View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8651_low_5 (Length: 565)

Name: NF8651_low_5
Description: NF8651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8651_low_5
NF8651_low_5
[»] chr2 (79 HSPs)
chr2 (237-550)||(24621693-24622018)
chr2 (237-550)||(24622012-24622337)
chr2 (237-550)||(24622899-24623224)
chr2 (237-550)||(24624414-24624739)
chr2 (237-550)||(24625336-24625661)
chr2 (237-550)||(24626909-24627234)
chr2 (237-550)||(24632282-24632607)
chr2 (237-550)||(24633488-24633813)
chr2 (237-550)||(24634091-24634416)
chr2 (237-550)||(24638773-24639098)
chr2 (237-550)||(24623502-24623827)
chr2 (237-550)||(24625017-24625342)
chr2 (237-550)||(24633169-24633494)
chr2 (237-550)||(24631395-24631720)
chr2 (237-550)||(24638454-24638779)
chr2 (237-550)||(24626298-24626627)
chr2 (237-550)||(24620760-24621088)
chr2 (237-550)||(24621082-24621411)
chr2 (237-550)||(24625655-24625984)
chr2 (237-550)||(24636266-24636595)
chr2 (237-550)||(24637514-24637843)
chr2 (237-550)||(24639764-24640093)
chr2 (237-550)||(24639441-24639770)
chr2 (237-550)||(24625978-24626304)
chr2 (237-543)||(24635565-24635887)
chr2 (237-550)||(24636589-24636918)
chr2 (237-550)||(24635242-24635571)
chr2 (237-535)||(24637837-24638150)
chr2 (237-455)||(24622331-24622562)
chr2 (237-455)||(24622615-24622846)
chr2 (237-455)||(24631998-24632229)
chr2 (237-455)||(24632601-24632832)
chr2 (237-455)||(24632885-24633116)
chr2 (237-455)||(24633807-24634038)
chr2 (237-455)||(24623218-24623449)
chr2 (237-455)||(24627228-24627459)
chr2 (237-455)||(24631111-24631342)
chr2 (237-415)||(24634694-24634871)
chr2 (237-455)||(24624733-24624964)
chr2 (237-455)||(24634410-24634641)
chr2 (237-455)||(24631714-24631945)
chr2 (237-455)||(24623821-24624051)
chr2 (237-455)||(24621405-24621640)
chr2 (237-455)||(24626621-24626856)
chr2 (237-410)||(24639092-24639263)
chr2 (316-550)||(24637274-24637520)
chr2 (237-393)||(24627512-24627668)
chr2 (237-410)||(24636912-24637088)
chr2 (237-394)||(24640087-24640248)
chr2 (267-455)||(24630857-24631058)
chr2 (338-550)||(24635024-24635248)
chr2 (334-550)||(24636046-24636272)
chr2 (237-356)||(3348060-3348179)
chr2 (423-550)||(24638334-24638460)
chr2 (417-550)||(24619487-24619618)
chr2 (417-550)||(24620635-24620766)
chr2 (307-455)||(24624201-24624361)
chr2 (237-320)||(24619612-24619698)
chr2 (477-550)||(24639375-24639447)
chr2 (492-550)||(24621641-24621699)
chr2 (492-550)||(24622563-24622621)
chr2 (492-550)||(24622847-24622905)
chr2 (492-550)||(24623450-24623508)
chr2 (492-550)||(24624362-24624420)
chr2 (492-550)||(24624965-24625023)
chr2 (492-550)||(24626857-24626915)
chr2 (492-550)||(24627460-24627518)
chr2 (492-550)||(24631059-24631117)
chr2 (492-550)||(24631343-24631401)
chr2 (492-550)||(24631946-24632004)
chr2 (492-550)||(24632230-24632288)
chr2 (492-550)||(24632833-24632891)
chr2 (492-550)||(24633117-24633175)
chr2 (492-550)||(24634039-24634097)
chr2 (492-550)||(24634642-24634700)
chr2 (492-542)||(24624052-24624100)
chr2 (417-449)||(24634887-24634919)
chr2 (231-308)||(32352335-32352412)
chr2 (261-326)||(38802330-38802395)
[»] chr6 (6 HSPs)
chr6 (237-550)||(16477086-16477408)
chr6 (1-296)||(1786660-1786957)
chr6 (296-505)||(16476715-16476936)
chr6 (231-334)||(18860011-18860114)
chr6 (231-356)||(15052287-15052412)
chr6 (495-550)||(16477037-16477092)
[»] chr5 (5 HSPs)
chr5 (237-550)||(21825502-21825824)
chr5 (385-550)||(21825818-21825992)
chr5 (236-356)||(25904730-25904850)
chr5 (267-356)||(3153513-3153603)
chr5 (331-390)||(21827423-21827482)
[»] chr4 (53 HSPs)
chr4 (225-385)||(12177328-12177488)
chr4 (227-383)||(12182047-12182203)
chr4 (292-415)||(52268734-52268857)
chr4 (227-385)||(12172765-12172923)
chr4 (227-385)||(12174115-12174273)
chr4 (227-385)||(12174781-12174939)
chr4 (227-385)||(12180473-12180631)
chr4 (227-385)||(12183950-12184108)
chr4 (225-385)||(12189283-12189443)
chr4 (225-385)||(12184954-12185114)
chr4 (225-385)||(12185298-12185458)
chr4 (225-385)||(12186946-12187106)
chr4 (227-385)||(12178567-12178725)
chr4 (227-385)||(12180811-12180969)
chr4 (225-385)||(12187290-12187450)
chr4 (227-358)||(12175124-12175254)
chr4 (234-385)||(12188949-12189100)
chr4 (227-385)||(12170057-12170215)
chr4 (227-385)||(12173774-12173932)
chr4 (235-385)||(12182722-12182872)
chr4 (225-385)||(12186603-12186763)
chr4 (225-385)||(12188597-12188757)
chr4 (227-358)||(12179234-12179365)
chr4 (227-354)||(12184614-12184741)
chr4 (227-385)||(12173433-12173591)
chr4 (233-385)||(12169474-12169626)
chr4 (243-385)||(12170367-12170509)
chr4 (244-385)||(12169779-12169920)
chr4 (225-385)||(12176985-12177146)
chr4 (243-385)||(12170661-12170803)
chr4 (263-358)||(12186297-12186392)
chr4 (263-358)||(12188291-12188386)
chr4 (225-300)||(12189627-12189702)
chr4 (225-349)||(12170987-12171111)
chr4 (238-353)||(4374979-4375094)
chr4 (225-296)||(12178908-12178979)
chr4 (225-296)||(12184292-12184363)
chr4 (225-298)||(12172438-12172511)
chr4 (225-296)||(12182388-12182459)
chr4 (225-290)||(12169151-12169216)
chr4 (225-298)||(12173104-12173177)
chr4 (225-298)||(12174454-12174527)
chr4 (297-385)||(19156169-19156257)
chr4 (317-385)||(12172512-12172580)
chr4 (225-266)||(12185641-12185682)
chr4 (225-266)||(12187633-12187674)
chr4 (229-266)||(17817943-17817980)
chr4 (225-270)||(19156126-19156171)
chr4 (317-385)||(12174528-12174596)
chr4 (317-385)||(12178982-12179050)
chr4 (317-385)||(12182462-12182530)
chr4 (317-385)||(12184366-12184434)
chr4 (237-285)||(22377496-22377543)
[»] scaffold1024 (1 HSPs)
scaffold1024 (237-348)||(1-112)
[»] chr3 (4 HSPs)
chr3 (245-360)||(16990029-16990144)
chr3 (239-356)||(3732646-3732763)
chr3 (237-299)||(14903155-14903217)
chr3 (241-308)||(30729418-30729485)
[»] chr1 (3 HSPs)
chr1 (241-322)||(2557869-2557949)
chr1 (238-350)||(37857140-37857251)
chr1 (239-274)||(12891610-12891645)
[»] chr7 (8 HSPs)
chr7 (261-355)||(44836703-44836797)
chr7 (295-355)||(38737326-38737386)
chr7 (295-355)||(38737387-38737447)
chr7 (306-356)||(44174763-44174813)
chr7 (293-354)||(31261059-31261120)
chr7 (237-301)||(3669586-3669649)
chr7 (268-328)||(8874195-8874255)
chr7 (226-278)||(42435297-42435349)
[»] chr8 (8 HSPs)
chr8 (239-348)||(24724671-24724780)
chr8 (225-358)||(38136613-38136746)
chr8 (225-289)||(13642504-13642566)
chr8 (242-289)||(13742916-13742963)
chr8 (237-288)||(15246337-15246388)
chr8 (237-295)||(10814333-10814391)
chr8 (225-270)||(36249414-36249459)
chr8 (233-262)||(38580338-38580367)
[»] scaffold0050 (1 HSPs)
scaffold0050 (237-358)||(65163-65284)
[»] scaffold0017 (1 HSPs)
scaffold0017 (233-307)||(31311-31384)


Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24621693 - 24622018
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24621693 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24621792  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24621793 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24621891  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24621892 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24621990  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24621991 gaacacgaaattttggcaaaaagaggtg 24622018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24622012 - 24622337
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24622012 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24622111  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24622112 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24622210  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24622211 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24622309  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24622310 gaacacgaaattttggcaaaaagaggtg 24622337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24622899 - 24623224
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24622899 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24622998  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24622999 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24623097  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24623098 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24623196  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24623197 gaacacgaaattttggcaaaaagaggtg 24623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24624414 - 24624739
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24624414 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24624513  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24624514 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24624612  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24624613 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24624711  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24624712 gaacacgaaattttggcaaaaagaggtg 24624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24625336 - 24625661
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24625336 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24625435  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24625436 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24625534  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24625535 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24625633  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24625634 gaacacgaaattttggcaaaaagaggtg 24625661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24626909 - 24627234
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24626909 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24627008  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24627009 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24627107  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24627108 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24627206  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24627207 gaacacgaaattttggcaaaaagaggtg 24627234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24632282 - 24632607
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24632282 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24632381  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24632382 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24632480  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24632481 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24632579  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24632580 gaacacgaaattttggcaaaaagaggtg 24632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24633488 - 24633813
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24633488 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24633587  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24633588 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24633686  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24633687 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24633785  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24633786 gaacacgaaattttggcaaaaagaggtg 24633813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24634091 - 24634416
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24634091 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24634190  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24634191 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24634289  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24634290 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24634388  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24634389 gaacacgaaattttggcaaaaagaggtg 24634416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24638773 - 24639098
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24638773 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24638872  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24638873 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24638971  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24638972 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24639070  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24639071 gaacacgaaattttggcaaaaagaggtg 24639098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24623502 - 24623827
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24623502 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24623601  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24623602 gtgctggtatgatcgcacctnagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24623700  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24623701 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24623799  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24623800 gaacacgaaattttggcaaaaagaggtg 24623827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24625017 - 24625342
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24625017 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24625116  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24625117 gtgctggtatgatcgcacntgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24625215  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24625216 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24625314  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24625315 gaacacgaaattttggcaaaaagaggtg 24625342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24633169 - 24633494
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24633169 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24633268  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24633269 gtgctggtatgatcgcacctnagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24633367  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24633368 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24633466  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24633467 gaacacgaaattttggcaaaaagaggtg 24633494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24631395 - 24631720
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24631395 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24631494  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24631495 gtgctggtatgatcgcaccttagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24631593  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24631594 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24631692  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24631693 gaacacgaaattttggcaaaaagaggtg 24631720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24638454 - 24638779
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24638454 agaggtgcaacacaaggacttcccaggaggtcacccatcctagcactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24638553  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24638554 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24638652  T
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24638653 actaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24638751  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24638752 gaacacgaaattttggcaaaaagaggtg 24638779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24626298 - 24626627
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggcc----aagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||| ||    
T  24626298 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24626397  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24626398 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24626496  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24626497 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24626595  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24626596 aaaagaacacgaaattttggcaaaaagaggtg 24626627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24620760 - 24621088
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcc---tagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagca 333  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  24620760 agaggtgcaacacaaggacttcccaggaggtcacccatccanctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgca 24620859  T
Q  334 ttagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaa 419  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               |||    
T  24620860 ttagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaa 24620958  T
Q  420 ttaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaa 519  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24620959 ttaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaa 24621057  T
Q  520 agagaacacgaaattttggcaaaaagaggtg 550  Q
    | |||||||||||||||||||||||||||||    
T  24621058 aaagaacacgaaattttggcaaaaagaggtg 24621088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24621082 - 24621411
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24621082 agaggtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24621181  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24621182 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24621280  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24621281 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24621379  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24621380 aaaagaacacgaaattttggcaaaaagaggtg 24621411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24625655 - 24625984
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcc----tagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24625655 agaggtgcaacacaaggacttcccaggaggtcacccatccancctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24625754  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24625755 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24625853  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24625854 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24625952  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24625953 aaaagaacacgaaattttggcaaaaagaggtg 24625984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24636266 - 24636595
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24636266 agaggtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24636365  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24636366 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24636464  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24636465 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24636563  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24636564 aaaagaacacgaaattttggcaaaaagaggtg 24636595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24637514 - 24637843
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatccta----gtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24637514 agaggtgcaacacaaggacttcccaggaggtcacccatcctacctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24637613  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24637614 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24637712  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24637713 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24637811  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24637812 aaaagaacacgaaattttggcaaaaagaggtg 24637843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24639764 - 24640093
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcc----tagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24639764 agaggtgcaacacaaggacttcccaggaggtcacccatccnncctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24639863  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24639864 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24639962  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24639963 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24640061  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24640062 aaaagaacacgaaattttggcaaaaagaggtg 24640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24639441 - 24639770
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24639441 agaggtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24639540  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24639541 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24639639  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24639640 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacnctaattaaca 24639738  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24639739 aaaagaacacgaaattttggcaaaaagaggtg 24639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24625978 - 24626304
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24625978 agaggtgcaaaacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24626077  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttc-aaaaaagacg--------------ctaatt 421  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||               |||||    
T  24626078 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttttaa-tttatttttcaaaaaaagacgtcaaactacgctaattaatt 24626176  T
Q  422 aactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaag 521  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24626177 aactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaa 24626275  T
Q  522 agaacacgaaattttggcaaaaagaggtg 550  Q
    |||||| ||||||||||||||||||||||    
T  24626276 agaacaggaaattttggcaaaaagaggtg 24626304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 237 - 543
Target Start/End: Original strand, 24635565 - 24635887
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24635565 agaggtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24635664  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24635665 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24635763  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24635764 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24635862  T
Q  519 aagagaacacgaaattttggcaaaa 543  Q
    || ||||||||||||||||||||||    
T  24635863 aaaagaacacgaaattttggcaaaa 24635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24636589 - 24636918
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24636589 agaggtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24636688  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||               ||    
T  24636689 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatgtttcaaaaaagacgtcaaactacgctaatta 24636787  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24636788 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattaccctaattaaca 24636886  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24636887 aaaagaacacgaaattttggcaaaaagaggtg 24636918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 24635242 - 24635571
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    |||||||||||||||||||||||| |||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24635242 agaggtgcaacacaaggacttcccnggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24635341  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||               ||    
T  24635342 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcanttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24635440  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24635441 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacnctaattaaca 24635539  T
Q  519 aagagaacacgaaattttggcaaaaagaggtg 550  Q
    || |||||||||||||||||||||||||||||    
T  24635540 aaaagaacacgaaattttggcaaaaagaggtg 24635571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 237 - 535
Target Start/End: Original strand, 24637837 - 24638150
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggcc----aagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||| ||    
T  24637837 agaggtgcaaaacaaggacttcccaggaggtcacccatcctagtactactctcggccgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24637936  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24637937 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24638035  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 518  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24638036 attaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaaca 24638134  T
Q  519 aagagaacacgaaattt 535  Q
    || || |||||||||||    
T  24638135 aaaag-acacgaaattt 24638150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24622331 - 24622562
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24622331 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24622430  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24622431 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24622529  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24622530 actaatagagtgttaggtagcgtaaattaacgg 24622562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24622615 - 24622846
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24622615 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24622714  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24622715 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24622813  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24622814 actaatagagtgttaggtagcgtaaattaacgg 24622846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24631998 - 24632229
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24631998 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24632097  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24632098 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24632196  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24632197 actaatagagtgttaggtagcgtaaattaacgg 24632229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24632601 - 24632832
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24632601 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24632700  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24632701 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24632799  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24632800 actaatagagtgttaggtagcgtaaattaacgg 24632832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24632885 - 24633116
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24632885 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24632984  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24632985 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24633083  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24633084 actaatagagtgttaggtagcgtaaattaacgg 24633116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24633807 - 24634038
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24633807 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24633906  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24633907 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24634005  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24634006 actaatagagtgttaggtagcgtaaattaacgg 24634038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24623218 - 24623449
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24623218 agaggtgcaacacaaggacttcccaggaggtcacccatcctagnactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24623317  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24623318 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24623416  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24623417 actaatagagtgttaggtagcgtaaattaacgg 24623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24627228 - 24627459
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24627228 agaggtgcaacacaaggacttcccaggaggtcacccatcctagnactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24627327  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24627328 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24627426  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24627427 actaatagagtgttaggtagcgtaaattaacgg 24627459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24631111 - 24631342
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24631111 agaggtgcaacacaaggacttcccangaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24631210  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24631211 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24631309  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24631310 actaatagagtgttaggtagcgtaaattaacgg 24631342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 237 - 415
Target Start/End: Original strand, 24634694 - 24634871
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24634694 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24634793  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg 415  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24634794 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacg 24634871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24624733 - 24624964
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||    
T  24624733 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccgctgcatta 24624832  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24624833 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24624931  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24624932 actaatagagtgttaggtagcgtaaattaacgg 24624964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24634410 - 24634641
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24634410 agaggtgcaacacaaggacttcccaggaggtcacccatcctagcactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24634509  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24634510 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24634608  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24634609 actaatagagtgttaggtagcgtaaattaacgg 24634641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24631714 - 24631945
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24631714 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24631813  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaatta 422  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||    
T  24631814 gtgcnggtatgatcgcacctgagagtaaancgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaatta 24631912  T
Q  423 actaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||    
T  24631913 actaatagagtgttaggtagcgtaaattaacgg 24631945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24623821 - 24624051
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24623821 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24623920  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaa---------aaaagacgc----taattaa 423  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||         |||  ||||    |||||||    
T  24623921 gtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaagacgtcaaactacgctaattaattaa 24624019  T
Q  424 ctaatagagtgttaggtagcgtaaattaacgg 455  Q
    ||||||||||||||||||||||||||||||||    
T  24624020 ctaatagagtgttaggtagcgtaaattaacgg 24624051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24621405 - 24621640
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcc----tagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24621405 agaggtgcaacacaaggacttcccaggaggtcacccatccnncctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24621504  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24621505 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24621603  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||||||    
T  24621604 attaactaatagagtgttaggtagcgtaaattaacgg 24621640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 237 - 455
Target Start/End: Original strand, 24626621 - 24626856
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatccta----gtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24626621 agaggtgcaacacaaggacttcccaggaggtcacccatcctacctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24626720  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------cta 418  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||    
T  24626721 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaatta 24626819  T
Q  419 attaactaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||||||||||||||||||||||||||||||    
T  24626820 attaactaatagagtgttaggtagcgtaaattaacgg 24626856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 237 - 410
Target Start/End: Original strand, 24639092 - 24639263
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24639092 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24639191  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaa 410  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  24639192 gtgctggtatgatcgcacctgagagtaaagcgttgt-attgtatatatgcatttctaa-tttatttttcaaaaa 24639263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 316 - 550
Target Start/End: Original strand, 24637274 - 24637520
Alignment:
Q  316 ctgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg 415  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  24637274 ctgatgggatccggtgcattagtgctggtatgatcgcac-tgagagtaaagcgttgtaattgtatatatgcatttctaatttattttttcaaaaaagacg 24637372  T
Q  416 c--------------taattaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaa 501  Q
                   |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  24637373 tcaaactacgctaattaattaactaatagagtgttaggtagcgtaaattaacggaaaaaa-tgaaatacaatcgaagtttatttttcaaaaacgacgtaa 24637471  T
Q  502 aattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24637472 aattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24637520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 237 - 393
Target Start/End: Original strand, 24627512 - 24627668
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24627512 agaggtgcaacacaangacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 24627611  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttcta 393  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  24627612 gtgctggtatgatcgcacctnagagtaaagcgttgtaattgtatatatgcatttcta 24627668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 237 - 410
Target Start/End: Original strand, 24636912 - 24637088
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    |||||||||||||||||||||||| |||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24636912 agaggtgcaacacaaggacttccctggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24637011  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaa 410  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24637012 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcacttctaa-tttatttttcaaaaa 24637088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 237 - 394
Target Start/End: Original strand, 24640087 - 24640248
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccat----cctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  24640087 agaggtgcaacacaaggacttcccaggaggtcacccatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgc 24640186  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaa 394  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24640187 attagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa 24640248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 267 - 455
Target Start/End: Original strand, 24630857 - 24631058
Alignment:
Q  267 tcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaag 366  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24630857 tcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcattagtgctggtatgatcgcacctgagagtaaag 24630956  T
Q  367 cgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacg--------------ctaattaactaatagagtgttaggtagcgtaaattaa 452  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||    
T  24630957 cgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaattaactaatagagtgttaggtagcgtaaattaa 24631055  T
Q  453 cgg 455  Q
    |||    
T  24631056 cgg 24631058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 338 - 550
Target Start/End: Original strand, 24635024 - 24635248
Alignment:
Q  338 tgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacgc--------------taattaa 423  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               |||||||    
T  24635024 tgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaattaa 24635122  T
Q  424 ctaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaagag 523  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  24635123 ctaatagagtgttaggtagcgtaaattaacggaaaaaa-tgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattaccctaattaacaaaaag 24635221  T
Q  524 aacacgaaattttggcaaaaagaggtg 550  Q
    |||||||||||||||||||||||||||    
T  24635222 aacacgaaattttggcaaaaagaggtg 24635248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 334 - 550
Target Start/End: Original strand, 24636046 - 24636272
Alignment:
Q  334 ttagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacgc--------------taa 419  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||               |||    
T  24636046 ttagtgctggtatgatcgcac-tgagagtaaagcgt-gtaattgtatatatgcatttctaa-tttatttttcaaaaaagacgtcaaactacgctaattaa 24636142  T
Q  420 ttaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaa 519  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24636143 ttaactaatagagtgttaggtagcgtaaattaacggaaaaaa-tgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattaccctaattaacaa 24636241  T
Q  520 agagaacacgaaattttggcaaaaagaggtg 550  Q
    | |||||||||||||||||||||||||||||    
T  24636242 aaagaacacgaaattttggcaaaaagaggtg 24636272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 237 - 356
Target Start/End: Original strand, 3348060 - 3348179
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  3348060 agaggtgcaacacaaggacttcctaggaggtcacccatcctagtactactctcgtccaagcacgcttaactgcggagttctgatgggatccggtgcatta 3348159  T
Q  337 gtgctggtatgatcgcacct 356  Q
    | |||||||||| |||||||    
T  3348160 gcgctggtatgaccgcacct 3348179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 423 - 550
Target Start/End: Original strand, 24638334 - 24638460
Alignment:
Q  423 actaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaga 522  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24638334 actaatagagtgttaggtagcgtaaattaacggaaaaaa-tgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaaaa 24638432  T
Q  523 gaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||    
T  24638433 gaacacgaaattttggcaaaaagaggtg 24638460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 417 - 550
Target Start/End: Original strand, 24619487 - 24619618
Alignment:
Q  417 taattaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaa 516  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24619487 taattaactaatagagtgttaggtagcgtaaattaacggaaaaaa-tgaaatacaatcgaagtttatttt-caaaaacgacgtaaaattacgctaattaa 24619584  T
Q  517 caaagagaacacgaaattttggcaaaaagaggtg 550  Q
    |||| |||||||||||||||||||||||||||||    
T  24619585 caaaaagaacacgaaattttggcaaaaagaggtg 24619618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 417 - 550
Target Start/End: Original strand, 24620635 - 24620766
Alignment:
Q  417 taattaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaa 516  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24620635 taattaactaatagagtgttaggtagcgtaaattaacggaaaaaa-tgaaatacaatcgaagtttatttt-caaaaacgacgtaaaattacgctaattaa 24620732  T
Q  517 caaagagaacacgaaattttggcaaaaagaggtg 550  Q
    |||| |||||||||||||||||||||||||||||    
T  24620733 caaaaagaacacgaaattttggcaaaaagaggtg 24620766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 307 - 455
Target Start/End: Original strand, 24624201 - 24624361
Alignment:
Q  307 tgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttca 406  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  24624201 tgcggagttctgatggg-tccggtgcattagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa-tttatttttca 24624298  T
Q  407 aaaaagacg--------------ctaattaactaatagagtgttaggtagcgtaaattaacgg 455  Q
    |||||||||               |||||||||||||||||||||||||||||||||||||||    
T  24624299 aaaaagacgtcaaactacgctaattaattaactaatagagtgttaggtagcgtaaattaacgg 24624361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 320
Target Start/End: Original strand, 24619612 - 24619698
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcc---tagtactactctcggccaagcacgcttaactgcggagttctgat 320  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||    
T  24619612 agaggtgcaacacaaggacttcccaggaggtcacccatccanctagtactactctcgcccaagcacgcttaactgcggagttctgat 24619698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 550
Target Start/End: Original strand, 24639375 - 24639447
Alignment:
Q  477 agtttatttttcaaaaacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24639375 agtttatttttcaaaa-cgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24639447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24621641 - 24621699
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24621641 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24621699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24622563 - 24622621
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24622563 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24622621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24622847 - 24622905
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24622847 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24622905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24623450 - 24623508
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24623450 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24623508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24624362 - 24624420
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24624362 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24624420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24624965 - 24625023
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24624965 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24625023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24626857 - 24626915
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24626857 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24627460 - 24627518
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24627460 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24627518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24631059 - 24631117
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24631059 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24631117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24631343 - 24631401
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24631343 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24631401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24631946 - 24632004
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24631946 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24632230 - 24632288
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24632230 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24632288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24632833 - 24632891
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24632833 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24632891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24633117 - 24633175
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24633117 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24633175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24634039 - 24634097
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24634039 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 24634642 - 24634700
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24634642 aacgacgtaaaattacgctaattaacaaaaagaacacgaaattttggcaaaaagaggtg 24634700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 542
Target Start/End: Original strand, 24624052 - 24624100
Alignment:
Q  492 aacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaa 542  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  24624052 aacgacgtaaaat-acgctaattaacaaa-agaacacgaaattttggcaaa 24624100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 24634887 - 24634919
Alignment:
Q  417 taattaactaatagagtgttaggtagcgtaaat 449  Q
    |||||||||||||||||||||||||||||||||    
T  24634887 taattaactaatagagtgttaggtagcgtaaat 24634919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 32352412 - 32352335
Alignment:
Q  231 ggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactg 308  Q
    |||| |||||||||||||||| |||||   |  ||||||||||||||| ||| ||| ||| ||||||| |||||||||    
T  32352412 ggtgagagaggtgcaacacaaagactttttaaaaggtcacccatcctaataccactttcgtccaagcatgcttaactg 32352335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 38802330 - 38802395
Alignment:
Q  261 aggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||| |||| ||| ||||||||| | |||| ||||||||||||| | ||| ||||||||||    
T  38802330 aggaggtcatccatactattactactcttgtccaaacacgcttaactgcagtgttttgatgggatc 38802395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 237 - 550
Target Start/End: Original strand, 16477086 - 16477408
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||||    
T  16477086 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttgactgcagagttctgatgggatccggtgcatta 16477185  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagac----------gctaattaacta 426  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||| |    
T  16477186 gtgctggtatgatcgcacctgagaataaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacgtcaaactaagctaattaacga 16477285  T
Q  427 atagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaagagaac 526  Q
    ||||||| |||||| ||||||||||||||       ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  16477286 atagagttttaggttgcgtaaattaacgg-aagaaatgaaatacaatcgaagtttattttttaaaaacgatgtaaaattacgctaattaacaaaaagaac 16477384  T
Q  527 acgaaattttggcaaaaagaggtg 550  Q
    | ||||||||||||||||||||||    
T  16477385 aagaaattttggcaaaaagaggtg 16477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 1786660 - 1786957
Alignment:
Q  1 tcaatctttattaacatcttaaacacattgagtataatgcttagaattgccataaagttgacagaattatatgatgacaccgtgattttgttaaaaatgt 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  1786660 tcaatctttattaacatcttaaacaaattgagtacaatgcttagaattgccataaagttgacagaattatatgatgacaccttgattttgttaaaattgt 1786759  T
Q  101 gataccgtaattttgtcaaattcactagtaatcgaaacatatat--taatttgcggttttggtacaacatgacatgtagattaataattgtggtaaaaga 198  Q
    |||| || ||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||| |||||||| ||||||||||||||||||||||||     
T  1786760 gatatcgaaattttgtcaaattcactagtaatcgaaacatatatactaatttttggttttggtacgacatgacacgtagattaataattgtggtaaaagg 1786859  T
Q  199 agtcttgtgttagnnnnnnnggttacaaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaag 296  Q
    |||||||||||||       ||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||| |||||    
T  1786860 agtcttgtgttagtttttttggttacacaaagggtgggagaggtgcaacacaaagacttaccagaaggtcacccatcctaatactactctcgtccaag 1786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 296 - 505
Target Start/End: Original strand, 16476715 - 16476936
Alignment:
Q  296 gcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaag 395  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  16476715 gcacgcttaactgcggagttctgatgggatccggtgcattagtgctggtatgatcgcacctgagagtaaagcgttgtaattgtatatatgcatttctaa- 16476813  T
Q  396 tttatttttcaaaaaagacg--------------ctaattaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagttt 481  Q
    ||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  16476814 tttatttttcaaaaaagacgtcaaactacgctaattaattaactaatagagtgttaggtagcgtaaattaacgg-aaaaaatgaaatacaatcgaagttt 16476912  T
Q  482 atttttcaaaaacgacgtaaaatt 505  Q
    ||||||||||||||||||||||||    
T  16476913 atttttcaaaaacgacgtaaaatt 16476936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 334
Target Start/End: Complemental strand, 18860114 - 18860011
Alignment:
Q  231 ggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccgga 330  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||     
T  18860114 ggtgggagaggtgcaacacaaggactttccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcagagttctgatgggatccggt 18860015  T
Q  331 gcat 334  Q
    ||||    
T  18860014 gcat 18860011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 231 - 356
Target Start/End: Complemental strand, 15052412 - 15052287
Alignment:
Q  231 ggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccgga 330  Q
    |||||||||||||||||||||| ||||| || ||| ||| |||| ||||||| | | ||| |||| |||| |||||||| |||||||||||||||| |      
T  15052412 ggtgggagaggtgcaacacaagaacttctcatgagatcatccattctagtaccattttcgtccaaacacgtttaactgcagagttctgatgggatctgat 15052313  T
Q  331 gcattagtgctggtatgatcgcacct 356  Q
    | |||| |||||||||||||||||||    
T  15052312 gtattactgctggtatgatcgcacct 15052287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 495 - 550
Target Start/End: Original strand, 16477037 - 16477092
Alignment:
Q  495 gacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16477037 gacgtaaaattacgctaattaacaaaaagaacaagaaattttggcaaaaagaggtg 16477092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 237 - 550
Target Start/End: Complemental strand, 21825824 - 21825502
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||||    
T  21825824 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttgactgcagagttctgatgggatccggtgcatta 21825725  T
Q  337 gtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagac----------gctaattaacta 426  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||| |    
T  21825724 gtgctggtatgatcgcacctgagaataaagcgttgtaattgtatatatgcatttctaagtttatttttcaaaaaagacgtcaaactaagctaattaacga 21825625  T
Q  427 atagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatcgaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaagagaac 526  Q
    ||||||| |||||| ||||||||||||||       ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  21825624 atagagttttaggttgcgtaaattaacgg-aagaaatgaaatacaatcgaagtttattttttaaaaacgatgtaaaattacgctaattaacaaaaagaac 21825526  T
Q  527 acgaaattttggcaaaaagaggtg 550  Q
    | ||||||||||||||||||||||    
T  21825525 aagaaattttggcaaaaagaggtg 21825502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 385 - 550
Target Start/End: Complemental strand, 21825992 - 21825818
Alignment:
Q  385 gcatttctaagtttatttttcaaaaaagacgc----------taattaactaatagagtgttaggtagcgtaaattaacggnnnnnnntgaaatacaatc 474  Q
    |||||||||||||||||||||||||||||||           |||||||| |||||||| |||||| ||||||||||||||       ||||||||||||    
T  21825992 gcatttctaagtttatttttcaaaaaagacgtcaaaataagataattaacgaatagagttttaggttgcgtaaattaacggaagaaa-tgaaatacaatc 21825894  T
Q  475 gaagtttatttttcaaaaacgacgtaaaattacgctaattaacaaagagaacacgaaattttggcaaaaagaggtg 550  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21825893 gaagtttattttttaaaaacgacgtaaaattacgctaattaacaaaaagaacaagaaattttggcaaaaagaggtg 21825818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 236 - 356
Target Start/End: Original strand, 25904730 - 25904850
Alignment:
Q  236 gagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatt 335  Q
    |||||||||||||||||||||| |||  |||||| ||||| || ||||||||||| ||||  |||||||||||||||||||||||||||||||| |||||    
T  25904730 gagaggtgcaacacaaggactttccaaaaggtcatccatcttaatactactctcgtccaaatacgcttaactgcggagttctgatgggatccggtgcatt 25904829  T
Q  336 agtgctggtatgatcgcacct 356  Q
    |||||||||||||||||||||    
T  25904830 agtgctggtatgatcgcacct 25904850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 3153513 - 3153603
Alignment:
Q  267 tcacccatccta-gtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacct 356  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3153513 tcacccatcctaagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcattagtgctggtatgatcgcacct 3153603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 21827482 - 21827423
Alignment:
Q  331 gcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcattt 390  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  21827482 gcattagtgctggtatgatcgcacccgagagtaaagcgttgtaattgtatatatgcattt 21827423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12177328 - 12177488
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12177328 aaaaatggtgggagaggtgcaatacaaggacttcccaggtggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatggga 12177427  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| ||||||||||||||||||||||||||||  ||||  || | ||||||||||||||    
T  12177428 tccggtgcattagtgctggtatgatcgcacctgaatgtaatacgctctaattgtatatatg 12177488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 227 - 383
Target Start/End: Original strand, 12182047 - 12182203
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  12182047 aaagggtgggagaggttaaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcagagttctgatgggatc 12182146  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatata 383  Q
    ||| |||||||||||| ||||||||||||||| |||||  || | ||||||||||||    
T  12182147 cggtgcattagtgctgatatgatcgcacctgaaagtaatacgctctaattgtatata 12182203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 292 - 415
Target Start/End: Original strand, 52268734 - 52268857
Alignment:
Q  292 ccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatgcatttc 391  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  52268734 ccaagcacgcttaactgcggagttctgatgggatccggtgcattagtgctggtatgatcgcatctgagagtaaagcgttgtaattgtatatatgcatttc 52268833  T
Q  392 taagtttatttttcaaaaaagacg 415  Q
    ||||||||||||||||||||||||    
T  52268834 taagtttatttttcaaaaaagacg 52268857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12172765 - 12172923
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12172765 aaagggtgggagaggttcaatacaaggactacccaggaggtcatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatc 12172864  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| ||||||||||||||||||||||||||||  ||||  || | ||||||||||||||    
T  12172865 cggtgcattagtgctggtatgatcgcacctgaatgtaatacgctctaattgtatatatg 12172923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12174115 - 12174273
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12174115 aaagggtgggagaggttaaacacaaggactttccaggaggtcatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatc 12174214  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| ||||||||||||||||||||||||||||  ||||  || | ||||||||||||||    
T  12174215 cggtgcattagtgctggtatgatcgcacctgaatgtaatacgctctaattgtatatatg 12174273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12174781 - 12174939
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    |||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12174781 aaagggtgggagaggttcaacacaaggactacccaggagatcatccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatc 12174880  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| ||||||||||||||||||||||||||||  ||||  || | ||||||||||||||    
T  12174881 cggtgcattagtgctggtatgatcgcacctgaatgtaatacgctctaattgtatatatg 12174939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12180473 - 12180631
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  12180473 aaagggtgggagaggttaaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcagagttctaatgggatc 12180572  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| |||||||||||| ||||||||||||||| |||||  || | ||||||||||||||    
T  12180573 cggtgcattagtgctgatatgatcgcacctgaaagtaatacgctctaattgtatatatg 12180631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12183950 - 12184108
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  12183950 aaagggtgggagaggttaaacacaaggacttccaaggaggtcacccatcctagtactactctcgtccaagcacgcgtaactgcggagttctgatgggatc 12184049  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| |||||||||||| ||||||||||||||| |||||  || | ||||||||||||||    
T  12184050 cggtgcattagtgctgatatgatcgcacctgaaagtaatacgctctaattgtatatatg 12184108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12189283 - 12189443
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  12189283 aaaaatggtgggagaggtgcaacacaaggacttcccaggaggtcatccatcctagtactactctcgcccaagcacaattaactgcggagttctgatggga 12189382  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| ||||||||| |||||||||| ||||||| |||||  || | ||||||||||||||    
T  12189383 tccggtgcattagtgatggtatgatcacacctgaaagtaatacgctctaattgtatatatg 12189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12184954 - 12185114
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  12184954 aaaaatggtgggagaggtgcaacaaaaggacctcccaggaggccacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatggga 12185053  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| |||||||||||||||||||||||||||| |||||  || |  |||||||||||||    
T  12185054 tccggtgcattagtgctggtatgatcgcacctgaaagtaatacgctcaaattgtatatatg 12185114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12185298 - 12185458
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||    
T  12185298 aaaaatggtgggagaggtgcaacacaaggacttcctaggaggacacccatccttgtactactctcgcccaagcacgcttaattgctgagttctgatggga 12185397  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| |||||||||||||||||||||||||||| |||||  || | ||| ||||||||||    
T  12185398 tccggtgcattagtgctggtatgatcgcacctgaaagtaatacgctctaaatgtatatatg 12185458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12186946 - 12187106
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  12186946 aaaaatggtgggagaggtgcaacaaaaggacctcccaggaggccacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatggga 12187045  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| |||||||||||||||||||||||||||| |||||  || |  |||||||||||||    
T  12187046 tccggtgcattagtgctggtatgatcgcacctgaaagtaatacgctcaaattgtatatatg 12187106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12178567 - 12178725
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12178567 aaagggtgggagaggttaaacacaaggacttcccaggaggacacccatcatagtactactctcgcccaagcacgcttaactgcggagttctgatgggatc 12178666  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| |||||||||||| |||| |||||||||| |||||  ||   ||||||||||||||    
T  12178667 cggtgcattagtgctgatatggtcgcacctgaaagtaatacgccctaattgtatatatg 12178725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12180811 - 12180969
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  12180811 aaagcgtgggagaggtgcaacacaaggactttccaggaggtcacccatcctagtactactctcgcccaagaacgcttaactgcggagttctaatgggatc 12180910  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||  ||||||||||||||||||| ||||||||  ||||  || | ||||||||||||||    
T  12180911 cgatgcattagtgctggtatgattgcacctgaacgtaatacgctctaattgtatatatg 12180969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12187290 - 12187450
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| ||| |||||||||||||     
T  12187290 aaaaatggtgggagaggtgcaacacaaggacttcctaggaggacacccatccttgtactactctcgcccaagcacgcttaattgctgagttctgatgggc 12187389  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| |||||||||||||||||||||||||||| |||||  || | ||| ||||||||||    
T  12187390 tccggtgcattagtgctggtatgatcgcacctgaaagtaatacgctctaaatgtatatatg 12187450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 358
Target Start/End: Original strand, 12175124 - 12175254
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  12175124 aaagggtgggagaggttaaacacaaggacttcccaggag-tcatccatcctagtactactcccgcccaagcacgcttaactgcggagttctgatgggatc 12175222  T
Q  327 cggagcattagtgctggtatgatcgcacctga 358  Q
    ||| ||||||||||||||||||||||||||||    
T  12175223 cggtgcattagtgctggtatgatcgcacctga 12175254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 234 - 385
Target Start/End: Original strand, 12188949 - 12189100
Alignment:
Q  234 gggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagca 333  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||| |||    
T  12188949 gggagaggtgcaacacaagaacttcccaggaggtcacccatcctagaactactctcgcccaagcacaattaactgcggagttctgatgggatccggtgca 12189048  T
Q  334 ttagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    |||||||||||||||||||||||   |||||  || | ||||||||||||||    
T  12189049 ttagtgctggtatgatcgcacctataagtaatacgctttaattgtatatatg 12189100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12170057 - 12170215
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  12170057 aaaggatgggagaggtgcaacacaaggacttcccaagaggtcacccatcatagtactactctcgccctagcacgcttaactgcagagttctgatgggatc 12170156  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| |||| ||||||||||||| ||||||||| |||||   | | ||||||||||||||    
T  12170157 cggtgcatcagtgctggtatgaacgcacctgagagtaatatgctctaattgtatatatg 12170215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12173774 - 12173932
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||    
T  12173774 aaagggtgggagaggttaaacacaaggactttccaggaggtcatccatcctagtactactcccgcccaagcacgcttaactgtggagttttgatgggatc 12173873  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
     || ||||||||||| ||||||||||||||||  ||||  |||||||||||||||||||    
T  12173874 tggtgcattagtgctagtatgatcgcacctgaatgtaatacgttgtaattgtatatatg 12173932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 12182722 - 12182872
Alignment:
Q  235 ggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcat 334  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||    
T  12182722 ggagaggttcaacacaaggacttcccaggaggtcatccatccaagtactactctcgcccaagaacgcttaactgcggagttctaatgggatccggtgcat 12182821  T
Q  335 tagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    |||||||| |||||||||||||||  ||||  |||| || |||||||||||    
T  12182822 tagtgctgatatgatcgcacctgaacgtaatacgttctagttgtatatatg 12182872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12186603 - 12186763
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||||| |||| ||| |||||||||||| |    
T  12186603 aaaaatggtgggagaggtgcaacacaaggacttctcaggaggacacccatcctcgtactactctcgcccaagcacggttaattgctgagttctgatggaa 12186702  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| |||||||||||||||||||| ||||||| |||||  || | ||| ||||||||||    
T  12186703 tccggtgcattagtgctggtatgatcacacctgaaagtaatacgctctaaatgtatatatg 12186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12188597 - 12188757
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||||| |||| ||| |||||||||||| |    
T  12188597 aaaaatggtgggagaggtgcaacacaaggacttctcaggaggacacccatcctcgtactactctcgcccaagcacggttaattgctgagttctgatggaa 12188696  T
Q  325 tccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||| |||||||||||||||||||| ||||||| |||||  || | ||| ||||||||||    
T  12188697 tccggtgcattagtgctggtatgatcacacctgaaagtaatacgctctaaatgtatatatg 12188757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 227 - 358
Target Start/End: Original strand, 12179234 - 12179365
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    |||| ||||||||||| |||||||||||||||||||||||||| |||||  ||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  12179234 aaagcgtgggagaggttcaacacaaggacttcccaggaggtcatccatcaaagtactactctcgcccaagaacgcttaactgcggagttctaatgggatc 12179333  T
Q  327 cggagcattagtgctggtatgatcgcacctga 358  Q
    ||| ||||||||| ||||||||||||||||||    
T  12179334 cggtgcattagtgttggtatgatcgcacctga 12179365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 12184614 - 12184741
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  12184614 aaagcgtgagagaggtgcaacacaaggactttccaggaggtcacccatcctggtactactctcgcccaagcacgcttaactgcggagttctgattggatc 12184713  T
Q  327 cggagcattagtgctggtatgatcgcac 354  Q
    ||| |||||||| || ||||||||||||    
T  12184714 cggtgcattagtacttgtatgatcgcac 12184741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 12173433 - 12173591
Alignment:
Q  227 aaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatc 326  Q
    |||||||||||||||| || |||||||||| |||||||| ||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  12173433 aaagggtgggagaggttcagcacaaggactacccaggagatcatccatcctagtactactctcgcccaaacacgcttaactgcggcgttctgatgggatc 12173532  T
Q  327 cggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| ||||||||||||||||||| || |||||  ||||  || | ||||||||||||||    
T  12173533 cggtgcattagtgctggtatgattgcgcctgaatgtaatacgctctaattgtatatatg 12173591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 233 - 385
Target Start/End: Original strand, 12169474 - 12169626
Alignment:
Q  233 tgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagc 332  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||  ||| || ||    
T  12169474 tgggagaggtgcaacacaaggacttcccaaaaggtcacccatcctagaactactctcgcccaagcacgcttaactacggagttctgatgaaatctggtgc 12169573  T
Q  333 attagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||||||||||| |||| ||||||| |||||  || | ||||| ||||||||    
T  12169574 attagtgctggtacgatcacacctgagagtaatacgctctaattatatatatg 12169626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 12170367 - 12170509
Alignment:
Q  243 gcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctg 342  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| || |||| |||||||    
T  12170367 gcaacacaatgacttcctaggaggtcacccatcatagtactactctcgccctagcacccttaactgcggagttctgatgggatctggtgcatcagtgctg 12170466  T
Q  343 gtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    |||||| ||||||||| |||||  || | ||||||||||||||    
T  12170467 gtatgaacgcacctgagagtaatacgctctaattgtatatatg 12170509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 244 - 385
Target Start/End: Original strand, 12169779 - 12169920
Alignment:
Q  244 caacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctgg 343  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  12169779 caacacaatgacttcccaggaggtcacccatcatagtactactctcgccctagcacgcttaactgtggagttctgatgggatccggtgcatcagtgctgg 12169878  T
Q  344 tatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| | || |||||| |||||  || | ||||||||||||||    
T  12169879 tataaacgaacctgagagtaatacgctctaattgtatatatg 12169920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 225 - 385
Target Start/End: Original strand, 12176985 - 12177146
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccag--gaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgg 322  Q
    ||||| |||||||||||||||||| |||||||||||    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  12176985 aaaaatggtgggagaggtgcaacaaaaggacttccccctagaggtcacccatcctagtactactctcgtccaagcacgcttaattgcggagttctaatgg 12177084  T
Q  323 gatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||| ||| ||||||||| |||||||||| ||||||| |||||  |  | ||||||||||||||    
T  12177085 gat-cggtgcattagtgttggtatgatcacacctgaaagtaatacactctaattgtatatatg 12177146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 12170661 - 12170803
Alignment:
Q  243 gcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctg 342  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||| |||||||| |||||||| ||||||||||| |||| |||||||    
T  12170661 gcaacacaatgacttcccaggaggtcacccatcatagtactactctcgccctagcacacttaactgtggagttcttatgggatccggtgcatcagtgctg 12170760  T
Q  343 gtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    |||||| ||||||||| |||||   | | ||||||||||||||    
T  12170761 gtatgaacgcacctgagagtaatatgctctaattgtatatatg 12170803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 12186297 - 12186392
Alignment:
Q  263 gaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctga 358  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| || |||||||||||| |||||||||||||||    
T  12186297 gaggacacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatgggatctggtgcattagtgctgatatgatcgcacctga 12186392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 12188291 - 12188386
Alignment:
Q  263 gaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctga 358  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| || |||||||||||| |||||||||||||||    
T  12188291 gaggacacccatcctagtactactctcgcccaagcacgcttaattgctgagttctgatgggatctggtgcattagtgctgatatgatcgcacctga 12188386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 12189627 - 12189702
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacg 300  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12189627 aaaaatggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagcacg 12189702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 12170987 - 12171111
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| || ||||||||||||||  |||||||||| |||||||||||| |||||||| || ||||| | ||| |||||||| ||||||||||| ||||||    
T  12170987 aaaaatggagggagaggtgcaactaaaggacttcctaggaggtcacccgtcctagtattattctcgccaaagtacgcttaagtgcggagttctaatggga 12171086  T
Q  325 tccggagcattagtgctggtatgat 349  Q
    ||||| ||||||||| |||||||||    
T  12171087 tccggtgcattagtgttggtatgat 12171111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 4374979 - 4375094
Alignment:
Q  238 gaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattag 337  Q
    ||||||||||||||||| |||| |||| ||||| ||||||| |||||||||||  |||||| |||||||||| |||||||||||  |||||  |||||||    
T  4374979 gaggtgcaacacaaggatttcctaggaagtcacacatcctattactactctcgcacaagcatgcttaactgcagagttctgatgatatccgatgcattag 4375078  T
Q  338 tgctggtatgatcgca 353  Q
    ||||||||||||||||    
T  4375079 tgctggtatgatcgca 4375094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 12178908 - 12178979
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaag 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12178908 aaaaatggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaag 12178979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 12184292 - 12184363
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaag 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12184292 aaaaatggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcgcccaag 12184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 12172438 - 12172511
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagca 298  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12172438 aaaaacggtgggagaggtgcaatacaaggacttcccaggaggtcacccatcctagtactactctcgcccaagca 12172511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 12182388 - 12182459
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaag 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  12182388 aaaaatggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtcctactctcgcccaag 12182459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 12169151 - 12169216
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcg 290  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12169151 aaaaaaggtgggagaggtgcaatacaaggacttcccaggaggtcacccatcctagtactactctcg 12169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 12173104 - 12173177
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagca 298  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  12173104 aaaaatggtgggagatgtgcaatacaaggacttcctaggaggtcacccatcctagtactactctcgcccaagca 12173177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 12174454 - 12174527
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagca 298  Q
    ||||| ||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  12174454 aaaaatggtgggagatgtgcaatacaaggacttcctaggacgtcacccatcctagtactactctcgcccaagca 12174527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 19156169 - 19156257
Alignment:
Q  297 cacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    |||||||||||||| ||||||||| |||| ||| ||||||||| |||||||||||||| ||| |||||  || | ||||||||||||||    
T  19156169 cacgcttaactgcgaagttctgataggattcggtgcattagtgttggtatgatcgcacatgaaagtaatacgctctaattgtatatatg 19156257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 12172512 - 12172580
Alignment:
Q  317 tgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||||||||||| ||||||||| |||||||||||||||| | |||||  || | ||||||||||||||    
T  12172512 tgatgggatccggtgcattagtgttggtatgatcgcacctaaaagtaatacgctctaattgtatatatg 12172580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 12185641 - 12185682
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggagg 266  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  12185641 aaaaatggtgggagaggtgcgacacaaggacttcccaggagg 12185682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 12187633 - 12187674
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggagg 266  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  12187633 aaaaatggtgggagaggtgcgacacaaggacttcccaggagg 12187674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 17817980 - 17817943
Alignment:
Q  229 agggtgggagaggtgcaacacaaggacttcccaggagg 266  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  17817980 agggtgggataggtgcaacacaaggacttcccaggagg 17817943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 19156126 - 19156171
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcac 270  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||    
T  19156126 aaaaatggtgggagaggtgcaacacaaggacttctcatgaggtcac 19156171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 12174528 - 12174596
Alignment:
Q  317 tgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||||||||| | ||||||||| |||||| ||||||||||| |||||  || | ||||||||||||||    
T  12174528 tgatgggatcctgtgcattagtgttggtattatcgcacctgaaagtaatacgctctaattgtatatatg 12174596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 12178982 - 12179050
Alignment:
Q  317 tgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||||||||| | ||||||||| |||||||||||||||||| |||||  |  | ||||||||||||||    
T  12178982 tgatgggatccagtgcattagtgttggtatgatcgcacctgaaagtaatacactctaattgtatatatg 12179050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 12182462 - 12182530
Alignment:
Q  317 tgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||||||||| | ||||||||| |||||||||||||||||| |||||  |  | ||||||||||||||    
T  12182462 tgatgggatccagtgcattagtgttggtatgatcgcacctgaaagtaatacactctaattgtatatatg 12182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 12184366 - 12184434
Alignment:
Q  317 tgatgggatccggagcattagtgctggtatgatcgcacctgacagtaaagcgttgtaattgtatatatg 385  Q
    ||||||||||| | ||||||||| |||||||||||||| ||| |||||  || | ||||||||||||||    
T  12184366 tgatgggatccagtgcattagtgttggtatgatcgcacatgaaagtaatacgctctaattgtatatatg 12184434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 22377543 - 22377496
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactac 285  Q
    |||||||||||||  | |||||| |||||||||||||||||||||||||    
T  22377543 agaggtgcaacacgggtacttcc-aggaggtcacccatcctagtactac 22377496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1024 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold1024
Description:

Target: scaffold1024; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 112 - 1
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  112 agaggtgcaacacacggacttcccaggaggtcacccatcctagtactactctcgcccaagcacgcttaactgcggagttctgatgggatccggtgcatta 13  T
Q  337 gtgctggtatga 348  Q
    ||||||||||||    
T  12 gtgctggtatga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 245 - 360
Target Start/End: Complemental strand, 16990144 - 16990029
Alignment:
Q  245 aacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggt 344  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||| ||||||||    
T  16990144 aacacaaggacttcccaataggtcactcatcctagtactactctcgcccaagcacgtttaactgcggagttctgatgggatccggtggattggtgctggt 16990045  T
Q  345 atgatcgcacctgaca 360  Q
    ||||||||||| ||||    
T  16990044 atgatcgcacccgaca 16990029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 3732763 - 3732646
Alignment:
Q  239 aggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagt 338  Q
    |||||||||||||||||||   | ||||||||||||  |||||||||| ||| ||||| |||||||||||||||||||||||  ||||||| ||||||||    
T  3732763 aggtgcaacacaaggacttttgaagaggtcacccattttagtactactttcgcccaagtacgcttaactgcggagttctgatcagatccggtgcattagt 3732664  T
Q  339 gctggtatgatcgcacct 356  Q
    || |||||||||||||||    
T  3732663 gccggtatgatcgcacct 3732646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 14903217 - 14903155
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcac 299  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  14903217 agaggtgcaacacaaggacttttcaggaggtcacccatcctagtactactctcgcccaagcac 14903155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 30729418 - 30729485
Alignment:
Q  241 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactg 308  Q
    ||||||||||| |||||  ||| ||||||||||||||| | |||||||||  |||||||| |||||||    
T  30729418 gtgcaacacaatgacttttcagaaggtcacccatcctaatgctactctcgttcaagcacgtttaactg 30729485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 7e-29; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 2557949 - 2557869
Alignment:
Q  241 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgg 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  2557949 gtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaaacacgcttaactgcaga-ttctgatgg 2557869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 37857140 - 37857251
Alignment:
Q  238 gaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattag 337  Q
    |||||| |||| |||||||| |  |||||||| ||||  ||||||||||||||  ||  ||||||||||||| || |||| ||| ||||||| ||||||     
T  37857140 gaggtgaaacataaggactttcttggaggtcatccatt-tagtactactctcgctcatacacgcttaactgcagatttcttatgagatccggtgcattaa 37857238  T
Q  338 tgctggtatgatc 350  Q
    ||||| |||||||    
T  37857239 tgctgatatgatc 37857251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 12891610 - 12891645
Alignment:
Q  239 aggtgcaacacaaggacttcccaggaggtcacccat 274  Q
    |||||||||||||||||||||||| |||||||||||    
T  12891610 aggtgcaacacaaggacttcccagaaggtcacccat 12891645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 44836797 - 44836703
Alignment:
Q  261 aggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacc 355  Q
    |||||||||||||||||| ||| ||||||| |||| || | ||||||||| | ||||||||||||| ||  ||||||||||||||||||||||||    
T  44836797 aggaggtcacccatcctaatacaactctcgcccaaacatgtttaactgcgaaattctgatgggatctggtacattagtgctggtatgatcgcacc 44836703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 38737386 - 38737326
Alignment:
Q  295 agcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacc 355  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  38737386 agcacgcttagctgcgtagttctgatgggatccgaagcattagtgctggtatgatcgcacc 38737326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 38737447 - 38737387
Alignment:
Q  295 agcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcacc 355  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  38737447 agcacgcttagctgcgtagttctgatgggatccgaagcattagtgctggtatgatcgcacc 38737387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 44174763 - 44174813
Alignment:
Q  306 ctgcggagttctgatgggatccggagcattagtgctggtatgatcgcacct 356  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  44174763 ctgcggagttctgatggaatcaggtgcattagtgctggtatgatcgcacct 44174813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 354
Target Start/End: Original strand, 31261059 - 31261120
Alignment:
Q  293 caagcacgcttaactgcggagttctgatgggatccggagcattagtgctggtatgatcgcac 354  Q
    |||||||| |||||||| ||||||||||| |||||||  |||||||| || |||||||||||    
T  31261059 caagcacgtttaactgcagagttctgatgagatccggtacattagtgttgatatgatcgcac 31261120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 3669586 - 3669649
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgc 301  Q
    |||||||||| || ||||||||| |||||||||| ||||||||||||||| | | ||||||||||    
T  3669586 agaggtgcaataccaggacttcc-aggaggtcactcatcctagtactactgttgtccaagcacgc 3669649  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 8874195 - 8874255
Alignment:
Q  268 cacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccg 328  Q
    |||||||| || ||||||||||  |||| ||| ||||||||| ||||||||||| ||||||    
T  8874195 cacccatcttaatactactctcatccaaacacacttaactgcagagttctgatgagatccg 8874255  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 42435297 - 42435349
Alignment:
Q  226 aaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatccta 278  Q
    |||| |||||||||||||||||||||||| ||||||  | ||||| |||||||    
T  42435297 aaaatggtgggagaggtgcaacacaaggatttcccataacgtcactcatccta 42435349  T

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Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 24724671 - 24724780
Alignment:
Q  239 aggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcattagt 338  Q
    ||||||||||||||||||| ||| ||||| |||| | ||| || |||||||| |||||||| ||||| ||| ||||||||||  ||||||| |||||| |    
T  24724671 aggtgcaacacaaggactttccacgaggttacccgttctaatattactctcgcccaagcacacttaattgcagagttctgatacgatccggtgcattaat 24724770  T
Q  339 gctggtatga 348  Q
    ||||||||||    
T  24724771 gctggtatga 24724780  T

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Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 38136746 - 38136613
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatggga 324  Q
    ||||| |||| ||||||||||||| ||||||||  |||||||||||  ||| | |||||| | ||| ||||||||| ||||||||| |||||||||| ||    
T  38136746 aaaaatggtgagagaggtgcaacataaggacttttcaggaggtcacgaatcttggtactattttcgcccaagcacgtttaactgcgaagttctgatgaga 38136647  T
Q  325 tccggagcattagtgctggtatgatcgcacctga 358  Q
    |||||  ||||| |  |||||||||| |||||||    
T  38136646 tccggtacattaatattggtatgatcacacctga 38136613  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 13642566 - 13642504
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctc 289  Q
    ||||||||||| |||  ||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  13642566 aaaaagggtggaaga--tgcaacacaaggatttcccatgaggtcacccatcttagtactactctc 13642504  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 13742963 - 13742916
Alignment:
Q  242 tgcaacacaaggacttcccaggaggtcacccatcctagtactactctc 289  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  13742963 tgcaacacgaggacttcccatgaggtcacccatcttagtactactctc 13742916  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 15246337 - 15246388
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactct 288  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  15246337 agaggtgcaacacaaggacttttcaggaggtcacctatcctagtactgctct 15246388  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 10814333 - 10814391
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaa 295  Q
    ||||||||||||||||||| ||  |||||| ||| | ||||||||||||||||| ||||    
T  10814333 agaggtgcaacacaaggacgtctgaggagggcactcgtcctagtactactctcgtccaa 10814391  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 36249459 - 36249414
Alignment:
Q  225 aaaaagggtgggagaggtgcaacacaaggacttcccaggaggtcac 270  Q
    |||||||||||||||| ||||||||||| |||||  ||||||||||    
T  36249459 aaaaagggtgggagagatgcaacacaagaacttcttaggaggtcac 36249414  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 262
Target Start/End: Original strand, 38580338 - 38580367
Alignment:
Q  233 tgggagaggtgcaacacaaggacttcccag 262  Q
    ||||||||||||||||||||||||||||||    
T  38580338 tgggagaggtgcaacacaaggacttcccag 38580367  T

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Target: scaffold0050 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 65284 - 65163
Alignment:
Q  237 agaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaactgcggagttctgatgggatccggagcatta 336  Q
    ||||||||||||||| |||||  |||||||||||||||| ||||| || | ||| | ||  |||||||| ||||||||||||||||||| | | ||| ||    
T  65284 agaggtgcaacacaaagacttttcaggaggtcacccatcttagtattattttcgtctaaatacgcttaattgcggagttctgatgggattcagtgcaata 65185  T
Q  337 gtgctggtatgatcgcacctga 358  Q
     |  ||||||||||||||||||    
T  65184 attatggtatgatcgcacctga 65163  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 31384 - 31311
Alignment:
Q  233 tgggagaggtgcaacacaaggacttcccaggaggtcacccatcctagtactactctcggccaagcacgcttaact 307  Q
    |||||||| ||||||||||||||||  ||| |||||| |||| ||||||| ||||||| | ||||||||||||||    
T  31384 tgggagagatgcaacacaaggacttttcagaaggtcatccat-ctagtaccactctcgtctaagcacgcttaact 31311  T

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