggctttgccatttcgtctatctacc 3917895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 24910411 - 24910287
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||||||||||||||| ||||| | ||||||||||||||  | |  |||||||||||||||||| | |  ||||||||| ||  ||||||||| |||      
T  24910411 aagtcctagctcaactggcaaaa-tgccgaaattgttaggctggatatcatgatcggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttata 24910314  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  24910313 atggctttgccatttcgtctatctacc 24910287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 340
Target Start/End: Complemental strand, 29212191 - 29212062
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt-tacgtgtgtgag-t 309  Q
    |||||||||||||||||||| | ||||| |||||||||||||| || |   ||||| ||||||||||| | |  ||||||||||| |  ||||||||| |    
T  29212191 cataagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgtgagtt 29212093  T
Q  310 tacgatggctttgccatctcttctatttacc 340  Q
    ||  ||||||||||||| || ||||| ||||    
T  29212092 tataatggctttgccatttcgtctatctacc 29212062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 40559679 - 40559759
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcc-atacctccactt 296  Q
    ||||||||||||||||||  ||||| ||||||||||||||||| |   | ||||||||||||||| |||| ||||||||||||    
T  40559679 aagtcctagctcaactga-taaaatgccgaaattgttaggtcggatgccttgatcggggttcgaa-ctccgatacctccactt 40559759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 48191099 - 48191179
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctcca-tacctccactt 296  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |  |||||| ||||||||||| ||||| |||||||||||    
T  48191099 aagtcctagctcaactg-ctaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaa-ctccagtacctccactt 48191179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 2687564 - 2687644
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   ||||||||||||||||| |   ||||||||||||    
T  2687564 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatggcatgatcggggttcgaaccctgatacctccactt 2687644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 30703095 - 30703176
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    |||||||||||||| || |||||||| |||||||||||||  | |  |||||| ||||||||||| | |  |||||||||||    
T  30703095 aagtcctagctcaattggcaaaaatatcgaaattgttaggctggatgtcatgaccggggttcgaaccccgttacctccactt 30703176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 33746103 - 33746058
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcg 257  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||    
T  33746103 cataagtcctaactcagctgacacaaatgccgaaattgttaggtcg 33746058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 47069011 - 47069092
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| ||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  |||||||||||    
T  47069011 aagtcttagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccactt 47069092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 2861052 - 2861108
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatga 267  Q
    |||||||||||| ||||||| || |||||  |||||||||||||||| || ||||||    
T  2861052 tcataagtcctaactcaactaacgaaaatgtcgaaattgttaggtcggacgtcatga 2861108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 340
Target Start/End: Original strand, 3440736 - 3440855
Alignment:
Q  221 tagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggct 319  Q
    ||||||||||| ||||||| |||||||||||||| || |   ||||| ||||||||||| | |  ||||||||| ||  ||||||||| |||  ||||||    
T  3440736 tagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggct 3440834  T
Q  320 ttgccatctcttctatttacc 340  Q
    ||||||| || ||||| ||||    
T  3440835 ttgccatttcgtctatctacc 3440855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 6583358 - 6583295
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   |||||||||||||||||    
T  6583358 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaa 6583295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 340
Target Start/End: Complemental strand, 10474043 - 10473913
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag 308  Q
    ||||||||||||||||||||||| | ||||| | |||||||||||| || |   ||||| ||||||||||| | |  ||||||||| ||  |||||||||    
T  10474043 tctcataagtcctagctcaactggc-aaaatgctgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgag 10473946  T
Q  309 -ttacgatggctttgccatctcttctatttacc 340  Q
     |||  ||||||||||||| || ||||| ||||    
T  10473945 tttataatggctttgccatttcatctatctacc 10473913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 27396859 - 27396922
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||||| ||||| |||||||||||||| || |   ||||| |||||||||||    
T  27396859 aagtcctagctcaactgac-aaaatgccgaaattgttaggccggatgccatgaccggggttcgaa 27396922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 28731852 - 28731915
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||| |||||||||||||||||| |  |||||||||||||||| |   |||||||||||||||||    
T  28731852 aagttctagctcaactgacaaaa-tgtcgaaattgttaggtcggatgccatgatcggggttcgaa 28731915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 44037567 - 44037504
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  || |||||| ||||||||    
T  44037567 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgtcgtgatcgaggttcgaa 44037504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 46008868 - 46008959
Alignment:
Q  244 aaattgttaggtcgaacttcatgatcggggttcgaagctc-catacctccactttacgtgtgtgag-ttacgatggctttgccatctcttcta 334  Q
    ||||||||||| || || |||||||||| ||||||| |||  |||||||||||||  |||| |||| ||||||||| ||||| ||||||||||    
T  46008868 aaattgttaggccggacgtcatgatcggagttcgaa-ctcagatacctccactttgtgtgtatgagtttacgatggttttgcgatctcttcta 46008959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 47410875 - 47410812
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| |  |||||||||||||||| |  |||||| |||||||||||    
T  47410875 aagtcctagctcaactggcaaaa-tgtcgaaattgttaggtcggatgtcatgaccggggttcgaa 47410812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 3922 - 3824
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgagtt 310  Q
    |||||||||||||||||||||  |||| | ||||||||||||||| | || |||||||||||||||||| | |  ||||| || |||| |||||||||||    
T  3922 tcataagtcctagctcaactggtaaaa-tgccgaaattgttaggttggacgtcatgatcggggttcgaatcccggtaccttcattttatgtgtgtgagtt 3824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 1266866 - 1266744
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    |||||||| |||||| |  |||||| |||||||||||||| || || |||||||||||||||| | |||  |||||||| |||  ||||||||| ||| |    
T  1266866 aagtcctaactcaaccggtaaaaatgccgaaattgttaggccggacgtcatgatcggggttcggacctcagtacctccattttgtgtgtgtgagtttatg 1266767  T
Q  314 atggctttgccatctcttctatt 336  Q
    || | ||||||||||| ||||||    
T  1266766 atagttttgccatctcatctatt 1266744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 2747551 - 2747662
Alignment:
Q  212 cataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-tt 310  Q
    |||||||||||||||  |||||||||||  | ||||||||||| | ||| ||||||||||| |||||| |   |||| |||| |||| ||||||||| ||    
T  2747551 cataagtcctagctcgcctgacaaaaatgtcaaaattgttaggccaaacgtcatgatcgggattcgaatcctgatacttccattttatgtgtgtgagttt 2747650  T
Q  311 acgatggctttg 322  Q
    |||||| |||||    
T  2747651 acgatgactttg 2747662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 7974831 - 7974774
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcgggg 273  Q
    |||||||| |||||||||||||| | ||||||||||||||||| || ||||||||||||    
T  7974831 aagtcctacctcaactgacaaaa-tgccgaaattgttaggtcggacatcatgatcgggg 7974774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 8939631 - 8939711
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  |||||| ||||||||||| | |  |||||||||||    
T  8939631 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt 8939711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 340
Target Start/End: Original strand, 9297755 - 9297887
Alignment:
Q  209 tctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcgggg-ttcgaagctccatacctccactttacgtgtgtga 307  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||| |  || ||||||| |||| |||||| | |  ||||||||||||  ||||||||    
T  9297755 tctcacaagtcctagttcaactgacaaaaatgtcgaaattgttaggccagacgtcatgattggggtttcgaa-cccggtacctccactttgtgtgtgtga 9297853  T
Q  308 g-ttacgatggctttgccatctcttctatttacc 340  Q
    | ||| ||||| ||||||||| | ||||| ||||    
T  9297854 gtttatgatggttttgccatcccgtctatctacc 9297887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 9727499 - 9727580
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||| |||||||||||||||  ||||||||||||| || |   ||||||||||||||||| | |  |||||||||||    
T  9727499 aagtcctagttcaactgacaaaaatgtcgaaattgttaggccggataccatgatcggggttcgaacccctgtacctccactt 9727580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 8977159 - 8977223
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||| ||||||||||| ||||||| || ||||||||||| || |  ||||||||||||||||||    
T  8977159 aagtcttagctcaactggcaaaaatgcccaaattgttaggccggatgtcatgatcggggttcgaa 8977223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 10181050 - 10181113
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |  || |||||||||||||||    
T  10181050 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgtcgtgatcggggttcgaa 10181113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 16496776 - 16496712
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |   ||||| |||||||||||    
T  16496776 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaa 16496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 12795142 - 12795018
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    |||||||||||||||| |  ||||| |||||||||||||| || |  |||||| ||||||||||| | |  ||||||||| ||| ||||||||| |||      
T  12795142 aagtcctagctcaact-agtaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccgcggtacctccac-ttatgtgtgtgagtttata 12795045  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  12795044 atggctttgccatttcgtctatctacc 12795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 1241600 - 1241680
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  1241600 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccgctacctccactt 1241680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 2314722 - 2314642
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| ||||||||||| | |  |||||||||||    
T  2314722 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccactt 2314642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 4996877 - 4996957
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||||| ||||| | |||||||||||| || |   ||||||||||||||||| | |  |||||||||||    
T  4996877 aagtcctagctcaactgac-aaaatgctgaaattgttaggccggatgccatgatcggggttcgaatcccagtacctccactt 4996957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 23259615 - 23259578
Alignment:
Q  211 tcataagtcctagctcaactgacaaaaataccgaaatt 248  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  23259615 tcataagttctagctcaactgacaaaaatgccgaaatt 23259578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 31205306 - 31205226
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |   ||||||||||||||||| | |  |||||||||||    
T  31205306 aagtcctagctcaactggc-aaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccagtacctccactt 31205226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 735450 - 735572
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    |||| |||||||||||| ||||| | |||||||||||||| || |   ||||||||||||||||| | |  |||||||||||   ||||||||| |||      
T  735450 aagttctagctcaactggcaaaa-tgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccactt---gtgtgtgagtttata 735545  T
Q  314 atggctttgccatctcttctatttacc 340  Q
    ||||||||||||| || ||||| ||||    
T  735546 atggctttgccatttcgtctatctacc 735572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 2018886 - 2018822
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||||||  ||||||  ||||||||||||||| ||  |||||| || ||||||||    
T  2018886 aagtcctagctcaactggtaaaaatgtcgaaattgttaggtcaaatgtcatgaccgtggttcgaa 2018822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 4083592 - 4083655
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |   ||||| |||||||||||    
T  4083592 aagtcctagctcaactggcaaaa-tgccgaaattgttaggtcggatgccatgaccggggttcgaa 4083655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 4891013 - 4891123
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacg 313  Q
    ||||| |||||||||||  |||||| |||||||||||||| |  |  |||||| ||||||| ||| ||| |||||||||| ||| ||||||||| |||      
T  4891013 aagtcttagctcaactgg-aaaaatgccgaaattgttaggccagatgtcatgaccggggtttgaatctcgatacctccac-ttatgtgtgtgagtttata 4891110  T
Q  314 atggctttgccat 326  Q
    |||||||||||||    
T  4891111 atggctttgccat 4891123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 17534646 - 17534583
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| |||||||||||    
T  17534646 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaa 17534583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 32107958 - 32107895
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| | ||||| ||||||||||||||  | |  ||||||||||||||||||    
T  32107958 aagtcctagctcaactggc-aaaatgccgaaattgttaggctggatgtcatgatcggggttcgaa 32107895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1067
Description:

Target: scaffold1067; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 2994 - 2921
Alignment:
Q  206 tagtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||||||  |||||||||||||||||  |||||||| || ||||| |||||| |||| ||||||    
T  2994 tagtctcataagtcctaattcaactgacaaaaatactaaaattgtttggccgaacgtcatgaccgggattcgaa 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 19444 - 19359
Alignment:
Q  208 gtctcataagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctcca 293  Q
    |||||||||||||||| ||||||| |||||||   |||||||||||| || || ||||||| |||||||||| | | |||||||||    
T  19444 gtctcataagtcctagttcaactggcaaaaatgttgaaattgttaggccggacgtcatgattggggttcgaaccccgatacctcca 19359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 22133 - 22207
Alignment:
Q  262 tcatgatcggggttcgaagctccatacctccactttacgtgtgtgag-ttacgatggctttgccatctcttctat 335  Q
    |||||||||||||||||| | | |||||||||||||  ||||||||| ||| |||| ||||| |||||| |||||    
T  22133 tcatgatcggggttcgaaccccgatacctccactttgtgtgtgtgagtttatgatgactttgtcatctcgtctat 22207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 15063 - 15143
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| |||||||||||| |||| | |||||||||||||| ||||  |||||| || |||||||| |||  |||||||||||    
T  15063 aagtcttagctcaactgataaaa-tgccgaaattgttaggccgaatgtcatgaccgaggttcgaacctctgtacctccactt 15143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 23898 - 23978
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||| |||||||||||| |||| | |||||||||||||| ||||  |||||| || |||||||| |||  |||||||||||    
T  23898 aagtcttagctcaactgataaaa-tgccgaaattgttaggccgaatgtcatgaccgaggttcgaacctctgtacctccactt 23978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 90574 - 90654
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaagctccatacctccactt 296  Q
    ||||||||||||||||| | ||||| |||||||||||||| |  |  |||||||||||||||||| | |  |||||||||||    
T  90574 aagtcctagctcaactggc-aaaatgccgaaattgttaggcctgatgtcatgatcggggttcgaaccccggtacctccactt 90654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 6784 - 6847
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    ||||||||||||||||| ||||| | |||||||||||||| || |  |||||| |||||||||||    
T  6784 aagtcctagctcaactggcaaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaa 6847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 160452 - 160516
Alignment:
Q  215 aagtcctagctcaactgacaaaaataccgaaattgttaggtcgaacttcatgatcggggttcgaa 279  Q
    |||||||||||||||||  |||||| |||||||||||||| || |   ||||| |||||||||||    
T  160452 aagtcctagctcaactggtaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaa 160516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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