View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8651_low_16 (Length: 283)
Name: NF8651_low_16
Description: NF8651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8651_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 30723134 - 30722879
Alignment:
| Q |
19 |
gctccagaatacacggggacgtcataagtatcttattttcaacctttctaaataaagaaatttgatttgatttgatgaaatatatagctgtgttgacttc |
118 |
Q |
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| T |
30723134 |
gctccagaatacacggggacgccataagtatcttattttcaacctttctaaataaagaaatttgatttgatttgatgaaatatatagctgtgttgacttc |
30723035 |
T |
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| Q |
119 |
atgctctttctagtttgctgatatatatagaaacaatattatgttgttttgatctaactcaaaagtcaaaacaatatattttctcttcctaattttcaat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30723034 |
atgctctttctagtttgctgatatatatagaaacaatattatgttgttttgatctaactcaaaagtcaaaacaatatattttctcttcctaattttcaat |
30722935 |
T |
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| Q |
219 |
aattcttgatcttttannnnnnnngaacatctcatatattgataaaagagaataat |
274 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
30722934 |
aattcttgatcttttattttttttgaacatctcatatattgataaaagagaataat |
30722879 |
T |
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