View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8650_low_20 (Length: 288)
Name: NF8650_low_20
Description: NF8650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8650_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 25380744 - 25381018
Alignment:
| Q |
1 |
ctcttcagttacttgtctgtgctcttcatggtcatatagaacatgatcagaagggtttattgttctttatctactccttgatgtggaataacattttact |
100 |
Q |
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| T |
25380744 |
ctcttcagttacttgtctgtgctcttcatggtcatatagtacatgatcagaagggtttattgttctttatctactccttgatgtggaataacattttact |
25380843 |
T |
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| Q |
101 |
gaatgaaatctataatcttctctctttagatcatcatatttttaagtcggtgattgcgaaactgccacaaatttctaccattaatgcaaatcaggaagcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
25380844 |
gaatgaaatctataatcttctctctttagatcatcatatttttaagtcggtgattgcgaaactgccacaaatttctaccactaatgcaaatcaggaagcc |
25380943 |
T |
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| Q |
201 |
actgaagacactactgaagacatgtcacctggaattaatgtatgcactcttagcttgttttgttttatattttga |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
25380944 |
actgaagacactactgaagacatgtcacctggaattaatgtatgcactcttggcttgttttgttttatattttga |
25381018 |
T |
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