View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8650_low_43 (Length: 226)

Name: NF8650_low_43
Description: NF8650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8650_low_43
NF8650_low_43
[»] chr3 (34 HSPs)
chr3 (1-226)||(10820511-10820736)
chr3 (88-226)||(1629962-1630108)
chr3 (3-66)||(13657888-13657951)
chr3 (3-62)||(10820218-10820277)
chr3 (3-74)||(31324478-31324549)
chr3 (3-66)||(7515392-7515455)
chr3 (3-66)||(11218055-11218118)
chr3 (3-66)||(13712025-13712088)
chr3 (3-66)||(17580114-17580177)
chr3 (3-66)||(26997190-26997253)
chr3 (3-65)||(3750592-3750654)
chr3 (3-65)||(13712353-13712415)
chr3 (3-61)||(25147120-25147178)
chr3 (3-73)||(29777231-29777300)
chr3 (3-64)||(47220534-47220595)
chr3 (7-64)||(49122753-49122810)
chr3 (3-43)||(11218350-11218390)
chr3 (3-43)||(17579761-17579801)
chr3 (3-43)||(24098287-24098327)
chr3 (3-43)||(29777536-29777576)
chr3 (3-66)||(1772011-1772074)
chr3 (3-62)||(50293881-50293940)
chr3 (3-45)||(10820295-10820337)
chr3 (3-61)||(11871393-11871451)
chr3 (3-65)||(11871685-11871747)
chr3 (3-61)||(33623404-33623462)
chr3 (3-44)||(11218410-11218451)
chr3 (3-76)||(29231155-29231225)
chr3 (3-64)||(47220222-47220283)
chr3 (3-68)||(48382286-48382351)
chr3 (3-43)||(1771725-1771765)
chr3 (3-43)||(11218319-11218359)
chr3 (3-43)||(26997517-26997557)
chr3 (3-43)||(43122911-43122951)
[»] chr8 (43 HSPs)
chr8 (3-66)||(29276613-29276676)
chr8 (3-74)||(24469517-24469588)
chr8 (3-67)||(6121499-6121563)
chr8 (3-43)||(29457134-29457174)
chr8 (3-66)||(29218337-29218400)
chr8 (3-73)||(2250694-2250764)
chr8 (3-68)||(15300572-15300638)
chr8 (3-68)||(15480941-15481007)
chr8 (3-73)||(31827201-31827271)
chr8 (3-66)||(22444995-22445058)
chr8 (3-66)||(44728102-44728165)
chr8 (3-73)||(6121899-6121969)
chr8 (3-69)||(22444594-22444660)
chr8 (3-61)||(22780058-22780116)
chr8 (3-61)||(27702647-27702705)
chr8 (3-73)||(28464047-28464117)
chr8 (3-61)||(38507060-38507118)
chr8 (3-64)||(9117497-9117558)
chr8 (3-64)||(15891566-15891627)
chr8 (3-43)||(6953-6993)
chr8 (3-67)||(2251100-2251164)
chr8 (3-67)||(2257046-2257110)
chr8 (3-43)||(9779186-9779226)
chr8 (3-43)||(24043747-24043787)
chr8 (3-67)||(28463797-28463861)
chr8 (3-43)||(35435631-35435671)
chr8 (6-73)||(2257449-2257516)
chr8 (3-66)||(15315420-15315483)
chr8 (3-66)||(15495789-15495852)
chr8 (7-65)||(1043632-1043690)
chr8 (3-65)||(9117823-9117884)
chr8 (3-45)||(11482666-11482708)
chr8 (7-69)||(15315090-15315152)
chr8 (7-69)||(15495459-15495521)
chr8 (3-61)||(44318529-44318587)
chr8 (4-61)||(23404130-23404187)
chr8 (3-43)||(42620828-42620869)
chr8 (3-43)||(4157593-4157633)
chr8 (3-43)||(15315175-15315215)
chr8 (3-43)||(15495544-15495584)
chr8 (3-43)||(15891647-15891687)
chr8 (3-43)||(15891832-15891872)
chr8 (7-43)||(31618373-31618409)
[»] chr4 (38 HSPs)
chr4 (3-76)||(25154845-25154918)
chr4 (3-66)||(40289744-40289807)
chr4 (3-68)||(14336946-14337011)
chr4 (3-66)||(13846589-13846652)
chr4 (3-66)||(34979473-34979536)
chr4 (16-65)||(25363621-25363669)
chr4 (16-64)||(32557387-32557435)
chr4 (3-43)||(32751397-32751437)
chr4 (3-63)||(41898115-41898175)
chr4 (3-66)||(21956415-21956478)
chr4 (7-66)||(29031661-29031720)
chr4 (7-66)||(29043781-29043840)
chr4 (3-62)||(40289348-40289407)
chr4 (4-63)||(40998104-40998163)
chr4 (3-65)||(18598583-18598645)
chr4 (3-65)||(20421055-20421117)
chr4 (3-61)||(21956021-21956079)
chr4 (3-64)||(25363263-25363323)
chr4 (3-68)||(50523051-50523116)
chr4 (3-64)||(53856464-53856525)
chr4 (3-64)||(55358583-55358644)
chr4 (3-67)||(9860970-9861034)
chr4 (3-43)||(25154570-25154610)
chr4 (23-66)||(5322494-5322537)
chr4 (3-70)||(27389776-27389843)
chr4 (3-66)||(35778684-35778747)
chr4 (3-45)||(7632836-7632878)
chr4 (2-40)||(13863983-13864021)
chr4 (3-65)||(15631692-15631753)
chr4 (3-43)||(7633025-7633065)
chr4 (3-43)||(14336641-14336681)
chr4 (3-43)||(18598207-18598247)
chr4 (3-43)||(20421137-20421177)
chr4 (3-43)||(26554000-26554040)
chr4 (3-43)||(29031281-29031321)
chr4 (3-43)||(29043400-29043440)
chr4 (3-43)||(32751337-32751377)
chr4 (3-43)||(41898379-41898419)
[»] chr5 (32 HSPs)
chr5 (3-66)||(28571032-28571095)
chr5 (3-65)||(39804929-39804991)
chr5 (3-67)||(18008509-18008573)
chr5 (3-67)||(27495873-27495937)
chr5 (3-66)||(27496171-27496234)
chr5 (3-66)||(42091988-42092051)
chr5 (3-45)||(2802889-2802931)
chr5 (3-73)||(6642116-6642186)
chr5 (3-65)||(28574722-28574784)
chr5 (3-67)||(42092274-42092338)
chr5 (3-66)||(21250649-21250712)
chr5 (7-66)||(35171682-35171741)
chr5 (3-45)||(2796728-2796770)
chr5 (3-61)||(8943257-8943315)
chr5 (7-73)||(18008163-18008229)
chr5 (3-68)||(2797004-2797069)
chr5 (3-68)||(2803165-2803230)
chr5 (3-60)||(5361543-5361600)
chr5 (3-64)||(17849766-17849827)
chr5 (3-43)||(1069184-1069224)
chr5 (3-67)||(6641788-6641851)
chr5 (3-43)||(8942881-8942921)
chr5 (3-67)||(26006398-26006461)
chr5 (3-71)||(39805227-39805295)
chr5 (3-66)||(20429597-20429660)
chr5 (17-64)||(42375414-42375461)
chr5 (3-45)||(29440121-29440163)
chr5 (17-66)||(3124208-3124257)
chr5 (14-67)||(42375822-42375874)
chr5 (3-43)||(21250273-21250313)
chr5 (3-43)||(27319003-27319043)
chr5 (3-43)||(38085411-38085451)
[»] chr1 (24 HSPs)
chr1 (3-62)||(48074457-48074516)
chr1 (3-66)||(1695701-1695764)
chr1 (3-65)||(29987198-29987260)
chr1 (3-63)||(5739538-5739598)
chr1 (3-63)||(39833987-39834047)
chr1 (3-79)||(39834313-39834389)
chr1 (10-66)||(41810994-41811050)
chr1 (3-58)||(32712166-32712221)
chr1 (3-66)||(38823784-38823847)
chr1 (3-66)||(45721520-45721583)
chr1 (3-61)||(45721128-45721186)
chr1 (3-68)||(18030185-18030250)
chr1 (3-60)||(20492060-20492117)
chr1 (7-60)||(41542729-41542782)
chr1 (3-63)||(4765147-4765207)
chr1 (3-43)||(5277309-5277349)
chr1 (3-66)||(29987525-29987588)
chr1 (16-63)||(41524607-41524654)
chr1 (3-61)||(5739373-5739431)
chr1 (3-41)||(29386407-29386445)
chr1 (3-43)||(4965107-4965147)
chr1 (3-43)||(15615484-15615524)
chr1 (3-43)||(20491719-20491759)
chr1 (3-43)||(49113222-49113262)
[»] scaffold0051 (2 HSPs)
scaffold0051 (3-73)||(60460-60530)
scaffold0051 (3-66)||(60770-60833)
[»] chr6 (8 HSPs)
chr6 (3-69)||(24012558-24012624)
chr6 (3-66)||(9049807-9049870)
chr6 (1-63)||(7858589-7858651)
chr6 (3-64)||(4799607-4799668)
chr6 (3-65)||(29134905-29134966)
chr6 (2-48)||(33041046-33041092)
chr6 (3-61)||(5985774-5985832)
chr6 (3-43)||(4799333-4799373)
[»] chr2 (33 HSPs)
chr2 (3-69)||(45638050-45638116)
chr2 (3-71)||(11973908-11973976)
chr2 (3-67)||(36387254-36387318)
chr2 (3-62)||(5482869-5482928)
chr2 (3-61)||(4603797-4603855)
chr2 (3-64)||(5247910-5247971)
chr2 (3-64)||(43865348-43865409)
chr2 (3-66)||(7438491-7438554)
chr2 (3-66)||(30851055-30851118)
chr2 (3-66)||(34334523-34334586)
chr2 (7-65)||(43671177-43671235)
chr2 (3-65)||(45638381-45638443)
chr2 (3-75)||(5483193-5483265)
chr2 (3-76)||(15286126-15286199)
chr2 (3-64)||(35125631-35125692)
chr2 (3-67)||(1844552-1844616)
chr2 (3-43)||(11974212-11974252)
chr2 (3-43)||(28182446-28182486)
chr2 (3-71)||(28582370-28582438)
chr2 (17-76)||(1039207-1039266)
chr2 (3-66)||(7881983-7882046)
chr2 (3-66)||(15285787-15285850)
chr2 (3-66)||(35125335-35125398)
chr2 (3-61)||(15787043-15787101)
chr2 (3-41)||(28238450-28238488)
chr2 (3-57)||(29683579-29683633)
chr2 (3-65)||(42553747-42553809)
chr2 (3-64)||(44436414-44436475)
chr2 (3-59)||(1038872-1038928)
chr2 (3-43)||(4603463-4603503)
chr2 (10-42)||(28238828-28238860)
chr2 (3-43)||(29683885-29683925)
chr2 (3-43)||(43671259-43671299)
[»] chr7 (31 HSPs)
chr7 (3-64)||(3173218-3173279)
chr7 (3-68)||(46855318-46855383)
chr7 (3-66)||(42758935-42758998)
chr7 (3-65)||(48840298-48840360)
chr7 (3-63)||(42430679-42430739)
chr7 (3-62)||(18942617-18942676)
chr7 (3-66)||(44448991-44449054)
chr7 (3-66)||(45909993-45910056)
chr7 (3-73)||(47193558-47193628)
chr7 (3-43)||(8919566-8919606)
chr7 (3-43)||(18942312-18942352)
chr7 (7-67)||(36987088-36987148)
chr7 (3-67)||(45443436-45443500)
chr7 (7-75)||(48839994-48840061)
chr7 (3-74)||(22564026-22564097)
chr7 (3-62)||(35127436-35127495)
chr7 (7-70)||(37043371-37043434)
chr7 (3-62)||(42759263-42759322)
chr7 (4-62)||(22641893-22641951)
chr7 (3-73)||(37393305-37393375)
chr7 (3-44)||(10097080-10097121)
chr7 (3-60)||(45324559-45324616)
chr7 (3-71)||(6723516-6723584)
chr7 (3-43)||(8919782-8919822)
chr7 (3-67)||(9907467-9907531)
chr7 (7-43)||(10470843-10470879)
chr7 (3-75)||(38995271-38995343)
chr7 (9-45)||(41718026-41718062)
chr7 (3-43)||(42759018-42759058)
chr7 (13-45)||(45324840-45324872)
chr7 (3-43)||(45324890-45324930)
[»] scaffold0062 (1 HSPs)
scaffold0062 (3-71)||(11704-11772)
[»] scaffold0121 (1 HSPs)
scaffold0121 (3-61)||(23652-23710)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-60)||(202279-202336)
[»] scaffold0220 (1 HSPs)
scaffold0220 (3-43)||(21831-21871)
[»] scaffold0182 (1 HSPs)
scaffold0182 (3-43)||(22213-22253)


Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10820511 - 10820736
Alignment:
Q  1 tcaaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataatttctttggtgaatttttattttatc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  10820511 tcaaacttaaaggacctatctgaaacaaacatgaaacttaaaggatccgagaaggtatttggcctataaaataatttctttggtgaatttttattttata 10820610  T
Q  101 ttttgaagttctaaaattttatactaagataggtttataatatttaaattataattgtggctttcttacctgcaattactttcatgtttttaaataatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  10820611 ttttgaagttctaaaattttatactaagataggtttataatatttaaattataattgtggctttcttacctacaattactttcatatttttaaataatta 10820710  T
Q  201 ctcttggatcatttaaatttaggtat 226  Q
    ||||||||||||||||||||||||||    
T  10820711 ctcttggatcatttaaatttaggtat 10820736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 1630108 - 1629962
Alignment:
Q  88 tttttattttatcttttgaagttctaaaattttatactaagataggtttataatatttaaattataattgtggctttcttacctg----caattactttc 183  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||    |||||||||||    
T  1630108 tttttattttatcatttgaagttctaaatttttataataagataggtttataatatttaaattatacttgaggctttcttacatgcatacaattactttc 1630009  T
Q  184 atgt----ttttaaataattactcttggatcatttaaatttaggtat 226  Q
    || |    |||||||||||||||||||||||||||||||||||||||    
T  1630008 attttttattttaaataattactcttggatcatttaaatttaggtat 1629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 13657951 - 13657888
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  13657951 aaacttaaatgatctatctgaaacaaacatgaaacttaaagtacccggggaggtatttggccta 13657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 10820277 - 10820218
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||| || ||||||||||||||| |||||||||||| |||| |||||||||||||    
T  10820277 aaacttaaaggatctatctgaaacaaacgtgaaacttaaaggatccaaggaggtatttgg 10820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 31324478 - 31324549
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataa 74  Q
    ||||||||| |||||||||||||||||| |||||||||||| | |   |||||||||||||||| |||||||    
T  31324478 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggaccaagggaggtatttggcctaaaaaataa 31324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 7515455 - 7515392
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||| |||||||||||| | |   ||||||||||||||||    
T  7515455 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggccta 7515392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 11218118 - 11218055
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||||| |||||||||  | ||  ||||||||||||||||    
T  11218118 aaacttaaaggacctatctgaaacaaacataaaacttaaatgacccatggaggtatttggccta 11218055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 13712088 - 13712025
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| ||  |||||||||||||||| |||||||||| | ||| ||||||||||||||||    
T  13712088 aaacttaaaggatttatctgaaacaaacataaaacttaaaggacccggggaggtatttggccta 13712025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 17580114 - 17580177
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    |||||||||| | |||||| |||||||||| ||| |||||| ||||| ||||||||||||||||    
T  17580114 aaacttaaaaaatctatctaaaacaaacataaaatttaaaggatccggggaggtatttggccta 17580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 26997253 - 26997190
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| ||||||| ||||||||||||||||||||||| | |   ||||||||||||||||    
T  26997253 aaacttaaaggacctatttgaaacaaacatgaaacttaaaggacctagggaggtatttggccta 26997190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 3750654 - 3750592
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||  |||||||| ||||||    
T  3750654 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatctggcct 3750592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 13712353 - 13712415
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||  |||| ||||||||||    
T  13712353 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccatggagatatttggcct 13712415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 25147178 - 25147120
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||||||||||||||||||||||||  | ||| |||||||||||    
T  25147178 aaacttaaatgatctatctgaaacaaacatgaaacttaaaagacccggggaggtatttg 25147120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 29777300 - 29777231
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    ||||||||| || ||||||||||||||||| |||| ||||| | ||| |||||||||||||||| ||||||    
T  29777300 aaacttaaaggatctatctgaaacaaacataaaacgtaaaggacccg-ggaggtatttggcctacaaaata 29777231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 47220534 - 47220595
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||||| ||||||||||||||||||||  ||||| |||| |||||||||    
T  47220534 aaacttaaaggatctatcttaaacaaacatgaaacttaaacgatccggggagatatttggcc 47220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 49122810 - 49122753
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    |||||||| ||||||||||||||||| ||| |||||| ||||| ||| ||||||||||    
T  49122810 ttaaaagatctatctgaaacaaacataaaatttaaaggatccggggaagtatttggcc 49122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 11218350 - 11218390
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  11218350 aaacttaaaggacctatctgaaacaaacttgaaacttaaag 11218390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 17579801 - 17579761
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  17579801 aaacttaaagaacctatctgaaacaaacatgaaacttaaag 17579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 24098287 - 24098327
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  24098287 aaacttaaaggacctatctgaaacaaacgtgaaacttaaag 24098327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 29777536 - 29777576
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  29777536 aaacttaaatgacctatctgaaacaaacgtgaaacttaaag 29777576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 1772011 - 1772074
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| ||||||| |||||||||| |||||||||||| | ||   |||||||||||||||    
T  1772011 aaacttaaaggacctatatgaaacaaacgtgaaacttaaaggacccagtgaggtatttggccta 1772074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 50293881 - 50293940
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||| || ||||||||||||||||| ||||||| || | |||| |||||||||||    
T  50293881 aaacttaaaggatctatctgaaacaaacataaaacttataggacccgaagaggtatttgg 50293940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 10820337 - 10820295
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    |||||||||||||||||| |||||||||  |||||||||||||    
T  10820337 aaacttaaaagacctatccgaaacaaactcgaaacttaaagaa 10820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 11871451 - 11871393
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| ||||||||||||||| || |||||||||||| | ||  |||||||||||    
T  11871451 aaacttaaaggacctatctgaaacagacgtgaaacttaaaggacccagggaggtatttg 11871393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 11871685 - 11871747
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| || ||||||||||||||||| ||| ||| || | ||| |||||||||||||||    
T  11871685 aaacttaaaggatctatctgaaacaaacataaaatttataggacccggggaggtatttggcct 11871747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 33623404 - 33623462
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| ||||||||| ||||| || |||||||||||| ||||  |||||||||||    
T  33623404 aaacttaaaggacctatctaaaacagacgtgaaacttaaaggatccagggaggtatttg 33623462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 11218410 - 11218451
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaaga 44  Q
    ||||||||| || |||||||||| ||||||||||||||||||    
T  11218410 aaacttaaaggatctatctgaaataaacatgaaacttaaaga 11218451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 29231155 - 29231225
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataatt 76  Q
    |||||||||| | ||||||||| |||||||||||||||||  ||||| |||| ||||||||||| |||||||||    
T  29231155 aaacttaaaa-atctatctgaa-caaacatgaaacttaaaagatccggggagttatttggccta-aaaataatt 29231225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 47220283 - 47220222
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    |||||||||  |||||||| |||||||| |||||||||||||| ||   |||||||||||||    
T  47220283 aaacttaaagaacctatcttaaacaaacgtgaaacttaaagaacccagagaggtatttggcc 47220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 48382286 - 48382351
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||| || |||||||||||||| ||||||||||||  | |||||  |||||||| ||||||    
T  48382286 aaacttaaatgatctatctgaaacaaatatgaaacttaaaagacccgagccggtatttgacctata 48382351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 1771765 - 1771725
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  1771765 aaacttaaaggacctatctgaaacaaactcgaaacttaaag 1771725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 11218319 - 11218359
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||| |||||||||||||| ||||||||||||    
T  11218319 aaacttaaaggacttatctgaaacaaacttgaaacttaaag 11218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 26997517 - 26997557
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||||||||||| |||||||||    
T  26997517 aaacttaaaggatctatctgaaacaaacatggaacttaaag 26997557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 43122911 - 43122951
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  43122911 aaacttaaacgatctatctgaaaaaaacatgaaacttaaag 43122951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 29276676 - 29276613
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  29276676 aaacttaaaggacctatctgaaacaaacatgaaacttaaagaatccagggaggtatttggccta 29276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 24469517 - 24469588
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataa 74  Q
    ||||||||| || ||||||||||||||||||||| |||||| | ||| |||||||||||||||| |||||||    
T  24469517 aaacttaaaggatctatctgaaacaaacatgaaatttaaaggacccggggaggtatttggcctaaaaaataa 24469588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 6121563 - 6121499
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| || |||||| ||||||||||||||||||||| | ||| |||||||||||||||||    
T  6121563 aaacttaaaggatctatctaaaacaaacatgaaacttaaaggacccggggaggtatttggcctat 6121499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 29457174 - 29457134
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29457174 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 29457134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 29218400 - 29218337
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||  ||||||||||| ||||    
T  29218400 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagggaggtatttgaccta 29218337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 2250764 - 2250694
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    ||||||||| ||||| | | |||||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  2250764 aaacttaaaggacctgtataaaacaaacatgaaacttaaagaactcgaggaggtatttggccaacaaaata 2250694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 15300638 - 15300572
Alignment:
Q  3 aaacttaaaag-acctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||   |||||||||||| ||||    
T  15300638 aaacttaaaaggacctatctgaaacaaacatgaaacttaaagaacccagcgaggtatttggcttata 15300572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 15481007 - 15480941
Alignment:
Q  3 aaacttaaaag-acctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||   |||||||||||| ||||    
T  15481007 aaacttaaaaggacctatctgaaacaaacatgaaacttaaagaacccagcgaggtatttggcttata 15480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 31827201 - 31827271
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    |||||||||| | |||||||||||||||||||||||||||| ||| | ||| |||||| |||| |||||||    
T  31827201 aaacttaaaaaatctatctgaaacaaacatgaaacttaaagtatctggggatgtattttgcctttaaaata 31827271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 22444995 - 22445058
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| ||  ||||||||||||||||||||||||||||| | | ||||||||||| ||||    
T  22444995 aaacttaaaggatttatctgaaacaaacatgaaacttaaagaacctggggaggtatttgaccta 22445058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 44728165 - 44728102
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||| | | |  |||||||||||||||    
T  44728165 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctggagaggtatttggccta 44728102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 6121899 - 6121969
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    ||||||||| ||| |||||||||||||| |||||||||||| | ||   ||||||||||||| ||||||||    
T  6121899 aaacttaaaggacatatctgaaacaaacgtgaaacttaaaggacccagagaggtatttggccaataaaata 6121969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22444660 - 22444594
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataa 69  Q
    ||||||||| |||||||| ||||||||| |||||||||||| | ||  |||||||||| ||||||||    
T  22444660 aaacttaaaggacctatccgaaacaaacgtgaaacttaaaggacccagggaggtatttcgcctataa 22444594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 22780116 - 22780058
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||||||||||||||||||||||||  | ||| |||||||||||    
T  22780116 aaacttaaaggatctatctgaaacaaacatgaaacttaaatgacccggggaggtatttg 22780058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 27702647 - 27702705
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||||||||||||||||||||||||| |  || |||||||||||    
T  27702647 aaacttaaaggagctatctgaaacaaacatgaaacttaaaggactcgtggaggtatttg 27702705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 28464047 - 28464117
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    |||||||||| |||||||| |||||||| | ||| |||||| |  | ||||||||||||||||||||||||    
T  28464047 aaacttaaaaaacctatctaaaacaaacgtaaaatttaaaggactcaaggaggtatttggcctataaaata 28464117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 38507118 - 38507060
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||||| ||||||||||||||||||| ||||| |||| ||||||    
T  38507118 aaacttaaaggatctatctgagacaaacatgaaacttaaaggatccggggagctatttg 38507060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 9117558 - 9117497
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||||||||||||||||||||||||||  | ||| | ||||||||||||    
T  9117558 aaacttaaaggatctatctgaaacaaacatgaaacttaaaagacccgggaaggtatttggcc 9117497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 15891627 - 15891566
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    |||||| || || |||||||||||||| ||||||||||||| | ||||| ||||||||||||    
T  15891627 aaactttaaggatctatctgaaacaaatatgaaacttaaaggacccgagaaggtatttggcc 15891566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 6993 - 6953
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  6993 aaacttaaaagatatatctgaaacaaacatgaaacttaaag 6953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 2251100 - 2251164
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| |||||||||||||||||| | |||||||||| |  |  |||||||||||||||||    
T  2251100 aaacttaaaggacctatctgaaacaaacgtaaaacttaaaggactcagggaggtatttggcctat 2251164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 2257110 - 2257046
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| |||||||||||||||||| | |||||||||| |  || |||||||||| ||||||    
T  2257110 aaacttaaaggacctatctgaaacaaacgtaaaacttaaaggactcgtggaggtatttagcctat 2257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 9779186 - 9779226
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  9779186 aaacttaaaggacctatctaaaacaaacatgaaacttaaag 9779226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 24043787 - 24043747
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  24043787 aaacttaaaggatctatctgaaacaaacatgaaacttaaag 24043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28463861 - 28463797
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| ||  ||||||||||||||||||||||||||| |  || ||||||||||| |||||    
T  28463861 aaacttaaaggatttatctgaaacaaacatgaaacttaaaggactcggggaggtatttgacctat 28463797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 35435631 - 35435671
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  35435631 aaacttaaaggatctatctgaaacaaacatgaaacttaaag 35435671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 2257449 - 2257516
Alignment:
Q  6 cttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    |||||| ||||| | | ||||||||||||||||||||| |  ||||||||||||||||| | ||||||    
T  2257449 cttaaaggacctgtataaaacaaacatgaaacttaaaggactcgaggaggtatttggccaacaaaata 2257516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 15315420 - 15315483
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || ||||||||||||||||||| |||||||| | ||| || ||||| |||||||    
T  15315420 aaacttaaaggatctatctgaaacaaacatgatacttaaaggacccggggtggtatctggccta 15315483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 15495789 - 15495852
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || ||||||||||||||||||| |||||||| | ||| || ||||| |||||||    
T  15495789 aaacttaaaggatctatctgaaacaaacatgatacttaaaggacccggggtggtatctggccta 15495852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 1043690 - 1043632
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||| || |||| ||||||||||||||||||||||| | ||| |||| ||||||||||    
T  1043690 ttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 1043632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 9117823 - 9117884
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| |||||||||||||||||  |||||||||||| |||| |||  |||||||||||    
T  9117823 aaacttaaaggacctatctgaaacaaatgtgaaacttaaaggatcc-agggagtatttggcct 9117884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 11482666 - 11482708
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    |||||||||  ||||||||||||||||| ||||||||||||||    
T  11482666 aaacttaaagaacctatctgaaacaaacttgaaacttaaagaa 11482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 15315152 - 15315090
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataa 69  Q
    ||||| |||||||||||||||||| |||||||||||| | ||  |||| |||||| |||||||    
T  15315152 ttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggagatatttgacctataa 15315090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 15495521 - 15495459
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataa 69  Q
    ||||| |||||||||||||||||| |||||||||||| | ||  |||| |||||| |||||||    
T  15495521 ttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggagatatttgacctataa 15495459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 44318529 - 44318587
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||| |||| ||||||||||||||||||||  || |||||||||||    
T  44318529 aaacttaaaggatctatttgaagcaaacatgaaacttaaagaacgcggggaggtatttg 44318587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 23404130 - 23404187
Alignment:
Q  4 aacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    |||||||| || |||||||| ||||||||||||||||||| | ||| |||| ||||||    
T  23404130 aacttaaaggatctatctgagacaaacatgaaacttaaaggacccggggagatatttg 23404187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 42620828 - 42620869
Alignment:
Q  3 aaacttaaaag-acctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  42620828 aaacttaaaaggatctatctgaaacaaacatgaaacttaaag 42620869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4157633 - 4157593
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  4157633 aaacttaaaggatctatctgaaataaacatgaaacttaaag 4157593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 15315215 - 15315175
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||| |||||||||| |||||||||||    
T  15315215 aaacttaaaggacctatccgaaacaaacacgaaacttaaag 15315175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 15495584 - 15495544
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||| |||||||||| |||||||||||    
T  15495584 aaacttaaaggacctatccgaaacaaacacgaaacttaaag 15495544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 15891687 - 15891647
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| | ||||||||||    
T  15891687 aaacttaaaggacctatctgaaacaaacttcaaacttaaag 15891647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 15891832 - 15891872
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| | ||||||||||    
T  15891832 aaacttaaaggacctatctgaaacaaacttcaaacttaaag 15891872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 31618409 - 31618373
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  31618409 ttaaaggacctatctgaaacaaacgtgaaacttaaag 31618373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 25154845 - 25154918
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataatt 76  Q
    |||||||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||| | |||||||||    
T  25154845 aaacttaaaagatctatctgaaacaaacatgaaacttaaaggacccggggaggtatttggccaaaaaaataatt 25154918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 40289744 - 40289807
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  40289744 aaacttaaaggatctatctgaaacaaacatgaaacttaaagaacctgaggagatatttggccta 40289807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 14336946 - 14337011
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||| || |||||||||||||||||||||||||||| | | | ||||||||||||||||||    
T  14336946 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctggggaggtatttggcctata 14337011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 13846652 - 13846589
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||| ||||||| |||||  |||||||||||||||    
T  13846652 aaacttaaaggatctatctgaaacaaacatgaaccttaaaggatccggagaggtatttggccta 13846589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 34979536 - 34979473
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||  ||||||||||||||||    
T  34979536 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 34979473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 25363621 - 25363669
Alignment:
Q  16 ctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25363621 ctatctgaaacaaacatgaaacttaaaggatccga-gaggtatttggcct 25363669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 32557387 - 32557435
Alignment:
Q  16 ctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||    
T  32557387 ctatctgaaacaaacatgaaacttaaaggacccgaagaggtatttggcc 32557435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 32751397 - 32751437
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  32751397 aaacttaaaagacctatctgaaacaaacataaaacttaaag 32751437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 41898175 - 41898115
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    ||||||||| |||| ||||||||||||| |||||||||||| | || ||||||||||||||    
T  41898175 aaacttaaaggacccatctgaaacaaacgtgaaacttaaaggacccaaggaggtatttggc 41898115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 21956415 - 21956478
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||| |||||||||||||||||||||| |  |  ||||||||||||||||    
T  21956415 aaacttaaaggacctatccgaaacaaacatgaaacttaaaggactcagggaggtatttggccta 21956478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29031661 - 29031720
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||| || |||| |||||||||||||||| |||||| | ||||||||||||||||||||    
T  29031661 ttaaaggatctatttgaaacaaacatgaaagttaaaggacccgaggaggtatttggccta 29031720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29043781 - 29043840
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||| || |||| |||||||||||||||| |||||| | ||||||||||||||||||||    
T  29043781 ttaaaggatctatttgaaacaaacatgaaagttaaaggacccgaggaggtatttggccta 29043840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 40289407 - 40289348
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    |||||||||  |||||||||||||||||||||||||||||| | ||  ||||||||||||    
T  40289407 aaacttaaagtacctatctgaaacaaacatgaaacttaaaggacccagggaggtatttgg 40289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 40998163 - 40998104
Alignment:
Q  4 aacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    ||||||||||| |||||| |||||||||||||| |||||| ||| |||||| ||||||||    
T  40998163 aacttaaaagatctatctaaaacaaacatgaaatttaaaggatctgaggagatatttggc 40998104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 18598583 - 18598645
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||| | ||||||||| |||||||| |||||||||||| | ||| |||||||||||||||    
T  18598583 aaacttagaggacctatctaaaacaaacttgaaacttaaaggacccggggaggtatttggcct 18598645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 20421117 - 20421055
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||||  | |||||||||||||    
T  20421117 aaacttaaaggacctatctgaaacaaacgttaaacttaaaggatccatgaaggtatttggcct 20421055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 21956079 - 21956021
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||  |||| ||||||    
T  21956079 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagggagatatttg 21956021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 25363323 - 25363263
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| |||||||||||||||||| |||||||||||  | ||| ||||||||||||||    
T  25363323 aaacttaaatgacctatctgaaacaaacgtgaaacttaaacgacccg-ggaggtatttggcc 25363263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 50523116 - 50523051
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||| ||||||||| |||||||| |||||||||||| | | | ||| ||||||||||||||    
T  50523116 aaacttaaatgacctatctaaaacaaacgtgaaacttaaaggacctggggatgtatttggcctata 50523051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 53856525 - 53856464
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||||||  |||| |||||||||||||||||||||| | | | ||||||||||||||    
T  53856525 aaacttaaaagatttatccgaaacaaacatgaaacttaaaggacctggggaggtatttggcc 53856464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 55358583 - 55358644
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || ||||||||||||||| |||||||||||  ||||  ||||||||||||||    
T  55358583 aaacttaaaggatctatctgaaacaaacgtgaaacttaaaagatccagggaggtatttggcc 55358644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 9860970 - 9861034
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    |||||||||||| |||||||||||||||| |||| |||||| | | ||||| ||||||| |||||    
T  9860970 aaacttaaaagatctatctgaaacaaacaagaaatttaaaggaccggaggatgtatttgacctat 9861034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 25154610 - 25154570
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  25154610 aaacttaaaggacctatctgaaacaaacgtgaaacttaaag 25154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 5322537 - 5322494
Alignment:
Q  23 aaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  5322537 aaacaaacatgaaacttaaaggatccggggaggtatttgaccta 5322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 27389843 - 27389776
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaa 70  Q
    ||||||||| |||||||||||||||||| | |||||||| | | ||  ||||||||||||||| ||||    
T  27389843 aaacttaaaggacctatctgaaacaaacgttaaacttaatggacccatggaggtatttggcctttaaa 27389776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 35778747 - 35778684
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||| ||||| |||||| | |   ||||||||||||||||    
T  35778747 aaacttaaaggacctatctgaaacaaacgtgaaatttaaaggacctagggaggtatttggccta 35778684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 7632878 - 7632836
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    ||||||||| || |||||||||| |||||||||||||||||||    
T  7632878 aaacttaaaggatctatctgaaataaacatgaaacttaaagaa 7632836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 13864021 - 13863983
Alignment:
Q  2 caaacttaaaagacctatctgaaacaaacatgaaactta 40  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  13864021 caaacttaaaagacctatctgaaacaaactcgaaactta 13863983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 15631692 - 15631753
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| || |||| ||||||||||||||||||||||| | ||| | |||||||||||||    
T  15631692 aaacttaaaggatctatgtgaaacaaacatgaaacttaaagga-ccgggaaggtatttggcct 15631753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 7633025 - 7633065
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  7633025 aaacttaaaggacctatccgaaacaaacttgaaacttaaag 7633065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 14336681 - 14336641
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| | ||||||||||    
T  14336681 aaacttaaaggacctatctgaaacaaacgtaaaacttaaag 14336641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 18598247 - 18598207
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||| ||||    
T  18598247 aaacttaaaggacctatctgaaacaaacttgaaactcaaag 18598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 20421177 - 20421137
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  20421177 aaacttaaaggacctatctgaaacaaactcgaaacttaaag 20421137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 26554000 - 26554040
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  26554000 aaacttaaaggatctatctgaaataaacatgaaacttaaag 26554040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 29031321 - 29031281
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  29031321 aaacttaaaagacttatctaaaacaaacgtgaaacttaaag 29031281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 29043440 - 29043400
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  29043440 aaacttaaaagacttatctaaaacaaacgtgaaacttaaag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 32751337 - 32751377
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| | ||||||||||    
T  32751337 aaacttaaaggacctatctgaaacaaactttaaacttaaag 32751377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 41898379 - 41898419
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || ||||||||||||||| ||||||||||||    
T  41898379 aaacttaaatgatctatctgaaacaaacttgaaacttaaag 41898419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 28571095 - 28571032
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||| |||||    
T  28571095 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggatccggggaggtatttagccta 28571032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 39804991 - 39804929
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  39804991 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatctgaggaggtatttagcct 39804929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 18008509 - 18008573
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| || |||||||||||||||||||||||||||| |  || |||||||||||||||||    
T  18008509 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggactcggggaggtatttggcctat 18008573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 27495937 - 27495873
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||| |||||||||| ||||||    
T  27495937 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccggggaggtatttagcctat 27495873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 27496171 - 27496234
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||  ||||||||||||||||    
T  27496171 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 27496234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 42092051 - 42091988
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||  ||||||||||||||||    
T  42092051 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 42091988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 2802931 - 2802889
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  2802931 aaacttaaaagatctatctgaaacaaacatgaaacttaaagaa 2802889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 6642116 - 6642186
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    ||||||||| ||||||||| |||||||| || ||||||||| | || ||||||||||||||||| ||||||    
T  6642116 aaacttaaaggacctatctaaaacaaacgtggaacttaaaggacccaaggaggtatttggcctaaaaaata 6642186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 28574722 - 28574784
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    |||||||||||| |||||||||||||| ||||||||||||| | ||| | |||||||||||||    
T  28574722 aaacttaaaagatctatctgaaacaaatatgaaacttaaaggacccgggaaggtatttggcct 28574784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 42092274 - 42092338
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| || |||||| |||||||||||||||||||||  |||| |||||||||| ||||||    
T  42092274 aaacttaaaggatctatctaaaacaaacatgaaacttaaaggctccggggaggtatttcgcctat 42092338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 21250649 - 21250712
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||| | ||| | | ||||||||||||    
T  21250649 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccgggaatgtatttggccta 21250712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 35171741 - 35171682
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||| ||| |||||||||||||| ||||| ||||||||||||  |||||||||||||||    
T  35171741 ttaaaggacatatctgaaacaaacgtgaaatttaaagaatccggagaggtatttggccta 35171682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 2796770 - 2796728
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  2796770 aaacttaaaggatctatctgaaacaaacatgaaacttaaagaa 2796728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 8943257 - 8943315
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || ||||||||||||||||||||||| |||| | ||| |||||||||||    
T  8943257 aaacttaaaggatctatctgaaacaaacatgaaactaaaaggacccggggaggtatttg 8943315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 18008229 - 18008163
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    ||||| |||||||||||||||||| |||||||||||| ||||  | |||||||||||| | ||||||    
T  18008229 ttaaaggacctatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttggccaagaaaata 18008163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2797004 - 2797069
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||| |||||||||||||||||| |||||||||||| | ||  | |||||||||| |||||    
T  2797004 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccaggaaggtatttggactata 2797069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2803165 - 2803230
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||| ||| |||||||||||||| |||||||||||| ||||  | |||||||||| |||||    
T  2803165 aaacttaaaggacatatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttggactata 2803230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 5361543 - 5361600
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtattt 60  Q
    ||||||||| || |||||||||||||||||| ||||||||| | ||| ||||||||||    
T  5361543 aaacttaaatgatctatctgaaacaaacatgcaacttaaaggacccggggaggtattt 5361600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 17849766 - 17849827
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||||||||| ||| ||||||||||||| | ||||||| ||||||||||    
T  17849766 aaacttaaacgatctatctgaaataaatatgaaacttaaaggacccgaggatgtatttggcc 17849827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 1069224 - 1069184
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  1069224 aaacttaaaggacctatctgaaacaaacttgaaacttaaag 1069184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 6641851 - 6641788
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| || |||||||||||||||||||||||| ||| | ||| |||| ||||||||||||    
T  6641851 aaacttaaaggatctatctgaaacaaacatgaaactt-aaggacccggggagatatttggcctat 6641788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 8942921 - 8942881
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  8942921 aaacttaaaggacctatatgaaacaaacatgaaacttaaag 8942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 26006398 - 26006461
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    |||||||||| | |||||||||||||||||||||||||||| | |||  |||||||||| |||||    
T  26006398 aaacttaaaa-atctatctgaaacaaacatgaaacttaaaggacccgcagaggtatttgacctat 26006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 39805227 - 39805295
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaa 71  Q
    ||||||||| ||| |||||||||||||| |||||||||||| | |   |||||||||||||||| ||||    
T  39805227 aaacttaaaggacttatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggcctaaaaaa 39805295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 20429660 - 20429597
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||| | ||||||||||||||||||||  ||||| ||||||||||| ||||    
T  20429660 aaacttaaaggatctattttaaacaaacatgaaacttaaaagatccggggaggtatttgaccta 20429597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 42375461 - 42375414
Alignment:
Q  17 tatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||| ||||||||||||||||||||||| |||  |||||||||||||    
T  42375461 tatcttaaacaaacatgaaacttaaagaacccggagaggtatttggcc 42375414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 29440163 - 29440121
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||    
T  29440163 aaacttaaaggacatatctaaaacaaacatgaaacttaaagaa 29440121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 3124208 - 3124257
Alignment:
Q  17 tatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||| ||||||||  ||||||||||||||||| ||||||||||| ||||    
T  3124208 tatctaaaacaaactcgaaacttaaagaatccggggaggtatttgaccta 3124257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 42375822 - 42375874
Alignment:
Q  14 acctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    |||||||| |||||||| |||||||||||| | || ||||||||||||||||||    
T  42375822 acctatctaaaacaaacgtgaaacttaaagga-cctaggaggtatttggcctat 42375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 21250313 - 21250273
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  21250313 aaactttaaggacctatctgaaacaaacctgaaacttaaag 21250273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 27319003 - 27319043
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||||||||| ||||||||| | ||||||||||    
T  27319003 aaacttaaaagacctatccgaaacaaacttcaaacttaaag 27319043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 38085411 - 38085451
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  38085411 aaacttaaatgatctatctgaaataaacatgaaacttaaag 38085451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 48074457 - 48074516
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  48074457 aaacttaaaggacctatctgaaacaaacataaaacttaaaggatccggggaggtatttgg 48074516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 1695764 - 1695701
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || ||||||||||||||||| |||||||||| | ||| ||||||||||||||||    
T  1695764 aaacttaaaggatctatctgaaacaaacataaaacttaaaggacccggggaggtatttggccta 1695701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 29987260 - 29987198
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||  |||| ||||||||||    
T  29987260 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggatccatggagatatttggcct 29987198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 5739538 - 5739598
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    |||||||||||| ||||||||||||||| |||||||||||  ||||| |||| ||||||||    
T  5739538 aaacttaaaagatctatctgaaacaaacgtgaaacttaaaagatccggggagatatttggc 5739598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 39834047 - 39833987
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |   |||||||||||||    
T  39834047 aaacttaaaggacctatctgaaacaaacgtgaaacttaaagaacctagggaggtatttggc 39833987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 39834313 - 39834389
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataatttct 79  Q
    |||||||||||| |||||| |||||||| |||||||||||||| ||  |||  |||||| |||||| ||||||||||    
T  39834313 aaacttaaaagatctatctaaaacaaacgtgaaacttaaagaacccagggaaatatttgacctatataataatttct 39834389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 41810994 - 41811050
Alignment:
Q  10 aaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||| |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  41810994 aaagatctatctgaaacaaacatgaaacttaaatgatccgaggagatgtttggccta 41811050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 32712221 - 32712166
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtat 58  Q
    ||||||||| || |||||||||||||||||||||||||||  | ||||||||||||    
T  32712221 aaacttaaaggatctatctgaaacaaacatgaaacttaaaagacccgaggaggtat 32712166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 38823784 - 38823847
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || ||||||||||||||||| |||||||||| | ||| ||||||||||| ||||    
T  38823784 aaacttaaaggatctatctgaaacaaacataaaacttaaaggacccggggaggtatttgaccta 38823847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 45721520 - 45721583
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||  | |||||||| |||||    
T  45721520 aaacttaaaagacatatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttagccta 45721583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 45721186 - 45721128
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    |||||||||||| ||| |||||||||||||||||||||||| | ||| | |||||||||    
T  45721186 aaacttaaaagatctacctgaaacaaacatgaaacttaaaggacccgggaaggtatttg 45721128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 18030250 - 18030185
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    |||||||||||| |||| ||||| | ||||||||||||||| ||||| | | ||||||||||||||    
T  18030250 aaacttaaaagatctatttgaaatagacatgaaacttaaaggatccgggaatgtatttggcctata 18030185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 20492060 - 20492117
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtattt 60  Q
    ||||||||| || |||||||||||||||||||||||||||| ||| ||| || |||||    
T  20492060 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatcggagaagatattt 20492117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 41542729 - 41542782
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtattt 60  Q
    ||||| |||||||||||||||||| ||||| |||||| ||||| ||||||||||    
T  41542729 ttaaatgacctatctgaaacaaacgtgaaatttaaaggatccggggaggtattt 41542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 4765147 - 4765207
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    |||||||||  ||||||||||||||||| |||||||||||| | ||  |||||||||||||    
T  4765147 aaacttaaagaacctatctgaaacaaacgtgaaacttaaaggaccctgggaggtatttggc 4765207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5277349 - 5277309
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  5277349 aaacttaaaagatctatctgaaacaaacaggaaacttaaag 5277309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 29987525 - 29987588
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| ||  |||||||||||||||| |||||||||| | ||| |||||||| |||||||    
T  29987525 aaacttaaaggatttatctgaaacaaacataaaacttaaaggacccggggaggtatatggccta 29987588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 41524654 - 41524607
Alignment:
Q  16 ctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    |||||| |||||||||||||| |||||| |||||| ||||||||||||    
T  41524654 ctatctaaaacaaacatgaaaattaaaggatccgaagaggtatttggc 41524607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 5739431 - 5739373
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| ||| |||||||||||||| |||||||||||| ||||  |||| ||||||    
T  5739431 aaacttaaaggacatatctgaaacaaacgtgaaacttaaaggatccagggagatatttg 5739373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 29386407 - 29386445
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaa 41  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  29386407 aaacttaaatgatctatctgaaacaaacatgaaacttaa 29386445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 4965107 - 4965147
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||| |||||||||||||||||||||    
T  4965107 aaacttaaatgatctatctaaaacaaacatgaaacttaaag 4965147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 15615484 - 15615524
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||||||||||||| ||||||||  |||||||||||    
T  15615484 aaacttaaaagacctatctaaaacaaacgggaaacttaaag 15615524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 20491759 - 20491719
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  20491759 aaacttaaaagatctatccaaaacaaacatgaaacttaaag 20491719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 49113222 - 49113262
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  49113222 aaacttaaaggatctatctgaaataaacatgaaacttaaag 49113262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 60530 - 60460
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    |||||||||  ||||||||||||||||| |||||||||||| | ||  |||||||||||||||||||||||    
T  60530 aaacttaaagtacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcctataaaata 60460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 60770 - 60833
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||| || |||||||||| |  | |||||||||||||||||    
T  60770 aaacttaaatgatctatctgaaacaaatataaaacttaaaggactcaaggaggtatttggccta 60833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 24012558 - 24012624
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataa 69  Q
    ||||||||| || ||||||||||||||| |||||||||||| | ||||| |||||||||||||||||    
T  24012558 aaacttaaaggatctatctgaaacaaacgtgaaacttaaaggacccgagtaggtatttggcctataa 24012624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 9049807 - 9049870
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||| | |||| || ||||||||||||    
T  9049807 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccgaagatgtatttggccta 9049870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7858651 - 7858589
Alignment:
Q  1 tcaaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    ||||||||||| || |||||||||||||||||||||||||||  | ||| |||||||||||||    
T  7858651 tcaaacttaaaggatctatctgaaacaaacatgaaacttaaatgacccggggaggtatttggc 7858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 4799607 - 4799668
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||||||||||||||||||||||||||| |  || ||||||||||||||    
T  4799607 aaacttaaatgatctatctgaaacaaacatgaaacttaaaggaatcggggaggtatttggcc 4799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 29134966 - 29134905
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| || |||||||||||||||||||||||||||| | ||| | |||||||||||||    
T  29134966 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccg-gaaggtatttggcct 29134905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 33041046 - 33041092
Alignment:
Q  2 caaacttaaaagacctatctgaaacaaacatgaaacttaaagaatcc 48  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||    
T  33041046 caaacttaaaggacctatctgaaacaaacgtgaaacttaaaggatcc 33041092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 5985832 - 5985774
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || ||||||||||||||| |||||||||||| | ||  |||||||||||    
T  5985832 aaacttaaaggatctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttg 5985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4799373 - 4799333
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || ||||||||||||||| ||||||||||||    
T  4799373 aaacttaaaggatctatctgaaacaaacgtgaaacttaaag 4799333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 45638116 - 45638050
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataa 69  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||  |||| ||||||||||||||    
T  45638116 aaacttaaaggacctatctgaaacaaacatgaaacttaaaggacccagggagatatttggcctataa 45638050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 11973976 - 11973908
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaa 71  Q
    ||||||||| ||  ||||||||||||||||||||||||||  ||||| |||||||||||||||| ||||    
T  11973976 aaacttaaaggatttatctgaaacaaacatgaaacttaaatgatccggggaggtatttggcctaaaaaa 11973908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36387318 - 36387254
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| || |||||||| |||||||||||||||||| || |||| ||||||||||||||||    
T  36387318 aaacttaaaggatctatctgacacaaacatgaaacttaaaaaacccgaagaggtatttggcctat 36387254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 5482928 - 5482869
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||  |||||||||||    
T  5482928 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccggagaggtatttgg 5482869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 4603797 - 4603855
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||| | |||||||||    
T  4603797 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccgggaaggtatttg 4603855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 5247971 - 5247910
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| ||  |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  5247971 aaacttaaatgatttatctgaaacaaacataaaacttaaaggatccgaggagatatttggcc 5247910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 43865409 - 43865348
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||| | ||||||||||||    
T  43865409 aaacttaaaagatctatctgaaacaaacatgaaatttaaaggacccgggtaggtatttggcc 43865348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 7438491 - 7438554
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||||||||||||| |||||||| |||||||||||| | |||  ||| |||||||||||    
T  7438491 aaacttaaaagacctatctaaaacaaacgtgaaacttaaaggacccggagagatatttggccta 7438554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 30851118 - 30851055
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||| ||||||||||||| | ||| | ||||||||||||||    
T  30851118 aaacttaaaggatctatctgaaacaaatatgaaacttaaaggacccgggaaggtatttggccta 30851055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 34334586 - 34334523
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||||||||||||||||| |  | ||||| |||||||||||    
T  34334586 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggactcaaggagatatttggccta 34334523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 43671235 - 43671177
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||  |||||||||||||||    
T  43671235 ttaaaggacctatttgaaacaaacgtgaaacttaaaggatccagggaggtatttggcct 43671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 45638381 - 45638443
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| || |||||||||||||||||||||||||||| | | | ||| |||||||||||    
T  45638381 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctggggatgtatttggcct 45638443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 5483193 - 5483265
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaa-gaatccgaggaggtatttggcctataaaataat 75  Q
    ||||||||| |||||||||||||||||| ||||||||||| || || || |||||||||| ||||||| |||||    
T  5483193 aaacttaaaggacctatctgaaacaaacgtgaaacttaaaggactcaga-gaggtatttgacctataatataat 5483265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 15286126 - 15286199
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataatt 76  Q
    ||||||||| || |||| ||||||||||||||||||||||| | ||| | | ||||||||||||| || |||||    
T  15286126 aaacttaaaggatctatatgaaacaaacatgaaacttaaagtacccgggaatgtatttggcctattaattaatt 15286199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 35125631 - 35125692
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||| ||||| ||||||||||||||| | ||||| ||||||||||||||    
T  35125631 aaacttaaatgatctatgtgaaataaacatgaaacttaatggatccggggaggtatttggcc 35125692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 1844552 - 1844616
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| || |||||||||| ||||||||||||||||| | ||| | || ||||||||||||    
T  1844552 aaacttaaaggatctatctgaaataaacatgaaacttaaaggacccgtgaagatatttggcctat 1844616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 11974212 - 11974252
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  11974212 aaacttaaaagacatatctgaaacaaacgtgaaacttaaag 11974252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 28182446 - 28182486
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  28182446 aaacttaaaggacctatctgaaacaaacgtgaaacttaaag 28182486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 28582438 - 28582370
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaa 71  Q
    |||| |||| |||| ||||||||||||| |||||||||||| | |  |||||||||||||||| |||||    
T  28582438 aaacgtaaaggacccatctgaaacaaacgtgaaacttaaaggacctaaggaggtatttggcctttaaaa 28582370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 1039207 - 1039266
Alignment:
Q  17 tatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataatt 76  Q
    |||||||||||||| |||||||||||| | ||  |||||||||||||||| |||| ||||    
T  1039207 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcctaaaaaaaaatt 1039266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 7881983 - 7882046
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||| ||||| ||||||||||| |  || ||||||||||||||||    
T  7881983 aaacttaaatgatctatctgaaaaaaacacgaaacttaaaggactcggggaggtatttggccta 7882046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 15285850 - 15285787
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||| | |||||||||||||||||| |||||||||||| | |||  |||||||||| ||||    
T  15285850 aaacttacatgacctatctgaaacaaacctgaaacttaaaggacccggagaggtatttgaccta 15285787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 35125398 - 35125335
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| |||| ||||||||||||||| |||||||||| | ||  ||||||||||| ||||    
T  35125398 aaacttaaaggaccgatctgaaacaaacattaaacttaaaggacccagggaggtatttgtccta 35125335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 15787043 - 15787101
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||| |||||||||||||||| |||||| | ||| |||||||||||    
T  15787043 aaacttaaaggatctatttgaaacaaacatgaaatttaaaggacccggggaggtatttg 15787101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 28238488 - 28238450
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaa 41  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  28238488 aaacttaaaggacctatctgaaacaaacgtgaaacttaa 28238450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 29683633 - 29683579
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggta 57  Q
    |||||||||  ||||||||||||||||| ||||| |||||| |||| ||||||||    
T  29683633 aaacttaaagaacctatctgaaacaaacgtgaaatttaaaggatcctaggaggta 29683579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 42553747 - 42553809
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| |||||||||||||||||  |||||||||||| |  |  |||||||||||||||    
T  42553747 aaacttaaatgacctatctgaaacaaatgtgaaacttaaaggacacctggaggtatttggcct 42553809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 44436475 - 44436414
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||||||||| |||||||||| |||||| | ||| | ||||||||||||    
T  44436475 aaacttaaaggatctatctgaaaaaaacatgaaatttaaaggacccgggaaggtatttggcc 44436414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 1038928 - 1038872
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatt 59  Q
    ||||||||| || |||||||||| |||| |||||||||||||| | || ||||||||    
T  1038928 aaacttaaaggatctatctgaaataaacgtgaaacttaaagaacctgaagaggtatt 1038872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4603503 - 4603463
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  4603503 aaacttaaaggacctatccgaaacaaacgtgaaacttaaag 4603463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 28238828 - 28238860
Alignment:
Q  10 aaagacctatctgaaacaaacatgaaacttaaa 42  Q
    ||||| |||||||||||||||||||||||||||    
T  28238828 aaagatctatctgaaacaaacatgaaacttaaa 28238860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 29683885 - 29683925
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  29683885 aaacttaaaggacctatctgaaacaaactcgaaacttaaag 29683925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 43671299 - 43671259
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||||||||| |||||||||  |||||||||||    
T  43671299 aaacttaaaagacctatccgaaacaaactcgaaacttaaag 43671259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 3173279 - 3173218
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcc 64  Q
    ||||||||| || |||||||||||||||||||||||||||| | |||| |||||||||||||    
T  3173279 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccgatgaggtatttggcc 3173218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 46855318 - 46855383
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctata 68  Q
    ||||||||| || ||||||||||||||||| |||||||||| | ||| ||||||||||||||||||    
T  46855318 aaacttaaaggatctatctgaaacaaacataaaacttaaaggacccggggaggtatttggcctata 46855383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 42758998 - 42758935
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    |||||||||||| |||||||||||| ||||||||||||||| | ||  ||||||||||||||||    
T  42758998 aaacttaaaagatctatctgaaacatacatgaaacttaaaggacccagggaggtatttggccta 42758935  T

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Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 48840298 - 48840360
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcct 65  Q
    ||||||||| || |||||||||||||||||||||||||||| | | ||| |||||||||||||    
T  48840298 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctgagaaggtatttggcct 48840360  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 42430679 - 42430739
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggc 63  Q
    ||||||||| || |||||||||||||||||||||||||||| | ||| ||||| |||||||    
T  42430679 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccggggaggaatttggc 42430739  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 18942617 - 18942676
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||| ||  ||||||||||||||||||||||||||| |||||  |||||||||||    
T  18942617 aaacttaaaggatttatctgaaacaaacatgaaacttaaaggatccggagaggtatttgg 18942676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 44449054 - 44448991
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || ||||||||||||||||||||| |||||| | ||| |||| |||||||||||    
T  44449054 aaacttaaaggatctatctgaaacaaacatgaaatttaaaggacccggggagatatttggccta 44448991  T

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Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 45909993 - 45910056
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggccta 66  Q
    ||||||||| || |||||||||||||| ||||||||| ||| |||||  |||||||||||||||    
T  45909993 aaacttaaaggatctatctgaaacaaatatgaaacttgaaggatccggagaggtatttggccta 45910056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 47193558 - 47193628
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    |||||||||||| |||||| ||||| ||||||||||||||| || |  |||||||||||||| ||| ||||    
T  47193558 aaacttaaaagatctatctaaaacatacatgaaacttaaaggattcatggaggtatttggccaatataata 47193628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 8919606 - 8919566
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  8919606 aaacttaaaagacctatccgaaacaaacttgaaacttaaag 8919566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 18942352 - 18942312
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  18942352 aaacttaaaggatctatctgaaacaaacatgaaacttaaag 18942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 36987088 - 36987148
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||| || |||||||||||||||||||||||||||| | | | | |||||||||||||||    
T  36987088 ttaaaggatctatctgaaacaaacatgaaacttaaaggacctgtgaaggtatttggcctat 36987148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 45443436 - 45443500
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| ||||||||| |||||||| |||||||||||| | ||  ||| |||||||||||||    
T  45443436 aaacttaaaggacctatctaaaacaaacgtgaaacttaaaggacccagggaagtatttggcctat 45443500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 48840061 - 48839994
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataat 75  Q
    ||||| |||||||||||||||||| |||||||||||| | |   |||||||||||||||| ||||||||    
T  48840061 ttaaaggacctatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggccta-aaaataat 48839994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 22564026 - 22564097
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataa 74  Q
    ||||||||| |||||||||||||||||| | |||||||||| |  |  |||||||||||||||  |||||||    
T  22564026 aaacttaaaggacctatctgaaacaaacgttaaacttaaaggactcagggaggtatttggccttaaaaataa 22564097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 35127495 - 35127436
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||| || ||||||||||||||||||||||||| || || ||  |||||||||||    
T  35127495 aaacttaaaggatctatctgaaacaaacatgaaacttagaggattcggagaggtatttgg 35127436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 37043371 - 37043434
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaa 70  Q
    |||||||| |||||||||||||| ||||||||||||| | ||   ||||||||||||| |||||    
T  37043371 ttaaaagatctatctgaaacaaatatgaaacttaaaggacccagagaggtatttggccgataaa 37043434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 42759263 - 42759322
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    ||||||||||||||||| ||||| |||| |||||||||||| | ||  ||||||||||||    
T  42759263 aaacttaaaagacctatatgaaataaacgtgaaacttaaaggacccagggaggtatttgg 42759322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22641951 - 22641893
Alignment:
Q  4 aacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttgg 62  Q
    |||||||| ||  ||||||||||||||||||||| ||||| || || ||||||||||||    
T  22641951 aacttaaaggatgtatctgaaacaaacatgaaacataaaggattcggggaggtatttgg 22641893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 37393375 - 37393305
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaata 73  Q
    ||||||| | || |||||||||||||||||||||||||||| | ||  | ||||||||||| || ||||||    
T  37393375 aaacttagaggatctatctgaaacaaacatgaaacttaaaggaccccggaaggtatttggcataaaaaata 37393305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 10097121 - 10097080
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaaga 44  Q
    ||||||||| ||||||||||||| |||| |||||||||||||    
T  10097121 aaacttaaaggacctatctgaaataaacttgaaacttaaaga 10097080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 45324616 - 45324559
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtattt 60  Q
    ||||||||| ||| |||||||||||||| | |||||||||| | || |||||||||||    
T  45324616 aaacttaaacgacatatctgaaacaaacgtaaaacttaaaggacccaaggaggtattt 45324559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 6723516 - 6723584
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaa 71  Q
    ||||||||  || ||||||||||||||||| |||||||||| | |||  |||||||||| |||| ||||    
T  6723516 aaacttaacggatctatctgaaacaaacataaaacttaaaggacccggagaggtatttgacctaaaaaa 6723584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 8919782 - 8919822
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    |||||||||||| |||||||||| ||| |||||||||||||    
T  8919782 aaacttaaaagatctatctgaaataaatatgaaacttaaag 8919822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9907531 - 9907467
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctat 67  Q
    ||||||||| |||||||||||||||||| | |||||||||  | ||  |||| ||||||||||||    
T  9907531 aaacttaaaggacctatctgaaacaaacgttaaacttaaatgacccagggagttatttggcctat 9907467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 10470843 - 10470879
Alignment:
Q  7 ttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  10470843 ttaaaggacctatctgaaacaaacgtgaaacttaaag 10470879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 38995271 - 38995343
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaataat 75  Q
    ||||||||| |||||| || |||||||  | |||||||||| ||||   ||||||||||||||| ||||||||    
T  38995271 aaacttaaaggacctaactaaaacaaatgttaaacttaaaggatccagagaggtatttggcctaaaaaataat 38995343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 41718062 - 41718026
Alignment:
Q  9 aaaagacctatctgaaacaaacatgaaacttaaagaa 45  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  41718062 aaaagatctatctgaaacaaacatgatacttaaagaa 41718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 42759058 - 42759018
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  42759058 aaacttaaatgacctatctgaaacaaactcgaaacttaaag 42759018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 45324840 - 45324872
Alignment:
Q  13 gacctatctgaaacaaacatgaaacttaaagaa 45  Q
    |||||||||||||||||| ||||||||||||||    
T  45324840 gacctatctgaaacaaacttgaaacttaaagaa 45324872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 45324890 - 45324930
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  45324890 aaacttaaaggacctatctgaaacaaactcgaaacttaaag 45324930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 11772 - 11704
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttggcctataaaa 71  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||   ||||||||||||||| ||||    
T  11772 aaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagtgaggtatttggcctagaaaa 11704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 23710 - 23652
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtatttg 61  Q
    ||||||||| || |||||| ||||||||||||||||||||| ||| || ||||||||||    
T  23710 aaacttaaatgatctatctaaaacaaacatgaaacttaaaggatctgatgaggtatttg 23652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 202336 - 202279
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaagaatccgaggaggtattt 60  Q
    ||||||||| || |||| ||||||||||||||||||||||| | ||| ||||||||||    
T  202336 aaacttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggaggtattt 202279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 21871 - 21831
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  21871 aaacttaaaggacctatccgaaacaaacgtgaaacttaaag 21831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 22253 - 22213
Alignment:
Q  3 aaacttaaaagacctatctgaaacaaacatgaaacttaaag 43  Q
    ||||||||| || |||||||||||||| |||||||||||||    
T  22253 aaacttaaaggatctatctgaaacaaatatgaaacttaaag 22213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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