View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8651_high_1 (Length: 566)
Name: NF8651_high_1
Description: NF8651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8651_high_1 |
 |  |
|
| [»] scaffold0933 (1 HSPs) |
 |  |  |
|
| [»] scaffold1939 (1 HSPs) |
 |  |  |
|
| [»] scaffold0570 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-138; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 139 - 415
Target Start/End: Complemental strand, 14507235 - 14506958
Alignment:
| Q |
139 |
ttgacccatacagaaagaaaagacaagtagtggtatttattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtaga |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14507235 |
ttgacccatacagaaagaaaagacaagtagtggtatttattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtaga |
14507136 |
T |
 |
| Q |
239 |
ggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaattaag |
338 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14507135 |
gtagcaattctctagttgctagttcacagtatttagcatactttccctctcttgtataaatatcattgtactgtactcttttcatctaatgagaattaag |
14507036 |
T |
 |
| Q |
339 |
agtttcattcatttctct-ctagtcataatatggtatcagatttctctctcttgagagagaagttccgatcctaaccg |
415 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14507035 |
agtttcattcatttctctccaagtcataatatggtatcagatttctctctcatgagagagaagttccgatcctaaccg |
14506958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 14506893 - 14506816
Alignment:
| Q |
480 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtcacaatcggtgatgtccatctc |
557 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
14506893 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtttcaatcggtgattttcatctc |
14506816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 14484625 - 14484575
Alignment:
| Q |
21 |
tttgatagcattgtgatataaattggggaccgtatggacactcatatacaa |
71 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14484625 |
tttgatagcattgtgatataaattggggaccgtatggacactcacatacaa |
14484575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 14484506 - 14484470
Alignment:
| Q |
139 |
ttgacccatacagaaagaaaagacaagtagtggtatt |
175 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
14484506 |
ttgaccaatacaaaaagaaaagacaagtagtggtatt |
14484470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 176 - 413
Target Start/End: Complemental strand, 28522277 - 28522047
Alignment:
| Q |
176 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtagaggagcaattctctagttgctagttcacagtacttagc |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28522277 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtagagtagcaattctctagtttctagttcacagtacttagc |
28522178 |
T |
 |
| Q |
276 |
atactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaattaagagtttcattcatttctctctagtcataatatggtatc |
375 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
28522177 |
atactttccctcatttgtataaatatcattgtactgcactcttttcatctaatgagaattaagagtttcattcatttc-------tcataatatggtatc |
28522085 |
T |
 |
| Q |
376 |
agatttctctctcttgagagagaagttccgatcctaac |
413 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28522084 |
agatttctctctcatgagagagaagttccgatcctaac |
28522047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 28294646 - 28294795
Alignment:
| Q |
176 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtagaggagcaattctctagttgctagttcacagtacttagc |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28294646 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatctagtagagtagcaattctctagttgctagttcacagtacttagc |
28294745 |
T |
 |
| Q |
276 |
atactttccctctcttgtataaatatcattgtactgcactcttttcatct |
325 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28294746 |
atactttccctctattgtataaatatcattgtactacactcttttcatct |
28294795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 176 - 325
Target Start/End: Complemental strand, 28517427 - 28517278
Alignment:
| Q |
176 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtagaggagcaattctctagttgctagttcacagtacttagc |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28517427 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatctagtagagtagcaattctctagttgctagttcacagtacttagc |
28517328 |
T |
 |
| Q |
276 |
atactttccctctcttgtataaatatcattgtactgcactcttttcatct |
325 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28517327 |
atactttccctctattgtataaatatcattgtactacactcttttcatct |
28517278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 557
Target Start/End: Complemental strand, 28522002 - 28521951
Alignment:
| Q |
506 |
ctctttgcttctctacttcctctttcttgtcacaatcggtgatgtccatctc |
557 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||| | |||||| |
|
|
| T |
28522002 |
ctctttgcttctctacttcctttttcttgtttcaatcggtgattttcatctc |
28521951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 157; Significance: 3e-83; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 176 - 368
Target Start/End: Complemental strand, 19409963 - 19409771
Alignment:
| Q |
176 |
tattacattttatgttttagctttactattagagataacttgtggagcaagttatccagtagaggagcaattctctagttgctagttcacagtacttagc |
275 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
19409963 |
tattacattttatgttttagctttattataagagataacttgtggagcaagttatccagtagagtagcaattctctagtttctagttcacggtacttagc |
19409864 |
T |
 |
| Q |
276 |
atactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaattaagagtttcattcatttctctctagtcataata |
368 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19409863 |
atactttccctcacttgtataaatatcattgtactgcactcttttcatcctatgagaattaagagtttcattcatttctctctaatcataata |
19409771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 235 - 415
Target Start/End: Original strand, 42133564 - 42133745
Alignment:
| Q |
235 |
tagaggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaat |
334 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | |||||||||| |
|
|
| T |
42133564 |
tagagtagcaattctctagctgctagttcacagtacttagcatactttccctcttttgtataaataccattgtactgtactcttttgagataatgagaat |
42133663 |
T |
 |
| Q |
335 |
taagagtttcattcatttctct-ctagtcataatatggtatcagatttctctctcttgagagagaagttccgatcctaaccg |
415 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
42133664 |
taagagtttcattcatttctctccaagtcataatatggtatcagatttctctctcatgagagagaagttccgatcctaaccg |
42133745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 480 - 546
Target Start/End: Original strand, 42133810 - 42133875
Alignment:
| Q |
480 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtcacaatcggtg |
546 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
42133810 |
caccattgttacttgcagaagctctt-tctttgcttctttacttcctctttcttgtttcaatcggtg |
42133875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 548
Target Start/End: Complemental strand, 23968379 - 23968312
Alignment:
| Q |
480 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtcacaatcggtgat |
548 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||| ||||| ||||| |
|
|
| T |
23968379 |
caccattgttacttgcagaagcttttctatttgcttctctgcttcct-tttcttgtttcaatcagtgat |
23968312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 23968480 - 23968444
Alignment:
| Q |
379 |
tttctctctcttgagagagaagttccgatcctaaccg |
415 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||| |
|
|
| T |
23968480 |
tttctctctcatgtgagagaagttccgatcctaaccg |
23968444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 142; Significance: 3e-74; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 235 - 415
Target Start/End: Complemental strand, 18484204 - 18484023
Alignment:
| Q |
235 |
tagaggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaat |
334 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | |||||||||| |
|
|
| T |
18484204 |
tagagtagcaattctctagttgctagttcacagtacttagcatactttccctcttttgtataaataccattgtactgtactcttttgacataatgagaat |
18484105 |
T |
 |
| Q |
335 |
taagagtttcattcatttctctct-agtcataatatggtatcagatttctctctcttgagagagaagttccgatcctaaccg |
415 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18484104 |
taagagtttcattcatttctctctaagtcataatatggtatcagatttctctctcatgagagagaagttccgatcctaaccg |
18484023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 235 - 368
Target Start/End: Complemental strand, 18479370 - 18479236
Alignment:
| Q |
235 |
tagaggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaat |
334 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||| | |||||||||| |
|
|
| T |
18479370 |
tagagtagcaattctctagttgctagttcacagtacttagcatacttttcctcttttgtataaataccattgtactgtactcttttgacataatgagaat |
18479271 |
T |
 |
| Q |
335 |
taagagtttcattcatttctctct-agtcataata |
368 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |
|
|
| T |
18479270 |
taagagtttcattcatttctctctaagtcataata |
18479236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 480 - 548
Target Start/End: Complemental strand, 18483958 - 18483890
Alignment:
| Q |
480 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtcacaatcggtgat |
548 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18483958 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtttcaatcggtgat |
18483890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 336 - 415
Target Start/End: Complemental strand, 38849774 - 38849694
Alignment:
| Q |
336 |
aagagtttcattcattt-ctctctagtcataatatggtatcagatttctctctcttgagagagaagttccgatcctaaccg |
415 |
Q |
| |
|
||||| ||||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
38849774 |
aagagattcattcattttctctcttctgataatatggtatcagatttctctctcatgagagagaagttccgatcctaaccg |
38849694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 38849629 - 38849552
Alignment:
| Q |
480 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtcacaatcggtgatgtccatctc |
557 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| |||| |||||| | |||||| |
|
|
| T |
38849629 |
caccattgttacttgtagaagctcttctctttgcttctctacattctctttcttgtttcaattggtgattttcatctc |
38849552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 368
Target Start/End: Complemental strand, 24280299 - 24280256
Alignment:
| Q |
326 |
aatgagaattaagagtttcattcatttctctct-agtcataata |
368 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24280299 |
aatgagaattaagagtttcattcatttctctctaagtcataata |
24280256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 138; Significance: 7e-72; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 235 - 415
Target Start/End: Complemental strand, 21032172 - 21031991
Alignment:
| Q |
235 |
tagaggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaat |
334 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||| |
|
|
| T |
21032172 |
tagagtagcaattctctagttgctagttcacagtacttagcatactttccctcttttgtataaataccattgtactgtactcttttcagataatgagaat |
21032073 |
T |
 |
| Q |
335 |
taagagtttcattcatttctctct-agtcataatatggtatcagatttctctctcttgagagagaagttccgatcctaaccg |
415 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
21032072 |
taagagtttcattcatttctctctaagtcatattatggtatcagatttctctctcatgagagagaagttccgattctaaccg |
21031991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 235 - 359
Target Start/End: Original strand, 19873841 - 19873965
Alignment:
| Q |
235 |
tagaggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcatctaatgagaat |
334 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | |||||||||| |
|
|
| T |
19873841 |
tagagtagcaattctctagttgctagttcacagtacttagcatactttccctcttttgtataaataccattgtactgtactctttttagataatgagaat |
19873940 |
T |
 |
| Q |
335 |
taagagtttcattcatttctctcta |
359 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
19873941 |
taagagtttcattcatttctctcta |
19873965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 21031932 - 21031855
Alignment:
| Q |
480 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtcacaatcggtgatgtccatctc |
557 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
21031932 |
caccattgttacttgcagaagctcttctctttgcttctctacttcctctttcttgtttcaatcggtgattttcatctc |
21031855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0933 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0933
Description:
Target: scaffold0933; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 241 - 359
Target Start/End: Original strand, 3897 - 4018
Alignment:
| Q |
241 |
agcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgtactgcactcttttcat---ctaatgagaattaa |
337 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||| ||||||||||| |||||||||||| |
|
|
| T |
3897 |
agcaattctctagttgctagttcacagtaattagcatactttccctcttttatataaataccattgtactgtactcttttcataacaaaatgagaattaa |
3996 |
T |
 |
| Q |
338 |
gagtttcattcatttctctcta |
359 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
3997 |
gagtttcattcatttctctcta |
4018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1939 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1939
Description:
Target: scaffold1939; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 1150 - 1223
Alignment:
| Q |
235 |
tagaggagcaattctctagttgctagttcacagtacttagcatactttccctctcttgtataaatatcattgta |
308 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
1150 |
tagagtagcaattctctagctgctagttcacagtacttagcatactttccctcttttgtataaataccattgta |
1223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0570
Description:
Target: scaffold0570; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 2959 - 3009
Alignment:
| Q |
318 |
tttcatctaatgagaattaagagtttcattcatttctctctagtcataata |
368 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
2959 |
tttcatctaatgagaattaagagattcattcatttctctctagttataata |
3009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 17483078 - 17483017
Alignment:
| Q |
352 |
tctctctagtcataatatggtatcagatttctctctcttgagagagaagttccgatcctaac |
413 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
17483078 |
tctctctagtgataatatggtattagatttctctctcccgtgagagaagttttgatcctaac |
17483017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University