View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8651_low_28 (Length: 236)
Name: NF8651_low_28
Description: NF8651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8651_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 50455188 - 50455411
Alignment:
| Q |
1 |
ttcatgcatctccacttgtaccgccaaattcttgcaaatcaaagcacagcaaatccagtgatttccattttcgcaaaagatcgatttctcttttatactt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50455188 |
ttcatgcatctccacttgtaccgccaaattcttgcaaatcaaagcacagcaaatctagtgatttccattttcgcaaaagatcgatttctcttttatactt |
50455287 |
T |
|
| Q |
101 |
gaatgaaaattgtaaggccatatcagaaaaatggtataagtaacctctttcctaataaattatgtgtatggtgtaaaaagtataatataaagggtaaacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
50455288 |
gaatgaaaattgtaaggccatatcagaaaaatggtataagtaacctctttcctaataaattatgtgtatggtgtaaaaagtataatataaagggttaacc |
50455387 |
T |
|
| Q |
201 |
atatttgtttgacttgttgttttt |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
50455388 |
atatttgtttgacttgttgttttt |
50455411 |
T |
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