View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8651_low_6 (Length: 498)
Name: NF8651_low_6
Description: NF8651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8651_low_6 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0100 (1 HSPs) |
| | |
|
| [»] scaffold0119 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
| [»] scaffold0385 (1 HSPs) |
| | |
|
| [»] scaffold0187 (2 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 327 - 483
Target Start/End: Original strand, 2230579 - 2230727
Alignment:
| Q |
327 |
ctctttcatcttcaacaaatttgagaaagaaaaagtgagggcgaggaagcgagtcacacaacaacgacttgattaactcagttggattaatggagttttg |
426 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2230579 |
ctctttcatcttcaacaaatttgagaaagaaaaagtgagggcga--------gtcacacaacaacgacttgattaactcggttggattaatggagttttg |
2230670 |
T |
|
| Q |
427 |
tgactcggtgttgtcgtgatggtggtagaaaagagtgaaaataatgaatgatgtatt |
483 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2230671 |
tgacttggtgttgtcgtgatggtggtagaaaagggtgaaaataatgaatgatgtatt |
2230727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 2230425 - 2230529
Alignment:
| Q |
173 |
ttgatctccatatttttggtccttcttcactcggttctcgtacaaactcatcgatgccatcctctagcccgaaaattcccttcactttccactctgcata |
272 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2230425 |
ttgatctccatatttttggtccttcttcactcggttctcgtacaaattcatcgatgccatcctctagcccgaaaattcccttcactttccactctgcata |
2230524 |
T |
|
| Q |
273 |
tatct |
277 |
Q |
| |
|
||||| |
|
|
| T |
2230525 |
tatct |
2230529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 32473388 - 32473498
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
32473388 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaac |
32473487 |
T |
|
| Q |
110 |
atttttcaaat |
120 |
Q |
| |
|
||||| ||||| |
|
|
| T |
32473488 |
attttccaaat |
32473498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 17208180 - 17208076
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
17208180 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaac |
17208081 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
17208080 |
atttt |
17208076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 30622713 - 30622816
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
30622713 |
gagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatgg-gcttacaatagggtgtatgattaaaggatgttcatgtaac |
30622811 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
30622812 |
atttt |
30622816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 5257094 - 5256995
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| |||| |||||| |||||||||||||| |
|
|
| T |
5257094 |
aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc |
5256995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 2614650 - 2614747
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
2614650 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
2614747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 38470678 - 38470581
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| || || ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||| |||||||||||| |
|
|
| T |
38470678 |
aagataaagtgtgattgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt |
38470581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 7617232 - 7617135
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||| ||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
7617232 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacatttt |
7617135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 22512404 - 22512307
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| |||| || |||||||||||||||||||||||| |
|
|
| T |
22512404 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt |
22512307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 41334664 - 41334761
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||| ||| | ||||||| |||||||||||||||||||||||| |
|
|
| T |
41334664 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacatttt |
41334761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 18034081 - 18033984
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||| | ||||||||| |||| || |||||||||||||||||||||||| |
|
|
| T |
18034081 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt |
18033984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 33801568 - 33801471
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||||| ||||||||| | |||| | |||||| ||||||||||||||||| |
|
|
| T |
33801568 |
aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacatttt |
33801471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 2230366 - 2230408
Alignment:
| Q |
117 |
aaattaaaaataggttcaaaagcacacttgatttctctatttt |
159 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
2230366 |
aaattaaaaataggctcaaaagtacacttgatttctctatttt |
2230408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 25915003 - 25915090
Alignment:
| Q |
31 |
ttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttcaaa |
119 |
Q |
| |
|
|||||||||||| ||| ||||||| || ||| ||| | ||||||||| | |||| || ||||||||||||||||||||||||||||| |
|
|
| T |
25915003 |
ttatgagatgaacctacaaaaatattct-aatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttcaaa |
25915090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 39122434 - 39122524
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaa |
108 |
Q |
| |
|
|||| ||||| | ||| |||||||||||||||||||||| | |||| ||||| |||| ||| ||||||||| |||| ||||||||||||| |
|
|
| T |
39122434 |
aagataaagtgtagttgtgagatgaatttaccaaaatattcctaatacatgg-gtgtctaattagatgtatgaataaaaggtgttcatgtaa |
39122524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 33855071 - 33855141
Alignment:
| Q |
44 |
ttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||| | | |||| ||||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
33855071 |
ttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt |
33855141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 48119734 - 48119630
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
48119734 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
48119635 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
48119634 |
atttt |
48119630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 35003400 - 35003291
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
35003400 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
35003301 |
T |
|
| Q |
110 |
atttttcaaa |
119 |
Q |
| |
|
||||| |||| |
|
|
| T |
35003300 |
attttccaaa |
35003291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 38336024 - 38335920
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
38336024 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaac |
38335925 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
38335924 |
atttt |
38335920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 46168489 - 46168385
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
46168489 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaac |
46168390 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
46168389 |
atttt |
46168385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 45639726 - 45639830
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
45639726 |
gagatgaaagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaac |
45639825 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
45639826 |
atttt |
45639830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 38113189 - 38113305
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||| |||||||||| | |||||||||||||||||||||| |||| |
|
|
| T |
38113189 |
gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataac |
38113288 |
T |
|
| Q |
110 |
atttttcaaattaaaaa |
126 |
Q |
| |
|
||||| | ||||||||| |
|
|
| T |
38113289 |
attttcctaattaaaaa |
38113305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 44112783 - 44112679
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
44112783 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
44112684 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
44112683 |
atttt |
44112679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 45705931 - 45705827
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
45705931 |
gagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataac |
45705832 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
45705831 |
atttt |
45705827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 45427739 - 45427843
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| | |||||||||||| ||| |||||||||| |
|
|
| T |
45427739 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaac |
45427838 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
45427839 |
atttt |
45427843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 26585568 - 26585464
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
26585568 |
gagatgaaagagaaagtatgattgcgagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaac |
26585469 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
26585468 |
atttt |
26585464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 41065259 - 41065155
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||| | | ||||||||||||||||||||||||||| |
|
|
| T |
41065259 |
gagaggaaagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaac |
41065160 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
41065159 |
atttt |
41065155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 37814877 - 37814780
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
37814877 |
aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacatttt |
37814780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 35000107 - 35000211
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |||||| ||| |||| |||| || ||||||| |||||||||||| |||||||||||||| |
|
|
| T |
35000107 |
gagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaac |
35000206 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
35000207 |
atttt |
35000211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 43571087 - 43571189
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| | |||| || |||||||||||||||||||||||| | |
|
|
| T |
43571087 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc |
43571186 |
T |
|
| Q |
117 |
aaa |
119 |
Q |
| |
|
||| |
|
|
| T |
43571187 |
aaa |
43571189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 5489875 - 5489778
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
5489875 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
5489778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 2497568 - 2497662
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||||||||| |||| ||||||||| |||||||| |||| |||||| |||||||||||||| |
|
|
| T |
2497568 |
aaagtgtggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttttc |
2497662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 7447924 - 7447823
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| ||||||||| |||| ||||| ||||||||| |||||| || |||||| ||||||||||||||||||| |
|
|
| T |
7447924 |
aagataaagtgtggttgtgagatgaacttatcaaaatatctgtaatacatgg-gtgtacaatgggatgtaggaataaaggatgttcatgtaacatttttc |
7447826 |
T |
|
| Q |
117 |
aaa |
119 |
Q |
| |
|
||| |
|
|
| T |
7447825 |
aaa |
7447823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 14427404 - 14427349
Alignment:
| Q |
59 |
taatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||||||| |||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
14427404 |
taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt |
14427349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 23989524 - 23989622
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatga-tgtatg-attaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| |||||| ||||||||||||||||| |||| ||| | || |||||| ||| |||||| || ||||||||||||||||||||||| |
|
|
| T |
23989524 |
aagataaagtgtggttgtgagataaatttaccaaaatatccctaatacatagggtatacaat-tgagtgtatgaataaaagggtgttcatgtaacatttt |
23989622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 750306 - 750403
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||| |||||||||| | || ||||| ||||||||| | |||| || ||||||||||| |||||||||| |
|
|
| T |
750306 |
aagataaagtgtggttttgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacatttt |
750403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 48498963 - 48499060
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| |||| | ||||| |||||||||||||||||| |
|
|
| T |
48498963 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt |
48499060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 4401427 - 4401366
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaat |
78 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
4401427 |
aagataaagtgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaat |
4401366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 35)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 17619146 - 17619250
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||| |
|
|
| T |
17619146 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaac |
17619245 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
17619246 |
atttt |
17619250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 712066 - 711962
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
712066 |
gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
711967 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
711966 |
atttt |
711962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 55272370 - 55272474
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
55272370 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaac |
55272469 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
55272470 |
atttt |
55272474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 38851619 - 38851510
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||| ||||||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
38851619 |
gagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaac |
38851520 |
T |
|
| Q |
110 |
atttttcaaa |
119 |
Q |
| |
|
|||||||||| |
|
|
| T |
38851519 |
atttttcaaa |
38851510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 32728463 - 32728359
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| |||||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
32728463 |
gagatgaaagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaac |
32728364 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
32728363 |
atttt |
32728359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 3756242 - 3756346
Alignment:
| Q |
11 |
agatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaaca |
110 |
Q |
| |
|
|||||||||| |||||||| || |||||| ||||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
3756242 |
agatgaaaga-aaagtatgattgtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaaca |
3756340 |
T |
|
| Q |
111 |
tttttc |
116 |
Q |
| |
|
|||||| |
|
|
| T |
3756341 |
tttttc |
3756346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 35037111 - 35037005
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||| ||||||||| |
|
|
| T |
35037111 |
gagaagaaagaaaaaatatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaac |
35037012 |
T |
|
| Q |
110 |
atttttc |
116 |
Q |
| |
|
||||||| |
|
|
| T |
35037011 |
atttttc |
35037005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 960864 - 960968
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||||||||||||| ||| ||||| || | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
960864 |
gagatgaaagagaaagtacgattataagatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaac |
960963 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
960964 |
atttt |
960968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 28988572 - 28988475
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||| ||| || ||||||| ||||||||| | ||||||| |||||||||||||||||||||||| |
|
|
| T |
28988572 |
aagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacatttt |
28988475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 46827700 - 46827804
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||| |||| || |||||| |||||||||||| | |||||||||| | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
46827700 |
gagatgaaagagaaaatatgtttgtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaac |
46827799 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
46827800 |
atttt |
46827804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 48435573 - 48435673
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||||| || ||| |||||||||| |||||||||| | ||| |||||||| |||||||||||||| |
|
|
| T |
48435573 |
gagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaac |
48435672 |
T |
|
| Q |
110 |
a |
110 |
Q |
| |
|
| |
|
|
| T |
48435673 |
a |
48435673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 33703240 - 33703143
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||||| |||||| | |||||||||||||||||||||||| |
|
|
| T |
33703240 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacatttt |
33703143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 27893843 - 27893942
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| |||| |||||| |||||||||||||| |
|
|
| T |
27893843 |
aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc |
27893942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 49229684 - 49229762
Alignment:
| Q |
36 |
agatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||| ||||||| ||||||||| |
|
|
| T |
49229684 |
agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacatttt |
49229762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 27864658 - 27864566
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| |||| |||||| |||||||||||| |
|
|
| T |
27864658 |
aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt |
27864566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 55966358 - 55966444
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||| ||||| |||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
55966358 |
tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacatttt |
55966444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 27316714 - 27316811
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||| ||| | |||| || |||||||||||| | ||||||||| |
|
|
| T |
27316714 |
aagataaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacatttt |
27316811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 48463456 - 48463548
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||||||| |||| |||||| |||||||||||| |
|
|
| T |
48463456 |
aaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacatttt |
48463548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 19880060 - 19879991
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaata |
79 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| ||| |||| |||| |||||||||| |
|
|
| T |
19880060 |
gagatgaaagagaaagtatgattgtgagatgaatttaccaaaatgtccataatatatggggtgtacaata |
19879991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 35017831 - 35017735
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| || | ||||| ||||||||| ||| || || |||||||||||||||||||||||| |
|
|
| T |
35017831 |
aagataaagtgtggttgtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacatttt |
35017735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 41878505 - 41878408
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||||| || ||||| ||||||||| ||| |||||||||| ||||| || | ||||||||| | ||||||| ||||| |||||||||||||||||| |
|
|
| T |
41878505 |
aagagaaggtttggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacatttt |
41878408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 1771278 - 1771364
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||||||| ||| ||||||||| |||| ||||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
1771278 |
tggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt |
1771364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 41327544 - 41327646
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||||||||| ||| | |||||||||||||||||||| ||| || ||||| ||||||||| | ||| ||| |||||||||| |||||||||||||| |
|
|
| T |
41327544 |
aagagaaagtgtggatgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttttc |
41327643 |
T |
|
| Q |
117 |
aaa |
119 |
Q |
| |
|
||| |
|
|
| T |
41327644 |
aaa |
41327646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 28982835 - 28982920
Alignment:
| Q |
29 |
ggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||||||| |||||||||||||| |||| |||| ||||||||| | |||| | |||||||||||||||||||||||| |
|
|
| T |
28982835 |
ggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacatttt |
28982920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 31681001 - 31680896
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| | || ||||||||| |||||||| |||| |||||| | |||||||||||| |
|
|
| T |
31681001 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttttc |
31680902 |
T |
|
| Q |
117 |
aaatta |
122 |
Q |
| |
|
||||| |
|
|
| T |
31680901 |
taatta |
31680896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 43949802 - 43949903
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatg-attaaagggtgttcatgtaacattttt |
115 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| | || | | || |||||||||||||||| ||||||| |
|
|
| T |
43949802 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcattttt |
43949901 |
T |
|
| Q |
116 |
ca |
117 |
Q |
| |
|
|| |
|
|
| T |
43949902 |
ca |
43949903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 45490314 - 45490411
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| ||| ||||| |||| |||| ||||||||| ||||||| | |||| |||||||||||||||||| |
|
|
| T |
45490314 |
aagataaagtgtggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacatttt |
45490411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 43514698 - 43514786
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
||||| ||||||||| ||||||||||| || |||| |||| ||||||||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
43514698 |
tggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttttc |
43514786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 39631200 - 39631097
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatg-attaaagggtgttcatgtaacattttt |
115 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| | |||| | || |||||| ||||||||| ||||||| |
|
|
| T |
39631200 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcattttt |
39631101 |
T |
|
| Q |
116 |
caaa |
119 |
Q |
| |
|
|||| |
|
|
| T |
39631100 |
caaa |
39631097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 23036079 - 23035982
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| || | |||||||||| | |||| || |||||| |||||||||||||||| |
|
|
| T |
23036079 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacatttt |
23035982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 25051792 - 25051695
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| || || ||||||||| |||||||||||||| |||| ||| | ||||||||| | |||| || ||||| |||||||||| ||||||| |
|
|
| T |
25051792 |
aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacatttt |
25051695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 41848070 - 41847973
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||| ||||| || ||||||||| ||||||| || |||||||||| ||||||||| | ||| ||| ||||| ||||| ||||||||||| |
|
|
| T |
41848070 |
aagagaaagtgtggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacatttt |
41847973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 23204779 - 23204875
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacattt |
113 |
Q |
| |
|
|||| ||||| ||||| ||| ||||| |||| ||||||||| |||| ||| | |||||||| |||||| || ||||| ||||||||||||||||| |
|
|
| T |
23204779 |
aagataaagtgtggttgtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt |
23204875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 36004110 - 36004162
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaat |
62 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |||||| ||| |||| |
|
|
| T |
36004110 |
gagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaat |
36004162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 43735841 - 43735741
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| || || ||||||||| ||| ||||||||| |||| ||||| |||| ||| |||||| || |||||| ||||||||||| ||||||| |
|
|
| T |
43735841 |
aagataaagtgtgattgtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttttc |
43735742 |
T |
|
| Q |
117 |
a |
117 |
Q |
| |
|
| |
|
|
| T |
43735741 |
a |
43735741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 31513393 - 31513284
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
31513393 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaac |
31513294 |
T |
|
| Q |
110 |
atttttcaaa |
119 |
Q |
| |
|
||||| |||| |
|
|
| T |
31513293 |
attttccaaa |
31513284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 31408627 - 31408731
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31408627 |
gagatgaaagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaac |
31408726 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
31408727 |
atttt |
31408731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 40237025 - 40236921
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
40237025 |
gagatgaaagagaaaatatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaac |
40236926 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
40236925 |
atttt |
40236921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 10573848 - 10573748
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||||| | |||| ||||| |||||||||| ||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10573848 |
aagataaagtgtggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttttc |
10573749 |
T |
|
| Q |
117 |
a |
117 |
Q |
| |
|
| |
|
|
| T |
10573748 |
a |
10573748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 27535225 - 27535329
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| |||||||||| || |||| ||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27535225 |
gagatgaaagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaac |
27535324 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
27535325 |
atttt |
27535329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 33384977 - 33384872
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaata-tgatgtatgattaaagggtgttcatgtaa |
108 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| ||| |||||||||| || ||||||| | |||||||||||| | ||||||||||| |
|
|
| T |
33384977 |
gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaa |
33384878 |
T |
|
| Q |
109 |
catttt |
114 |
Q |
| |
|
|||||| |
|
|
| T |
33384877 |
catttt |
33384872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 42538432 - 42538534
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| | |
|
|
| T |
42538432 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc |
42538531 |
T |
|
| Q |
117 |
aaa |
119 |
Q |
| |
|
||| |
|
|
| T |
42538532 |
aaa |
42538534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 24001013 - 24001110
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
24001013 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
24001110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 4638200 - 4638299
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatga-tgtatgattaaagggtgttcatgtaacattttt |
115 |
Q |
| |
|
|||| ||||||||||| ||||||||| |||||||||||||| |||| |||| ||||||||| ||| ||||||| |||| |||||||||||||||||||| |
|
|
| T |
4638200 |
aagataaagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaat-tgagtgtatgaataaaaggtgttcatgtaacattttt |
4638298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 9216389 - 9216304
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||||||| ||||||||||||| |||||||||| |||||||||| ||| || || |||||||||||||||||||||||| |
|
|
| T |
9216389 |
tggttgtgagatgaacttaccaaaatatctctaatgcatgg-gtgtacaataggatataggaataaagggtgttcatgtaacatttt |
9216304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 44326272 - 44326178
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| |||| ||| ||||||||| ||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
44326272 |
aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttc |
44326178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 44416935 - 44417037
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| |||||||||| |||| ||||| |||||||||| | |||| | |||| | ||||||||||||||||||| |
|
|
| T |
44416935 |
aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttttc |
44417034 |
T |
|
| Q |
117 |
aaa |
119 |
Q |
| |
|
||| |
|
|
| T |
44417035 |
aaa |
44417037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 5194232 - 5194329
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| |||| || || ||||||||||||| |||||||||||||| ||| | ||||||||| | ||||||| |||| ||||||||||||||||||| |
|
|
| T |
5194232 |
aagagtaagtgtgattgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacatttt |
5194329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 24280597 - 24280694
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||| || || |||||||||||||||||||||| || ||||||| |||| |||| | ||||||| ||||||||||||| |||||||||| |
|
|
| T |
24280597 |
aagagaaagtgtgattgtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacatttt |
24280694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 35069820 - 35069723
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| | |||| || ||||| |||||||||||||||||| |
|
|
| T |
35069820 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacatttt |
35069723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 39998475 - 39998410
Alignment:
| Q |
49 |
aaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||||||| |||| ||||| |||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
39998475 |
aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacatttt |
39998410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 45326119 - 45326026
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaaca |
110 |
Q |
| |
|
|||| ||||| || || ||||||||| |||||||||||||| |||| |||| ||||||||| |||||||||| |||| |||||| |||||||| |
|
|
| T |
45326119 |
aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaaca |
45326026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 26898408 - 26898499
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacattt |
113 |
Q |
| |
|
||||| ||||| | ||||||| |||||||||||||| |||| ||||| |||||||| | ||||||| |||| |||||||||||||||||| |
|
|
| T |
26898408 |
aaagtgtggttgtaagatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt |
26898499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 43343625 - 43343724
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| |||||||||| |||| ||||| |||||||||| | |||| | |||| | ||||||||||||||||||| |
|
|
| T |
43343625 |
aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttttc |
43343724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 43317542 - 43317445
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| |||| || || ||||||||||||| |||||||||| ||| |||| | |||||||| | ||||||| |||| ||||||||||||||||||| |
|
|
| T |
43317542 |
aagagtaagtgtgattgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacatttt |
43317445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 5810925 - 5811027
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| |||||||||| |||| || | ||||||||| | |||| || ||||||||| |||||||||||||| | |
|
|
| T |
5810925 |
aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc |
5811024 |
T |
|
| Q |
117 |
aaa |
119 |
Q |
| |
|
||| |
|
|
| T |
5811025 |
aaa |
5811027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 5015494 - 5015397
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| |||| | ||||| |||||||||||||||||| |
|
|
| T |
5015494 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt |
5015397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 32029818 - 32029879
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaat |
78 |
Q |
| |
|
|||| ||||| ||||| | |||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
32029818 |
aagataaagtgtggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaat |
32029879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 16180358 - 16180456
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||||| |||| | ||| ||||||||| | |||| || |||| |||||| |||||||||||||| |
|
|
| T |
16180358 |
aagataaagtgtggttgtgagatgaatttaccaaaatatttataatacgtggggtgtacaat-gggtgtaggaataaatggtgttgatgtaacatttttc |
16180456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 42972940 - 42972854
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||| |||| ||||||||| |||| || |||||| |||||| |||||||||| |
|
|
| T |
42972940 |
tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacatttt |
42972854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 45713 - 45821
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
45713 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaac |
45812 |
T |
|
| Q |
110 |
atttttcaa |
118 |
Q |
| |
|
||||||||| |
|
|
| T |
45813 |
atttttcaa |
45821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 81; Significance: 6e-38; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 27441648 - 27441540
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
27441648 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaac |
27441549 |
T |
|
| Q |
110 |
atttttcaa |
118 |
Q |
| |
|
||||||||| |
|
|
| T |
27441548 |
atttttcaa |
27441540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 33242509 - 33242405
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||| |||||||||| | |||||||||||| |||||||||||||| |
|
|
| T |
33242509 |
gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaac |
33242410 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
33242409 |
atttt |
33242405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 3213499 - 3213402
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
3213499 |
aagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacatttt |
3213402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 33254013 - 33253915
Alignment:
| Q |
16 |
aaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||| || ||| |||||||||| |||||||||| | ||| |||||||| ||||||||||||||||||| |
|
|
| T |
33254013 |
aaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacatttt |
33253915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 13743222 - 13743319
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| |||| ||||||||||||||||||| |
|
|
| T |
13743222 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacatttt |
13743319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 13748722 - 13748819
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| |||| ||||||||||||||||||| |
|
|
| T |
13748722 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacatttt |
13748819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 31109216 - 31109320
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||| | |||| | || |||||||| |||||||||| || ||||||| ||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
31109216 |
gagatgaaagagaaaatgtggtcgtaagttgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaac |
31109315 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
31109316 |
atttt |
31109320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 24203993 - 24204088
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttca |
117 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||||| | |||| || |||| |||||||||||||||||||||| |
|
|
| T |
24203993 |
aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttttca |
24204088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 9698334 - 9698431
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
9698334 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
9698431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 21293678 - 21293775
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||| | |||||||| ||||||||||| |||||||||||| |
|
|
| T |
21293678 |
aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacatttt |
21293775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 7273336 - 7273433
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| || || ||||||||| ||||||||||||| |||| ||||| |||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
7273336 |
aagataaagtgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacatttt |
7273433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 26670010 - 26670107
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
26670010 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt |
26670107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 30014442 - 30014345
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||||||||| ||||||||| |||||||||||| | |||| ||||| |||| ||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
30014442 |
aagataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacatttt |
30014345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 21280028 - 21279931
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||||||| |||| ||||| ||| |||| ||||| | |||||||||||||||||||||||| |
|
|
| T |
21280028 |
aagataaagtgtggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacatttt |
21279931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 26466898 - 26466801
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||||||||||| || |||| ||||| ||||||||| | |||| || ||||||||||| |||||||||||| |
|
|
| T |
26466898 |
aagataaagtgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacatttt |
26466801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 7292846 - 7292749
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||| ||| | ||||||| |||| ||||||| ||||||||||| |
|
|
| T |
7292846 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacatttt |
7292749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 7367643 - 7367551
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||| | ||||||| |||| | ||||||| ||||||||| |
|
|
| T |
7367643 |
aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacatttt |
7367551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 30736081 - 30735982
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| || || ||||||||| ||||||||||||| |||| |||| ||||||||| | |||| || |||| |||||||||||||||||||| |
|
|
| T |
30736081 |
aagataaagtgtgattgtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttttc |
30735982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 10457886 - 10457990
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||| |
|
|
| T |
10457886 |
gagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaac |
10457985 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
10457986 |
atttt |
10457990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 25996374 - 25996270
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25996374 |
gagatgaaagagaaaatatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaac |
25996275 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
25996274 |
atttt |
25996270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 52627972 - 52628075
Alignment:
| Q |
11 |
agatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaaca |
110 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
52627972 |
agatgaaagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaaca |
52628071 |
T |
|
| Q |
111 |
tttt |
114 |
Q |
| |
|
|||| |
|
|
| T |
52628072 |
tttt |
52628075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 9434230 - 9434126
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9434230 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaac |
9434131 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
9434130 |
atttt |
9434126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 4190259 - 4190363
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
4190259 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
4190358 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
4190359 |
atttt |
4190363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 34791935 - 34791831
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| ||||| ||| ||||||||| || ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
34791935 |
gagatgaaagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaac |
34791836 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
34791835 |
atttt |
34791831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 51757699 - 51757595
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||| ||||| ||| ||||||||| |||||||||| | ||||||||||||||||||| |||||| |
|
|
| T |
51757699 |
gagatgaaagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaat |
51757600 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
51757599 |
atttt |
51757595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 46941152 - 46941055
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
46941152 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt |
46941055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 45126934 - 45127026
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
45126934 |
aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt |
45127026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 54237195 - 54237098
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
54237195 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
54237098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 42100776 - 42100690
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
42100776 |
tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt |
42100690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 42394420 - 42394517
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
42394420 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt |
42394517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 51249407 - 51249357
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatg |
67 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
51249407 |
aagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatg |
51249357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 40808964 - 40808867
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| | |||| || |||| |||||| |||||||||||| |
|
|
| T |
40808964 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacatttt |
40808867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 27748662 - 27748563
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||||| ||| ||||||||| |||||||||||||| |||| ||| ||||| ||| | ||||||| |||| ||||||||||||||||||||| |
|
|
| T |
27748662 |
aagataaagtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttttc |
27748563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 24688403 - 24688500
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
24688403 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacatttt |
24688500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 25413780 - 25413683
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
25413780 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt |
25413683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 36150229 - 36150132
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| | || ||| | ||||| ||| | ||||||| |||||||| ||||||||||||||| |
|
|
| T |
36150229 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacatttt |
36150132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 40480848 - 40480751
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | |||||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
40480848 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacatttt |
40480751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 47191027 - 47191123
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| ||||||||| |||| ||||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
47191027 |
aagataaagtgtggttgtgagatgaacttatcaaaatatctctaatacatgg-gtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt |
47191123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 54246149 - 54246246
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| |||||||| |||| ||| | ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
54246149 |
aagataaagtgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt |
54246246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 53581859 - 53581958
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| |||||||||| |||| ||| | |||||||| ||||||| ||||| |||||||||||||||||||| |
|
|
| T |
53581859 |
aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttttc |
53581958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 29558252 - 29558330
Alignment:
| Q |
34 |
tgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatt |
112 |
Q |
| |
|
||||||||||||||||| |||| | |||| || | ||||||||| ||||||||| |||||||||||||| ||||||| |
|
|
| T |
29558252 |
tgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacatt |
29558330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 53273684 - 53273746
Alignment:
| Q |
16 |
aaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaat |
78 |
Q |
| |
|
||||| ||||||||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |
|
|
| T |
53273684 |
aaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaat |
53273746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 24)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 35181622 - 35181518
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
35181622 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
35181523 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
35181522 |
atttt |
35181518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 34304894 - 34304790
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
34304894 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaac |
34304795 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
34304794 |
atttt |
34304790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 16603620 - 16603724
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||| ||||| |||| | |||||||||||||||||| |||||||| |
|
|
| T |
16603620 |
gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaac |
16603719 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
16603720 |
atttt |
16603724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 18066712 - 18066816
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||| ||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18066712 |
gagatgaaagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaac |
18066811 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
18066812 |
atttt |
18066816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 16358827 - 16358932
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttc-atgtaa |
108 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||| | |||||||||||||||| ||| |||||| |
|
|
| T |
16358827 |
gagatgaaaaagaaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaa |
16358926 |
T |
|
| Q |
109 |
catttt |
114 |
Q |
| |
|
|||||| |
|
|
| T |
16358927 |
catttt |
16358932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 33629987 - 33630093
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| |||| ||||| ||| |||||||| | ||||||||| | |||||||||||||||||||| |||||| |
|
|
| T |
33629987 |
gagatgaaagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaac |
33630086 |
T |
|
| Q |
110 |
atttttc |
116 |
Q |
| |
|
||||||| |
|
|
| T |
33630087 |
atttttc |
33630093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 29800951 - 29801050
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| ||||||||| |||| |||||| |||||||||||||| |
|
|
| T |
29800951 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc |
29801050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 42295294 - 42295195
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| ||||||||| | |||| || |||||||||||||||||||||||||| |
|
|
| T |
42295294 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttc |
42295195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 11582865 - 11582768
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
11582865 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
11582768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 36743484 - 36743581
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
36743484 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt |
36743581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 26125734 - 26125634
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||| |||||||||||||| |
|
|
| T |
26125734 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttttc |
26125635 |
T |
|
| Q |
117 |
a |
117 |
Q |
| |
|
| |
|
|
| T |
26125634 |
a |
26125634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 20148854 - 20148760
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| |||| ||| ||||||||| ||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
20148854 |
aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttc |
20148760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 19386559 - 19386668
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatg-----gcgtgtacaatatgatgtatgattaaagggtgttcat |
104 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||| ||||| || ||||||||||| | ||| |||| | |||||||||||||||||||||| |
|
|
| T |
19386559 |
gagatgaaagagaaagtatagttgtgagatgaatttatcaaaacattcttaatgcatgaaagagaaagtataatagggtgtatgattaaagggtgttcat |
19386658 |
T |
|
| Q |
105 |
gtaacatttt |
114 |
Q |
| |
|
|||||||||| |
|
|
| T |
19386659 |
gtaacatttt |
19386668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 10678146 - 10678198
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaat |
62 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
10678146 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaat |
10678198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 31384763 - 31384672
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaa |
108 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||| | |||| ||||| |||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
31384763 |
aagataaagtgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaa |
31384672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 5755002 - 5754905
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| |||||||| |||||| || |||| ||||||||||||||||||| |
|
|
| T |
5755002 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacatttt |
5754905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 29705461 - 29705364
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||| |||||||||| |||| ||||| ||||||||| | |||| | |||||||||||||||||||||||| |
|
|
| T |
29705461 |
aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacatttt |
29705364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 30660743 - 30660840
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| | ||||||| |||||||||||||| |||| ||| | ||||||||| |||||| | |||||||||||||||||||||||| |
|
|
| T |
30660743 |
aagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacatttt |
30660840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 30912575 - 30912662
Alignment:
| Q |
29 |
ggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||||||| ||||||||||| || |||| |||| ||||||||| | |||| || |||||||||||||||||||||||||| |
|
|
| T |
30912575 |
ggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttttc |
30912662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 42699351 - 42699248
Alignment:
| Q |
22 |
aaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttcaaatt |
121 |
Q |
| |
|
||||| ||||| ||||||||| |||| ||||||||| |||| ||| ||||||||| | |||| || |||||||||||||||||||||||||| ||| |
|
|
| T |
42699351 |
aaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttttcttatt |
42699252 |
T |
|
| Q |
122 |
aaaa |
125 |
Q |
| |
|
|||| |
|
|
| T |
42699251 |
aaaa |
42699248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 1375641 - 1375544
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| | ||| |||||| ||||||||||||||||| |||| |||| ||||||||| | ||||||| |||| ||||||||||||| ||||| |
|
|
| T |
1375641 |
aagataaagtgtagttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaatttt |
1375544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 2165964 - 2166061
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||||||||||||| |||| ||||| || |||||| | |||| || |||| ||||||||||||| ||||| |
|
|
| T |
2165964 |
aagataaagtgtggttatgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatatttt |
2166061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 42197436 - 42197533
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | |||| |||| | |||| || |||| ||||||||||||||||||| |
|
|
| T |
42197436 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacatttt |
42197533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 45397404 - 45397318
Alignment:
| Q |
28 |
tggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||| ||||||||| |||| ||||||||| |||| ||| | ||||| ||| | |||| || ||||||||||||| |||||||||| |
|
|
| T |
45397404 |
tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacatttt |
45397318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 29)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 41281968 - 41282076
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| |||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
41281968 |
gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
41282067 |
T |
|
| Q |
110 |
atttttcaa |
118 |
Q |
| |
|
||||||||| |
|
|
| T |
41282068 |
atttttcaa |
41282076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 43114663 - 43114559
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
43114663 |
gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
43114564 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
43114563 |
atttt |
43114559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 11825648 - 11825754
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
11825648 |
gagatgaaagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
11825747 |
T |
|
| Q |
110 |
atttttc |
116 |
Q |
| |
|
||||||| |
|
|
| T |
11825748 |
atttttc |
11825754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 966828 - 966932
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||| | |||||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
966828 |
gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
966927 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
966928 |
atttt |
966932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 12415454 - 12415558
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||| || |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
12415454 |
gagatgaaagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaac |
12415553 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
12415554 |
atttt |
12415558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 12427514 - 12427618
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||| || |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
12427514 |
gagatgaaagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaac |
12427613 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
12427614 |
atttt |
12427618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 18491811 - 18491707
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
18491811 |
gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaac |
18491712 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
18491711 |
atttt |
18491707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 16804074 - 16803970
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| |||||| ||| |||||||||| ||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
16804074 |
gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaac |
16803975 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
16803974 |
atttt |
16803970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 16843356 - 16843252
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| |||||| ||| |||||||||| ||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
16843356 |
gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaac |
16843257 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
16843256 |
atttt |
16843252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 4299414 - 4299520
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||| |||||| ||||||| || |||||||||||||||||||| || ||||||||||| |||||||||| | |||||||||||||||||||||| |||| |
|
|
| T |
4299414 |
gagattaaagagtaagtatgattgtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataac |
4299513 |
T |
|
| Q |
110 |
atttttc |
116 |
Q |
| |
|
||||||| |
|
|
| T |
4299514 |
atttttc |
4299520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 4451944 - 4452026
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgatta |
92 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
4451944 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgtacaataagatgtatgatta |
4452026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 43490402 - 43490511
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||| ||||| ||||||||||||||| |||||||||||||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||||||||| |
|
|
| T |
43490402 |
aagataaagtgtggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttttc |
43490501 |
T |
|
| Q |
117 |
aaattaaaaa |
126 |
Q |
| |
|
| ||||||| |
|
|
| T |
43490502 |
tatttaaaaa |
43490511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 34895735 - 34895835
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||||| || ||| |||||||||| |||||||||| | ||| |||||||| |||||||||||||| |
|
|
| T |
34895735 |
gagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaac |
34895834 |
T |
|
| Q |
110 |
a |
110 |
Q |
| |
|
| |
|
|
| T |
34895835 |
a |
34895835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 30838731 - 30838634
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||||| |||||| | |||||||||||||||||||||||| |
|
|
| T |
30838731 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacatttt |
30838634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 14285782 - 14285678
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||| ||||| || | |||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
14285782 |
gagatgaaagagaaagtatgactctgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaat |
14285683 |
T |
|
| Q |
110 |
atttt |
114 |
Q |
| |
|
||||| |
|
|
| T |
14285682 |
atttt |
14285678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 34817777 - 34817874
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| | | || ||||||| ||||||||| | ||| ||| |||||||||||||||||||||||| |
|
|
| T |
34817777 |
aagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacatttt |
34817874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 6518487 - 6518568
Alignment:
| Q |
34 |
tgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
6518487 |
tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttttc |
6518568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 19047256 - 19047159
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
19047256 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt |
19047159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 1750513 - 1750416
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||| | ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
1750513 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt |
1750416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 4764727 - 4764824
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||||| |||| ||||| |||||||||| | |||| || |||| |||||| |||||||||||| |
|
|
| T |
4764727 |
aagataaagtgtggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacatttt |
4764824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 13780736 - 13780833
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||||||||| ||||| |||| ||||||||| | ||| ||| |||| ||||| |||||||||||| |
|
|
| T |
13780736 |
aagagaaagtgtggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacatttt |
13780833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 8896587 - 8896683
Alignment:
| Q |
20 |
agaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
||||||| || || |||||||||||||||||||||| | || || || | ||||||||| |||| ||| |||||||||||||||||||||||||| |
|
|
| T |
8896587 |
agaaagtgtgattgtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttttc |
8896683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 12531657 - 12531744
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggt |
98 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| || |||||| || ||||||||| | |||||||||||||||| |
|
|
| T |
12531657 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaaaa-gcccataatgcttgaggtgtacaattgggtgtatgattaaagggt |
12531744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 12302254 - 12302351
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||| | ||||||||| | |||| | |||||||||||||||||||||||| |
|
|
| T |
12302254 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacatttt |
12302351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 16096846 - 16096749
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| |||||| || | |||||||||||| |||| ||||| ||||| ||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
16096846 |
aagataaagtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacatttt |
16096749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 7070496 - 7070409
Alignment:
| Q |
36 |
agatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttttcaaattaa |
123 |
Q |
| |
|
||||||||||| |||||| ||| ||| |||| | |||||| ||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
7070496 |
agatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacatttttcatattaa |
7070409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 42026865 - 42026769
Alignment:
| Q |
20 |
agaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaa--gggtgttcatgtaacatttt |
114 |
Q |
| |
|
||||||| | ||| |||||||||||| ||||||||||| |||||| || |||||||| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
42026865 |
agaaagtgtagttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacatttt |
42026769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 33229381 - 33229301
Alignment:
| Q |
37 |
gatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatg-attaaagggtgttcatgtaacatttttc |
116 |
Q |
| |
|
|||||| |||||||||||||| |||| ||||| ||||||||| | |||| | || |||||||||||||||| |||||||| |
|
|
| T |
33229381 |
gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttttc |
33229301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 43335764 - 43335861
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| | ||| ||||||||| |||||||||||||| |||| ||||| |||||||| | |||| || |||| | ||||||| ||||||||| |
|
|
| T |
43335764 |
aagataaagtgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacatttt |
43335861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 35450 - 35559
Alignment:
| Q |
10 |
gagatgaaagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaac |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||| |||||||||||| |||||||||||| |||||| ||||||| |
|
|
| T |
35450 |
gagatgaaagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaac |
35549 |
T |
|
| Q |
110 |
atttttcaaa |
119 |
Q |
| |
|
||||| |||| |
|
|
| T |
35550 |
attttccaaa |
35559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 784 - 687
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
784 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt |
687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 112754 - 112657
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| ||| | ||||||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
112754 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt |
112657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0385 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0385
Description:
Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 11350 - 11253
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||||||| | ||||||| ||||| |||||||||| ||||||| |
|
|
| T |
11350 |
aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacatttt |
11253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0187
Description:
Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 14189 - 14286
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||| | |||||||| | |||| | |||||||||||||||||||||||| |
|
|
| T |
14189 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacatttt |
14286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 24517 - 24614
Alignment:
| Q |
17 |
aagagaaagtatggttatgagatgaatttaccaaaatatccttaatgcatggcgtgtacaatatgatgtatgattaaagggtgttcatgtaacatttt |
114 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| ||||||||| |||| ||| | |||||||| | |||| | |||||||||||||||||||||||| |
|
|
| T |
24517 |
aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacatttt |
24614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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