View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8650_low_37 (Length: 237)
Name: NF8650_low_37
Description: NF8650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8650_low_37 |
 | |
|
| [»] scaffold0006 (6 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0460 (2 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0006 (Bit Score: 172; Significance: 1e-92; HSPs: 6)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 174883 - 175102
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
174883 |
tgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgttgtatctgt |
174982 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
174983 |
tgcggattgcaaaagcttgataagcctctttccactctcagtggctagagatatgatgcaacttcaaagtcttcttgtaagtaactgtgggattgaagaa |
175082 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
175083 |
attgttgtcaaggaagaagg |
175102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 190291 - 190510
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
190291 |
tgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgttgtatctgt |
190390 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
190391 |
tgcggattgcaaaagcttgataagcctctttccactctcagtggctagagatatgatgcaacttcaaagtcttcttgtaagtaactgtgggattgaagaa |
190490 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
190491 |
attgttgtcaaggaagaagg |
190510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 210615 - 210831
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
210615 |
tgaagaaattagaactattcaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
210714 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
210715 |
tgtgggatgcaatagcttgataagcctctttccattctcagtggctagagatatgatgcaacttcaaagtcttcatgtaagtaactgtgggattgaagaa |
210814 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
210815 |
attgttgcaaaggaaga |
210831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 113712 - 113929
Alignment:
| Q |
3 |
aagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgttg |
102 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
113712 |
aagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatccgttg |
113811 |
T |
|
| Q |
103 |
tggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaat |
202 |
Q |
| |
|
||| |||||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| | ||| ||| ||||||||| | ||||| |
|
|
| T |
113812 |
tgggatgcaatagcttgataagcctctttccactttcagtagctagagatttgatgcaacttcaaagtcttcaagtaattaaatgtgggattcaagaaat |
113911 |
T |
|
| Q |
203 |
tgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
113912 |
tgttgccaaggaagaagg |
113929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 118485 - 118590
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
|||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
118485 |
tgaaaaaattaaaactattcaatcttccaaaactgaaacatgtatggaaagaggatccacattacactatgaggtttgaaaatttaagtgatgtatctgt |
118584 |
T |
|
| Q |
101 |
tgtgga |
106 |
Q |
| |
|
|||||| |
|
|
| T |
118585 |
tgtgga |
118590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 142785 - 142838
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagagg |
54 |
Q |
| |
|
|||||||| || || |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
142785 |
tgaagaaactaaaaatatctaatcttccaaaactgaagcatgtatggaaagagg |
142838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 13677301 - 13677520
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13677301 |
tgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgttgtatctgt |
13677400 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
13677401 |
tgcggattgcaaaagcttgataagcctctttccactctcagtggctagagatatgatgcaacttcaaagtcttcttgtaagtaactgtgggattgaagaa |
13677500 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
13677501 |
attgttgtcaaggaagaagg |
13677520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 13596140 - 13596359
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
13596140 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgatgtatctgt |
13596239 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||| | |||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
13596240 |
tgtgggatgccatagcttgataagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtaactgtgggattgatgaa |
13596339 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
13596340 |
attgttgtcaaggaagaagg |
13596359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13552405 - 13552623
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
13552405 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgatgtatctgt |
13552504 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||| | ||||||||| | ||| |
|
|
| T |
13552505 |
tgtgggatgcaatagcttgataagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtcagtgtgggattcaagaa |
13552604 |
T |
|
| Q |
201 |
attgttgtcaaggaagaag |
219 |
Q |
| |
|
||||| | ||||||||||| |
|
|
| T |
13552605 |
attgtggccaaggaagaag |
13552623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20510994 - 20510778
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| || |
|
|
| T |
20510994 |
tgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatggggtttcaaaatttaagtgatgtatacgt |
20510895 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||| ||| ||||||||| | ||| |
|
|
| T |
20510894 |
tgtggtatgcaatagcttgataagcctctttccactttcagtagctagagatatgatgcaacttcaaagtcttcaagtaattaaatgtgggattcaagaa |
20510795 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
20510794 |
attgttgccaaggaaga |
20510778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 15896217 - 15895998
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15896217 |
tgaagaaattaaaactatctaatcttccaaaactgaaacatgtatggaaggaggacccacattacactatgaggtttcaaaatttaagctatgtatctgt |
15896118 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||| |||| |||| | ||| |
|
|
| T |
15896117 |
tgtggaatgtgaaagcttgataagcctctttccactctcagtgggtagagatatgatgcaacttcaaagtcttcgagtaagtaagtgtgagattcaagaa |
15896018 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| | |||| ||||| |
|
|
| T |
15896017 |
attgttgccgaggaggaagg |
15895998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13516929 - 13517145
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13516929 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgcggtttcaaaatttaagtgatgtatctgt |
13517028 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|||| |||||||| |||| ||| |||||||||||||||||| | || || |||| |||||||||||||||||| ||||||| ||||| || | ||| |
|
|
| T |
13517029 |
ggtgggatgcaaaaacttgataaacctctttccactctcagtggttaaaggtatgttgcaacttcaaagtcttcgagtaagtaaatgtggcatccaagaa |
13517128 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
13517129 |
attgttgccaaggaaga |
13517145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16454235 - 16454016
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
|||||||| || ||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || || || |
|
|
| T |
16454235 |
tgaagaaactaaaactatctaatgttccaaaactgaagcatgtatggaaggaggatccacatgacactatgaggtttcaaaatttaagtgaagtgtcagt |
16454136 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| |||||||| ||| ||| | || ||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
16454135 |
tgaggaatgcacaagtttgattagtatctttccgctcacagtagctagagatatgatgcaacttcaaagtcttcgagtaagtaactgtgggattgaagaa |
16454036 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
16454035 |
attgttgccaaggaagaagg |
16454016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16463392 - 16463173
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
|||||||| || ||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || || || |
|
|
| T |
16463392 |
tgaagaaactaaaactatctaatgttccaaaactgaagcatgtatggaaggaggatccacatgacactatgaggtttcaaaatttaagtgaagtgtcagt |
16463293 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| |||||||| ||| ||| | || ||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
16463292 |
tgaggaatgcacaagtttgattagtatctttccgctcacagtagctagagatatgatgcaacttcaaagtcttcgagtaagtaactgtgggattgaagaa |
16463193 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
16463192 |
attgttgccaaggaagaagg |
16463173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20377593 - 20377809
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
20377593 |
tgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatccgt |
20377692 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||| ||||| | ||| ||| ||||||||| | ||| |
|
|
| T |
20377693 |
tgtgggatgcaatagcttgataagcctctttccactttcagtagctagagatgtgatgcaacttcaaaatcttcaagtaattaaatgtgggattcaagaa |
20377792 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
|| |||| || |||||| |
|
|
| T |
20377793 |
atcgttgccagggaaga |
20377809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20486110 - 20486329
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
20486110 |
tgaagaaattaaaactatctaatcttccaaatctgaagcatgtatggaaggatgatccacattacactattaggtttgaaaatttaattgatatatctgt |
20486209 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| |||||| |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||| | ||||| | ||||| ||| | ||| |
|
|
| T |
20486210 |
tgaggaatgtgaaagcttgacaagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttaaagtaagtcagtgtggtattcaagaa |
20486309 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
20486310 |
attgttggcaaggaagaagg |
20486329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 19189633 - 19189439
Alignment:
| Q |
26 |
tccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgttgtggaatgcaaaagcttgttaagc |
125 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||| | |
|
|
| T |
19189633 |
tccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatctgttgaggaatgtgaaaacttgataaac |
19189534 |
T |
|
| Q |
126 |
ctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaattgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||||||||||||| |||| || |||| |||||||||||||||||| ||||||| ||||| || | |||||||||| |||||||||||| |
|
|
| T |
19189533 |
ctctttccactctcagtggctaaaggtatgttgcaacttcaaagtcttcgagtaagtaaatgtggcatccaagaaattgttgccaaggaagaagg |
19189439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16492323 - 16492104
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||| ||| ||||| || |
|
|
| T |
16492323 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggaaaatccacatagcacaatgaggtttcaaaatttaaatgaagtatcggt |
16492224 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| ||||| || ||||||| ||||| |||||| | ||||||||| ||||||||| || ||||||| ||||| | ||||| | | ||| ||||| ||| |
|
|
| T |
16492223 |
tgaggaatacagaagcttgataagcaactttccgcactcagtagcacgagatatgatactacttcaagatcttctagtaagtgattctggaattgaagaa |
16492124 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||| | ||| |||||||| |
|
|
| T |
16492123 |
attgtcgccaatgaagaagg |
16492104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13653024 - 13653077
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagagg |
54 |
Q |
| |
|
|||||||| || || |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13653024 |
tgaagaaactaaaaatatctaatcttccaaaactgaagcatgtatggaaagagg |
13653077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 120481 - 120700
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
120481 |
tgaagaaattagaactattcaatctaccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
120580 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||| ||| |
|
|
| T |
120581 |
tgtggaatgtgaaagcttgataagcctctttccactctcagttgctagagatatgatgcaacttcaaagacttcatgtaagtaactgtgggattgaagaa |
120680 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
120681 |
attgttgcaaaggaagaagg |
120700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 21816797 - 21817014
Alignment:
| Q |
3 |
aagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgttg |
102 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| |
|
|
| T |
21816797 |
aagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacacactgaggtttgaaaatttaagtgatgtttctgttg |
21816896 |
T |
|
| Q |
103 |
tggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaat |
202 |
Q |
| |
|
||| ||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||||| ||||||||||| ||||| |
|
|
| T |
21816897 |
tgggatgcaaaagcttgatgagcctctttccactctcagttgctagagatatgaagcaacttcaaagtcttcaagtaagtaaatgtgggattgaagaaat |
21816996 |
T |
|
| Q |
203 |
tgttgtcaaggaagaagg |
220 |
Q |
| |
|
||| | |||||||||||| |
|
|
| T |
21816997 |
tgtggccaaggaagaagg |
21817014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 217
Target Start/End: Complemental strand, 22273870 - 22273659
Alignment:
| Q |
6 |
aaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgttgtgg |
105 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22273870 |
aaattaaaactatctaatcttccaaaactgaagcatgtatggaaggaggatccacataacactgtgaggtttcaaaatttaaatgatgtatctgttgtgg |
22273771 |
T |
|
| Q |
106 |
aatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaattgt |
205 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||||| || || || | |||||||| |
|
|
| T |
22273770 |
gatgcagaagcttgataagcctctttccactctcagtggctagtgatatgatgaaaattcaaagtcttcgagtaagtaaatgcggcatccaagaaattgt |
22273671 |
T |
|
| Q |
206 |
tgtcaaggaaga |
217 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
22273670 |
tgccaaggaaga |
22273659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 5e-77; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 20850026 - 20849821
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20850026 |
tgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccatattacactatgaggtttgaaaatttaagtgatgtatctgt |
20849927 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| | || ||| |||||||||| | ||| |
|
|
| T |
20849926 |
tgtggattgcaaaagcttgataagcctctttccattctcagtggctagagatatgatgcaacttcaaagtcttccagtacgtagctgtgggattcaagaa |
20849827 |
T |
|
| Q |
201 |
attgtt |
206 |
Q |
| |
|
|||||| |
|
|
| T |
20849826 |
attgtt |
20849821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20769375 - 20769156
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20769375 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggtggatccacattacactatgaggtttcaaaatttaagtgatgtgtctgt |
20769276 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| ||| ||| |||||||| ||||||||||||||||||| || |||||||||||||| || ||||||||||||||| | ||||| ||||||||| | ||| |
|
|
| T |
20769275 |
tggggattgcgaaagcttgataagcctctttccactctctgtggctagagatatgaagcagcttcaaagtcttcgagttagtaaatgtgggattcaagaa |
20769176 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
20769175 |
attgttggcaaggaagaagg |
20769156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20779169 - 20778950
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20779169 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggtggatccacattacactatgaggtttcaaaatttaagtgatgtgtctgt |
20779070 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| ||| ||| |||||||| ||||||||||||||||||| || |||||||||||||| || ||||||||||||||| | ||||| ||||||||| | ||| |
|
|
| T |
20779069 |
tggggattgcgaaagcttgataagcctctttccactctctgtggctagagatatgaagcagcttcaaagtcttcgagttagtaaatgtgggattcaagaa |
20778970 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
20778969 |
attgttggcaaggaagaagg |
20778950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20806252 - 20806033
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
20806252 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgatgtatctgt |
20806153 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||||| ||||||||| | ||| |
|
|
| T |
20806152 |
tgtgggatgcaatagcttgataagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtaagtgtgggattcaagaa |
20806053 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
|| || | |||||||||||| |
|
|
| T |
20806052 |
atcgtggccaaggaagaagg |
20806033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 20841932 - 20841727
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
|||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20841932 |
tgaaaaaattaaaactattcaatcttccaaaactgaaacatgtatggaaagaggatccacattacactatgaggtttgaaaatttaagtgatgtatctgt |
20841833 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| | || ||| |||||||||| | ||| |
|
|
| T |
20841832 |
tgtggattgcaaaagcttgataagcctctttccattctcagtggctagagatatgatgcaacttcaaagtcttccagtacgtagctgtgggattcaagaa |
20841733 |
T |
|
| Q |
201 |
attgtt |
206 |
Q |
| |
|
|||||| |
|
|
| T |
20841732 |
attgtt |
20841727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 20835164 - 20834958
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
20835164 |
tgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatccgt |
20835065 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| | ||| ||| ||||||||| | ||| |
|
|
| T |
20835064 |
tgtgggatgcaatagcttgataagcttctttccactttcagtagctagagatatgatgcaacttcaaagtcttctagtaattaaatgtgggattcaagaa |
20834965 |
T |
|
| Q |
201 |
attgttg |
207 |
Q |
| |
|
||||||| |
|
|
| T |
20834964 |
attgttg |
20834958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20772324 - 20772108
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20772324 |
tgaagaaattaaaattatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgcggtttcaaaatttaagtgatgtatctgt |
20772225 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|||| |||||||| |||| ||| | |||||||||||||||| |||| || |||| |||||||||||||||||| ||||||| |||| || | ||| |
|
|
| T |
20772224 |
ggtgggatgcaaaaacttgataaacatctttccactctcagtggctaaaggtatgttgcaacttcaaagtcttcgagtaagtaaaagtggcatccaagaa |
20772125 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
20772124 |
attgttgccaaggaaga |
20772108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20782118 - 20781902
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20782118 |
tgaagaaattaaaattatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgcggtttcaaaatttaagtgatgtatctgt |
20782019 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|||| |||||||| |||| ||| | |||||||||||||||| |||| || |||| |||||||||||||||||| ||||||| |||| || | ||| |
|
|
| T |
20782018 |
ggtgggatgcaaaaacttgataaacatctttccactctcagtggctaaaggtatgttgcaacttcaaagtcttcgagtaagtaaaagtggcatccaagaa |
20781919 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
20781918 |
attgttgccaaggaaga |
20781902 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 38052981 - 38052762
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38052981 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
38052882 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| ||| | | |||| |||||||||||||||||||| | |||| |||||||| ||||||||| |||||| | | ||||||||||||||||| ||| |
|
|
| T |
38052881 |
tgtgggatgtgagaacttgataagcctctttccactctcactggctaaagatatgatgcaacttcaatgtcttctagtcagtaactgtgggattgaagaa |
38052782 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
38052781 |
attgttgccaaggaagaagg |
38052762 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 30703030 - 30702815
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30703030 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatcgaaagaggatccacattaccctatgaggtttcaaaatttaagtgatgtatctgt |
30702931 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| |||||||||||||||| ||||| ||||||||||||| || |||||||||||| |||||||||||||||| | |||||| ||||||||| | ||| |
|
|
| T |
30702930 |
tgcggaatgcaaaagcttgataagcttctttccactctcggtttctagagatatgatgcaacttcaaagtcttcaagcaagtaattgtgggattcaagaa |
30702831 |
T |
|
| Q |
201 |
attgttgtcaaggaag |
216 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
30702830 |
attgttgccaaggaag |
30702815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 38055179 - 38054960
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
38055179 |
tgaagaaattaaaactatctaatcttccaaaattgaagcatgtatggaaggaggatccacattacactatgaggtttcaaaatataaatgatgtatatgt |
38055080 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
| |||||| |||| ||| |||||||||||||||||||||| ||||||||||| | |||||||||||||| | ||||||||||||||||| | ||| |
|
|
| T |
38055079 |
taaggaatgtgaaagtttgataagcctctttccactctcagtggctagagatataatgcaacttcaaagtctgaaagtaagtaactgtgggattcaagaa |
38054980 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
|| |||| |||||| ||||| |
|
|
| T |
38054979 |
atcgttgccaaggacgaagg |
38054960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 42219 - 42438
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42219 |
tgaagaaattaaaactatctaatctttcaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatctgt |
42318 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| ||||||||||||| ||||||| ||||| ||||||| |||||||||||||||| | ||||| | ||||||||| | ||| |
|
|
| T |
42319 |
tgtgggatgcaatagcttgataagcctctttccgttctcagtggctagcgatatgatgcaacttcaaagtcttcaagtaagtcagtgtgggattcaagaa |
42418 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||| | |||||||||||| |
|
|
| T |
42419 |
attgtggccaaggaagaagg |
42438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 47895 - 48111
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
47895 |
tgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatccgt |
47994 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||| ||||| | ||| ||| ||||||||| | ||| |
|
|
| T |
47995 |
tgtgggatgcaatagcttgataagcctctttccactttcagtagctagagatgtgatgcaacttcaaaatcttcaagtaattaaatgtgggattcaagaa |
48094 |
T |
|
| Q |
201 |
attgttgtcaaggaaga |
217 |
Q |
| |
|
|| |||| || |||||| |
|
|
| T |
48095 |
atcgttgccagggaaga |
48111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 11664 - 11883
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
11664 |
tgaagaaattaaaactatctaatcttccaaatctgaagcatgtatggaaggatgatccacattacactattaggtttgaaaatttaattgatatatctgt |
11763 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| |||||| |||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||| | ||||||||| | ||| |
|
|
| T |
11764 |
tgaggaatgtgaaagcttgacaagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtcagtgtgggattcaagaa |
11863 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
11864 |
attgttggcaaggaagaagg |
11883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 7099 - 7318
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
7099 |
tgaagaaattaaaactatctaatcttccaaatctgaagcatgtatggaaggatgatccacattacactattaggtttgaaaatttaattgatatatctgt |
7198 |
T |
|
| Q |
101 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
200 |
Q |
| |
|
|| |||||| |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||| | ||||| | ||||| ||| | ||| |
|
|
| T |
7199 |
tgaggaatgtgaaagcttgacaagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttaaagtaagtcagtgtggtattcaagaa |
7298 |
T |
|
| Q |
201 |
attgttgtcaaggaagaagg |
220 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
7299 |
attgttggcaaggaagaagg |
7318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34390 - 34281
Alignment:
| Q |
1 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
100 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
34390 |
tgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgatgtatctgt |
34291 |
T |
|
| Q |
101 |
tgtggaatgc |
110 |
Q |
| |
|
||||| |||| |
|
|
| T |
34290 |
tgtgggatgc |
34281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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