View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8651_low_18 (Length: 277)
Name: NF8651_low_18
Description: NF8651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8651_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 25691179 - 25691420
Alignment:
| Q |
11 |
ggacatcatggtaagggtagtgatgggaatggtaagaatgaggttgttaatggtgtagggtggtccagagggttctattctgcgcatgctccttatccta |
110 |
Q |
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| T |
25691179 |
ggacatcatggtaagggtagtgatgggaatggtaagaatgaggttgttaatggtgtagggtggtccagagggttctattctgcgcatgttccttatccta |
25691278 |
T |
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| Q |
111 |
cgcatcatcatcaagtcttgccataccaacatgatcaatgtcttcatgcaggtcttaatatctcttcaatgctatctcatcttattttttgcattcacat |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25691279 |
cgcatcatcatcaagtcttgccataccaacatgatcaatgtcttcatgcaggtcttaatatctcttcaatgctatctcatcttattttttgcattcacat |
25691378 |
T |
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| Q |
211 |
tataatcaaacaagtaaacaactacaagtactaaccatccct |
252 |
Q |
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| T |
25691379 |
tataatcaagcaagtaaacagctacaagtaataaccatccct |
25691420 |
T |
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